The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	37915	50350	1790372		Synechococcus_phage(28.57%)	8	NA	NA
SQG95967.1|37915_41689_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	6.1e-40
SQG95968.1|41922_43377_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	6.3e-54
SQG95969.1|43404_44427_+	phosphoribosylaminoimidazole synthetase	NA	A0A0E3FGG1	Synechococcus_phage	41.7	4.0e-63
SQG95970.1|44594_45149_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	2.4e-25
SQG95971.1|45332_46880_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	E3SNU8	Prochlorococcus_phage	52.4	5.7e-45
SQG95972.1|46937_48062_-	bacterial SH3 domain protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
SQG95973.1|48224_49580_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQG95974.1|49858_50350_+	phosphoribosyl carboxyaminoimidazole mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	1.4e-18
>prophage 2
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	335493	390649	1790372	protease,transposase,bacteriocin,tRNA	Streptococcus_phage(33.33%)	58	NA	NA
SQG96247.1|335493_336084_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	55.2	7.5e-54
SQG96248.1|336578_336854_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG96249.1|337102_337738_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	1.2e-65
SQG96250.1|337755_338631_+	DNA polymerase III subunit delta	NA	M1NSC1	Streptococcus_phage	41.4	2.0e-55
SQG96251.1|338649_338889_+	Tpl protein	NA	NA	NA	NA	NA
SQG96252.1|339293_339617_+	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
SQG96253.1|339621_340485_+	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	73.6	3.6e-113
SQG96254.1|340511_340904_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG96255.1|340950_341580_-	copper homeostasis protein	NA	NA	NA	NA	NA
SQG96256.1|341879_342236_+	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.0	1.1e-39
SQG96257.1|342309_343137_-	3'-exo-deoxyribonuclease	NA	M1PSC0	Streptococcus_phage	79.1	8.4e-128
SQG96258.1|343370_344552_+	L-lactate oxidase	NA	NA	NA	NA	NA
SQG96259.1|344817_349761_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA	NA
SQG96260.1|350530_351238_+	permease	NA	NA	NA	NA	NA
SQG96261.1|351480_353478_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SHR2	Klosneuvirus	35.0	1.3e-86
SQG96262.1|353972_354986_+	ribonucleotide-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	53.0	4.2e-97
SQG96263.1|354989_355478_+	nrdI protein	NA	R4JF54	Bacillus_phage	37.5	1.3e-11
SQG96264.1|355444_357625_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.1	1.4e-169
SQG96265.1|357830_358583_-	ADP-ribosyltransferase	NA	NA	NA	NA	NA
SQG96266.1|359040_359391_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG96267.1|359805_360057_+	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQG96268.1|360151_360652_-	phage protein	NA	NA	NA	NA	NA
SQG96269.1|361012_361249_+	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA	NA
SQG96270.1|361241_361940_+	3-ketoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.2	3.5e-10
SQG96271.1|362015_362975_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SQG96272.1|363307_364645_+	phosphoglycerate transporter protein	NA	NA	NA	NA	NA
SQG96273.1|364818_366201_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L4K9	Tupanvirus	36.4	2.2e-32
SQG96274.1|366231_366786_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
SQG96275.1|366785_367037_+	membrane protein	NA	NA	NA	NA	NA
SQG96276.1|367056_367752_+	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
SQG96277.1|367902_368244_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96278.1|368340_368988_-	metalloregulator ScaR	NA	NA	NA	NA	NA
SQG96279.1|369133_370066_+	manganese-binding protein	NA	NA	NA	NA	NA
SQG96280.1|370129_370855_+	manganese transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.4e-17
SQG96281.1|370855_371710_+	ABC 3 transport family protein	NA	NA	NA	NA	NA
SQG96282.1|371856_372663_-	cyclophilin type peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
SQG96283.1|372879_375285_+	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
SQG96284.1|375354_375708_-	integral membrane protein	NA	NA	NA	NA	NA
SQG96285.1|375951_376377_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQG96286.1|376482_377172_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQG96287.1|377493_378222_+	uridylate kinase	NA	NA	NA	NA	NA
SQG96288.1|378250_378808_+	ribosome recycling factor	NA	NA	NA	NA	NA
SQG96289.1|378916_379774_+	s1 RNA binding domain	NA	NA	NA	NA	NA
SQG96290.1|379846_380356_+	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SQG96291.1|380352_380568_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG96292.1|380723_381905_+	lysM domain protein	NA	A0A0E3XB61	Gordonia_phage	39.6	2.1e-15
SQG96293.1|382219_383992_+	myosin-cross-reactive antigen	NA	NA	NA	NA	NA
SQG96294.1|384150_385203_+	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
SQG96295.1|385248_385824_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA	NA
