The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483392	Haemophilus influenzae strain NCTC11931 genome assembly, chromosome: 1	2044007	1098404	1191972	2044007	portal,holin,head,lysis,capsid,terminase,protease,tail	Mannheimia_phage(27.27%)	79	NA	NA
SQG36329.1|1098404_1098869_+|protease	metalloprotease	protease	NA	NA	NA	NA
SQG36330.1|1098887_1099673_+	haloacid dehalogenase-like protein	NA	NA	NA	NA	NA
SQG36331.1|1099709_1101509_-	long chain fatty acid CoA ligase	NA	A0A1V0SBX8	Catovirus	26.2	7.4e-44
SQG36332.1|1101702_1102722_-	glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQG36333.1|1102972_1103599_+	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	36.2	1.5e-20
SQG36334.1|1103661_1103928_+	RNA polymerase subunit omega	NA	NA	NA	NA	NA
SQG36335.1|1104347_1106462_+	bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	38.8	2.5e-11
SQG36336.1|1106458_1108540_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
SQG36337.1|1108569_1109379_+	glutamate racemase	NA	NA	NA	NA	NA
SQG36338.1|1109589_1110735_+	L-lactate dehydrogenase, FMN-linked	NA	NA	NA	NA	NA
SQG36339.1|1116544_1117474_+	DNA-binding transcriptional activator, homocysteine-binding	NA	NA	NA	NA	NA
SQG36340.1|1117483_1118203_+	branched-chain amino acid permease	NA	NA	NA	NA	NA
SQG36341.1|1118199_1118613_+	branched-chain amino acid permease	NA	NA	NA	NA	NA
SQG36342.1|1118630_1118864_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
SQG36343.1|1118939_1120523_-	peptide chain release factor 3	NA	D0R0F5	Streptococcus_phage	26.0	1.2e-29
SQG36344.1|1120795_1121584_+	enoyl-ACP reductase	NA	NA	NA	NA	NA
SQG36345.1|1121663_1123643_+	ribonuclease II	NA	NA	NA	NA	NA
SQG36346.1|1123697_1125335_+	Adhesin Hia	NA	NA	NA	NA	NA
SQG36347.1|1125571_1126213_+	allophanate hydrolase subunit 1	NA	NA	NA	NA	NA
SQG36348.1|1126209_1127139_+	allophanate hydrolase subunit 2	NA	NA	NA	NA	NA
SQG36349.1|1127125_1127863_+	lactam utilization protein	NA	NA	NA	NA	NA
SQG36350.1|1127906_1129100_+	Mn2+ and Fe2+ transporter of the NRAMP family	NA	NA	NA	NA	NA
SQG36351.1|1129176_1130511_-	argininosuccinate synthetase	NA	A0A140XAJ5	Dickeya_phage	79.4	6.4e-53
SQG36352.1|1130687_1131560_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A0M4JBD3	Mollivirus	35.7	7.4e-50
SQG36353.1|1131724_1134073_-	penicillin-binding protein 1b	NA	NA	NA	NA	NA
SQG36354.1|1134079_1134478_-	Uncharacterised protein family (UPF0231)	NA	NA	NA	NA	NA
SQG36355.1|1134434_1134779_-	iron-sulfur cluster insertion protein ErpA	NA	A0A2H4N7M3	Lake_Baikal_phage	48.6	1.7e-26
SQG36356.1|1134915_1135722_+	methionine aminopeptidase	NA	NA	NA	NA	NA
SQG36357.1|1135814_1138406_+	uridylyltransferase	NA	NA	NA	NA	NA
SQG36358.1|1138556_1138778_-	Sel1 domain-containing protein	NA	NA	NA	NA	NA
SQG36359.1|1139297_1140365_+	UDP-GlcNAc:undecaprenylphosphate GlcNAc-1-phosphate transferase	NA	NA	NA	NA	NA
SQG36360.1|1140762_1141311_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	41.2	7.0e-30
SQG36361.1|1141381_1142422_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
SQG36362.1|1142579_1142837_+	phosphohistidinoprotein-hexose phosphotransferase component of PTS system (Hpr)	NA	NA	NA	NA	NA
SQG36363.1|1142916_1144644_+	PEP-protein phosphotransferase of PTS system (enzyme I)	NA	A0A1V0SGR7	Hokovirus	32.6	1.3e-16
SQG36364.1|1144703_1145204_+	glucose-specific enzyme IIA component of PTS	NA	NA	NA	NA	NA
SQG36365.1|1145550_1145916_+	putative outer membrane protein	NA	NA	NA	NA	NA
SQG36366.1|1145979_1146645_+	DNA-binding response regulator in two-component regulatory system with QseC	NA	NA	NA	NA	NA
SQG36367.1|1146641_1147997_+	sensory histidine kinase in two-component regulatory system with QseB	NA	NA	NA	NA	NA
SQG36368.1|1148355_1150299_+|holin	choline transporter of high affinity	holin	A0A2I7QNT1	Vibrio_phage	24.8	2.0e-18
SQG36369.1|1150335_1151811_-	aminopeptidase A	NA	Q6GYZ8	Mycoplasma_phage	35.2	1.1e-45
SQG36370.1|1151917_1153021_+	permease	NA	NA	NA	NA	NA
SQG36371.1|1153017_1154094_+	permease	NA	NA	NA	NA	NA
SQG36372.1|1154287_1156558_+	5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase	NA	NA	NA	NA	NA
SQG36373.1|1157201_1157984_-|portal	portal vertex protein	portal	Q19UT6	Mannheimia_phage	64.4	1.3e-93
SQG36374.1|1158070_1159111_-	Terminase, ATPase subunit	NA	Q19UT5	Mannheimia_phage	58.9	1.3e-114
SQG36375.1|1159647_1159833_+|capsid	Probable bacteriophage capsid scaffolding protein	capsid	NA	NA	NA	NA
SQG36376.1|1159854_1160904_+|capsid	major capsid protein	capsid	Q19UT3	Mannheimia_phage	51.3	2.8e-88
SQG36377.1|1160915_1161401_+|terminase	terminase, endonuclease subunit	terminase	Q19US0	Mannheimia_phage	43.5	1.0e-24
