assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475525.1_44738_D02	LS483384	Streptococcus pyogenes strain NCTC13743 genome assembly, chromosome: 1	1	769235-769335	1	CRISPRCasFinder	no		cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	Orphan	TATAATTAGACTATACCAATTTT	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	NA|262aa|up_6|LS483384.1_760618_761404_-,NA	NA|755aa|up_9|LS483384.1_756079_758344_+	cd04300, GT35_Glycogen_Phosphorylase, glycogen phosphorylase and similar proteins	NA|207aa|up_8|LS483384.1_758600_759221_-	pfam12978, DUF3862, Domain of Unknown Function with PDB structure (DUF3862)	NA|205aa|up_7|LS483384.1_759871_760486_+	COG0398, COG0398, Uncharacterized conserved protein [Function unknown]	NA|262aa|up_6|LS483384.1_760618_761404_-	NA	NA|233aa|up_5|LS483384.1_761413_762112_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|124aa|up_4|LS483384.1_762111_762483_-	COG1725, COG1725, Predicted transcriptional regulators [Transcription]	NA|1037aa|up_3|LS483384.1_762667_765778_+	PRK07279, dnaE, DNA polymerase III DnaE; Reviewed	NA|338aa|up_2|LS483384.1_765857_766871_+	PRK03202, PRK03202, ATP-dependent 6-phosphofructokinase	NA|501aa|up_1|LS483384.1_766933_768436_+	PRK05826, PRK05826, pyruvate kinase; Provisional	NA|186aa|up_0|LS483384.1_768653_769211_+	TIGR02227, Inactive_signal_peptidase_IA	NA|605aa|down_0|LS483384.1_769386_771201_+	PRK00331, PRK00331, isomerizing glutamine--fructose-6-phosphate transaminase	NA|112aa|down_1|LS483384.1_771396_771732_+	COG2824, PhnA, Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism [Inorganic ion transport and metabolism]	NA|214aa|down_2|LS483384.1_771838_772480_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|210aa|down_3|LS483384.1_772489_773119_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|279aa|down_4|LS483384.1_773134_773971_+	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|258aa|down_5|LS483384.1_774339_775113_+	pfam07373, CAMP_factor, CAMP factor (Cfa)	NA|412aa|down_6|LS483384.1_775482_776718_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|441aa|down_7|LS483384.1_776837_778160_-	COG1115, AlsT, Na+/alanine symporter [Amino acid transport and metabolism]	NA|773aa|down_8|LS483384.1_778688_781007_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|83aa|down_9|LS483384.1_781369_781618_+	COG2261, COG2261, Predicted membrane protein [Function unknown]
GCA_900475525.1_44738_D02	LS483384	Streptococcus pyogenes strain NCTC13743 genome assembly, chromosome: 1	2	962149-963042	2,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	Type II-A,Type II-B,Type II-C	GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC,GTTTTGGGACCATTCAAAACAGCATAGCTCTAAAAC	36,36,36	0	0	NA	NA	II-A:II-A:II-A	13,13,12	13	TypeII-A,TypeII-B,TypeII-C	cas3,DEDDh,cas5,cas8c,cas7,cas4,cas1,cas2,csn2,cas9,csm6,DinG,csa3	NA,NA|214aa|down_8|LS483384.1_972939_973581_-	NA|263aa|up_9|LS483384.1_951028_951817_-	COG4753, COG4753, Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain [Signal transduction mechanisms]	NA|550aa|up_8|LS483384.1_951820_953470_-	COG2972, COG2972, Predicted signal transduction protein with a C-terminal ATPase domain [Signal transduction mechanisms]	NA|276aa|up_7|LS483384.1_953605_954433_-	COG3716, ManZ, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IID [Carbohydrate transport and metabolism]	NA|270aa|up_6|LS483384.1_954429_955239_-	COG3715, ManY, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]	NA|164aa|up_5|LS483384.1_955255_955747_-	COG3444, COG3444, Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB [Carbohydrate transport and metabolism]	NA|142aa|up_4|LS483384.1_955773_956199_-	COG2893, ManX, Phosphotransferase system, mannose/fructose-specific component IIA [Carbohydrate transport and metabolism]	NA|340aa|up_3|LS483384.1_956405_957425_-	COG2855, COG2855, Predicted membrane protein [Function unknown]	NA|146aa|up_2|LS483384.1_957554_957992_-	PRK00222, PRK00222, peptide-methionine (R)-S-oxide reductase MsrB	NA|410aa|up_1|LS483384.1_958177_959407_-	PRK12678, PRK12678, transcription termination factor Rho; Provisional	NA|611aa|up_0|LS483384.1_959673_961506_-	PRK05433, PRK05433, GTP-binding protein LepA; Provisional	csn2|221aa|down_0|LS483384.1_963144_963807_-	cd09758, Csn2, CRISPR/Cas system-associated protein Csn2	cas2|104aa|down_1|LS483384.1_963796_964108_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|290aa|down_2|LS483384.1_964134_965004_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1369aa|down_3|LS483384.1_965003_969110_-	COG3513, COG3513, Predicted CRISPR-associated nuclease, contains McrA/HNH-nuclease and RuvC-like nuclease domain [Defense mechanisms]	NA|211aa|down_4|LS483384.1_969588_970221_-	COG4478, COG4478, Predicted membrane protein [Function unknown]	NA|255aa|down_5|LS483384.1_970220_970985_-	cd07530, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Escherichia coli UmpH UMP phosphatase/NagD nucleotide phosphatase and Mycobacterium tuberculosis Rv1692 glycerol 3-phosphate phosphatase	NA|251aa|down_6|LS483384.1_970984_971737_-	COG3884, FatA, Acyl-ACP thioesterase [Lipid metabolism]	NA|399aa|down_7|LS483384.1_971746_972943_-	PRK08599, PRK08599, oxygen-independent coproporphyrinogen III oxidase	NA|214aa|down_8|LS483384.1_972939_973581_-	NA	NA|452aa|down_9|LS483384.1_973714_975070_-	PRK14316, glmM, phosphoglucosamine mutase; Provisional