SQG96296.1|385982_386480_+|protease	metalloprotease	protease	NA	NA	NA	NA
SQG96297.1|386460_386868_+	diacylglycerol kinase	NA	NA	NA	NA	NA
SQG96298.1|386987_387884_+	GTP-binding protein Era	NA	NA	NA	NA	NA
SQG96299.1|387904_388381_+	phosphohydrolase	NA	NA	NA	NA	NA
SQG96300.1|388686_388941_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96301.1|389338_389473_+|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	bacteriocin	NA	NA	NA	NA
SQG96302.1|389560_389743_+|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	bacteriocin	NA	NA	NA	NA
SQG96303.1|390080_390230_-|transposase	IS1191 transposase	transposase	NA	NA	NA	NA
SQG96304.1|390226_390649_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	513315	525559	1790372	tRNA	Streptococcus_phage(55.56%)	11	NA	NA
SQG96425.1|513315_514008_+	cell division ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.6	1.0e-30
SQG96426.1|514000_514930_+	cell division protein FtsX	NA	NA	NA	NA	NA
SQG96427.1|515239_515875_-	Hydroxyacylglutathione hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	63.3	3.2e-79
SQG96428.1|516105_516870_+	acetoin reductase	NA	A0A0M4JSW6	Mollivirus	27.0	9.2e-12
SQG96429.1|516977_518438_+	helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	53.9	6.9e-133
SQG96430.1|518500_519478_+	helicase DinG	NA	A0A1X9I5C8	Streptococcus_phage	43.6	1.1e-57
SQG96431.1|519812_521006_+	aspartate aminotransferase	NA	NA	NA	NA	NA
SQG96432.1|521026_522373_+|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A2P1EMB4	Moumouvirus	30.8	1.1e-55
SQG96433.1|522786_523677_+	P-loop ATPase protein family protein	NA	A0A0R8VB27	Thermobifida_phage	29.8	8.8e-06
SQG96434.1|523673_524651_+	transporter	NA	A1IMD5	Streptococcus_phage	74.2	1.2e-138
SQG96435.1|524647_525559_+	sporulation Regulator WhiA C terminal domain-containing protein	NA	Q7AWZ3	Streptococcus_phage	64.4	2.9e-105
>prophage 4
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	609821	617221	1790372		Streptococcus_phage(66.67%)	6	NA	NA
SQG96512.1|609821_612032_-	phosphoglycerol transferase	NA	W6LM83	Streptococcus_phage	68.9	6.5e-268
SQG96513.1|612139_613303_+	SAM-dependent methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
SQG96514.1|613299_613986_+	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
SQG96515.1|614079_615246_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	5.8e-34
SQG96516.1|615306_615648_+	hypothetical cytosolic protein	NA	A0A1X9I5Y8	Streptococcus_phage	40.2	3.8e-18
SQG96517.1|615868_617221_+	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.2	3.1e-31
>prophage 5
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	622998	667067	1790372	head,tRNA,transposase,protease	unidentified_phage(15.38%)	45	NA	NA
SQG96523.1|622998_623946_-|transposase	transposase	transposase	H7BW61	unidentified_phage	33.8	9.9e-32
SQG96524.1|624383_625136_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96525.1|625146_625842_-	multidrug ABC transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	36.3	8.0e-31
SQG96526.1|625854_626043_-	transcriptional regulator	NA	A0A142LP09	Marinitoga_camini_virus	40.0	7.7e-05
SQG96527.1|626047_626395_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96528.1|626499_627033_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96529.1|627345_627483_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96530.1|627432_627930_-|transposase	transposase	transposase	NA	NA	NA	NA
SQG96531.1|628204_628519_+	50S ribosomal protein L21	NA	NA	NA	NA	NA
SQG96532.1|628530_628857_+	hypothetical ribosome-associated protein	NA	NA	NA	NA	NA
SQG96533.1|628884_629178_+	LSU ribosomal protein L27p	NA	NA	NA	NA	NA
SQG96534.1|629526_630441_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQG96535.1|630437_630896_+	signal peptidase II	NA	NA	NA	NA	NA
SQG96536.1|630885_631776_+	ribosomal large subunit pseudouridine synthase D	NA	A0A2H4UV25	Bodo_saltans_virus	25.3	3.6e-07
SQG96537.1|632171_632693_+	Uracil phosphoribosyltransferase / Pyrimidine operon regulatory protein pyrR	NA	NA	NA	NA	NA
SQG96538.1|632708_633968_+	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.9	2.7e-61
SQG96539.1|633977_634964_+	aspartate carbamoyltransferase catalytic subunit	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	32.6	3.2e-25
SQG96540.1|635007_636090_+	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	36.9	4.7e-62
SQG96541.1|636335_639512_+	carbamoyl-phosphate synthase large chain	NA	NA	NA	NA	NA
SQG96542.1|639687_640959_+	RND family efflux transporter MFP subunit	NA	NA	NA	NA	NA
SQG96543.1|640958_641669_+	bacitracin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.5	1.7e-36
SQG96544.1|641680_642901_+	permease family protein	NA	NA	NA	NA	NA
SQG96545.1|643154_644888_+	glycerophosphodiester phosphodiesterase	NA	NA	NA	NA	NA
SQG96546.1|645014_645287_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
SQG96547.1|645296_645536_+	RNA binding protein	NA	NA	NA	NA	NA
SQG96548.1|646467_649494_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA	NA
SQG96549.1|649513_649915_+	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
