The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	36562	48923	1819726		Synechococcus_phage(28.57%)	8	NA	NA
SQH20904.1|36562_40336_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.3	2.0e-38
SQH20905.1|40496_41951_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	33.3	4.9e-54
SQH20906.1|41978_43001_+	phosphoribosylaminoimidazole synthetase	NA	A0A0E3FGG1	Synechococcus_phage	41.1	1.2e-62
SQH20907.1|43168_43723_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	2.4e-25
SQH20908.1|43906_45454_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
SQH20909.1|45511_46636_-	bacterial SH3 domain protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
SQH20910.1|46888_48154_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQH20911.1|48311_48923_+	phosphoribosyl carboxyaminoimidazole mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.1e-18
>prophage 2
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	755320	776064	1819726		Streptococcus_phage(89.47%)	20	NA	NA
SQH22547.1|755320_755887_+	ABC transporter, ATP-binding protein	NA	A0A1V0SE00	Indivirus	34.6	7.7e-16
SQH22549.1|756210_756525_+	Bacterial protein of uncharacterised function (DUF961)	NA	A0A1S5SF38	Streptococcus_phage	100.0	5.2e-54
SQH22551.1|756543_756927_+	Bacterial protein of uncharacterised function (DUF961)	NA	A0A1S5SF96	Streptococcus_phage	100.0	2.3e-64
SQH22553.1|756955_758341_+	DNA translocase FtsK	NA	A0A1S5SFB5	Streptococcus_phage	100.0	1.1e-265
SQH22555.1|758518_759724_+	transcriptional regulator protein	NA	A0A1S5SEX3	Streptococcus_phage	100.0	2.8e-233
SQH22557.1|759766_759988_+	FIG086557: Conjugation related protein	NA	A0A1S5SEY0	Streptococcus_phage	100.0	4.3e-31
SQH22559.1|760104_760602_+	Antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	100.0	1.7e-91
SQH22561.1|760576_761083_+	TcpE family	NA	A0A1S5SEX7	Streptococcus_phage	100.0	8.6e-91
SQH22564.1|761066_763514_+	Type IV secretory pathway, VirB4 components	NA	A0A1S5SF64	Streptococcus_phage	100.0	0.0e+00
SQH22566.1|763582_765694_+	Tn916 ORF15 signal peptide containing protein	NA	A0A1S5SF30	Streptococcus_phage	96.0	0.0e+00
SQH22568.1|765690_766692_+	lipoprotein, NLP/P60 family	NA	A0A1S5SEZ8	Streptococcus_phage	100.0	5.0e-191
SQH22570.1|766706_767621_+	putative conjugative transposon protein	NA	A0A1S5SF22	Streptococcus_phage	100.0	1.1e-168
SQH22572.1|767997_769917_+	tetracycline resistance protein TetM	NA	A0A1S5SF82	Streptococcus_phage	98.9	0.0e+00
SQH22574.1|770374_771748_+	tetracycline resistance protein TetL	NA	NA	NA	NA	NA
SQH22576.1|772062_772332_-	Helix-turn-helix	NA	A0A1S5SFA6	Streptococcus_phage	100.0	1.3e-24
SQH22578.1|772836_773259_+	RNA polymerase sigma factor	NA	A0A1S5SEW0	Streptococcus_phage	100.0	2.5e-72
SQH22580.1|773255_773486_+	Helix-turn-helix domain	NA	A0A1S5SEX1	Streptococcus_phage	100.0	2.7e-36
SQH22581.1|773946_774150_+	Mobile element protein	NA	A0A1S5SF07	Streptococcus_phage	100.0	4.0e-31
SQH22584.1|774231_775449_+	Mobile element protein	NA	A0A1S5SEW7	Streptococcus_phage	100.0	3.7e-233
SQH22586.1|775617_776064_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.0	3.0e-23
>prophage 3
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	1173765	1181165	1819726		Streptococcus_phage(66.67%)	6	NA	NA
SQH23272.1|1173765_1175118_-	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.2	9.2e-31
SQH23273.1|1175338_1175680_-	hypothetical cytosolic protein	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
SQH23274.1|1175740_1176907_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.5	5.8e-34