SQG36378.1|1161779_1162286_+|head	putative phage head completion	head	A0A0M3LNL8	Mannheimia_phage	51.0	3.7e-33
SQG36379.1|1162285_1162495_+|tail	Probable bacteriophage tail protein X	tail	A0A1S6KZY4	Salmonella_phage	40.6	3.5e-06
SQG36380.1|1162496_1162718_+|holin	holin	holin	NA	NA	NA	NA
SQG36381.1|1162710_1163229_+	phage-like lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	46.6	4.3e-37
SQG36382.1|1163213_1163564_+|lysis	phage lysis regulatory protein, LysB family	lysis	NA	NA	NA	NA
SQG36383.1|1163738_1164035_+	putative zinc finger DksA/TraR C4-type	NA	NA	NA	NA	NA
SQG36384.1|1164547_1164943_+|tail	phage-related tail protein	tail	NA	NA	NA	NA
SQG36385.1|1165044_1165320_+|tail	phage-related tail protein	tail	NA	NA	NA	NA
SQG36386.1|1165356_1166484_+|tail	phage-like tail protein	tail	V5YUN9	Pseudomonas_phage	37.2	3.5e-44
SQG36387.1|1166619_1167993_-	Na+-dependent transporters of the SNF family	NA	NA	NA	NA	NA
SQG36388.1|1168051_1168687_-	DNA glycosylase and apyrimidinic (AP) lyase	NA	NA	NA	NA	NA
SQG36389.1|1168866_1169574_-	inner membrane NADH-quinone reductase	NA	NA	NA	NA	NA
SQG36390.1|1169575_1170199_-	oxidoreductase	NA	NA	NA	NA	NA
SQG36391.1|1170198_1171275_-	inner membrane oxidoreductase	NA	NA	NA	NA	NA
SQG36392.1|1171279_1173760_-	electron transport complex protein RnfC	NA	NA	NA	NA	NA
SQG36393.1|1173760_1174342_-	electron transport complex protein RnfB	NA	NA	NA	NA	NA
SQG36394.1|1174429_1175008_-	inner membrane subunit	NA	NA	NA	NA	NA
SQG36395.1|1175355_1176417_-	inner membrane peptidase	NA	A0A2H4UUF9	Bodo_saltans_virus	31.7	7.4e-20
SQG36396.1|1176616_1177282_+	Uncharacterized protein conserved in bacteria (DUF2057)	NA	NA	NA	NA	NA
SQG36397.1|1177349_1179506_+	inner membrane protein	NA	NA	NA	NA	NA
SQG36398.1|1179603_1180146_-	3-deoxy-D-manno-octulosonate 8-phosphate phosphatase	NA	NA	NA	NA	NA
SQG36399.1|1180155_1181091_-	arabinose-5-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	35.5	1.2e-42
SQG36400.1|1181704_1182376_-	regulator of cell morphogenesis and cell wall metabolism	NA	NA	NA	NA	NA
SQG36401.1|1183924_1184407_+	molybdopterin biosynthesis, protein C	NA	NA	NA	NA	NA
SQG36402.1|1184408_1184654_+	molybdopterin synthase, small subunit	NA	NA	NA	NA	NA
SQG36403.1|1184654_1185107_+	molybdopterin synthase, large subunit	NA	NA	NA	NA	NA
SQG36404.1|1185161_1187807_-	paraquat-inducible protein B-like protein	NA	NA	NA	NA	NA
SQG36405.1|1187790_1188873_-	paraquat-inducible protein A-like protein	NA	NA	NA	NA	NA
SQG36406.1|1189224_1189863_+	structural transport element	NA	NA	NA	NA	NA
SQG36407.1|1189890_1191972_+|protease	carboxy-terminal protease	protease	A0A0R6PIZ1	Moraxella_phage	32.3	4.2e-83
>prophage 2
LS483392	Haemophilus influenzae strain NCTC11931 genome assembly, chromosome: 1	2044007	1246539	1426569	2044007	portal,integrase,tRNA,holin,head,lysis,terminase,capsid,transposase,plate,protease,tail	Mannheimia_phage(31.93%)	232	1311330:1311349	1431809:1431828
SQG36459.1|1246539_1247727_+|tRNA	tyrosyl-tRNA synthetase	tRNA	NA	NA	NA	NA
SQG36460.1|1247790_1248738_-	ribose-phosphate pyrophosphokinase	NA	A0A1V0SHF7	Hokovirus	34.4	1.8e-41
SQG36461.1|1248739_1249693_-	4-diphosphocytidyl-2-methyl-D-erythritol synthase	NA	NA	NA	NA	NA
SQG36462.1|1249692_1250322_-	molecular chaperone LolB	NA	NA	NA	NA	NA
SQG36463.1|1250377_1251634_-|tRNA	fused tRNA nucleotidyl transferase/2'3'-cyclic phosphodiesterase/2'nucleotidase and phosphatase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	47.0	1.1e-94
SQG36464.1|1251640_1252252_-	signal transduction protein (SH3 domain)	NA	NA	NA	NA	NA
SQG36465.1|1252317_1253580_-	putative phosphate permease	NA	E5ESL8	Bathycoccus_sp._RCC1105_virus	35.4	2.7e-29
SQG36466.1|1253604_1254285_-	phosphate transport regulator	NA	NA	NA	NA	NA
SQG36467.1|1254507_1254948_+	membrane protein	NA	NA	NA	NA	NA
SQG36468.1|1254986_1255274_+	Uncharacterized low-complexity protein	NA	NA	NA	NA	NA
SQG36469.1|1255334_1256258_+	Protein of uncharacterised function (DUF692)	NA	NA	NA	NA	NA
SQG36470.1|1256247_1256964_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQG36471.1|1257285_1258332_+	adenylate cyclase	NA	NA	NA	NA	NA
SQG36472.1|1258787_1260164_+	repair protein	NA	NA	NA	NA	NA
SQG36473.1|1260243_1260723_+	DNA-binding transcriptional dual regulator, leucine-binding	NA	NA	NA	NA	NA
SQG36474.1|1260724_1263484_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	42.3	2.5e-83
SQG36475.1|1263501_1264119_+	chaperone for lipoproteins	NA	NA	NA	NA	NA
