assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475895.1_47972_E02	LS483428	Salmonella enterica strain NCTC10436 genome assembly, chromosome: 1	1	1007603-1008485	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas14j,c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	1	1	1008425-1008456	LS483428.1_1974872-1974841	I-E:I-E:I-E	13,14,14	14	Unclear	cas14j,c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	NA,NA	NA|447aa|up_9|LS483428.1_991996_993337_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|447aa|up_8|LS483428.1_993357_994698_+	TIGR03247, glucar-dehydr, glucarate dehydratase	NA|381aa|up_7|LS483428.1_994775_995918_+	pfam02595, Gly_kinase, Glycerate kinase family	NA|919aa|up_6|LS483428.1_995990_998747_-	PRK11107, PRK11107, hybrid sensory histidine kinase BarA; Provisional	NA|432aa|up_5|LS483428.1_998804_1000100_+	PRK13168, rumA, 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA|745aa|up_4|LS483428.1_1000151_1002386_+	PRK10872, relA, (p)ppGpp synthetase I/GTP pyrophosphokinase; Provisional	NA|264aa|up_3|LS483428.1_1002460_1003252_+	PRK09562, mazG, nucleoside triphosphate pyrophosphohydrolase; Reviewed	NA|546aa|up_2|LS483428.1_1003479_1005117_+	PRK05380, pyrG, CTP synthetase; Validated	NA|433aa|up_1|LS483428.1_1005199_1006498_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_0|LS483428.1_1006634_1007306_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|266aa|down_0|LS483428.1_1008582_1009380_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|down_1|LS483428.1_1009469_1009832_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|down_2|LS483428.1_1010259_1012059_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|down_3|LS483428.1_1012058_1013771_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|down_4|LS483428.1_1013879_1014614_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|down_5|LS483428.1_1014701_1015655_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|674aa|down_6|LS483428.1_1016044_1018066_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|349aa|down_7|LS483428.1_1018981_1020028_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_8|LS483428.1_1020279_1021188_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_9|LS483428.1_1021197_1022637_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional
GCA_900475895.1_47972_E02	LS483428	Salmonella enterica strain NCTC10436 genome assembly, chromosome: 1	2	1018208-1018968	2,2,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3	cas14j,c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	Unclear	GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG,GTGTTCCCCGCGCCAGCGGGGATAAACCG	29,29,29	1	1	1018237-1018268	LS483428.1_1987950-1987981	I-E:I-E:I-E	11,12,12	12	Unclear	cas14j,c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	NA|156aa|up_7|LS483428.1_1007597_1008065_-,NA	NA|433aa|up_9|LS483428.1_1005199_1006498_+	PRK00077, eno, enolase; Provisional	NA|224aa|up_8|LS483428.1_1006634_1007306_+	TIGR04322, organic_radical_activating_enzyme, putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE	NA|156aa|up_7|LS483428.1_1007597_1008065_-	NA	NA|266aa|up_6|LS483428.1_1008582_1009380_+	COG1237, COG1237, Metal-dependent hydrolases of the beta-lactamase superfamily II [General function prediction only]	NA|121aa|up_5|LS483428.1_1009469_1009832_-	cd00470, PTPS, 6-pyruvoyl tetrahydropterin synthase (PTPS)	NA|600aa|up_4|LS483428.1_1010259_1012059_+	PRK10953, cysJ, NADPH-dependent assimilatory sulfite reductase flavoprotein subunit	NA|571aa|up_3|LS483428.1_1012058_1013771_+	PRK13504, PRK13504, NADPH-dependent assimilatory sulfite reductase hemoprotein subunit	NA|245aa|up_2|LS483428.1_1013879_1014614_+	PRK02090, PRK02090, phosphoadenylyl-sulfate reductase	NA|318aa|up_1|LS483428.1_1014701_1015655_-	PRK15379, PRK15379, type III secretion system effector SopD	