The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	36591	49025	1847336		Synechococcus_phage(28.57%)	8	NA	NA
SQG18144.1|36591_40365_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	3.6e-40
SQG18145.1|40598_42053_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	3.7e-54
SQG18146.1|42080_43103_+	phosphoribosylaminoimidazole synthetase	NA	A0A0E3FGG1	Synechococcus_phage	41.4	1.5e-62
SQG18147.1|43270_43825_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	5.2e-25
SQG18148.1|44008_45556_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	E3SNU8	Prochlorococcus_phage	52.9	2.6e-45
SQG18149.1|45613_46738_-	bacterial SH3 domain protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
SQG18150.1|46990_48256_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQG18151.1|48413_49025_+	phosphoribosyl carboxyaminoimidazole mutase	NA	A0A2P0VNU7	Tetraselmis_virus	43.1	1.4e-18
>prophage 2
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	337525	394379	1847336	protease,tRNA,bacteriocin,transposase	Streptococcus_phage(33.33%)	59	NA	NA
SQG18565.1|337525_338116_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	55.7	2.6e-54
SQG18567.1|338610_338886_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG18569.1|339134_339770_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.0e-65
SQG18572.1|339787_340663_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.9	1.8e-72
SQG18574.1|341325_341649_+	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
SQG18577.1|341653_342517_+	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	74.7	3.8e-115
SQG18579.1|342543_342936_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG18580.1|342982_343612_-	copper homeostasis protein	NA	NA	NA	NA	NA
SQG18583.1|343911_344268_+	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.0	1.8e-39
SQG18585.1|344341_345169_-	3'-exo-deoxyribonuclease	NA	M1PSC0	Streptococcus_phage	78.9	1.7e-128
SQG18587.1|345402_346584_+	L-lactate oxidase	NA	NA	NA	NA	NA
SQG18589.1|346849_351790_+	LPXTG-motif cell wall anchor domain protein	NA	NA	NA	NA	NA
SQG18591.1|352561_353269_+	permease	NA	NA	NA	NA	NA
SQG18593.1|353511_355509_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SHR2	Klosneuvirus	35.0	1.3e-86
SQG18595.1|356002_357016_+	ribonucleotide-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	53.4	5.5e-97
SQG18598.1|357019_357508_+	nrdI protein	NA	R4JF54	Bacillus_phage	37.5	1.3e-11
SQG18600.1|357474_359655_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.3	2.8e-170
SQG18602.1|359855_360608_-	ADP-ribosyltransferase	NA	NA	NA	NA	NA
SQG18608.1|361066_361546_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG18610.1|362051_362492_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG18612.1|362680_362932_+	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQG18614.1|363027_363660_-	phage protein	NA	NA	NA	NA	NA
SQG18616.1|363736_363850_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG18618.1|364702_364939_+	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA	NA
SQG18620.1|364931_365630_+	3-ketoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.6	7.1e-11
SQG18623.1|365626_366664_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SQG18628.1|366996_368334_+	phosphoglycerate transporter protein	NA	NA	NA	NA	NA
SQG18630.1|368506_369889_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L4K9	Tupanvirus	36.0	8.5e-32
SQG18633.1|369919_370474_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
SQG18635.1|370473_370725_+	membrane protein	NA	NA	NA	NA	NA
SQG18636.1|370743_371439_+	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
SQG18637.1|371589_371931_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG18640.1|372031_372679_-	metalloregulator ScaR	NA	NA	NA	NA	NA
SQG18657.1|372824_373757_+	manganese-binding protein	NA	NA	NA	NA	NA
SQG18659.1|373820_374546_+	manganese transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.4e-17
SQG18661.1|374546_375401_+	ABC 3 transport family protein	NA	NA	NA	NA	NA
SQG18663.1|375548_376355_-	cyclophilin type peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
SQG18665.1|376571_378977_+	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
SQG18667.1|379046_379400_-	integral membrane protein	NA	NA	NA	NA	NA
SQG18669.1|379643_380069_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQG18670.1|380174_380864_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQG18672.1|381185_381914_+	uridylate kinase	NA	NA	NA	NA	NA
SQG18674.1|381942_382500_+	ribosome recycling factor	NA	NA	NA	NA	NA
SQG18676.1|382608_383466_+	s1 RNA binding domain	NA	NA	NA	NA	NA
SQG18678.1|383538_384048_+	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SQG18680.1|384044_384260_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG18682.1|384415_385597_+	lysM domain protein	NA	A0A0E3XB61	Gordonia_phage	39.6	2.1e-15
