assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475445.1_42727_F01	LS483383	Streptococcus cristatus strain NCTC12479 genome assembly, chromosome: 1	1	381054-382807	1	CRT	no		cas3,WYL,DinG,csm6,DEDDh,csa3	Orphan	AGNCANAGNGNNTCAGNNTCANTNAG	26	22	122	381074-381101|381074-381101|381074-381101|381074-381101|381074-381101|381074-381101|381074-381101|381074-381101|381074-381101|381074-381101|381122-381149|381122-381149|381122-381149|381122-381149|381122-381149|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381170-381197|381218-381275|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381296-381323|381344-381371|381344-381371|381392-381419|381392-381419|381392-381419|381392-381419|381392-381419|381392-381419|381392-381419|381392-381419|381440-381467|381440-381467|381440-381467|381440-381467|381440-381467|381440-381467|381440-381467|381440-381467|381488-381515|381536-381563|381536-381563|381536-381563|381536-381563|381536-381563|381536-381563|381536-381563|381536-381563|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381584-381611|381632-381659|381632-381659|381632-381659|381944-381971|381944-381971|381944-381971|381944-381971|381992-382019|381992-382019|381992-382019|381992-382019|381992-382019|382088-382115|382088-382115|382088-382115|382088-382115|382088-382115|382088-382115|382136-382163|382376-382403|382376-382403|382376-382403|382376-382403|382424-382451|382424-382451|382472-382499|382472-382499|382472-382499|382472-382499|382472-382499|382568-382595|382568-382595|382568-382595|382568-382595|382616-382643|382616-382643|382616-382643|382760-382787|382760-382787	LS483383.1_380642-380669|LS483383.1_380930-380957|LS483383.1_375308-375335|LS483383.1_375548-375575|LS483383.1_376028-376055|LS483383.1_376124-376151|LS483383.1_378158-378185|LS483383.1_378866-378893|LS483383.1_379664-379691|LS483383.1_379940-379967|LS483383.1_375500-375527|LS483383.1_380210-380237|LS483383.1_380978-381005|LS483383.1_377180-377207|LS483383.1_377918-377945|LS483383.1_379988-380015|LS483383.1_380594-380621|LS483383.1_380882-380909|LS483383.1_381026-381053|LS483383.1_377180-377207|LS483383.1_377918-377945|LS483383.1_379298-379325|LS483383.1_380258-380285|LS483383.1_374732-374759|LS483383.1_376268-376295|LS483383.1_377366-377393|LS483383.1_378728-378755|LS483383.1_379010-379037|LS483383.1_380690-380747|LS483383.1_377162-377189|LS483383.1_377348-377375|LS483383.1_377900-377927|LS483383.1_378518-378545|LS483383.1_378710-378737|LS483383.1_379472-379499|LS483383.1_379694-379721|LS483383.1_379970-379997|LS483383.1_376682-376709|LS483383.1_377444-377471|LS483383.1_380240-380267|LS483383.1_375146-375173|LS483383.1_379232-379259|LS483383.1_377540-377567|LS483383.1_380480-380507|LS483383.1_380720-380747|LS483383.1_375386-375413|LS483383.1_375818-375845|LS483383.1_375962-375989|LS483383.1_376058-376085|LS483383.1_376778-376805|LS483383.1_378422-378449|LS483383.1_375242-375269|LS483383.1_377852-377879|LS483383.1_375818-375845|LS483383.1_376202-376229|LS483383.1_376778-376805|LS483383.1_379184-379211|LS483383.1_380114-380141|LS483383.1_375722-375749|LS483383.1_378422-378449|LS483383.1_375242-375269