SQG36476.1|1264179_1265520_+	recombination factor protein RarA	NA	G3MBE0	Bacillus_virus	39.6	9.6e-81
SQG36477.1|1265609_1266752_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36478.1|1266761_1267985_-	modification methylase BepI-like	NA	E5EQN8	Micromonas_sp._RCC1109_virus	34.2	4.1e-46
SQG36479.1|1268238_1269537_-	5-enolpyruvylshikimate-3-phosphate synthetase	NA	NA	NA	NA	NA
SQG36480.1|1269536_1270373_-	formyltetrahydrofolate hydrolase	NA	NA	NA	NA	NA
SQG36481.1|1270443_1270848_-	DNA binding protein	NA	NA	NA	NA	NA
SQG36482.1|1271298_1272819_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
SQG36483.1|1273085_1274807_+	acetolactate synthase III, large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	29.0	2.8e-56
SQG36484.1|1274806_1275298_+	acetolactate synthase III, thiamin-dependent, small subunit	NA	NA	NA	NA	NA
SQG36485.1|1275583_1277317_-|tRNA	arginyl-tRNA synthetase	tRNA	A0A2K9L2F0	Tupanvirus	35.4	6.8e-87
SQG36486.1|1277396_1277966_+	metal-binding protein	NA	NA	NA	NA	NA
SQG36487.1|1277971_1278061_+	glucose-6-phosphate isomerase	NA	NA	NA	NA	NA
SQG36488.1|1278044_1278269_+	lipoprotein	NA	NA	NA	NA	NA
SQG36489.1|1278291_1278756_+	outer membrane lipoprotein PCP	NA	NA	NA	NA	NA
SQG36490.1|1278881_1279940_-	UDP-GlcNAc--lipooligosaccharide N-acetylglucosamine glycosyltransferase	NA	A0A1V0SAH6	Catovirus	38.5	4.8e-11
SQG36491.1|1280257_1280356_-|transposase	IS1016 transposase	transposase	NA	NA	NA	NA
SQG36492.1|1280590_1282240_-	glucosephosphate isomerase	NA	NA	NA	NA	NA
SQG36493.1|1282336_1283419_-	alanine racemase 1, PLP-binding, biosynthetic	NA	A0A0P0YM39	Yellowstone_lake_mimivirus	30.4	1.6e-33
SQG36494.1|1283428_1284835_-	replicative DNA helicase	NA	O80281	Escherichia_phage	68.3	4.4e-169
SQG36495.1|1284973_1286410_-	pyruvate kinase	NA	NA	NA	NA	NA
SQG36496.1|1286940_1287942_+|integrase	putative integrase/recombinase	integrase	A0A0M3LRG1	Mannheimia_phage	62.5	9.2e-113
SQG36497.1|1287972_1288257_-	Uncharacterised protein	NA	A0A0M3LQ35	Mannheimia_phage	50.0	3.2e-18
SQG36498.1|1288256_1288778_-	Uncharacterised protein	NA	A0A0M3LTD8	Mannheimia_phage	41.8	1.6e-28
SQG36499.1|1288790_1289000_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36500.1|1289010_1289202_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36501.1|1289220_1291407_-	Probable bacteriophage replication protein A	NA	Q94N00	Haemophilus_virus	42.1	4.6e-165
SQG36502.1|1291416_1291725_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36503.1|1291740_1291854_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36504.1|1291850_1292093_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36505.1|1292096_1292477_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36506.1|1292494_1292755_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36507.1|1292847_1293138_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36508.1|1293264_1293507_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36509.1|1293503_1293743_-	Uncharacterized protein conserved in bacteria, prophage-related	NA	NA	NA	NA	NA
SQG36510.1|1293878_1294586_+	phage repressor	NA	A0A0M3LPF9	Mannheimia_phage	35.9	3.7e-31
SQG36511.1|1294594_1295101_+	BRCT domain type II	NA	Q19UP0	Mannheimia_phage	43.7	1.3e-35
SQG36512.1|1295097_1295337_+	Excalibur calcium-binding domain	NA	NA	NA	NA	NA
SQG36513.1|1295362_1296556_-	regulator of late gene expression	NA	R9QBT3	Mannheimia_phage	50.3	5.7e-101
SQG36514.1|1296555_1296993_-|tail	phage-related tail protein	tail	A0A0M3LQ18	Mannheimia_phage	57.4	3.5e-40
SQG36515.1|1296992_1297154_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36516.1|1297321_1297468_-|tail	Probable bacteriophage tail protein E+E'	tail	E5E3Q0	Burkholderia_phage	65.0	2.2e-07
SQG36517.1|1297467_1297767_-|tail	Probable bacteriophage tail protein E	tail	A0A0F7LBN9	Escherichia_phage	40.7	9.7e-10
SQG36518.1|1297850_1298357_-|tail	phage-related tail protein	tail	Q19UP8	Mannheimia_phage	58.9	1.2e-52
SQG36519.1|1298360_1299545_-|tail	phage tail sheath-like protein	tail	A0A1S6KZY7	Salmonella_phage	48.5	1.3e-102
SQG36520.1|1300226_1300490_+	Uncharacterised protein	NA	F6MIM3	Haemophilus_phage	77.9	2.1e-32
SQG36521.1|1300528_1301374_-	D12 class N6 adenine-specific DNA methyltransferase	NA	F6MIM2	Haemophilus_phage	72.1	1.2e-118
SQG36522.1|1301435_1301555_-	mu com-like protein	NA	NA	NA	NA	NA
SQG36523.1|1301730_1302219_-	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	54.4	6.8e-45
SQG36524.1|1302211_1302820_-	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	80.0	7.4e-81
SQG36525.1|1302831_1305369_-|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	52.4	8.8e-168