SQG18683.1|385912_387685_+	myosin-cross-reactive antigen	NA	NA	NA	NA	NA
SQG18685.1|387843_388896_+	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
SQG18687.1|388941_389517_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA	NA
SQG18689.1|389675_390173_+|protease	metalloprotease	protease	NA	NA	NA	NA
SQG18691.1|390153_390561_+	diacylglycerol kinase	NA	NA	NA	NA	NA
SQG18692.1|390680_391577_+	GTP-binding protein Era	NA	NA	NA	NA	NA
SQG18694.1|391596_392073_+	phosphohydrolase	NA	NA	NA	NA	NA
SQG18696.1|392379_392634_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG18699.1|393030_393276_+|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	bacteriocin	NA	NA	NA	NA
SQG18701.1|393290_393473_+|bacteriocin	bacteriocin class II with double-glycine leader peptide family protein	bacteriocin	NA	NA	NA	NA
SQG18704.1|393810_393960_-|transposase	IS1191 transposase	transposase	NA	NA	NA	NA
SQG18706.1|393956_394379_-|transposase	transposase, Mutator family protein	transposase	NA	NA	NA	NA
>prophage 3
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	447360	454007	1847336	portal	Streptococcus_phage(66.67%)	12	NA	NA
SQG18802.1|447360_447570_-	vanUG2	NA	A0A2K5B263	Erysipelothrix_phage	61.5	1.3e-16
SQG18804.1|447589_449218_-	ATPase	NA	NA	NA	NA	NA
SQG18806.1|449208_449433_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG18808.1|449432_450317_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG18809.1|450359_450518_+	prophage LambdaSa04	NA	M1PSF2	Streptococcus_phage	86.5	1.0e-18
SQG18812.1|450573_450876_+	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA	NA
SQG18814.1|450875_451181_+	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA	NA
SQG18815.1|451199_451472_+	cytoplasmic protein	NA	E4ZFM1	Streptococcus_phage	50.7	4.1e-07
SQG18817.1|451576_451843_+|portal	portal protein	portal	E4ZFM3	Streptococcus_phage	91.8	1.4e-39
SQG18819.1|452095_452404_+	prophage minor structural protein	NA	Q6DMT0	Streptococcus_phage	64.9	5.7e-21
SQG18822.1|452820_453159_+	huntington interacting protein HYPE	NA	NA	NA	NA	NA
SQG18824.1|453182_454007_+	asparagine ligase A	NA	M1PB22	Moumouvirus	33.1	1.1e-21
>prophage 4
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	526943	631103	1847336	capsid,bacteriocin,head,terminase,protease,transposase,integrase,tail,tRNA	Temperate_phage(43.55%)	108	522100:522117	601644:601661
522100:522117	attL	TTTAAAATAGGCATTTTA	NA	NA	NA	NA
SQG18963.1|526943_528290_+|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A2P1EMB4	Moumouvirus	30.8	1.1e-55
SQG18965.1|528702_529593_+	P-loop ATPase protein family protein	NA	A0A0R8VB27	Thermobifida_phage	29.8	8.8e-06
SQG18967.1|529589_530567_+	transporter	NA	A1IMD5	Streptococcus_phage	74.2	7.3e-139
SQG18969.1|530563_531475_+	sporulation Regulator WhiA C terminal domain-containing protein	NA	Q7AWZ3	Streptococcus_phage	64.7	1.0e-105
SQG18971.1|531607_533005_+	dipeptidase	NA	NA	NA	NA	NA
SQG18973.1|533156_534704_+	high-affinity zinc uptake system protein	NA	NA	NA	NA	NA
SQG18975.1|534850_535573_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQG18977.1|535591_536791_+	tagatose-6-phosphate ketose/aldose isomerase	NA	NA	NA	NA	NA
SQG18978.1|536887_537148_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
SQG18980.1|537262_538204_-	DHH family protein	NA	NA	NA	NA	NA
SQG18982.1|538597_539047_+	flavodoxin	NA	NA	NA	NA	NA
SQG18984.1|539221_539506_+	chorismate mutase	NA	NA	NA	NA	NA
SQG18986.1|539498_540761_+	chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	51.3	1.1e-94
SQG18988.1|540875_541223_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
SQG18990.1|541586_542663_-|integrase	prophage LambdaSa1, site-specific recombinase phage integrase family protein	integrase	Q0R5B4	Streptococcus_phage	41.2	7.5e-68
SQG18992.1|542781_543303_-	phage protein	NA	Q938N8	Temperate_phage	97.7	7.5e-66
SQG18993.1|543313_543691_-	cI-like repressor	NA	A0A1P8VVK5	Streptococcus_phage	77.6	1.6e-54
SQG19001.1|543674_544034_-	Transcriptional regulator, MerR family	NA	A0A1P8VVN3	Streptococcus_phage	95.0	1.7e-56
SQG19004.1|544221_544440_+	Transcriptional regulator, Cro family	NA	A0A1P8VVR5	Streptococcus_phage	97.2	5.9e-33
SQG19031.1|544539_544770_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19032.1|544753_544897_+	phage protein	NA	A0A1P8VVR9	Streptococcus_phage	83.7	3.4e-13
SQG19033.1|544906_545125_+	phage protein	NA	NA	NA	NA	NA
SQG19034.1|545126_545369_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19035.1|545355_546672_+	chromosome segregation ATPases	NA	A0A097BY67	Enterococcus_phage	63.8	7.8e-152
SQG19036.1|546686_547769_+	phage protein	NA	A0A0K2CZH1	Paenibacillus_phage	53.3	2.5e-103
SQG19037.1|547807_547942_+	phage protein	NA	NA	NA	NA	NA
SQG19038.1|547963_548557_+	phage protein	NA	A0A097BY29	Enterococcus_phage	43.5	1.7e-29
SQG19039.1|548556_550140_+	DNA/RNA helicase	NA	A0A097BY72	Enterococcus_phage	77.8	2.0e-234