SQH23275.1|1177000_1177687_-	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
SQH23276.1|1177683_1178847_-	SAM-dependent methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
SQH23277.1|1178954_1181165_+	phosphoglycerol transferase	NA	W6LM83	Streptococcus_phage	69.1	5.0e-268
>prophage 4
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	1216580	1256171	1819726	bacteriocin,transposase,tRNA,protease	Streptococcus_phage(33.33%)	30	NA	NA
SQH23310.1|1216580_1218986_-|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
SQH23311.1|1219195_1220239_-|tRNA	phenylalanyl-tRNA synthetase alpha subunit	tRNA	A0A2K9L3A8	Tupanvirus	34.3	2.7e-30
SQH23312.1|1220521_1221388_-	DNA-entry nuclease	NA	NA	NA	NA	NA
SQH23313.1|1221423_1221612_-	epuA protein	NA	NA	NA	NA	NA
SQH23314.1|1221615_1222887_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQH23315.1|1222951_1223209_-	membrane protein	NA	NA	NA	NA	NA
SQH23316.1|1223474_1223891_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
SQH23317.1|1223903_1225310_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
SQH23318.1|1225471_1226347_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
SQH23319.1|1226362_1227871_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
SQH23320.1|1227886_1228423_-	ATP synthase delta chain	NA	NA	NA	NA	NA
SQH23321.1|1228422_1228917_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
SQH23322.1|1228934_1229651_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
SQH23323.1|1229685_1229883_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
SQH23324.1|1230290_1231313_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	27.9	3.6e-19
SQH23325.1|1231326_1233285_-	NAD-dependent DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	34.9	1.3e-102
SQH23326.1|1234257_1236990_-	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
SQH23327.1|1237561_1238680_-	ABC transporter	NA	NA	NA	NA	NA
SQH23328.1|1238676_1239804_-	ABC transporter	NA	NA	NA	NA	NA
SQH23329.1|1239812_1240736_-	ABC transporter family protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	38.1	6.7e-33
SQH23330.1|1240758_1241442_-	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA	NA
SQH23331.1|1241438_1242110_-|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQH23332.1|1242084_1243443_-|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	bacteriocin	NA	NA	NA	NA
SQH23333.1|1243462_1244521_-|bacteriocin	bacteriocin biosynthesis cyclodehydratase	bacteriocin	NA	NA	NA	NA
SQH23334.1|1244517_1245468_-	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA	NA
SQH23335.1|1245689_1245851_-|bacteriocin	bacteriocin protoxin, streptolysin S family protein	bacteriocin	NA	NA	NA	NA
SQH23336.1|1246715_1252859_-	extracellular matrix binding protein	NA	NA	NA	NA	NA
SQH23337.1|1253331_1254873_+	MgaA-like transcriptional regulator	NA	NA	NA	NA	NA
SQH23338.1|1255182_1255488_+|transposase	transposase	transposase	A0A1X9I5Z0	Streptococcus_phage	71.6	8.4e-17
SQH23339.1|1255481_1256171_+|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	79.4	1.3e-94
>prophage 5
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	1363990	1370640	1819726	portal	Streptococcus_phage(66.67%)	14	NA	NA
SQH23437.1|1363990_1364815_-	asparagine ligase A	NA	M1PB22	Moumouvirus	33.1	6.2e-22
SQH23438.1|1364838_1365177_-	huntington interacting protein HYPE	NA	NA	NA	NA	NA
SQH23439.1|1365593_1365908_-	prophage minor structural protein	NA	Q6DMT0	Streptococcus_phage	64.5	4.9e-20
SQH23440.1|1365973_1366426_-|portal	portal protein	portal	E4ZFM3	Streptococcus_phage	84.2	6.3e-61