SQG96550.1|650094_650970_-	cation diffusion facilitator transporter family protein	NA	NA	NA	NA	NA
SQG96551.1|651105_651627_+	transcriptional regulator, TetR family	NA	NA	NA	NA	NA
SQG96552.1|651841_652360_+	16S rRNA-processing protein	NA	NA	NA	NA	NA
SQG96553.1|652349_653069_+|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
SQG96554.1|653080_654073_+	thioredoxin reductase	NA	Q9JRK7	Streptococcus_phage	54.9	6.3e-29
SQG96555.1|654250_655309_+	regulatory protein	NA	NA	NA	NA	NA
SQG96556.1|655321_656245_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
SQG96557.1|656545_657214_+	deoR-like helix-turn-helix domain-containing protein	NA	A0A077SK06	Escherichia_phage	32.2	6.3e-17
SQG96558.1|657210_658122_+	1-phosphofructokinase	NA	NA	NA	NA	NA
SQG96559.1|658118_660065_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA	NA
SQG96560.1|660163_660757_+	N-acetylmuramidase	NA	A0A249Y0X5	Enterococcus_phage	33.8	3.5e-11
SQG96561.1|660908_661616_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q332B8	Clostridium_botulinum_C_phage	36.4	1.9e-11
SQG96562.1|661771_661891_-|transposase	degenerate transposase	transposase	NA	NA	NA	NA
SQG96563.1|662572_663598_-|protease	igG-degrading protease	protease	NA	NA	NA	NA
SQG96564.1|664101_664278_+	nucleoside diphosphate kinase	NA	NA	NA	NA	NA
SQG96565.1|664505_664886_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG96566.1|664885_665734_+	degV family protein	NA	NA	NA	NA	NA
SQG96567.1|665858_667067_+|head	poly A polymerase head domain-containing protein	head	H7BUW3	unidentified_phage	45.0	6.9e-38
>prophage 6
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	683811	723791	1790372	protease,transposase	Streptococcus_phage(30.77%)	39	NA	NA
SQG96583.1|683811_685041_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.5	1.7e-137
SQG96584.1|685050_685650_+	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
SQG96585.1|685797_686541_+	virulence factor relevant regulator	NA	NA	NA	NA	NA
SQG96586.1|686598_688698_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	39.2	5.6e-120
SQG96587.1|689075_689759_+	ribose-5-phosphate isomerase A	NA	NA	NA	NA	NA
SQG96588.1|689835_691047_+	phosphopentomutase	NA	NA	NA	NA	NA
SQG96589.1|691062_691503_+	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	54.5	1.3e-34
SQG96590.1|691486_692296_+	purine nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	42.2	6.6e-53
SQG96591.1|692958_693672_+	Purine nucleoside phosphorylase	NA	NA	NA	NA	NA
SQG96592.1|693664_694453_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
SQG96593.1|694531_695386_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQG96594.1|695658_696195_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96595.1|696471_697164_+	orotidine 5'-phosphate decarboxylase	NA	NA	NA	NA	NA
SQG96596.1|697221_697851_+	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
SQG96597.1|698047_699502_+	amidase	NA	NA	NA	NA	NA
SQG96598.1|699619_700483_+	cystine-binding protein	NA	NA	NA	NA	NA
SQG96599.1|700511_701162_+	amino-acid ABC transporter permease yckA	NA	NA	NA	NA	NA
SQG96600.1|701294_701948_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	40.1	3.4e-39
SQG96601.1|702105_703374_+	dihydroorotase	NA	NA	NA	NA	NA
SQG96602.1|703431_704073_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SQG96603.1|704207_706157_+	topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.0	5.6e-122
SQG96604.1|706223_707042_+	phosphate ABC transporter ATPase	NA	NA	NA	NA	NA
SQG96605.1|707275_709699_+	topoisomerase IV subunit	NA	G3M9Z5	Bacillus_virus	33.3	1.2e-97
SQG96606.1|709821_710844_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SQG96607.1|710944_712078_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG96608.1|712233_712464_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SQG96609.1|712853_714059_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
SQG96610.1|714322_714616_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG96611.1|714670_715675_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	50.6	1.7e-61
SQG96612.1|715779_716556_-	Domain of uncharacterised function DUF1828	NA	NA	NA	NA	NA
SQG96613.1|716581_717052_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96614.1|717111_717855_-	Phage transcriptional repressor	NA	J7KJ52	Streptococcus_phage	58.3	1.1e-70
SQG96615.1|718202_718994_-	phage protein	NA	A0A1S5SAN8	Streptococcus_phage	36.8	3.6e-35
SQG96616.1|719049_719301_+	phage protein	NA	A0A141E1R7	Streptococcus_phage	56.0	1.0e-12
SQG96617.1|719287_719545_-	Uncharacterised protein	NA	M1PRU3	Streptococcus_phage	61.1	2.4e-09
SQG96618.1|719851_720148_+	enterotoxin	NA	NA	NA	NA	NA
SQG96619.1|720171_720303_+	exotoxin H precursor	NA	NA	NA	NA	NA
SQG96620.1|721867_722335_-	SpeA variant	NA	A0A097PAT7	Streptococcus_pyogenes_phage	89.0	2.5e-76
SQG96621.1|722657_723791_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 7
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	929294	1021352	1790372	integrase,tRNA,head,terminase,capsid,transposase,portal,tail,holin	Streptococcus_phage(45.71%)	114	1007307:1007322	1011495:1011510