SQG19040.1|550152_550347_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19041.1|550369_552613_+	ATPase	NA	Q5YA88	Bacillus_phage	63.7	4.7e-282
SQG19042.1|552904_553087_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19043.1|553079_553475_+	phage protein	NA	Q5YA86	Bacillus_phage	58.8	1.8e-40
SQG19044.1|553471_553696_+	phage associated protein	NA	NA	NA	NA	NA
SQG19045.1|553698_553884_+	phage protein	NA	A3F626	Streptococcus_phage	82.9	6.6e-09
SQG19046.1|553880_554132_+	phage protein	NA	NA	NA	NA	NA
SQG19047.1|554115_554520_+	phage protein	NA	A3F627	Streptococcus_phage	65.2	1.6e-39
SQG19048.1|554516_554801_+	phage membrane protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	89.4	1.4e-37
SQG19049.1|554802_555435_+	phage protein	NA	L0P368	Streptococcus_phage	68.6	2.3e-85
SQG19050.1|555437_556148_+	phage protein	NA	Q938L9	Temperate_phage	46.2	3.0e-25
SQG19052.1|556144_556516_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19053.1|556783_557221_+	phage protein	NA	A0A097PBF1	Streptococcus_pyogenes_phage	99.3	1.4e-76
SQG19055.1|558077_558596_+	Chromosome partitioning protein parB	NA	Q938L7	Temperate_phage	100.0	1.5e-90
SQG19057.1|558574_559252_+	hypothetical amino acid ABC transporter ATP-binding protein	NA	Q938L6	Temperate_phage	100.0	8.7e-131
SQG19059.1|559704_560082_+	phage transcriptional regulator	NA	Q938L5	Temperate_phage	100.0	1.7e-67
SQG19061.1|560132_560606_+	phage protein	NA	Q938L4	Temperate_phage	98.7	7.3e-76
SQG19063.1|560688_561900_+|terminase	phage terminase	terminase	Q938L3	Temperate_phage	99.7	3.7e-225
SQG19065.1|561913_563416_+|capsid	Minor capsid protein	capsid	Q938L2	Temperate_phage	100.0	5.4e-282
SQG19067.1|563420_564899_+|capsid	capsid protein	capsid	Q938L1	Temperate_phage	100.0	8.2e-275
SQG19069.1|564870_565110_+	phage protein	NA	Q938L0	Temperate_phage	100.0	2.8e-36
SQG19071.1|565171_565438_+	secreted phage protein	NA	Q938K9	Temperate_phage	100.0	1.5e-38
SQG19073.1|565569_566178_+	phage protein	NA	Q938K8	Temperate_phage	100.0	1.3e-96
SQG19076.1|566181_567000_+|head	putative major head protein	head	Q79S85	Temperate_phage	100.0	4.0e-146
SQG19078.1|567053_567470_+	phage protein	NA	Q938K7	Temperate_phage	100.0	1.1e-56
SQG19080.1|567432_567792_+|capsid	minor capsid protein - phage associated	capsid	Q79S86	Temperate_phage	100.0	1.0e-58
SQG19082.1|567791_568148_+	phage protein	NA	Q79S88	Temperate_phage	100.0	4.5e-62
SQG19085.1|568144_568543_+|capsid	minor capsid protein	capsid	Q79S87	Temperate_phage	100.0	3.5e-71
SQG19087.1|568542_569028_+|tail	major tail shaft protein	tail	Q938K6	Temperate_phage	100.0	1.6e-86
SQG19089.1|569066_569501_+	phage protein	NA	Q938K5	Temperate_phage	100.0	2.6e-72
SQG19091.1|569504_570086_+	bacteriophage Gp15 family protein	NA	Q938K4	Temperate_phage	99.5	4.9e-106
SQG19093.1|570075_573336_+	phage protein	NA	Q938K3	Temperate_phage	99.5	0.0e+00
SQG19095.1|573332_574049_+	phage protein	NA	Q938K2	Temperate_phage	100.0	2.9e-137
SQG19097.1|574045_576193_+	Phage endopeptidase	NA	Q938K1	Temperate_phage	95.9	0.0e+00
SQG19099.1|576189_577404_+	phage protein	NA	A3F657	Streptococcus_phage	49.5	5.0e-44
SQG19101.1|577405_577720_+	phage protein	NA	NA	NA	NA	NA
SQG19102.1|577730_579620_+	phage protein	NA	Q938J9	Temperate_phage	75.6	1.4e-189
SQG19104.1|579631_580060_+	phage protein	NA	Q938J8	Temperate_phage	84.3	8.1e-58
SQG19106.1|580062_580695_+	phage protein	NA	Q938J7	Temperate_phage	49.5	2.0e-44
SQG19108.1|580706_580979_+	phage membrane protein	NA	A7J2B2	Streptococcus_phage	91.0	5.5e-36
SQG19109.1|580975_581203_+	phage protein	NA	A7J2B3	Streptococcus_phage	98.7	7.6e-31
SQG19111.1|581211_581322_+	phage membrane protein	NA	A7J2B4	Streptococcus_phage	97.2	1.8e-09
SQG19114.1|581318_582527_+	phage-associated cell wall hydrolase	NA	Q938J4	Temperate_phage	87.5	2.9e-214
SQG19116.1|582636_583617_-	Sdn	NA	A7J2B8	Streptococcus_phage	99.7	1.3e-167
SQG19118.1|583855_584035_+	Paratox	NA	A3F673	Streptococcus_phage	77.6	3.4e-18
SQG19121.1|583980_584097_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19123.1|584868_585438_+	hydrolase, haloacid dehalogenase-like family	NA	NA	NA	NA	NA
SQG19126.1|585438_587391_+	DNA gyrase subunit B	NA	G3M9Z3	Bacillus_virus	46.3	8.9e-144
SQG19128.1|587747_589472_+	septation ring formation regulator	NA	NA	NA	NA	NA
SQG19131.1|589603_590062_-	hypothetical cytosolic protein	NA	W6LLD2	Streptococcus_phage	39.1	1.8e-18
SQG19133.1|590294_591602_+	Enolase	NA	A0A1X9I5Z8	Streptococcus_phage	96.6	1.2e-240
SQG19135.1|592076_592766_-|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	78.5	3.0e-94
SQG19138.1|593372_594914_-	MgaA-like transcriptional regulator	NA	NA	NA	NA	NA
SQG19140.1|595373_601313_+	putative extracellular matrix binding protein Epf	NA	NA	NA	NA	NA
SQG19142.1|602176_602338_+|bacteriocin	bacteriocin protoxin, streptolysin S family protein	bacteriocin	NA	NA	NA	NA
601644:601661	attR	TAAAATGCCTATTTTAAA	NA	NA	NA	NA