SQG36526.1|1305377_1305917_-|tail	Probable bacteriophage tail protein gpI	tail	Q19UQ4	Mannheimia_phage	53.4	2.1e-50
SQG36527.1|1305903_1306818_-|plate	phage-like baseplate assembly protein	plate	Q19UQ5	Mannheimia_phage	59.9	7.9e-95
SQG36528.1|1306814_1307153_-|plate	baseplate assembly protein W	plate	Q19UQ6	Mannheimia_phage	56.6	5.8e-19
SQG36529.1|1307154_1307748_-|plate	phage P2-like baseplate assembly protein	plate	A0A0M3LPY9	Mannheimia_phage	65.5	4.6e-43
SQG36530.1|1307856_1310595_-|tail	phage-like tail protein	tail	V5YUN9	Pseudomonas_phage	35.4	2.7e-82
SQG36531.1|1310665_1310938_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36532.1|1310915_1311374_-|tail	Probable bacteriophage tail completion protein	tail	A0A2H4J927	uncultured_Caudovirales_phage	51.1	4.6e-27
1311330:1311349	attL	AATAAGTGCGGTCAATTTTG	NA	NA	NA	NA
SQG36533.1|1311373_1311844_-|tail	Probable bacteriophage tail completion protein	tail	E5G6N3	Salmonella_phage	47.1	5.6e-28
SQG36534.1|1311840_1312056_-	DnaK suppressor protein	NA	A0A0M3LS11	Mannheimia_phage	47.9	1.4e-10
SQG36535.1|1312230_1312581_-|lysis	phage lysis regulatory protein, LysB family	lysis	NA	NA	NA	NA
SQG36536.1|1312565_1313084_-	phage-like lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	46.6	4.3e-37
SQG36537.1|1313076_1313298_-|holin	holin	holin	NA	NA	NA	NA
SQG36538.1|1313299_1313509_-|tail	Probable bacteriophage tail protein X	tail	A0A1S6KZY4	Salmonella_phage	40.6	3.5e-06
SQG36539.1|1313508_1314015_-|head	putative phage head completion	head	A0A0M3LNL8	Mannheimia_phage	51.0	3.7e-33
SQG36540.1|1314307_1314970_-|terminase	terminase, endonuclease subunit	terminase	Q19US0	Mannheimia_phage	45.8	7.1e-45
SQG36541.1|1314969_1316001_-|capsid	major capsid protein	capsid	Q19UT3	Mannheimia_phage	56.6	2.0e-102
SQG36542.1|1316011_1316839_-|capsid	Probable bacteriophage capsid scaffolding protein	capsid	Q19UT4	Mannheimia_phage	52.9	7.5e-68
SQG36543.1|1317003_1318779_+	Terminase, ATPase subunit	NA	A0A0M3LRV4	Mannheimia_phage	64.3	2.5e-217
SQG36544.1|1318788_1319799_+|portal	portal vertex protein	portal	Q19UT6	Mannheimia_phage	60.4	1.4e-116
SQG36545.1|1320473_1321664_+|integrase	prophage CP4-57-like integrase	integrase	A0A1V0E8G8	Vibrio_phage	37.0	5.7e-69
SQG36546.1|1321717_1321918_-	Predicted transcriptional regulator	NA	NA	NA	NA	NA
SQG36547.1|1322044_1322293_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36548.1|1322366_1322489_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36549.1|1322501_1322693_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36550.1|1322866_1323550_-	C5 methylase	NA	A0A141DZL1	Streptococcus_phage	57.5	7.5e-66
SQG36551.1|1323539_1323695_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36552.1|1323691_1324051_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36553.1|1324047_1324284_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36554.1|1324604_1324784_+	Uncharacterised protein	NA	Q19US2	Mannheimia_phage	62.1	1.8e-11
SQG36555.1|1324843_1325278_-	ssDNA-binding protein	NA	S5M9Z7	Pseudoalteromonas_phage	41.7	1.2e-19
SQG36556.1|1325277_1325922_-	Uncharacterised protein	NA	A0A0M3LP90	Mannheimia_phage	70.5	7.6e-84
SQG36557.1|1326130_1326751_-	prophage antirepressor	NA	Q7Y5X0	Haemophilus_phage	48.8	2.7e-46
SQG36558.1|1327113_1327206_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36559.1|1327209_1327701_-	putative Lhr family helicase, phage associatd	NA	NA	NA	NA	NA
SQG36560.1|1327840_1327972_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36561.1|1328221_1328440_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36562.1|1328399_1328570_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36563.1|1328849_1329071_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36564.1|1329085_1329256_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG36565.1|1329709_1330618_-	Uncharacterised protein	NA	A0A1R3Y6Z6	Salmonella_virus	39.9	1.5e-56
SQG36566.1|1330819_1331512_-	phage repressor	NA	F1C5C2	Cronobacter_phage	30.8	5.4e-19
SQG36567.1|1331617_1331866_+	phage transcriptional regulatory protein/antirepressor Cro	NA	Q19UN8	Mannheimia_phage	50.0	3.6e-10
SQG36568.1|1331886_1332183_+	phage aaphi23	NA	Q7Y5W3	Haemophilus_phage	69.4	1.3e-30
SQG36569.1|1332230_1332899_+	Probable phage repressor protein	NA	D0UIL6	Aggregatibacter_phage	53.8	3.7e-57
SQG36570.1|1332895_1333654_+	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	68.8	4.8e-61
SQG36571.1|1333638_1334280_+	phage replication protein	NA	NA	NA	NA	NA
SQG36572.1|1334276_1334858_+	DNA methylase	NA	A0A0M3LNW2	Mannheimia_phage	56.1	1.9e-49