SQG96821.1|929294_930179_-|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
SQG96822.1|930294_931635_-	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA	NA
SQG96823.1|931731_932688_-	membrane protein	NA	NA	NA	NA	NA
SQG96824.1|932698_933295_-	type I restriction-modification system specificty subunit	NA	NA	NA	NA	NA
SQG96825.1|933386_936023_-	permease family protein	NA	NA	NA	NA	NA
SQG96826.1|936037_936739_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	4.9e-36
SQG96827.1|936856_937399_+	bacterial regulatory s, tetR family protein	NA	NA	NA	NA	NA
SQG96828.1|937541_938183_-	bacterial regulatory s, gntR family protein	NA	NA	NA	NA	NA
SQG96829.1|938345_938834_-	general stress protein, Gls24 family	NA	NA	NA	NA	NA
SQG96830.1|938844_939045_-	csbD-like family protein	NA	J7KJ36	Streptococcus_phage	50.0	1.8e-07
SQG96831.1|939085_939625_-	response regulator	NA	NA	NA	NA	NA
SQG96832.1|939637_939826_-	membrane protein	NA	NA	NA	NA	NA
SQG96833.1|939836_940424_-	membrane protein	NA	NA	NA	NA	NA
SQG96834.1|940484_940733_-	transglycosylase associated family protein	NA	NA	NA	NA	NA
SQG96835.1|941095_943414_-	DNA helicase II / ATP-dependent DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.0	2.7e-131
SQG96836.1|943943_945266_+	amino acid symporter	NA	NA	NA	NA	NA
SQG96837.1|945385_946621_+	cation diffusion facilitator transporter family protein	NA	NA	NA	NA	NA
SQG96838.1|946990_947764_-	protein B	NA	NA	NA	NA	NA
SQG96839.1|948132_948969_-	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA	NA
SQG96840.1|948984_949614_-	histidine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.3e-27
SQG96841.1|949623_950265_-	histidine transporter permease	NA	NA	NA	NA	NA
SQG96842.1|950371_950707_-	phosphonoacetate hydrolase	NA	NA	NA	NA	NA
SQG96843.1|950752_950869_-	hupothetical protein	NA	NA	NA	NA	NA
SQG96844.1|950865_952008_-|transposase	transposase	transposase	NA	NA	NA	NA
SQG96845.1|952160_953309_-	Mannitol-1-phosphate 5-dehydrogenase, MtlD	NA	NA	NA	NA	NA
SQG96846.1|953336_953774_-	PTS system, mannitol-specific IIA component, MtlA	NA	NA	NA	NA	NA
SQG96847.1|953775_955746_-	Mannitol operon activator	NA	NA	NA	NA	NA
SQG96848.1|955753_957520_-	PTS system, mannitol-specific IIBC component	NA	NA	NA	NA	NA
SQG96849.1|957642_959457_-	glutamine-fructose-6-phosphate transaminase (isomerizing)	NA	A0A1J0F994	Only_Syngen_Nebraska_virus	37.4	2.8e-99
SQG96850.1|959623_960181_-	Signal peptidase I	NA	NA	NA	NA	NA
SQG96851.1|960310_961813_-	pyruvate kinase	NA	NA	NA	NA	NA
SQG96852.1|961875_962889_-	6-phosphofructokinase	NA	NA	NA	NA	NA
SQG96853.1|962968_966079_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.9	1.1e-119
SQG96854.1|966263_966635_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQG96855.1|966634_967333_+	ABC transporter family protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
SQG96856.1|967342_968128_+	ABC transporter permease protein	NA	NA	NA	NA	NA
SQG96857.1|968254_968869_-	membrane protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
SQG96858.1|969459_969648_-	paratox	NA	A3F673	Streptococcus_phage	81.4	6.5e-20
SQG96859.1|969885_970686_+	streptodornase	NA	NA	NA	NA	NA
SQG96860.1|970957_971392_+	phage membrane protein	NA	NA	NA	NA	NA
SQG96861.1|971770_972667_-	phage-associated cell wall hydrolase	NA	Q938J4	Temperate_phage	82.6	1.0e-150
SQG96862.1|972663_972774_-	phage membrane protein	NA	A7J2B4	Streptococcus_phage	94.4	3.0e-09
SQG96863.1|972782_973010_-|holin	prophage LambdaSa03, holin	holin	A7J2B3	Streptococcus_phage	100.0	2.0e-31
SQG96864.1|973006_973282_-|holin	phage holin	holin	A7J2B2	Streptococcus_phage	100.0	2.6e-41
SQG96865.1|973291_973909_-	phage protein	NA	Q938J7	Temperate_phage	89.3	1.4e-79
SQG96866.1|973911_974073_-	phage protein	NA	NA	NA	NA	NA
SQG96867.1|974086_975997_-	phage infection protein	NA	Q938J9	Temperate_phage	71.3	6.0e-121
SQG96868.1|976009_977017_-	phage hyaluronidase	NA	A7J2A8	Streptococcus_phage	72.2	2.6e-139
SQG96869.1|977013_979050_-	phage protein	NA	A3F656	Streptococcus_phage	84.1	0.0e+00
SQG96870.1|979046_979826_-|tail	phage tail protein	tail	A3F655	Streptococcus_phage	55.5	1.9e-68
SQG96871.1|979857_983124_-	tape measure domain protein	NA	U6E979	Streptococcus_phage	30.4	1.6e-04
SQG96872.1|983138_983468_-	phage protein	NA	A0A1P8BLR3	Lactococcus_phage	41.5	2.0e-11
SQG96873.1|983509_983869_-	phage protein	NA	D7RWD6	Brochothrix_phage	44.5	4.3e-20
SQG96874.1|983914_984568_-|tail	phage major tail protein	tail	D7RWD5	Brochothrix_phage	52.0	1.4e-40
SQG96875.1|984577_984967_-	phage protein	NA	Q38611	Lactococcus_phage	68.2	3.5e-44
SQG96876.1|984963_985194_-	phage protein	NA	A0A097BY98	Enterococcus_phage	59.4	2.1e-12
SQG96877.1|985308_985617_-	phage protein	NA	A0A2P1JTW8	Anoxybacillus_phage	40.2	4.3e-13
SQG96878.1|985613_985967_-	phage protein	NA	A0A2H4J002	uncultured_Caudovirales_phage	49.6	9.7e-25
SQG96879.1|985980_986223_-	phage protein	NA	NA	NA	NA	NA
SQG96880.1|986210_986432_-|capsid	Phage major capsid protein	capsid	O34062	Streptococcus_phage	77.8	1.9e-10