|LS483383.1_377852-377879|LS483383.1_375818-375845|LS483383.1_376202-376229|LS483383.1_376778-376805|LS483383.1_379184-379211|LS483383.1_380114-380141|LS483383.1_374954-374981|LS483383.1_375290-375317|LS483383.1_375530-375557|LS483383.1_376010-376037|LS483383.1_376106-376133|LS483383.1_377114-377141|LS483383.1_377252-377279|LS483383.1_378140-378167|LS483383.1_378614-378641|LS483383.1_378848-378875|LS483383.1_379088-379115|LS483383.1_379328-379355|LS483383.1_375626-375653|LS483383.1_376346-376373|LS483383.1_378800-378827|LS483383.1_382832-382859|LS483383.1_377588-377615|LS483383.1_377996-378023|LS483383.1_378566-378593|LS483383.1_375794-375821|LS483383.1_376754-376781|LS483383.1_377516-377543|LS483383.1_380090-380117|LS483383.1_374738-374765|LS483383.1_379994-380021|LS483383.1_380600-380627|LS483383.1_380888-380915|LS483383.1_381032-381059|LS483383.1_378824-378851|LS483383.1_380138-380165|LS483383.1_376226-376253|LS483383.1_375650-375677|LS483383.1_376370-376397|LS483383.1_379208-379235|LS483383.1_374546-374573|LS483383.1_375794-375821|LS483383.1_376754-376781|LS483383.1_377516-377543|LS483383.1_380090-380117|LS483383.1_380216-380243|LS483383.1_380984-381011|LS483383.1_375458-375485|LS483383.1_376610-376637|LS483383.1_377042-377069|LS483383.1_377468-377495|LS483383.1_376706-376733|LS483383.1_376178-376205|LS483383.1_380090-380117|LS483383.1_376754-376781|LS483383.1_380312-380339|LS483383.1_378398-378425|LS483383.1_375122-375149|LS483383.1_376034-376061|LS483383.1_376658-376685|LS483383.1_377420-377447	NA	35	35	Orphan	cas3,WYL,DinG,csm6,DEDDh,csa3	NA|367aa|up_5|LS483383.1_374445_375546_-,NA|183aa|up_4|LS483383.1_375511_376060_-,NA|429aa|up_3|LS483383.1_376423_377710_-,NA|55aa|up_2|LS483383.1_377881_378046_-,NA|111aa|up_1|LS483383.1_378403_378736_-,NA|261aa|up_0|LS483383.1_379213_379996_-,NA|501aa|down_0|LS483383.1_382813_384316_-,NA|63aa|down_3|LS483383.1_388677_388866_+,NA|140aa|down_5|LS483383.1_389769_390189_-,NA|252aa|down_6|LS483383.1_390234_390990_+,NA|181aa|down_7|LS483383.1_391082_391625_-,NA|256aa|down_8|LS483383.1_391920_392688_+	NA|176aa|up_9|LS483383.1_366651_367179_+	PRK13660, PRK13660, hypothetical protein; Provisional	NA|115aa|up_8|LS483383.1_367250_367595_+	PRK14127, PRK14127, cell division regulator GpsB	NA|385aa|up_7|LS483383.1_368175_369330_+	COG0116, COG0116, Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair]	NA|488aa|up_6|LS483383.1_369342_370806_+	pfam18708, MapZ_C2, MapZ extracellular C-terminal domain 2	NA|367aa|up_5|LS483383.1_374445_375546_-	NA	NA|183aa|up_4|LS483383.1_375511_376060_-	NA	NA|429aa|up_3|LS483383.1_376423_377710_-	NA	NA|55aa|up_2|LS483383.1_377881_378046_-	NA	NA|111aa|up_1|LS483383.1_378403_378736_-	NA	NA|261aa|up_0|LS483383.1_379213_379996_-	NA	NA|501aa|down_0|LS483383.1_382813_384316_-	NA	NA|544aa|down_1|LS483383.1_385364_386996_+	COG1283, NptA, Na+/phosphate symporter [Inorganic ion transport and metabolism]	NA|389aa|down_2|LS483383.1_387294_388461_+	COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]	NA|63aa|down_3|LS483383.1_388677_388866_+	NA	NA|282aa|down_4|LS483383.1_388877_389723_+	cd19071, AKR_AKR1-5-like, AKR1/2/3/4/5 family of aldo-keto reductase (AKR) and similar proteins	NA|140aa|down_5|LS483383.1_389769_390189_-	NA	NA|252aa|down_6|LS483383.1_390234_390990_+	NA	NA|181aa|down_7|LS483383.1_391082_391625_-	NA	NA|256aa|down_8|LS483383.1_391920_392688_+	NA	NA|379aa|down_9|LS483383.1_392939_394076_-	TIGR02708, lactate_oxidase, L-lactate oxidase