SQG36573.1|1334847_1335264_+	recombination protein NinB	NA	Q7Y5V7	Haemophilus_phage	77.4	1.6e-55
SQG36574.1|1335356_1335905_+	ning recombination protein	NA	D0UIK8	Aggregatibacter_phage	68.2	5.1e-65
SQG36575.1|1335906_1336275_+	putative phage anti-termination protein Q	NA	Q7Y5V5	Haemophilus_phage	62.6	1.5e-36
SQG36576.1|1336440_1336998_+	Uncharacterized conserved protein	NA	A0A1S5SAB0	Streptococcus_phage	36.7	2.6e-24
SQG36577.1|1337126_1337588_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG36578.1|1337897_1338761_+	putative antirepressor protein	NA	Q0H8C7	Salmonella_phage	45.4	3.3e-58
SQG36579.1|1339028_1339280_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36580.1|1339260_1339803_+	DLP12 prophage lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	52.0	3.1e-46
SQG36581.1|1339775_1340111_+	putative bacteriophage protein	NA	Q7Y5U9	Haemophilus_phage	66.7	1.5e-27
SQG36582.1|1340574_1341048_+	Protein of uncharacterised function (DUF1441)	NA	K7PJY2	Enterobacterial_phage	53.0	1.9e-39
SQG36583.1|1341050_1343171_+	gifsy-2 prophage protein	NA	K7PH52	Enterobacterial_phage	66.7	4.9e-273
SQG36584.1|1343167_1343386_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36585.1|1343389_1344913_+|capsid	putative phage capsid protein	capsid	K7PJP3	Enterobacteria_phage	58.1	7.1e-157
SQG36586.1|1344884_1346891_+|protease	atp-dependent clp protease proteolytic subunit	protease	A0A1W6JT88	Pseudomonas_phage	56.6	8.4e-198
SQG36587.1|1346969_1347293_+	putative RecA/RadA recombinase	NA	NA	NA	NA	NA
SQG36588.1|1347273_1347585_+|tail	putative bacteriophage tail protein	tail	NA	NA	NA	NA
SQG36589.1|1347587_1348118_+|tail	putative phage minor tail protein	tail	M9NZH5	Enterobacteria_phage	42.4	2.9e-17
SQG36590.1|1348126_1348537_+|tail	minor tail protein u	tail	NA	NA	NA	NA
SQG36591.1|1348539_1349190_+	phage protein	NA	NA	NA	NA	NA
SQG36592.1|1349303_1349465_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36593.1|1349464_1349872_+	phage protein	NA	NA	NA	NA	NA
SQG36594.1|1349916_1350141_+	phage protein	NA	NA	NA	NA	NA
SQG36595.1|1350209_1350593_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQG36596.1|1350576_1350879_+	transcription regulator	NA	NA	NA	NA	NA
SQG36597.1|1350891_1351131_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36598.1|1351432_1351681_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36599.1|1351759_1355101_+|tail	putative tail protein	tail	A0A0E3JPV7	Enterobacteria_phage	28.0	5.0e-70
SQG36600.1|1355109_1355445_+|tail	putative phage minor tail protein	tail	NA	NA	NA	NA
SQG36601.1|1355496_1356147_+|tail	phage-like minor tail protein L	tail	J9Q7Y5	Salmonella_phage	40.6	1.3e-38
SQG36602.1|1356148_1356856_+|tail	phage-like tail assembly protein K	tail	Q3HQU3	Burkholderia_phage	44.3	2.1e-50
SQG36603.1|1356794_1357514_+|tail	putative phage tail assembly protein	tail	G8C7R3	Escherichia_phage	40.7	1.4e-33
SQG36604.1|1357517_1358936_+|tail	phage tail protein/putative Fels-1 prophage host specificity protein	tail	A0A0R6PIC9	Moraxella_phage	42.4	5.5e-111
SQG36605.1|1359000_1360248_+	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQG36606.1|1360300_1360576_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36607.1|1361039_1361270_+	Predicted transcriptional regulator	NA	A0A2K5B261	Erysipelothrix_phage	47.9	9.8e-10
SQG36608.1|1361262_1362324_+	DNA-cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	42.2	3.4e-65
SQG36609.1|1362342_1363566_+	DNA-cytosine methyltransferase	NA	G3CB01	Aeropyrum_pernix_spindle-shaped_virus	28.0	6.3e-31
SQG36610.1|1363579_1365292_+	5-methylcytosine-specific restriction enzyme B	NA	M1NSM1	Streptococcus_phage	31.7	6.1e-32
SQG36611.1|1365307_1366531_+	LlaJI restriction endonuclease	NA	NA	NA	NA	NA
SQG36612.1|1366601_1368278_+	chromosome segregation protein	NA	NA	NA	NA	NA
SQG36613.1|1368274_1368814_+	UvrD/REP helicase	NA	NA	NA	NA	NA
SQG36614.1|1368997_1369342_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36615.1|1369369_1369831_+	TFIIB zinc-binding	NA	NA	NA	NA	NA
SQG36616.1|1369820_1370627_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36617.1|1370661_1371993_-	relaxase/mobilization nuclease family protein	NA	NA	NA	NA	NA
SQG36618.1|1371993_1372353_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36619.1|1372685_1372946_+	Arsenical resistance operon repressor	NA	NA	NA	NA	NA
SQG36620.1|1373239_1373653_+	RNA polymerase sigma factor, sigma-70 family	NA	NA	NA	NA	NA
SQG36621.1|1373817_1376121_+	Superfamily II helicase	NA	NA	NA	NA	NA