SQG19144.1|602559_603510_+	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA	NA
SQG19147.1|603506_604565_+|bacteriocin	bacteriocin biosynthesis cyclodehydratase	bacteriocin	NA	NA	NA	NA
SQG19149.1|604584_605943_+|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	bacteriocin	NA	NA	NA	NA
SQG19151.1|605917_606589_+|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQG19153.1|606585_607269_+	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA	NA
SQG19155.1|607291_608215_+	ABC transporter family protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	38.1	6.7e-33
SQG19158.1|608223_609351_+	ABC transporter	NA	NA	NA	NA	NA
SQG19160.1|609347_610466_+	ABC transporter	NA	NA	NA	NA	NA
SQG19162.1|611036_613769_+	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
SQG19164.1|614740_616699_+	NAD-dependent DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	34.9	5.8e-103
SQG19166.1|616712_617735_+	lipid kinase	NA	A0A1V0SBJ0	Catovirus	27.9	3.6e-19
SQG19169.1|618127_618325_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
SQG19171.1|618359_619076_+	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
SQG19173.1|619093_619588_+	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
SQG19175.1|619587_620124_+	ATP synthase delta chain	NA	NA	NA	NA	NA
SQG19178.1|620139_621648_+	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
SQG19180.1|621663_622539_+	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
SQG19182.1|622700_624107_+	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
SQG19185.1|624119_624536_+	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
SQG19187.1|624801_625059_+	membrane protein	NA	NA	NA	NA	NA
SQG19190.1|625123_626395_+	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQG19192.1|626398_626587_+	epuA protein	NA	NA	NA	NA	NA
SQG19195.1|626622_627162_+	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA	NA
SQG19197.1|627411_628488_+|tRNA	phenylalanyl-tRNA synthetase alpha subunit	tRNA	A0A2K9L3A8	Tupanvirus	34.3	2.8e-30
SQG19199.1|628697_631103_+|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
>prophage 5
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	666542	677145	1847336		Streptococcus_phage(57.14%)	9	NA	NA
SQG19272.1|666542_668753_-	phosphoglycerol transferase	NA	W6LM83	Streptococcus_phage	69.1	2.9e-268
SQG19274.1|668860_670024_+	SAM-dependent methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
SQG19276.1|670020_670707_+	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	5.4e-88
SQG19278.1|670800_671967_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
SQG19280.1|672027_672369_+	hypothetical cytosolic protein	NA	A0A1X9I5Y8	Streptococcus_phage	39.3	1.3e-18
SQG19282.1|672589_673942_+	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.2	1.6e-30
SQG19285.1|674029_675298_-	folylpolyglutamate synthase	NA	NA	NA	NA	NA
SQG19287.1|675327_675768_-	membrane protein	NA	NA	NA	NA	NA
SQG19290.1|676002_677145_+	aminotransferase class-V family protein	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
>prophage 6
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	704075	740421	1847336	protease,tRNA,head,transposase	Bacillus_phage(30.77%)	34	NA	NA
SQG19352.1|704075_704807_+|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
SQG19354.1|704806_705799_+	thioredoxin reductase	NA	Q9JRK7	Streptococcus_phage	54.9	8.2e-29
SQG19356.1|705976_707035_+	regulatory protein	NA	NA	NA	NA	NA
SQG19358.1|707047_707971_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
SQG19360.1|708271_708940_+	deoR-like helix-turn-helix domain-containing protein	NA	A0A077SK06	Escherichia_phage	32.7	2.2e-17
SQG19362.1|708936_709848_+	1-phosphofructokinase	NA	NA	NA	NA	NA
SQG19363.1|709844_711791_+	PTS system fructose-specific transporter subunit IIABC	NA	NA	NA	NA	NA
SQG19365.1|711889_712483_+	N-acetylmuramidase	NA	A0A249Y0X5	Enterococcus_phage	33.8	3.5e-11
SQG19367.1|712634_713342_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q332B8	Clostridium_botulinum_C_phage	36.4	1.9e-11
SQG19369.1|713398_713617_-|transposase	degenerate transposase	transposase	A0A1B1P773	Bacillus_phage	54.4	1.7e-08
SQG19371.1|714298_715324_-|protease	igG-degrading protease	protease	NA	NA	NA	NA
SQG19372.1|715823_716000_+	nucleoside diphosphate kinase	NA	NA	NA	NA	NA
SQG19374.1|716227_716608_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG19376.1|716607_717456_+	degV family protein	NA	NA	NA	NA	NA
SQG19378.1|717580_718789_+|head	poly A polymerase head domain-containing protein	head	H7BUW3	unidentified_phage	45.3	9.0e-38
SQG19380.1|718785_720663_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	32.0	3.0e-64
SQG19382.1|721554_721965_+	polypeptide deformylase family protein	NA	E3SLL2	Synechococcus_phage	30.6	6.9e-06
SQG19384.1|722046_724059_-	5'-nucleotidase	NA	NA	NA	NA	NA
SQG19386.1|724278_724929_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