SQG96881.1|986431_987307_-|head	phage head protein	head	A0A286QP97	Streptococcus_phage	52.4	1.8e-67
SQG96882.1|987306_987687_-	structural protein	NA	A0A0K2CNR0	Brevibacillus_phage	37.9	5.2e-08
SQG96883.1|987696_988230_-	phage protein	NA	A0A141E0S7	Streptococcus_phage	83.9	1.4e-14
SQG96884.1|988341_989085_-	antirepressor	NA	M1PKL6	Streptococcus_phage	56.9	5.3e-73
SQG96885.1|989086_989335_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96886.1|989449_989629_-	Uncharacterised protein	NA	M1NRK8	Streptococcus_phage	79.7	2.6e-18
SQG96887.1|989724_989994_-	phage protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	84.1	2.3e-34
SQG96888.1|990053_990233_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96889.1|990223_991849_-|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	U6E9F1	Streptococcus_phage	43.8	1.1e-46
SQG96890.1|991829_993332_-|portal	phage portal protein, SPP1 family	portal	C9W9H5	Streptococcus_virus	54.5	2.4e-141
SQG96891.1|993343_994651_-|terminase	terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.2	5.9e-184
SQG96892.1|994628_995060_-|terminase	phage terminase small subunit	terminase	A0A1S5SCD2	Streptococcus_phage	69.9	1.3e-47
SQG96893.1|995628_996069_-	phage encoded transcriptional regulator, ArpU family	NA	Q938L8	Temperate_phage	97.3	7.2e-78
SQG96894.1|996339_996975_-	phage protein	NA	L0P368	Streptococcus_phage	67.9	5.5e-87
SQG96895.1|996974_997367_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG96896.1|997379_997580_-	Uncharacterised protein	NA	A0A0E3T873	Gordonia_phage	45.3	4.6e-08
SQG96897.1|997584_997869_-	phage membrane protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	86.2	2.6e-36
SQG96898.1|997865_998036_-	phage protein	NA	Q938M0	Temperate_phage	100.0	8.5e-11
SQG96899.1|998032_998446_-	phage protein	NA	Q938M1	Temperate_phage	62.4	4.6e-34
SQG96900.1|998429_998717_-	phage protein	NA	J7KDH9	Streptococcus_phage	75.0	5.1e-32
SQG96901.1|998716_998962_-	phage protein	NA	A0A097PBE9	Streptococcus_pyogenes_phage	93.8	4.8e-39
SQG96902.1|998958_999315_-	phage protein	NA	A0A1P8VVP9	Streptococcus_phage	97.5	2.1e-59
SQG96903.1|999311_999752_-	phage protein	NA	A0A097PAS0	Streptococcus_pyogenes_phage	98.6	1.6e-80
SQG96904.1|999960_1000380_-	single-stranded DNA-binding protein ssb	NA	Q938M7	Temperate_phage	97.1	3.1e-70
SQG96905.1|1000372_1001047_-	Single-stranded DNA-binding protein	NA	Q938M8	Temperate_phage	96.9	5.8e-103
SQG96906.1|1001047_1001530_-	phage protein	NA	Q938M9	Temperate_phage	98.8	1.6e-49
SQG96907.1|1001550_1001805_-	phage protein	NA	Q938N0	Temperate_phage	97.6	1.8e-41
SQG96908.1|1001785_1002139_-	phage protein	NA	A0A097PAU3	Streptococcus_pyogenes_phage	54.0	2.8e-16
SQG96909.1|1002151_1002289_-	phage protein	NA	J7KBQ4	Streptococcus_phage	78.4	2.7e-07
SQG96910.1|1002279_1003062_-	phage replication protein	NA	A0A097PAQ0	Streptococcus_pyogenes_phage	97.3	1.8e-143
SQG96911.1|1003048_1003879_-	dnaD and phage-associated domain-containing protein	NA	A0A1S5S918	Streptococcus_phage	54.7	6.4e-67
SQG96912.1|1003892_1004207_-	Transcriptional regulator, Cro/CI family	NA	A0A1P8VVN6	Streptococcus_phage	95.2	2.7e-50
SQG96913.1|1004222_1004357_-	phage protein	NA	A0A1P8VVR9	Streptococcus_phage	97.7	2.5e-18
SQG96914.1|1004353_1004650_-	phage protein	NA	A0A097PAT8	Streptococcus_pyogenes_phage	98.0	3.1e-48
SQG96915.1|1004728_1004914_-	phage regulatory protein	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
SQG96916.1|1005080_1005320_+	phage protein	NA	NA	NA	NA	NA
SQG96917.1|1005451_1005652_-	helix-turn-helix family protein	NA	A0A141E205	Streptococcus_phage	61.4	2.1e-08
SQG96918.1|1005703_1006345_+	phage protein	NA	J7KJ31	Streptococcus_phage	100.0	1.5e-116
SQG96919.1|1006443_1006602_-	phage membrane protein	NA	J7KH24	Streptococcus_phage	90.4	6.4e-21
SQG96920.1|1006660_1006876_+	Uncharacterised protein	NA	J7KBX0	Streptococcus_phage	95.7	2.5e-28
SQG96921.1|1006861_1007011_-	Uncharacterised protein	NA	J7KH12	Streptococcus_phage	91.8	4.3e-19
SQG96922.1|1007105_1007207_-	Uncharacterised protein	NA	NA	NA	NA	NA
1007307:1007322	attL	ATTATTTTTTATCGTG	NA	NA	NA	NA
SQG96923.1|1007366_1008191_+	phage transcriptional repressor	NA	A0A097PBE5	Streptococcus_pyogenes_phage	84.8	8.4e-120
SQG96924.1|1008203_1009013_+	phage protein	NA	J7KDP1	Streptococcus_phage	35.8	3.8e-24
SQG96925.1|1009069_1009222_-	phage protein	NA	NA	NA	NA	NA
SQG96926.1|1009262_1010351_+|integrase	integrase	integrase	Q38159	Streptococcus_phage	100.0	3.8e-205
SQG96927.1|1010625_1011246_+	phage protein	NA	NA	NA	NA	NA
SQG96928.1|1011502_1013767_-	glycogen phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.6e-11
1011495:1011510	attR	ATTATTTTTTATCGTG	NA	NA	NA	NA
SQG96929.1|1013801_1015295_-	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
SQG96930.1|1015410_1016430_-	LacI family transcription regulator	NA	C6ZCU4	Enterobacteria_phage	27.8	5.7e-17
SQG96931.1|1016672_1017920_+	maltose/maltodextrin-binding protein	NA	NA	NA	NA	NA
