assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475855.1_46338_B02	LS483422	Providencia heimbachae strain NCTC12003 genome assembly, chromosome: 1	1	322772-322889	1	CRISPRCasFinder	no		TnsE_C,WYL,cas3,DEDDh,csa3,DinG	Orphan	CTTGCTACAAACTCGAATTATTTAGAATATTA	32	0	0	NA	NA	NA	1	1	Orphan	TnsE_C,WYL,cas3,DEDDh,csa3,DinG	NA,NA	NA|77aa|up_9|LS483422.1_311902_312133_-	PRK09555, feoA, ferrous iron transporter A	NA|777aa|up_8|LS483422.1_312514_314845_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|162aa|up_7|LS483422.1_315014_315500_+	PRK01885, greB, transcription elongation factor GreB; Reviewed	NA|240aa|up_6|LS483422.1_315617_316337_+	PRK09468, ompR, osmolarity response regulator; Provisional	NA|444aa|up_5|LS483422.1_316333_317665_+	PRK09467, envZ, osmolarity sensor protein; Provisional	NA|348aa|up_4|LS483422.1_318136_319180_+	PRK10918, PRK10918, phosphate ABC transporter substrate-binding protein PstS	NA|324aa|up_3|LS483422.1_319280_320252_+	PRK11275, pstC, phosphate ABC transporter permease PstC	NA|294aa|up_2|LS483422.1_320253_321135_+	PRK11268, pstA, phosphate ABC transporter permease PstA	NA|259aa|up_1|LS483422.1_321172_321949_+	PRK10744, pstB, phosphate ABC transporter ATP-binding protein PstB	NA|238aa|up_0|LS483422.1_321962_322676_+	PRK11115, PRK11115, phosphate signaling complex protein PhoU	NA|293aa|down_0|LS483422.1_323137_324016_+	cd13689, PBP2_BsGlnH, Substrate binding domain of ABC glutamine transporter from Bacillus subtilis; the type 2 periplasmic-bindig protein fold	NA|251aa|down_1|LS483422.1_324184_324937_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|251aa|down_2|LS483422.1_324938_325691_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|444aa|down_3|LS483422.1_325881_327213_+	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|173aa|down_4|LS483422.1_327473_327992_+	pfam04220, YihI, Der GTPase activator (YihI)	NA|458aa|down_5|LS483422.1_328219_329593_+	PRK09249, PRK09249, coproporphyrinogen dehydrogenase	NA|381aa|down_6|LS483422.1_329950_331093_-	PRK11289, ampC, beta-lactamase/D-alanine carboxypeptidase; Provisional	NA|294aa|down_7|LS483422.1_331277_332159_+	cd08484, PBP2_LTTR_beta_lactamase, The C-terminal substrate-domain of LysR-type transcriptional regulators for beta-lactamase genes, contains the type 2 periplasmic binding fold	NA|96aa|down_8|LS483422.1_332229_332517_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|77aa|down_9|LS483422.1_332581_332812_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins
GCA_900475855.1_46338_B02	LS483422	Providencia heimbachae strain NCTC12003 genome assembly, chromosome: 1	2	595622-595715	2	CRISPRCasFinder	no		TnsE_C,WYL,cas3,DEDDh,csa3,DinG	Orphan	TCAGTAAAACGTGTCGAAAATGAG	24	0	0	NA	NA	NA	1	1	Orphan	TnsE_C,WYL,cas3,DEDDh,csa3,DinG	NA,NA|158aa|down_9|LS483422.1_607089_607563_+	NA|808aa|up_9|LS483422.1_584008_586432_+	TIGR02166, Putative_dimethyl_sulfoxide_reductase_chain_YnfE, anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family	NA|214aa|up_8|LS483422.1_586428_587070_+	TIGR02951, anaerobic_dimethyl_sulfoxide_reductase_subunit_B, DMSO reductase, iron-sulfur subunit	NA|300aa|up_7|LS483422.1_587066_587966_+	COG3302, DmsC, DMSO reductase anchor subunit [General function prediction only]	NA|199aa|up_6|LS483422.1_588047_588644_+	PRK11621, PRK11621, Tat proofreading chaperone DmsD	NA|141aa|up_5|LS483422.1_588901_589324_+	pfam07681, DoxX, DoxX	NA|265aa|up_4|LS483422.1_589415_590210_-	pfam10127, Nuc-transf, Predicted nucleotidyltransferase	NA|409aa|up_3|LS483422.1_590221_591448_-	pfam01139, RtcB, tRNA-splicing ligase RtcB	NA|373aa|up_2|LS483422.1_591450_592569_-	cd13438, SPFH_eoslipins_u2, Uncharacterized prokaryotic subgroup of the stomatin-like proteins (slipins) family; belonging to the SPFH (stomatin, prohibitin, flotillin, and HflK/C) superfamily	NA|525aa|up_1|LS483422.1_593055_594630_+	COG4650, RtcR, Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain [Transcription / Signal transduction mechanisms]	NA|305aa|up_0|LS483422.1_594674_595589_+	TIGR02649, Ribonuclease_BN, ribonuclease BN	NA|260aa|down_0|LS483422.1_595736_596516_-	PRK10681, PRK10681, DNA-binding transcriptional repressor DeoR; Provisional	NA|223aa|down_1|LS483422.1_596684_597353_-	PRK00507, PRK00507, deoxyribose-phosphate aldolase; Provisional	NA|307aa|down_2|LS483422.1_597586_598507_+	TIGR02152, Putative_ribokinase, ribokinase	NA|436aa|down_3|LS483422.1_598607_599915_+	cd17394, MFS_FucP_like, Fucose permease and similar proteins of the Major Facilitator Superfamily of transporters	NA|339aa|down_4|LS483422.1_599971_600988_+	cd09269, deoxyribose_mutarotase, deoxyribose mutarotase_like	NA|338aa|down_5|LS483422.1_601258_602272_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|720aa|down_6|LS483422.1_602544_604704_+	PRK13578, PRK13578, ornithine decarboxylase; Provisional	NA|252aa|down_7|LS483422.1_604973_605729_+	cd06223, PRTases_typeI, Phosphoribosyl transferase (PRT)-type I domain	NA|312aa|down_8|LS483422.1_606114_607050_+	cd02651, nuc_hydro_IU_UC_XIUA, nuc_hydro_IU_UC_XIUA: inosine-uridine preferring, xanthosine-inosine-uridine-adenosine-preferring and, uridine-cytidine preferring nucleoside hydrolases	NA|158aa|down_9|LS483422.1_607089_607563_+	NA
GCA_900475855.1_46338_B02	LS483422	Providencia heimbachae strain NCTC12003 genome assembly, chromosome: 1	3	1305101-1305188	3	CRISPRCasFinder	no		TnsE_C,WYL,cas3,DEDDh,csa3,DinG	Orphan	ACTCGGCTACTCGGGTCACATACTT	25	0	0	NA	NA	NA	1	1	Orphan	TnsE_C,WYL,cas3,DEDDh,csa3,DinG	NA,NA|156aa|down_1|LS483422.1_1308162_1308630_-	NA|527aa|up_9|LS483422.1_1296052_1297633_+	PRK06458, PRK06458, hydrogenase 4 subunit F; Validated	NA|578aa|up_8|LS483422.1_1297634_1299368_+	COG3261, HycE, Ni,Fe-hydrogenase III large subunit [Energy production and conversion]	NA|184aa|up_7|LS483422.1_1299382_1299934_+	PRK08222, PRK08222, hydrogenase 4 subunit H; Validated	NA|261aa|up_6|LS483422.1_1299930_1300713_+	COG3260, COG3260, Ni,Fe-hydrogenase III small subunit [Energy production and conversion]	NA|143aa|up_5|LS483422.1_1300705_1301134_+	pfam07450, HycH, Formate hydrogenlyase maturation protein HycH	NA|160aa|up_4|LS483422.1_1301130_1301610_+	PRK11544, hycI, hydrogenase 3 maturation protease; Provisional	NA|91aa|up_3|LS483422.1_1301678_1301951_-	PRK10413, PRK10413, hydrogenase maturation factor HybG	NA|114aa|up_2|LS483422.1_1301986_1302328_-	pfam01155, HypA, Hydrogenase/urease nickel incorporation, metallochaperone, hypA	NA|183aa|up_1|LS483422.1_1302338_1302887_-	PRK10330, PRK10330, electron transport protein HydN	NA|531aa|up_0|LS483422.1_1303464_1305057_+	PRK15429, PRK15429, formate hydrogenlyase transcriptional activator FlhA	NA|559aa|down_0|LS483422.1_1305690_1307367_-	TIGR01591, Formate_dehydrogenase_subunit_alpha, formate dehydrogenase, alpha subunit, archaeal-type	NA|156aa|down_1|LS483422.1_1308162_1308630_-	NA	NA|307aa|down_2|LS483422.1_1308756_1309677_-	COG1566, EmrA, Multidrug resistance efflux pump [Defense mechanisms]	NA|65aa|down_3|LS483422.1_1309669_1309864_-	pfam07869, DUF1656, Protein of unknown function (DUF1656)	NA|646aa|down_4|LS483422.1_1309879_1311817_-	pfam04632, FUSC, Fusaric acid resistance protein family	NA|302aa|down_5|LS483422.1_1311934_1312840_-	cd08460, PBP2_DntR_like_1, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator similar to DntR, which is involved in the catabolism of dinitrotoluene; contains the type 2 periplasmic binding fold	NA|115aa|down_6|LS483422.1_1313010_1313355_+	COG2329, COG2329, Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides [General function prediction only]	NA|157aa|down_7|LS483422.1_1313415_1313886_-	COG4125, COG4125, Predicted membrane protein [Function unknown]	NA|285aa|down_8|LS483422.1_1313984_1314839_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|160aa|down_9|LS483422.1_1315026_1315506_+	pfam16103, DUF4822, Domain of unknown function (DUF4822)