SQG19388.1|724931_725600_+	two-component response regulator	NA	W8CYM9	Bacillus_phage	28.8	2.3e-19
SQG19390.1|725608_726841_+	two component system histidine kinase	NA	NA	NA	NA	NA
SQG19392.1|727134_728013_+	mevalonate kinase	NA	NA	NA	NA	NA
SQG19393.1|727994_728939_+	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
SQG19395.1|728931_729945_+	phosphomevalonate kinase	NA	NA	NA	NA	NA
SQG19397.1|729931_730921_+	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA	NA
SQG19398.1|731150_732428_-	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
SQG19399.1|732414_733590_-	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
SQG19400.1|733798_734638_+	thymidylate synthase	NA	U5J9N5	Bacillus_phage	53.2	1.7e-83
SQG19401.1|734717_735215_+	dihydrofolate reductase	NA	W5QU76	Bacillus_phage	34.4	8.6e-11
SQG19402.1|735234_735405_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG19403.1|735534_736764_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.5	7.8e-138
SQG19404.1|736773_737373_+	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
SQG19405.1|737520_738264_+	virulence factor relevant regulator	NA	NA	NA	NA	NA
SQG19406.1|738321_740421_-|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.4	3.3e-120
>prophage 7
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	780269	818480	1847336	terminase,integrase,tail	Streptococcus_phage(61.82%)	64	782994:783042	819577:819625
SQG19452.1|780269_781139_+	glucose-1-phosphate thymidyl transferase	NA	K7QKA7	Escherichia_phage	64.2	5.4e-101
SQG19454.1|781138_781732_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	28.2	3.7e-08
SQG19456.1|781975_783016_+	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.9	1.5e-68
782994:783042	attL	AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAA	NA	NA	NA	NA
SQG19458.1|783098_784238_-|integrase	phage integrase	integrase	A1EAB7	Streptococcus_phage	56.3	3.4e-119
SQG19460.1|784365_784632_-	phage protein	NA	NA	NA	NA	NA
SQG19462.1|784643_785024_-	peptidase	NA	A0A1S5SFH2	Streptococcus_phage	60.3	2.0e-39
SQG19463.1|785027_785300_-	Cro/CI family phage transcriptional regulator	NA	Q7Y4M0	Streptococcus_phage	73.9	2.2e-32
SQG19465.1|786072_786222_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19468.1|786528_786720_+	phage protein	NA	A7J270	Streptococcus_phage	92.1	4.0e-25
SQG19470.1|786731_787448_+	phage antirepressor KilAC domain-containing protein	NA	C9WB91	Streptococcus_virus	76.3	1.1e-102
SQG19472.1|787460_787592_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19474.1|787588_787771_-	phage membrane protein	NA	NA	NA	NA	NA
SQG19476.1|787877_788189_+	phage protein	NA	A1EAC3	Streptococcus_phage	85.4	2.5e-48
SQG19478.1|788190_788376_+	phage protein	NA	Q938N3	Temperate_phage	90.2	1.8e-22
SQG19479.1|788475_788745_+	phage replication protein	NA	A0A060QMU7	Streptococcus_phage	46.3	2.5e-12
SQG19481.1|788869_789259_+	DNA replication protein dnaD	NA	Q938N2	Temperate_phage	82.9	2.9e-54
SQG19483.1|789239_789473_+	phage protein	NA	Q938N1	Temperate_phage	94.8	6.1e-36
SQG19485.1|789469_789610_+	phage protein	NA	A0A1X9I6Y1	Streptococcus_phage	56.8	1.5e-05
SQG19487.1|789618_789825_+	phage protein	NA	NA	NA	NA	NA
SQG19489.1|789880_790210_+	phage protein	NA	J7KGX3	Streptococcus_phage	86.2	9.3e-46
SQG19492.1|790212_791142_+	recombinase, phage RecT family protein	NA	M1NRN6	Streptococcus_phage	71.8	1.2e-90
SQG19494.1|791138_791936_+	phage protein	NA	J7KGZ1	Streptococcus_phage	83.8	6.6e-130
SQG19496.1|791945_792113_+	phage protein	NA	A0A1S5SEF3	Streptococcus_phage	51.9	3.3e-07
SQG19498.1|792289_792631_+	phage protein	NA	NA	NA	NA	NA
SQG19500.1|792627_793140_+	phage protein	NA	Q708P9	Streptococcus_phage	73.2	1.1e-61
SQG19503.1|793126_793321_+	phage protein	NA	A3F626	Streptococcus_phage	89.2	9.7e-11
SQG19505.1|793317_793587_+	phage membrane protein	NA	A7J287	Streptococcus_phage	80.9	2.9e-29
SQG19507.1|793631_794075_+	DNA N-4 cytosine methyltransferase M.NgoMXV	NA	A0A097PAU8	Streptococcus_pyogenes_phage	82.9	3.5e-72
SQG19510.1|794076_794709_+	phage protein	NA	L0P368	Streptococcus_phage	65.7	5.9e-81
SQG19512.1|794711_794822_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG19513.1|795109_795550_+	phage protein	NA	A0A0B5A564	Streptococcus_phage	50.4	3.5e-24
SQG19515.1|796125_796482_+	phage protein	NA	M1PRL3	Streptococcus_phage	57.8	2.4e-07
SQG19517.1|796478_797747_+	structural phage protein	NA	A0A1X9I693	Streptococcus_phage	75.8	5.9e-189
SQG19519.1|797739_798465_+	phage protein	NA	M1Q184	Streptococcus_phage	65.4	8.8e-89
SQG19521.1|798533_799232_+	phage protein	NA	A0A1P8BLD7	Lactococcus_phage	41.3	1.7e-44
SQG19524.1|799237_799462_+	phage protein	NA	NA	NA	NA	NA
SQG19526.1|799511_799691_+	phage protein	NA	NA	NA	NA	NA
SQG19528.1|799683_799950_+	secreted phage protein	NA	Q938K9	Temperate_phage	95.5	6.4e-37
SQG19530.1|799951_800188_+	phage protein	NA	M1IRA5	Streptococcus_phage	80.3	1.2e-31