SQG96932.1|1018193_1019555_+	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA	NA
SQG96933.1|1019554_1020391_+	maltose transport system permease	NA	NA	NA	NA	NA
SQG96934.1|1020764_1021352_+|transposase	truncated transposase	transposase	Q9MBM9	Staphylococcus_prophage	40.8	4.1e-28
>prophage 8
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	1035496	1086349	1790372	tRNA,transposase,protease	Bacillus_phage(18.75%)	50	NA	NA
SQG96948.1|1035496_1036012_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG96949.1|1036032_1036839_+|transposase	transposase, IS861	transposase	A0A1B1P773	Bacillus_phage	49.3	1.1e-63
SQG96950.1|1037138_1038011_-	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA	NA
SQG96951.1|1038234_1039545_+	membrane protein	NA	NA	NA	NA	NA
SQG96952.1|1039622_1039916_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG96953.1|1039948_1040302_+	DNA-binding protein	NA	A0A1B1P773	Bacillus_phage	35.2	2.0e-06
SQG96954.1|1040347_1040518_+|transposase	transposase	transposase	U5P429	Shigella_phage	46.3	1.5e-07
SQG96955.1|1040687_1041419_-	16S pseudouridylate synthase	NA	NA	NA	NA	NA
SQG96956.1|1041533_1041899_+	thioesterase superfamily protein	NA	NA	NA	NA	NA
SQG96957.1|1042018_1043239_-	sugar (and other) transporter family protein	NA	NA	NA	NA	NA
SQG96958.1|1043612_1045097_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG96959.1|1045201_1045603_-	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA	NA
SQG96960.1|1045687_1046200_-	phosphorylase superfamily protein	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	96.5	6.6e-91
SQG96961.1|1046411_1047767_-|tRNA	tRNA (uracil-5-)-methyltransferase	tRNA	D0R096	Streptococcus_phage	98.2	8.0e-253
SQG96962.1|1047848_1049300_-	cell envelope-related function transcriptional attenuator common domain-containing protein	NA	NA	NA	NA	NA
SQG96963.1|1049507_1049999_-	shikimate kinase	NA	NA	NA	NA	NA
SQG96964.1|1049991_1051275_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQG96965.1|1051385_1052351_-	ribonuclease BN-like family protein	NA	NA	NA	NA	NA
SQG96966.1|1052352_1053213_-	methionine aminopeptidase Map	NA	NA	NA	NA	NA
SQG96967.1|1053228_1054512_-	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA	NA
SQG96968.1|1054520_1055063_-	acetyltransferase family protein	NA	NA	NA	NA	NA
SQG96969.1|1055230_1055701_-|transposase	transposase	transposase	NA	NA	NA	NA
SQG96970.1|1055654_1056365_-|transposase	transposase	transposase	NA	NA	NA	NA
SQG96971.1|1056627_1057233_-	immunoglobulin G-binding protein G	NA	NA	NA	NA	NA
SQG96972.1|1057589_1058849_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQG96973.1|1059022_1060219_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	65.4	4.5e-138
SQG96974.1|1060755_1063134_-	leucine Rich Repeat family protein	NA	NA	NA	NA	NA
SQG96975.1|1063336_1064278_+	biotin-protein ligase	NA	NA	NA	NA	NA
SQG96976.1|1064550_1066221_-	DNA polymerase III subunits gamma and tau	NA	E7DN81	Pneumococcus_phage	40.6	5.1e-47
SQG96977.1|1066220_1066718_-	GAF domain-containing protein	NA	NA	NA	NA	NA
SQG96978.1|1066862_1067672_+	membrane protein	NA	NA	NA	NA	NA
SQG96979.1|1067724_1067988_-	membrane protein	NA	NA	NA	NA	NA
SQG96980.1|1068067_1068694_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.7	1.7e-35
SQG96981.1|1068791_1069877_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	1.6e-33
SQG96982.1|1069987_1071262_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
SQG96983.1|1071356_1072784_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQG96984.1|1072968_1074702_-	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA	NA
SQG96985.1|1074706_1074970_-	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA	NA
SQG96986.1|1075363_1075582_+	glutaredoxin	NA	A0A249XUR7	Enterococcus_phage	48.0	2.3e-13
SQG96987.1|1075601_1077761_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.6	3.6e-263
SQG96988.1|1078093_1079053_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	69.9	1.8e-126
SQG96989.1|1079027_1080341_+	chloride channel protein	NA	NA	NA	NA	NA
SQG96990.1|1080436_1080730_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG96991.1|1080762_1081116_+	DNA-binding protein	NA	A0A1B1P773	Bacillus_phage	35.2	1.2e-06
SQG96992.1|1081161_1081332_+|transposase	transposase	transposase	U5P429	Shigella_phage	46.3	1.5e-07
SQG96993.1|1081371_1081587_+	Transposase	NA	U5P429	Shigella_phage	43.9	7.0e-10
SQG96994.1|1081683_1082379_-|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQG96995.1|1082397_1083159_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQG96996.1|1083155_1083377_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
SQG96997.1|1083730_1086349_-|tRNA	Alanyl-tRNA synthetase	tRNA	A0A1V0SK38	Klosneuvirus	33.9	1.5e-61
>prophage 9
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	1299361	1370973	1790372	integrase,head,tRNA,terminase,portal,tail,holin	Streptococcus_phage(61.02%)	89	1325946:1325962	1371019:1371035
SQG97183.1|1299361_1300279_-|tRNA	glycyl-tRNA synthetase alpha subunit	tRNA	NA	NA	NA	NA