cas3|674aa|up_0|LS483428.1_1016044_1018066_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|349aa|down_0|LS483428.1_1018981_1020028_-	PRK10199, PRK10199, alkaline phosphatase isozyme conversion aminopeptidase; Provisional	NA|303aa|down_1|LS483428.1_1020279_1021188_+	PRK05253, PRK05253, sulfate adenylyltransferase subunit CysD	NA|480aa|down_2|LS483428.1_1021197_1022637_+	PRK05124, cysN, sulfate adenylyltransferase subunit 1; Provisional	NA|202aa|down_3|LS483428.1_1022623_1023229_+	PRK03846, PRK03846, adenylylsulfate kinase; Provisional	NA|108aa|down_4|LS483428.1_1023279_1023603_+	pfam12084, DUF3561, Protein of unknown function (DUF3561)	NA|104aa|down_5|LS483428.1_1023793_1024105_+	PRK00888, ftsB, cell division protein FtsB; Reviewed	NA|237aa|down_6|LS483428.1_1024123_1024834_+	PRK00155, ispD, D-ribitol-5-phosphate cytidylyltransferase	NA|160aa|down_7|LS483428.1_1024833_1025313_+	PRK00084, ispF, 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Reviewed	NA|350aa|down_8|LS483428.1_1025309_1026359_+	PRK00984, truD, tRNA pseudouridine synthase D; Reviewed	NA|254aa|down_9|LS483428.1_1026339_1027101_+	PRK00346, surE, 5'(3')-nucleotidase/polyphosphatase; Provisional
GCA_900475895.1_47972_E02	LS483428	Salmonella enterica strain NCTC10436 genome assembly, chromosome: 1	3	2188051-2188628	3,3,3	PILER-CR,CRISPRCasFinder,CRT	no		cas14j,c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	Orphan	GTGTTCCCCGCGAGAGCGGGGATAAACCG,GTGTTCCCCGCGAGAGCGGGGATAAACCG,GTGTTCCCCGCGAGAGCGGGGATAAACCG	29,29,29	1	1	2188263-2188294	LS483428.1_1259292-1259261	I-E:I-E:I-E	8,9,9	9	Orphan	cas14j,c2c9_V-U4,cas3,PD-DExK,csa3,DEDDh,cas1,DinG	NA,NA	NA|77aa|up_9|LS483428.1_2173880_2174111_+	PRK09582, chaB, putative cation transport regulator ChaB	NA|118aa|up_8|LS483428.1_2174466_2174820_-	COG1553, DsrE, Uncharacterized conserved protein involved in intracellular sulfur reduction [Inorganic ion transport and metabolism]	NA|422aa|up_7|LS483428.1_2175155_2176421_+	PRK10177, PRK10177, YchO/YchP family invasin	NA|217aa|up_6|LS483428.1_2176421_2177072_-	PRK10651, PRK10651, transcriptional regulator NarL; Provisional	NA|599aa|up_5|LS483428.1_2177064_2178861_-	PRK10600, PRK10600, nitrate/nitrite two-component system sensor histidine kinase NarX	NA|466aa|up_4|LS483428.1_2179200_2180598_+	PRK15034, PRK15034, nitrate/nitrite transport protein NarU; Provisional	NA|1248aa|up_3|LS483428.1_2180985_2184729_+	TIGR01580, Respiratory_nitrate_reductase_1_alpha_chain, respiratory nitrate reductase, alpha subunit	NA|513aa|up_2|LS483428.1_2184725_2186264_+	COG1140, NarY, Nitrate reductase beta subunit [Energy production and conversion]	NA|237aa|up_1|LS483428.1_2186260_2186971_+	PRK15054, PRK15054, nitrate reductase molybdenum cofactor assembly chaperone	NA|226aa|up_0|LS483428.1_2186970_2187648_+	TIGR00351, Respiratory_nitrate_reductase_2_gamma_chain	NA|200aa|down_0|LS483428.1_2188896_2189496_+	sd00010, SLR, Sel1-like repeat	NA|281aa|down_1|LS483428.1_2190585_2191428_-	PRK06027, purU, formyltetrahydrofolate deformylase; Reviewed	NA|153aa|down_2|LS483428.1_2191478_2191937_-	PRK01617, PRK01617, hypothetical protein; Provisional	NA|299aa|down_3|LS483428.1_2192056_2192953_+	PRK10279, PRK10279, patatin-like phospholipase RssA	NA|338aa|down_4|LS483428.1_2193043_2194057_+	PRK10693, PRK10693, two-component system response regulator RssB	NA|303aa|down_5|LS483428.1_2194259_2195168_+	PRK13389, PRK13389, UTP--glucose-1-phosphate uridylyltransferase GalU	NA|138aa|down_6|LS483428.1_2195299_2195713_-	PRK10947, PRK10947, DNA-binding transcriptional regulator H-NS	NA|206aa|down_7|LS483428.1_2196250_2196868_+	PRK04296, PRK04296, thymidine kinase; Provisional	NA|893aa|down_8|LS483428.1_2197062_2199741_-	PRK13805, PRK13805, bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional	NA|216aa|down_9|LS483428.1_2200217_2200865_+	PRK11111, PRK11111, YchE family NAAT transporter