SQG19532.1|800269_801685_+|terminase	phage terminase	terminase	A0A0B5A091	Streptococcus_phage	74.2	2.9e-213
SQG19534.1|801765_802230_+	phage protein	NA	A0A141E167	Streptococcus_phage	57.8	6.3e-40
SQG19536.1|802233_803127_+	phage structural protein	NA	A0A126GGI3	Streptococcus_phage	77.4	6.3e-129
SQG19538.1|803128_803257_+	Uncharacterised protein	NA	A0A0B5A554	Streptococcus_phage	61.9	5.2e-05
SQG19539.1|803277_803700_+	phage Gp19/Gp15/Gp42 family protein	NA	A0A0B5A2F6	Streptococcus_phage	68.6	1.3e-47
SQG19540.1|803659_803998_+	phage protein	NA	A0A0B5A086	Streptococcus_phage	75.0	8.1e-45
SQG19541.1|803990_804227_+	phage protein	NA	A0A0B5A7G2	Streptococcus_phage	71.4	1.9e-21
SQG19543.1|804227_804563_+	phage protein	NA	A0A1P8BMR5	Lactococcus_phage	64.9	9.8e-35
SQG19544.1|804578_805169_+|tail	major tail protein	tail	M1PKG8	Streptococcus_phage	63.0	2.4e-60
SQG19546.1|805179_805443_+	phage protein	NA	A0A0B5A2F3	Streptococcus_phage	54.7	2.9e-18
SQG19548.1|805457_805829_+	phage protein	NA	M1PL84	Streptococcus_phage	59.2	9.2e-34
SQG19561.1|805828_806428_+	phage protein	NA	Q38126	Lactococcus_phage	64.3	3.6e-56
SQG19567.1|806528_807089_+	endonuclease	NA	A0A1B1IM39	Lactococcus_phage	84.4	1.0e-84
SQG19569.1|807296_809105_+|tail	minor tail protein GP26	tail	M1NRG5	Streptococcus_phage	48.3	3.4e-81
SQG19571.1|809101_809797_+	phage protein	NA	A0A1B1P761	Bacillus_phage	29.6	7.6e-05
SQG19573.1|809793_811752_+	phage endopeptidase	NA	M1PKG3	Streptococcus_phage	49.2	5.3e-96
SQG19575.1|811751_812861_+	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	66.1	3.5e-113
SQG19577.1|812875_814657_+	gp58-like family protein	NA	Q938J9	Temperate_phage	40.5	6.1e-67
SQG19580.1|814665_815094_+	phage protein	NA	Q938J8	Temperate_phage	81.4	1.1e-54
SQG19582.1|815096_815729_+	phage protein	NA	Q938J7	Temperate_phage	52.9	1.5e-47
SQG19584.1|815739_816036_+	phage protein	NA	Q938J6	Temperate_phage	98.0	3.7e-46
SQG19586.1|816032_816218_+	phage protein	NA	Q938J5	Temperate_phage	95.1	1.9e-24
SQG19591.1|816221_816332_+	phage membrane protein	NA	A7J2B4	Streptococcus_phage	97.2	1.8e-09
SQG19593.1|816328_817534_+	phage-associated cell wall hydrolase	NA	Q938J4	Temperate_phage	85.5	3.7e-209
SQG19595.1|817700_818480_+	exotoxin I precursor	NA	A0A075M4C7	Staphylococcus_phage	32.7	9.3e-28
819577:819625	attR	AAACTCAAGAAGTGATTAAATAAAACATTAAAGAACCTTGTCATATCAA	NA	NA	NA	NA
>prophage 8
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	1092509	1134851	1847336	transposase,integrase,tRNA	Enterococcus_phage(25.0%)	39	1114344:1114359	1140315:1140330
SQG20320.1|1092509_1093025_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG20323.1|1093045_1093852_+|transposase	transposase, IS861	transposase	A0A1B1P773	Bacillus_phage	50.4	8.3e-64
SQG20325.1|1093900_1094632_-	16S pseudouridylate synthase	NA	NA	NA	NA	NA
SQG20328.1|1094746_1095112_+	thioesterase superfamily protein	NA	NA	NA	NA	NA
SQG20331.1|1095231_1096452_-	sugar (and other) transporter family protein	NA	NA	NA	NA	NA
SQG20413.1|1096825_1098310_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG20415.1|1098414_1098816_-	phenylacetic acid degradation protein PaaI	NA	NA	NA	NA	NA
SQG20417.1|1098900_1099413_-	phosphorylase superfamily protein	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	96.5	1.1e-90
SQG20419.1|1099702_1101058_-|tRNA	tRNA (uracil-5-)-methyltransferase	tRNA	D0R096	Streptococcus_phage	98.4	4.7e-253
SQG20421.1|1101139_1102591_-	cell envelope-related function transcriptional attenuator common domain-containing protein	NA	NA	NA	NA	NA
SQG20422.1|1102798_1103290_-	shikimate kinase	NA	NA	NA	NA	NA
SQG20425.1|1103282_1104566_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQG20427.1|1104676_1105642_-	ribonuclease BN-like family protein	NA	NA	NA	NA	NA
SQG20429.1|1105643_1106504_-	methionine aminopeptidase Map	NA	NA	NA	NA	NA
SQG20431.1|1106519_1107803_-	cytosolic protein containing multiple CBS domains	NA	NA	NA	NA	NA
SQG20433.1|1107811_1108354_-	acetyltransferase family protein	NA	NA	NA	NA	NA
SQG20435.1|1108591_1109245_-	immunoglobulin G-binding protein G	NA	NA	NA	NA	NA
SQG20437.1|1109602_1110862_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQG20439.1|1111035_1112232_-	S-adenosylmethionine synthetase	NA	A0A2H4PQS6	Staphylococcus_phage	65.2	1.3e-137
SQG20441.1|1112767_1115146_-	leucine Rich Repeat family protein	NA	NA	NA	NA	NA
1114344:1114359	attL	TTTTCTGCTTTTTTAG	NA	NA	NA	NA
SQG20443.1|1115349_1116291_+	biotin-protein ligase	NA	NA	NA	NA	NA
SQG20445.1|1116563_1118234_-	DNA polymerase III subunits gamma and tau	NA	E7DN81	Pneumococcus_phage	40.6	3.9e-47
SQG20447.1|1118233_1118731_-	GAF domain-containing protein	NA	NA	NA	NA	NA
SQG20449.1|1118875_1119685_+	membrane protein	NA	NA	NA	NA	NA
SQG20451.1|1119737_1120001_-	membrane protein	NA	NA	NA	NA	NA
SQG20453.1|1120080_1120707_-	uridine kinase	NA	A0A1V0SAA3	Catovirus	39.7	2.2e-35