SQG97184.1|1300649_1301183_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQG97185.1|1301314_1302154_-	2,5-diketo-D-gluconic acid reductase	NA	A0A2H4PQR8	Staphylococcus_phage	40.3	2.5e-50
SQG97186.1|1302276_1303425_-	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
SQG97187.1|1303542_1305174_-	Sodium-dependent phosphate transporter	NA	A0A1B1ITU5	uncultured_Mediterranean_phage	38.8	2.7e-05
SQG97188.1|1305375_1306098_+	lipoprotein	NA	NA	NA	NA	NA
SQG97189.1|1306226_1307069_-	EDD, DegV family domain-containing protein	NA	A0A1X9I5J4	Streptococcus_phage	61.9	1.3e-91
SQG97190.1|1307361_1307919_+	TetR family transcriptional regulator	NA	A0A1X9I6A2	Streptococcus_phage	60.3	3.2e-14
SQG97191.1|1307954_1308779_-	haloacid dehalogenase	NA	NA	NA	NA	NA
SQG97192.1|1308780_1309398_-	HAD superfamily hydrolase	NA	NA	NA	NA	NA
SQG97193.1|1309416_1309506_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG97194.1|1309594_1310572_-	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
SQG97195.1|1310721_1311072_-	tagatose-6-phosphate kinase	NA	NA	NA	NA	NA
SQG97196.1|1311081_1311597_-	galactose-6-phosphate isomerase subunit	NA	NA	NA	NA	NA
SQG97197.1|1311611_1312037_-	galactose-6-phosphate isomerase subunit	NA	A0A222YX14	Synechococcus_phage	27.9	1.4e-06
SQG97198.1|1312293_1313745_-	PTS system galactitol-specific family transporter subunit IIC	NA	NA	NA	NA	NA
SQG97199.1|1313770_1314076_-	PTS system galactose-specific transporter subunit IIB	NA	NA	NA	NA	NA
SQG97200.1|1314068_1314542_-	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein	NA	NA	NA	NA	NA
SQG97201.1|1314778_1315549_+	lactose phosphotransferase system repressor	NA	A0A077SK06	Escherichia_phage	27.8	6.4e-21
SQG97202.1|1315752_1315956_-	copper chaperone	NA	NA	NA	NA	NA
SQG97203.1|1315969_1318201_-	copper-exporting ATPase	NA	A0A218MNH6	uncultured_virus	37.5	2.6e-115
SQG97204.1|1318200_1318635_-	copAB ATPase metal-fist type repressor	NA	NA	NA	NA	NA
SQG97205.1|1318806_1319796_+	esterase / lipase	NA	NA	NA	NA	NA
SQG97206.1|1319926_1320277_-	truncated ribosome-binding factor A	NA	NA	NA	NA	NA
SQG97207.1|1320482_1323344_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.2	4.5e-19
SQG97208.1|1323363_1323666_-	ribosomal protein in infB 5'region	NA	NA	NA	NA	NA
SQG97209.1|1323658_1323955_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQG97210.1|1323970_1325116_-	transcription elongation factor	NA	NA	NA	NA	NA
SQG97211.1|1325302_1325839_-	ribosome maturation factor rimP	NA	NA	NA	NA	NA
1325946:1325962	attL	AAGGAGAGGAGGGGATT	NA	NA	NA	NA
SQG97212.1|1326083_1326263_-	paratox	NA	A3F673	Streptococcus_phage	79.7	5.2e-19
SQG97213.1|1326329_1327124_-	streptococcal phage DNAse	NA	A7J2B8	Streptococcus_phage	35.6	8.9e-26
SQG97214.1|1327368_1328583_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1P8VVM5	Streptococcus_phage	60.5	9.7e-165
SQG97215.1|1328579_1328693_-	phage membrane protein	NA	A7J2B4	Streptococcus_phage	82.9	2.2e-07
SQG97216.1|1328694_1329150_-|holin	holin	holin	A0A0M4R3G6	Streptococcus_phage	81.5	3.0e-63
SQG97217.1|1329160_1329775_-	phage protein	NA	Q938J7	Temperate_phage	79.4	1.8e-66
SQG97218.1|1329777_1330209_-	phage protein	NA	A3F661	Streptococcus_phage	90.0	7.6e-64
SQG97219.1|1330220_1332239_-	Phage infection protein	NA	Q938J9	Temperate_phage	69.4	3.0e-171
SQG97220.1|1332251_1333259_-	phage hyaluronidase	NA	A7J2A8	Streptococcus_phage	72.2	2.6e-139
SQG97221.1|1333255_1335292_-	phage protein	NA	A3F656	Streptococcus_phage	84.1	0.0e+00
SQG97222.1|1335288_1336068_-|tail	phage tail protein	tail	A3F655	Streptococcus_phage	55.5	1.9e-68
SQG97223.1|1336099_1339366_-	tape measure domain protein	NA	U6E979	Streptococcus_phage	30.4	1.6e-04
SQG97224.1|1339380_1339677_-	phage protein	NA	A0A0S2MYH1	Enterococcus_phage	42.2	1.3e-09
SQG97225.1|1339834_1340110_-	phage protein	NA	D7RWD6	Brochothrix_phage	45.9	1.2e-14
SQG97226.1|1340155_1340809_-|tail	phage major tail protein	tail	D7RWD5	Brochothrix_phage	50.9	1.9e-37
SQG97227.1|1340818_1341208_-	phage protein	NA	Q38611	Lactococcus_phage	68.2	3.5e-44
SQG97228.1|1341204_1341570_-	phage protein	NA	A0A097BY98	Enterococcus_phage	46.3	7.7e-17
SQG97229.1|1341550_1341745_-	phage protein	NA	NA	NA	NA	NA
SQG97230.1|1341744_1341858_-	phage protein	NA	NA	NA	NA	NA
SQG97231.1|1341854_1342208_-	phage protein	NA	A0A2H4J002	uncultured_Caudovirales_phage	49.6	9.7e-25
SQG97232.1|1342297_1342465_-	phage protein	NA	NA	NA	NA	NA
SQG97233.1|1342474_1343551_-|head	phage head protein	head	A0A2H4J022	uncultured_Caudovirales_phage	56.0	5.5e-103
SQG97234.1|1343550_1343931_-	structural protein	NA	A0A0K2CNR0	Brevibacillus_phage	37.9	5.2e-08
SQG97235.1|1343940_1344474_-	phage protein	NA	A0A141E0S7	Streptococcus_phage	83.9	1.4e-14
SQG97236.1|1344585_1345329_-	antirepressor	NA	M1PKL6	Streptococcus_phage	56.9	5.3e-73
SQG97237.1|1345330_1345579_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG97238.1|1345693_1345873_-	Uncharacterised protein	NA	M1NRK8	Streptococcus_phage	79.7	2.6e-18
SQG97239.1|1345968_1346238_-	phage protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	84.1	2.3e-34