SQG36622.1|1376117_1376354_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36623.1|1376862_1377018_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36624.1|1377116_1378430_+	Recombinase	NA	A0A0S2SXR4	Bacillus_phage	27.1	1.4e-23
SQG36625.1|1378395_1378821_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36626.1|1378820_1379267_+	Resolvase, N terminal domain	NA	NA	NA	NA	NA
SQG36627.1|1379283_1380486_+	Recombinase	NA	D2XR37	Bacillus_phage	24.5	1.5e-13
SQG36628.1|1380478_1380919_+	Resolvase, N terminal domain	NA	D2IZV7	Enterococcus_phage	35.6	2.3e-07
SQG36629.1|1380887_1381082_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36630.1|1381502_1382207_-	phage repressor	NA	F6MII3	Haemophilus_phage	37.8	2.8e-39
SQG36631.1|1382402_1382666_+	DNA-binding protein	NA	F6MII4	Haemophilus_phage	72.4	7.4e-30
SQG36632.1|1382679_1383558_+|transposase	phage transposase	transposase	F6MII5	Haemophilus_phage	56.9	1.1e-85
SQG36633.1|1383554_1384655_+|transposase	phage transposase	transposase	A0A0M3LPN5	Mannheimia_phage	56.4	6.4e-115
SQG36634.1|1384666_1385548_+|transposase	phage transposase	transposase	A0A0M3LP72	Mannheimia_phage	75.1	8.4e-118
SQG36635.1|1385558_1385855_+	sulfate transport protein cysz	NA	NA	NA	NA	NA
SQG36636.1|1385863_1386055_+	Uncharacterised protein	NA	F6MII8	Haemophilus_phage	57.6	9.5e-11
SQG36637.1|1386055_1386673_+	sulfate transport protein cysz	NA	A0A0M3LQ92	Mannheimia_phage	59.1	3.1e-66
SQG36638.1|1386857_1387067_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36639.1|1387059_1387224_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36640.1|1387220_1387475_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36641.1|1387471_1387642_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36642.1|1387638_1388100_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36643.1|1388110_1388665_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36644.1|1388677_1388926_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36645.1|1389031_1389580_+	Uncharacterised protein	NA	A0A0M3LPP6	Mannheimia_phage	50.8	7.4e-48
SQG36646.1|1389569_1389974_+	Mu-like phage E16 protein	NA	F6MIJ6	Haemophilus_phage	41.4	8.2e-20
SQG36647.1|1390075_1390663_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36648.1|1390723_1391272_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36649.1|1391395_1391824_+	Mor transcription activator family	NA	F6MIJ8	Haemophilus_phage	42.3	4.3e-27
SQG36650.1|1391904_1392411_+	hypothetical bacteriophage protein	NA	A0A0M3LSH2	Mannheimia_phage	67.9	2.5e-58
SQG36651.1|1392400_1392568_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36652.1|1392564_1392855_+	Protein of uncharacterised function (DUF2644)	NA	F6MIK0	Haemophilus_phage	61.3	1.8e-16
SQG36653.1|1392854_1393112_+	Protein of uncharacterised function (DUF2681)	NA	NA	NA	NA	NA
SQG36654.1|1393192_1393480_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36655.1|1393479_1393746_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36656.1|1393747_1394251_+	DNA-binding protein	NA	F6MIK6	Haemophilus_phage	51.2	2.1e-44
SQG36657.1|1394386_1395553_+	phage protein	NA	B7SDN0	Haemophilus_phage	79.6	3.2e-181
SQG36658.1|1395571_1396033_+	phage protein	NA	A0A0M3LQB7	Mannheimia_phage	74.0	2.1e-56
SQG36659.1|1396044_1397667_+	Mu-like prophage FluMu protein gp29	NA	B7SDN1	Haemophilus_phage	68.5	4.1e-203
SQG36660.1|1397650_1398952_+|head	SPP1 family phage head morphogenesis protein	head	B7SDN5	Haemophilus_phage	68.8	6.7e-172
SQG36661.1|1399086_1399503_+|tail	phage virion morphogenesis (tail completion) protein	tail	B7SDN8	Haemophilus_phage	66.7	6.2e-47
SQG36662.1|1399782_1400820_+	Mu phage protein I	NA	B7SDN9	Haemophilus_phage	46.7	1.2e-67
SQG36663.1|1400819_1401743_+	Mu bacteriophage protein T	NA	B7SDP1	Haemophilus_phage	74.9	6.7e-134
SQG36664.1|1401806_1402112_+	Uncharacterised protein	NA	B7SDP3	Haemophilus_phage	49.0	8.1e-20
SQG36665.1|1402121_1402553_+	Mu-like prophage protein GP36	NA	B7SDP4	Haemophilus_phage	61.6	2.7e-37
SQG36666.1|1402536_1403199_+	Mu-like prophage protein gp37	NA	A0A0M3LQJ7	Mannheimia_phage	45.0	1.6e-44
SQG36667.1|1403170_1403353_+	Uncharacterised protein	NA	A0A0M3LQM9	Mannheimia_phage	64.8	8.2e-12
SQG36668.1|1403345_1404761_+|tail	bacteriophage Mu tail sheath family protein	tail	B7SDP8	Haemophilus_phage	62.6	2.3e-157
SQG36669.1|1404770_1405142_+	Uncharacterised protein	NA	A0A0M3LRV6	Mannheimia_phage	64.2	4.4e-36
SQG36670.1|1405141_1405483_+	Uncharacterised protein	NA	A0A0M3LSI2	Mannheimia_phage	49.5	5.3e-20
SQG36671.1|1405750_1408039_+|tail	phage tail length determination protein	tail	A0A0M3LPB6	Mannheimia_phage	34.0	1.4e-95