SQH23441.1|1366530_1366803_-	cytoplasmic protein	NA	E4ZFM1	Streptococcus_phage	45.2	3.8e-05
SQH23442.1|1366821_1367127_-	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA	NA
SQH23443.1|1367126_1367429_-	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA	NA
SQH23444.1|1367483_1367642_-	prophage LambdaSa04	NA	M1PSF2	Streptococcus_phage	88.5	3.5e-19
SQH23445.1|1367684_1368410_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH23446.1|1368568_1368793_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH23447.1|1368783_1369557_+	Chromosome segregation ATPase	NA	NA	NA	NA	NA
SQH23448.1|1369595_1369955_+	chromosome segregation ATPase	NA	NA	NA	NA	NA
SQH23449.1|1369967_1370441_+	Chromosome segregation ATPase	NA	NA	NA	NA	NA
SQH23450.1|1370430_1370640_+	vanUG2	NA	A0A2K5B263	Erysipelothrix_phage	60.0	8.3e-16
>prophage 6
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	1423251	1456180	1819726	bacteriocin,protease,transposase	Erwinia_phage(12.5%)	41	NA	NA
SQH23500.1|1423251_1423674_+|transposase	transposase	transposase	NA	NA	NA	NA
SQH23501.1|1423670_1423820_+|transposase	IS1191 transposase	transposase	NA	NA	NA	NA
SQH23502.1|1424157_1424340_-|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	bacteriocin	NA	NA	NA	NA
SQH23503.1|1424354_1424600_-|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	bacteriocin	NA	NA	NA	NA
SQH23504.1|1424996_1425251_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQH23505.1|1425556_1426033_-	phosphohydrolase	NA	NA	NA	NA	NA
SQH23506.1|1426052_1426949_-	GTP-binding protein Era	NA	NA	NA	NA	NA
SQH23507.1|1427068_1427476_-	diacylglycerol kinase	NA	NA	NA	NA	NA
SQH23508.1|1427456_1427954_-|protease	metalloprotease	protease	NA	NA	NA	NA
SQH23509.1|1428112_1428688_-	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA	NA
SQH23510.1|1428733_1429786_-	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
SQH23511.1|1429944_1431717_-	myosin-cross-reactive antigen	NA	NA	NA	NA	NA
SQH23512.1|1432030_1433188_-	lysM domain protein	NA	A0A0E3XB61	Gordonia_phage	40.5	9.3e-16
SQH23513.1|1433343_1433559_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQH23514.1|1433555_1434065_-	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SQH23515.1|1434137_1434995_-	s1 RNA binding domain	NA	NA	NA	NA	NA
SQH23516.1|1435103_1435661_-	ribosome recycling factor	NA	NA	NA	NA	NA
SQH23517.1|1435689_1436418_-	uridylate kinase	NA	NA	NA	NA	NA
SQH23518.1|1436740_1437430_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQH23519.1|1437535_1437961_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQH23520.1|1438204_1438558_+	integral membrane protein	NA	NA	NA	NA	NA
SQH23521.1|1438627_1441033_-	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
SQH23522.1|1441249_1442056_+	cyclophilin type peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
SQH23523.1|1442203_1443058_-	ABC 3 transport family protein	NA	NA	NA	NA	NA
SQH23524.1|1443058_1443784_-	manganese transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.1e-17
SQH23525.1|1443847_1444780_-	manganese-binding protein	NA	NA	NA	NA	NA
SQH23526.1|1444925_1445573_+	metalloregulator ScaR	NA	NA	NA	NA	NA
SQH23527.1|1445671_1446013_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH23528.1|1446164_1446860_-	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
SQH23529.1|1446879_1447131_-	membrane protein	NA	NA	NA	NA	NA
SQH23530.1|1447130_1447685_-	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