SQG20455.1|1120804_1121890_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.3	1.6e-33
SQG20458.1|1122000_1123275_-	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
SQG20460.1|1123369_1124797_-	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQG20462.1|1124981_1126715_-	Phosphoenolpyruvate-protein phosphotransferase of PTS system	NA	NA	NA	NA	NA
SQG20465.1|1126719_1126983_-	Phosphotransferase system, phosphocarrier protein HPr	NA	NA	NA	NA	NA
SQG20468.1|1127375_1127594_+	glutaredoxin	NA	A0A249XUR7	Enterococcus_phage	49.3	1.1e-13
SQG20469.1|1127613_1129773_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	63.6	4.7e-263
SQG20471.1|1129976_1130936_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A096XT60	Enterococcus_phage	70.2	1.8e-126
SQG20474.1|1130910_1132224_+	chloride channel protein	NA	NA	NA	NA	NA
SQG20475.1|1132361_1132655_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG20477.1|1132687_1133143_+|transposase	transposase	transposase	U5P429	Shigella_phage	34.0	9.0e-15
SQG20480.1|1133146_1133518_+|integrase	integrase core domain protein	integrase	A0A0P0I4A4	Acinetobacter_phage	40.7	1.5e-20
SQG20482.1|1133717_1134851_+|transposase	transposase	transposase	NA	NA	NA	NA
1140315:1140330	attR	TTTTCTGCTTTTTTAG	NA	NA	NA	NA
>prophage 9
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	1373584	1423253	1847336	terminase,portal,integrase,tail,tRNA	Streptococcus_phage(80.0%)	64	1379048:1379064	1419849:1419865
SQG20969.1|1373584_1376446_-	translation initiation factor IF-2	NA	E3T4N3	Cafeteria_roenbergensis_virus	25.4	1.2e-19
SQG20971.1|1376465_1376768_-	ribosomal protein in infB 5'region	NA	NA	NA	NA	NA
SQG20973.1|1376760_1377057_-	putative cytoplasmic protein	NA	NA	NA	NA	NA
SQG20974.1|1377072_1378218_-	transcription elongation factor	NA	NA	NA	NA	NA
SQG20977.1|1378404_1378941_-	ribosome maturation factor rimP	NA	NA	NA	NA	NA
1379048:1379064	attL	AAGGAGAGGAGGGGATT	NA	NA	NA	NA
SQG20979.1|1379185_1379365_-	paratox	NA	A3F673	Streptococcus_phage	83.1	5.6e-21
SQG20981.1|1379603_1380776_+	DNA/RNA non-specific endonuclease family protein	NA	A7J2B8	Streptococcus_phage	49.8	4.7e-76
SQG20984.1|1380891_1382088_-	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	Q938J4	Temperate_phage	82.2	6.1e-196
SQG20986.1|1382084_1382195_-	phage membrane protein	NA	A7J2B4	Streptococcus_phage	88.9	8.7e-09
SQG20988.1|1382198_1382384_-	phage protein	NA	Q938J5	Temperate_phage	91.8	6.2e-23
SQG20990.1|1382380_1382680_-	phage protein	NA	Q938J6	Temperate_phage	82.3	3.5e-36
SQG20992.1|1382690_1383311_-	phage protein	NA	A3F662	Streptococcus_phage	88.8	8.3e-80
SQG20995.1|1383313_1383475_-	phage protein	NA	NA	NA	NA	NA
SQG20997.1|1383483_1385391_-	gp58-like family protein	NA	Q938J9	Temperate_phage	61.7	3.8e-139
SQG20999.1|1385401_1386037_-	phage protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	67.6	2.2e-75
SQG21000.1|1386036_1387092_-	hyaluronoglucosaminidase	NA	A3F657	Streptococcus_phage	73.2	1.2e-126
SQG21002.1|1387088_1389071_-	phage protein	NA	A7J2A7	Streptococcus_phage	92.5	0.0e+00
SQG21004.1|1389080_1389923_-	phage protein	NA	A7J2A6	Streptococcus_phage	99.6	8.5e-160
SQG21007.1|1389934_1394317_-|tail	phage minor tail protein	tail	A7J2A5	Streptococcus_phage	76.4	3.2e-226
SQG21009.1|1394331_1394565_-	phage protein	NA	A7J2A4	Streptococcus_phage	100.0	4.4e-34
SQG21011.1|1394639_1395095_-	phage protein	NA	A7J2A3	Streptococcus_phage	100.0	8.3e-77
SQG21013.1|1395148_1395748_-|tail	phage major tail protein	tail	A7J2A2	Streptococcus_phage	98.9	4.1e-92
SQG21016.1|1395759_1396119_-	phage protein	NA	A7J2A1	Streptococcus_phage	97.5	6.8e-58
SQG21018.1|1396122_1396467_-	phage protein	NA	A7J2A0	Streptococcus_phage	99.1	6.1e-56
SQG21020.1|1396463_1396742_-	phage protein	NA	A7J299	Streptococcus_phage	98.9	4.2e-47
SQG21022.1|1396752_1397109_-	phage protein	NA	A7J298	Streptococcus_phage	97.5	2.8e-56
SQG21024.1|1397120_1398008_-	phage protein	NA	A7J297	Streptococcus_phage	99.7	3.6e-161
SQG21026.1|1398020_1398590_-	phage protein	NA	A7J296	Streptococcus_phage	97.9	2.6e-80
SQG21028.1|1398745_1399012_-	phage protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	88.6	1.7e-34
SQG21030.1|1399014_1399131_-	phage membrane protein	NA	A7J294	Streptococcus_phage	97.4	3.0e-07
SQG21032.1|1399233_1400679_-	phage protein	NA	A7J293	Streptococcus_phage	92.9	3.4e-257
SQG21037.1|1400638_1402171_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	98.2	1.3e-286
SQG21043.1|1402186_1403464_-|terminase	terminase large subunit	terminase	A7J291	Streptococcus_phage	97.6	1.3e-241
SQG21044.1|1403453_1403906_-|terminase	phage terminase small subunit	terminase	A7J290	Streptococcus_phage	100.0	6.9e-76
SQG21045.1|1403995_1404412_-	phage protein	NA	A7J289	Streptococcus_phage	100.0	6.6e-73
SQG21046.1|1404408_1404600_-	phage protein	NA	NA	NA	NA	NA