SQG36672.1|1408042_1409380_+	putative phage virion protein	NA	F6MIL2	Haemophilus_phage	45.1	2.4e-108
SQG36673.1|1409369_1410494_+	bacteriophage Mu P family protein	NA	F6MIL3	Haemophilus_phage	72.1	3.5e-145
SQG36674.1|1410503_1411139_+|plate	phage baseplate assembly protein V	plate	A0A0M3LPA3	Mannheimia_phage	58.7	2.1e-62
SQG36675.1|1411208_1411559_+	phage GP46 family protein	NA	A0A0M3LQK5	Mannheimia_phage	75.0	1.4e-44
SQG36676.1|1411573_1412638_+|tail	Mu phage tail protein gp47	tail	F6MIL6	Haemophilus_phage	66.6	3.7e-128
SQG36677.1|1412634_1413231_+	Uncharacterized protein conserved in bacteria (DUF2313)	NA	F6MIL7	Haemophilus_phage	62.4	3.3e-65
SQG36678.1|1413234_1415367_+|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	63.8	1.4e-214
SQG36679.1|1415378_1415987_+	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	81.5	1.1e-81
SQG36680.1|1415979_1416465_+	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	53.5	2.0e-44
SQG36681.1|1417077_1418097_+	dihydro-orotate oxidase, FMN-linked	NA	NA	NA	NA	NA
SQG36682.1|1418096_1418921_+	TrpH	NA	NA	NA	NA	NA
SQG36683.1|1419016_1419625_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36684.1|1419752_1421147_-	fumarate hydratase	NA	NA	NA	NA	NA
SQG36685.1|1421382_1421817_+	DNA polymerase III subunit chi	NA	NA	NA	NA	NA
SQG36686.1|1421901_1422072_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36687.1|1422037_1422655_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQG36688.1|1422681_1422996_+	ASCH domain	NA	NA	NA	NA	NA
SQG36689.1|1423018_1423657_+|tRNA	valyl-tRNA synthetase	tRNA	NA	NA	NA	NA
SQG36690.1|1423704_1426569_+|tRNA	valyl-tRNA synthetase	tRNA	A0A1V0SK04	Klosneuvirus	37.5	2.3e-148
1431809:1431828	attR	CAAAATTGACCGCACTTATT	NA	NA	NA	NA
>prophage 3
LS483392	Haemophilus influenzae strain NCTC11931 genome assembly, chromosome: 1	2044007	1539879	1590958	2044007	tail,integrase,plate	Haemophilus_phage(35.29%)	73	1537119:1537136	1597106:1597123
1537119:1537136	attL	AAAGTGCGGTCAATTTTG	NA	NA	NA	NA
SQG36791.1|1539879_1540968_-	3-deoxy-D-arabino-heptulosonate-7-phosphate synthase	NA	A0A0B6VT43	Edwardsiella_phage	46.0	2.9e-80
SQG36792.1|1541987_1542251_+	Uncharacterised protein	NA	F6MIM3	Haemophilus_phage	79.1	1.4e-33
SQG36793.1|1542289_1543135_-	D12 class N6 adenine-specific DNA methyltransferase	NA	F6MIM2	Haemophilus_phage	70.7	3.1e-117
SQG36794.1|1543196_1543316_-	mu com-like protein	NA	NA	NA	NA	NA
SQG36795.1|1543491_1543992_-	Uncharacterised protein	NA	F6MIM0	Haemophilus_phage	61.6	1.7e-51
SQG36796.1|1543988_1544591_-	Uncharacterised protein	NA	Q94MX9	Haemophilus_virus	94.0	3.0e-98
SQG36797.1|1544602_1546828_-|tail	tail fiber protein	tail	Q94MY0	Haemophilus_virus	71.8	5.2e-249
SQG36798.1|1546837_1547413_-	Protein of uncharacterised function (DUF2612)	NA	D0UIH4	Aggregatibacter_phage	80.6	4.1e-89
SQG36799.1|1547412_1548555_-	Uncharacterized homolog of phage Mu protein gp47	NA	Q7Y5S4	Haemophilus_phage	86.6	1.8e-184
SQG36800.1|1548598_1549117_-	antirepressor protein	NA	G0ZNF0	Cronobacter_phage	49.2	1.3e-30
SQG36801.1|1549246_1549366_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36802.1|1549446_1550307_-	antirepressor protein	NA	A0A0M3LR56	Mannheimia_phage	56.8	4.3e-50
SQG36803.1|1550611_1551928_-	chromosome segregation ATPase	NA	X5JAC1	Clostridium_phage	49.4	7.0e-52
SQG36804.1|1552055_1552409_-	Uncharacterised protein	NA	Q7Y5S5	Haemophilus_phage	89.7	1.7e-58
SQG36805.1|1552410_1552569_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36806.1|1552663_1553308_-|plate	phage baseplate assembly protein V	plate	D0UIH7	Aggregatibacter_phage	81.3	1.3e-96
SQG36807.1|1553304_1554189_-	Phage protein D	NA	D0UIH8	Aggregatibacter_phage	90.2	1.3e-142
SQG36808.1|1554191_1554302_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36809.1|1554440_1554764_-	Uncharacterised protein	NA	Q7Y5S9	Haemophilus_phage	83.3	1.3e-47
SQG36810.1|1554757_1555534_-	Uncharacterised protein	NA	Q7Y5T0	Haemophilus_phage	71.4	9.1e-76
SQG36811.1|1555539_1557630_-	Uncharacterised protein	NA	Q7Y5T2	Haemophilus_phage	71.9	3.8e-225
SQG36812.1|1557780_1558191_-	Protein of uncharacterised function (DUF2669)	NA	Q776V6	Haemophilus_phage	72.3	3.1e-51
SQG36813.1|1558190_1558622_-	Protein of uncharacterised function (DUF3277)	NA	Q7Y5T4	Haemophilus_phage	92.3	2.4e-70
SQG36814.1|1558672_1560181_-	phage-like protein	NA	Q7Y5T5	Haemophilus_phage	86.7	3.9e-248
SQG36815.1|1560612_1560984_-	Uncharacterised protein	NA	Q776V7	Haemophilus_phage	71.5	6.8e-45