SQH23531.1|1447715_1449098_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L4K9	Tupanvirus	36.0	8.5e-32
SQH23532.1|1449270_1450608_-	phosphoglycerate transporter protein	NA	NA	NA	NA	NA
SQH23533.1|1450940_1451900_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SQH23534.1|1451967_1452666_-	3-ketoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	24.2	2.7e-10
SQH23535.1|1452658_1452895_-	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA	NA
SQH23536.1|1453256_1453760_+	phage protein	NA	NA	NA	NA	NA
SQH23537.1|1453984_1454236_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQH23538.1|1454479_1454932_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQH23539.1|1455265_1455460_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQH23540.1|1455460_1456180_+|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	50.4	1.7e-60
>prophage 7
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	1475159	1481192	1819726		Streptococcus_phage(100.0%)	9	NA	NA
SQH23552.1|1475159_1475987_+	3'-exo-deoxyribonuclease	NA	M1PSC0	Streptococcus_phage	79.5	4.9e-128
SQH23553.1|1476060_1476417_-	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
SQH23554.1|1476715_1477345_+	copper homeostasis protein	NA	NA	NA	NA	NA
SQH23555.1|1477391_1477784_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQH23556.1|1477810_1478674_-	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
SQH23557.1|1478678_1479002_-	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
SQH23558.1|1479405_1479645_-	Tpl protein	NA	NA	NA	NA	NA
SQH23559.1|1479663_1480539_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	44.8	3.7e-65
SQH23560.1|1480556_1481192_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
>prophage 8
LS483425	Streptococcus pyogenes strain NCTC13737 genome assembly, chromosome: 1	1819726	1744960	1762672	1819726		Streptococcus_phage(41.67%)	20	NA	NA
SQH23788.1|1744960_1746181_-	transporter	NA	A0A2H4PQR6	Staphylococcus_phage	24.3	2.7e-05
SQH23789.1|1746191_1748174_-	DNA mismatch repair protein	NA	A0A1B2LRQ5	Wolbachia_phage	30.4	3.9e-62
SQH23790.1|1748268_1749414_-	DNA integration/recombination/inversion protein	NA	A0A1X9I5Y5	Streptococcus_phage	45.1	9.3e-85
SQH23791.1|1749750_1750740_-	Protein of uncharacterised function (DUF3644)	NA	A0A0N9RUA4	Staphylococcus_phage	47.0	2.8e-77
SQH23792.1|1750766_1751030_-	DNA-binding phage protein	NA	O48392	Streptococcus_phage	47.1	6.1e-16
SQH23793.1|1751392_1752283_-	DNA-binding phage protein	NA	E8ZDI9	Streptococcus_phage	36.4	6.5e-09
SQH23794.1|1752347_1752542_+	DNA-binding phage protein	NA	NA	NA	NA	NA
SQH23795.1|1752848_1753022_+	phage protein	NA	NA	NA	NA	NA
SQH23796.1|1753165_1753618_+	phage protein	NA	NA	NA	NA	NA
SQH23797.1|1753707_1754040_+	phage protein	NA	NA	NA	NA	NA
SQH23798.1|1754036_1754231_+	phage protein	NA	NA	NA	NA	NA
SQH23799.1|1754242_1754605_+	phage protein	NA	NA	NA	NA	NA
SQH23800.1|1754601_1754931_+	phage protein	NA	NA	NA	NA	NA
SQH23801.1|1754933_1755206_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	57.5	2.6e-17
SQH23802.1|1755206_1756073_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	73.7	2.7e-121
SQH23803.1|1756092_1757595_+	phage replication protein	NA	Q9AZI5	Lactococcus_phage	37.5	7.0e-64
SQH23804.1|1758149_1758512_+	phage protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	8.7e-05
SQH23805.1|1758486_1758870_+	phage protein	NA	Q938L8	Temperate_phage	41.7	3.7e-14
SQH23806.1|1759071_1759719_+	secreted phage protein	NA	NA	NA	NA	NA
SQH23807.1|1760116_1762672_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	22.8	5.2e-43