SQG21047.1|1404589_1405378_-	DNA methylase family protein	NA	A0A1W6JJW1	Lactococcus_phage	73.9	2.9e-93
SQG21048.1|1405449_1405716_-	phage protein	NA	A7J287	Streptococcus_phage	65.2	5.4e-20
SQG21049.1|1405712_1405880_-	phage protein	NA	A7J285	Streptococcus_phage	94.5	1.9e-23
SQG21050.1|1405880_1407203_-	SNF2 family phage protein	NA	A7J284	Streptococcus_phage	98.4	1.9e-254
SQG21051.1|1407199_1407475_-	phage protein	NA	A7J283	Streptococcus_phage	100.0	9.1e-47
SQG21052.1|1407861_1410246_-	phage DNA primase/helicase protein	NA	A7J282	Streptococcus_phage	94.4	4.1e-276
SQG21053.1|1410250_1412173_-	phage DNA polymerase	NA	A7J280	Streptococcus_phage	96.7	0.0e+00
SQG21054.1|1412215_1412773_-	phage protein	NA	D2J040	Enterococcus_phage	57.9	2.5e-51
SQG21055.1|1412783_1413182_-	phage protein	NA	NA	NA	NA	NA
SQG21056.1|1413185_1414340_-	phage protein	NA	A7J278	Streptococcus_phage	91.9	4.5e-204
SQG21057.1|1414339_1414639_-	phage protein	NA	A7J277	Streptococcus_phage	100.0	1.8e-43
SQG21058.1|1414726_1414930_-	phage protein	NA	A7J276	Streptococcus_phage	95.5	2.3e-31
SQG21059.1|1414939_1415080_-	phage protein	NA	NA	NA	NA	NA
SQG21060.1|1415076_1415463_-	phage protein	NA	A7J274	Streptococcus_phage	88.2	3.1e-56
SQG21061.1|1415459_1415663_-	phage protein	NA	NA	NA	NA	NA
SQG21062.1|1415655_1415826_-	phage protein	NA	A7J273	Streptococcus_phage	89.3	6.9e-21
SQG21063.1|1415822_1416098_-	phage protein	NA	A7J272	Streptococcus_phage	95.6	5.9e-46
SQG21064.1|1416159_1416375_-	phage protein	NA	M1Q1B4	Streptococcus_phage	76.8	4.2e-23
SQG21065.1|1416422_1416836_+	phage protein	NA	NA	NA	NA	NA
SQG21066.1|1416816_1416972_-	phage protein	NA	NA	NA	NA	NA
SQG21067.1|1417297_1417648_+	Cro/CI family phage transcriptional regulator	NA	A7J269	Streptococcus_phage	73.5	5.6e-41
SQG21068.1|1417661_1418045_+	phage protein	NA	A7J268	Streptococcus_phage	99.2	5.3e-69
SQG21069.1|1418055_1418607_+	phage protein	NA	A7J267	Streptococcus_phage	92.3	3.4e-85
SQG21070.1|1418723_1419803_+|integrase	integrase	integrase	A7J266	Streptococcus_phage	86.9	1.3e-176
SQG21071.1|1420000_1420636_-|tRNA	tRNA (guanine-N(7)-)-methyltransferase	tRNA	NA	NA	NA	NA
1419849:1419865	attR	AAGGAGAGGAGGGGATT	NA	NA	NA	NA
SQG21072.1|1420635_1421427_-	phosphotransferase	NA	NA	NA	NA	NA
SQG21073.1|1421490_1422525_-	bacterial ABC transporter EcsB family protein	NA	NA	NA	NA	NA
SQG21074.1|1422527_1423253_-	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	28.0	3.9e-20
>prophage 10
LS483382	Streptococcus pyogenes strain NCTC13738 genome assembly, chromosome: 1	1847336	1766813	1788356	1847336	tRNA	Streptococcus_phage(64.71%)	26	NA	NA
SQG21694.1|1766813_1768034_-	transporter	NA	A0A2H4PQR6	Staphylococcus_phage	23.6	4.6e-05
SQG21696.1|1768044_1770027_-	DNA mismatch repair protein	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	2.3e-62
SQG21698.1|1770121_1771267_-	DNA integration/recombination/inversion protein	NA	A0A1X9I5Y5	Streptococcus_phage	44.9	2.7e-84
SQG21700.1|1772540_1773050_-	transcriptional regulator	NA	W6LMS6	Streptococcus_phage	41.7	2.2e-17
SQG21702.1|1773261_1773450_+	phage protein	NA	A0A1X9I5U7	Streptococcus_phage	45.2	4.8e-07
SQG21704.1|1773465_1774074_+	Phage antirepressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	48.0	2.7e-43
SQG21706.1|1774094_1774502_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	68.7	3.8e-49
SQG21708.1|1774514_1774847_+	phage protein	NA	NA	NA	NA	NA
SQG21709.1|1775102_1775444_+	phage protein	NA	NA	NA	NA	NA
SQG21711.1|1775430_1775652_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG21713.1|1775654_1775846_+	phage protein	NA	NA	NA	NA	NA
SQG21715.1|1775857_1776187_+	phage protein	NA	NA	NA	NA	NA
SQG21718.1|1776189_1776462_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
SQG21720.1|1776462_1777320_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	74.8	3.4e-124
SQG21722.1|1777288_1778977_+	phage/plasmid primase, P4 family, C-terminal domain protein	NA	A0A1X9I717	Streptococcus_phage	82.1	5.5e-259
SQG21724.1|1779263_1779437_+	Uncharacterised protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	6.6e-11
SQG21726.1|1779442_1779616_+	phage protein	NA	NA	NA	NA	NA
SQG21729.1|1779617_1780127_+	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	60.4	3.0e-27
SQG21731.1|1780201_1780690_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	3.1e-45
SQG21733.1|1781092_1781455_+	phage protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	8.7e-05
SQG21735.1|1781429_1781813_+	phage protein	NA	J7KDQ1	Streptococcus_phage	41.7	1.7e-14
SQG21738.1|1782017_1782650_+	phage protein	NA	NA	NA	NA	NA
SQG21740.1|1783045_1785601_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	23.7	2.6e-42
SQG21741.1|1785587_1785794_-	cytoplasmic protein	NA	NA	NA	NA	NA
SQG21744.1|1785936_1786374_-	arginine repressor	NA	NA	NA	NA	NA
SQG21746.1|1786664_1788356_+|tRNA	arginyl-tRNA synthetase	tRNA	A0A2I2L3K1	Orpheovirus	32.4	6.4e-74