SQG36816.1|1560980_1561493_-	Uncharacterised protein	NA	Q7Y5T8	Haemophilus_phage	57.6	2.7e-44
SQG36817.1|1561493_1561856_-	Uncharacterised protein	NA	Q7Y5T9	Haemophilus_phage	67.2	2.4e-34
SQG36818.1|1561865_1562780_-	Uncharacterized protein conserved in bacteria	NA	Q7Y5U0	Haemophilus_phage	91.8	4.4e-154
SQG36819.1|1562790_1563234_-	Uncharacterised protein	NA	D0UIJ1	Aggregatibacter_phage	74.5	1.3e-50
SQG36820.1|1563247_1564351_-	Uncharacterized protein conserved in bacteria	NA	D0UIJ2	Aggregatibacter_phage	85.9	5.2e-141
SQG36821.1|1564440_1565874_-	plasmid RP4 TraN-like protein	NA	Q7Y5U5	Haemophilus_phage	73.0	2.4e-85
SQG36822.1|1565902_1567234_-	phage-associated protein, HI1409 family	NA	D0UIJ6	Aggregatibacter_phage	83.3	2.2e-210
SQG36823.1|1567235_1568639_-	Transposase and inactivated derivatives	NA	Q7Y5U7	Haemophilus_phage	88.4	1.5e-249
SQG36824.1|1568613_1569135_-	Uncharacterised protein	NA	Q716H4	Shigella_phage	52.8	4.9e-33
SQG36825.1|1569212_1569464_+	bacteriophage protein/plasmid stabilization system protein	NA	A0A1S5NR91	Burkholderia_phage	52.9	9.9e-16
SQG36826.1|1569447_1569795_+	transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	57.0	6.8e-23
SQG36827.1|1569989_1570325_-	putative bacteriophage protein	NA	Q7Y5U9	Haemophilus_phage	51.0	2.9e-18
SQG36828.1|1570297_1570840_-	DLP12 prophage lysozyme	NA	A0A0M3LPQ1	Mannheimia_phage	52.0	3.1e-46
SQG36829.1|1570820_1571072_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36830.1|1571328_1571838_-	Phage antitermination protein Q	NA	NA	NA	NA	NA
SQG36831.1|1571838_1572384_-	ning recombination protein	NA	D0UIK8	Aggregatibacter_phage	66.9	4.5e-61
SQG36832.1|1572383_1572473_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36833.1|1572755_1573184_+	Uncharacterised protein family (UPF0150)	NA	NA	NA	NA	NA
SQG36834.1|1573184_1573694_-	Protein of uncharacterised function (DUF1367)	NA	A0A0M3LR84	Mannheimia_phage	76.2	1.1e-69
SQG36835.1|1573698_1574289_-	DNA methylase	NA	A0A0M3LNW2	Mannheimia_phage	56.1	1.1e-49
SQG36836.1|1574285_1574912_-	Replication protein P	NA	A0A0M3LS65	Mannheimia_phage	37.4	3.7e-27
SQG36837.1|1574908_1575631_-	Uncharacterised protein	NA	D0UIL5	Aggregatibacter_phage	68.3	5.9e-61
SQG36838.1|1575627_1576302_-	Probable phage repressor protein	NA	D0UIL6	Aggregatibacter_phage	55.6	5.0e-62
SQG36839.1|1576350_1576791_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36840.1|1576845_1577085_-	regulatory protein	NA	A0A2I6PIE5	Escherichia_phage	49.2	7.0e-11
SQG36841.1|1577185_1577851_+	prophage repressor CI	NA	A0A0M3LSL8	Mannheimia_phage	52.1	1.4e-40
SQG36842.1|1577941_1578649_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36843.1|1578645_1579461_+	Protein of uncharacterised function (DUF3037)	NA	NA	NA	NA	NA
SQG36844.1|1579560_1579728_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36845.1|1580333_1580570_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36846.1|1580566_1580833_-	Uncharacterised protein	NA	A0A0N9STP5	Staphylococcus_phage	34.9	3.1e-07
SQG36847.1|1581006_1581699_-	Uncharacterised protein	NA	V5URE2	Shigella_phage	27.2	5.2e-14
SQG36848.1|1581699_1581879_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36849.1|1581984_1582248_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36850.1|1582503_1583109_+	Putative prophage antirepressor protein	NA	A0A0P0ZCS0	Stx2-converting_phage	50.0	2.8e-16
SQG36851.1|1583196_1583487_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36852.1|1583580_1583886_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36853.1|1583882_1584176_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36854.1|1584188_1585082_+	recombinational DNA repair protein, rece pathway	NA	A0A0M3LNU3	Mannheimia_phage	71.3	8.8e-115
SQG36855.1|1585083_1585734_+	Uncharacterised protein	NA	A0A0M3LP90	Mannheimia_phage	70.2	5.8e-84
SQG36856.1|1585733_1586168_+	ssDNA-binding protein	NA	R9TP78	Rhizobium_phage	37.4	5.7e-19
SQG36857.1|1586270_1586840_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36858.1|1586836_1587073_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36859.1|1587069_1587429_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36860.1|1587436_1588711_+	cytosine-specific methyltransferase	NA	A0A2I7QRH3	Vibrio_phage	46.9	7.7e-96
SQG36861.1|1588768_1589251_+	Uncharacterised protein	NA	A0A0M3LS47	Mannheimia_phage	42.0	1.1e-23
SQG36862.1|1589696_1589975_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG36863.1|1589971_1590958_-|integrase	integrase	integrase	A0A0M3LQN1	Mannheimia_phage	55.3	6.6e-95
1597106:1597123	attR	AAAGTGCGGTCAATTTTG	NA	NA	NA	NA