SQG97240.1|1346297_1346477_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG97241.1|1346467_1348093_-|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	U6E9F1	Streptococcus_phage	43.8	1.1e-46
SQG97242.1|1348073_1349576_-|portal	phage portal protein, SPP1 family	portal	C9W9H5	Streptococcus_virus	54.5	2.4e-141
SQG97243.1|1349587_1350895_-|terminase	terminase large subunit	terminase	A0A2H4IYR5	uncultured_Caudovirales_phage	75.2	5.9e-184
SQG97244.1|1350872_1351304_-|terminase	phage terminase small subunit	terminase	A0A1S5SCD2	Streptococcus_phage	69.9	1.3e-47
SQG97245.1|1351402_1351588_+	phage protein	NA	D6PSW1	Lactobacillus_phage	54.0	1.7e-09
SQG97246.1|1351639_1352017_+	phage protein	NA	I3NLB2	Bifidobacterium_phage	44.0	3.3e-15
SQG97247.1|1352154_1352616_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG97248.1|1352634_1353549_-	phage protein	NA	NA	NA	NA	NA
SQG97249.1|1354126_1354561_-	autolysin regulatory protein	NA	J7KDQ1	Streptococcus_phage	97.9	6.2e-74
SQG97250.1|1354834_1355470_-	phage protein	NA	L0P368	Streptococcus_phage	69.4	2.0e-89
SQG97251.1|1355471_1355738_-	phage protein	NA	A7J287	Streptococcus_phage	60.0	1.6e-16
SQG97252.1|1355740_1355902_-	phage protein	NA	A7J285	Streptococcus_phage	94.3	1.2e-22
SQG97253.1|1355902_1357225_-	SNF2 family phage protein	NA	A7J284	Streptococcus_phage	98.0	4.6e-253
SQG97254.1|1357221_1357497_-	phage protein	NA	A7J283	Streptococcus_phage	96.7	8.6e-45
SQG97255.1|1357862_1360247_-	phage DNA primase/helicase protein	NA	A7J282	Streptococcus_phage	97.6	8.8e-287
SQG97256.1|1360251_1362183_-	phage DNA polymerase	NA	A7J280	Streptococcus_phage	87.8	0.0e+00
SQG97257.1|1362225_1362789_-	phage protein	NA	D2J040	Enterococcus_phage	57.9	7.4e-51
SQG97258.1|1362802_1363960_-	phage protein	NA	A7J278	Streptococcus_phage	99.7	1.7e-219
SQG97259.1|1363959_1364259_-	phage protein	NA	A7J277	Streptococcus_phage	92.9	1.0e-38
SQG97260.1|1364346_1364550_-	phage protein	NA	A7J276	Streptococcus_phage	100.0	9.4e-33
SQG97261.1|1364546_1364699_-	phage protein	NA	A7J275	Streptococcus_phage	100.0	4.4e-19
SQG97262.1|1364695_1365079_-	phage protein	NA	A7J274	Streptococcus_phage	99.2	6.1e-65
SQG97263.1|1365075_1365282_-	phage protein	NA	NA	NA	NA	NA
SQG97264.1|1365274_1365445_-	phage protein	NA	A7J273	Streptococcus_phage	89.3	2.0e-20
SQG97265.1|1365441_1365717_-	phage protein	NA	A7J272	Streptococcus_phage	95.6	1.7e-45
SQG97266.1|1365775_1365985_-	phage protein	NA	M1Q1B4	Streptococcus_phage	53.6	7.7e-14
SQG97267.1|1366275_1366623_+	Cro/CI family phage transcriptional regulator	NA	A0A126GGQ7	Streptococcus_phage	73.5	1.5e-41
SQG97268.1|1366626_1367013_+	peptidase	NA	Q7Y4M1	Streptococcus_phage	58.4	2.2e-38
SQG97269.1|1367137_1368859_+	prophage Lp2 protein 4	NA	NA	NA	NA	NA
SQG97270.1|1368915_1369773_+	Site-specific DNA methylase	NA	A0A2H4UUI2	Bodo_saltans_virus	29.3	9.9e-15
SQG97271.1|1369893_1370973_+|integrase	integrase	integrase	A7J266	Streptococcus_phage	93.3	7.5e-177
1371019:1371035	attR	AAGGAGAGGAGGGGATT	NA	NA	NA	NA
>prophage 10
LS483415	Streptococcus pyogenes strain NCTC8304 genome assembly, chromosome: 1	1790372	1714595	1730328	1790372	tRNA	Streptococcus_phage(61.54%)	22	NA	NA
SQG97573.1|1714595_1715387_-	transcriptional regulator	NA	A0A1S5SE31	Streptococcus_phage	48.5	7.5e-09
SQG97574.1|1715478_1715712_+	transcriptional regulator	NA	NA	NA	NA	NA
SQG97575.1|1715766_1716174_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	68.7	8.5e-49
SQG97576.1|1716187_1716805_+	pRha family phage regulatory protein	NA	A0A159B6D5	Gordonia_phage	38.8	2.2e-11
SQG97577.1|1717050_1717383_+	phage protein	NA	NA	NA	NA	NA
SQG97578.1|1717379_1717601_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG97579.1|1717603_1717795_+	phage protein	NA	NA	NA	NA	NA
SQG97580.1|1717806_1718136_+	phage protein	NA	NA	NA	NA	NA
SQG97581.1|1718138_1718411_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
SQG97582.1|1718411_1719269_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	74.8	2.6e-124
SQG97583.1|1719237_1720926_+	phage/plasmid primase, P4 family, C-terminal domain protein	NA	A0A1X9I717	Streptococcus_phage	82.1	2.5e-259
SQG97584.1|1721212_1721386_+	Uncharacterised protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
SQG97585.1|1721391_1721565_+	phage protein	NA	NA	NA	NA	NA
SQG97586.1|1721566_1722076_+	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.1e-29
SQG97587.1|1722149_1722638_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
SQG97588.1|1723037_1723400_+	phage protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	1.3e-05
SQG97589.1|1723374_1723758_+	phage protein	NA	Q938L8	Temperate_phage	41.7	3.7e-14
SQG97590.1|1723958_1724621_+	secreted phage protein	NA	NA	NA	NA	NA
SQG97591.1|1725017_1727573_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	23.4	3.0e-43
SQG97592.1|1727559_1727766_-	cytoplasmic protein	NA	NA	NA	NA	NA
SQG97593.1|1727908_1728346_-	arginine repressor	NA	NA	NA	NA	NA
SQG97594.1|1728636_1730328_+|tRNA	arginyl-tRNA synthetase	tRNA	A0A2I2L3K1	Orpheovirus	32.4	1.9e-73