GCA_900475445.1_42727_F01	LS483383	Streptococcus cristatus strain NCTC12479 genome assembly, chromosome: 1	2	710975-711134	1,1	PILER-CR,CRISPRCasFinder	no		cas3,WYL,DinG,csm6,DEDDh,csa3	Orphan	GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC,GCTGTGTTGTTTCGAATGGTTCCAAAAC	36,28	0	0	NA	NA	II-A,II-B:II-A,II-B	2,2	2	Orphan	cas3,WYL,DinG,csm6,DEDDh,csa3	NA|52aa|up_8|LS483383.1_705455_705611_+,NA	NA|437aa|up_9|LS483383.1_704133_705444_+	PRK12297, obgE, GTPase CgtA; Reviewed	NA|52aa|up_8|LS483383.1_705455_705611_+	NA	NA|81aa|up_7|LS483383.1_705767_706010_-	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|312aa|up_6|LS483383.1_706114_707050_-	COG0618, COG0618, Exopolyphosphatase-related proteins [General function prediction only]	NA|147aa|up_5|LS483383.1_707155_707596_+	PRK07308, PRK07308, flavodoxin; Validated	NA|461aa|up_4|LS483383.1_707719_709102_+	TIGR01980, UPF0051_protein_slr0074, FeS assembly protein SufB	NA|89aa|up_3|LS483383.1_709255_709522_+	PRK07248, PRK07248, chorismate mutase	NA|125aa|up_2|LS483383.1_709518_709893_+	PRK14221, PRK14221, fluoride efflux transporter CrcB	NA|109aa|up_1|LS483383.1_709889_710216_+	PRK14229, PRK14229, fluoride efflux transporter CrcB	NA|116aa|up_0|LS483383.1_710333_710681_+	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|214aa|down_0|LS483383.1_711300_711942_+	COG0765, HisM, ABC-type amino acid transport system, permease component [Amino acid transport and metabolism]	NA|210aa|down_1|LS483383.1_711950_712580_+	COG1126, GlnQ, ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]	NA|283aa|down_2|LS483383.1_712591_713440_+	cd00996, PBP2_AatB_like, Polar amino acids-binding domain of ATP-binding cassette transporter-like systems that belong to the type 2 periplasmic binding fold protein superfamily	NA|397aa|down_3|LS483383.1_713447_714638_-	COG0053, MMT1, Predicted Co/Zn/Cd cation transporters [Inorganic ion transport and metabolism]	NA|763aa|down_4|LS483383.1_714785_717074_+	TIGR01073, ATP-dependent_DNA_helicase_PcrA, ATP-dependent DNA helicase PcrA	NA|133aa|down_5|LS483383.1_717070_717469_+	cd04664, Nudix_Hydrolase_7, Members of the Nudix hydrolase superfamily catalyze the hydrolysis of NUcleoside DIphosphates linked to other moieties, X	NA|427aa|down_6|LS483383.1_717567_718848_+	COG2873, MET17, O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]	NA|340aa|down_7|LS483383.1_718971_719991_+	cd05247, UDP_G4E_1_SDR_e, UDP-glucose 4 epimerase, subgroup 1, extended (e) SDRs	NA|232aa|down_8|LS483383.1_720248_720944_+	cd04179, DPM_DPG-synthase_like, DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily	NA|114aa|down_9|LS483383.1_720948_721290_+	pfam10066, DUF2304, Uncharacterized conserved protein (DUF2304)
GCA_900475445.1_42727_F01	LS483383	Streptococcus cristatus strain NCTC12479 genome assembly, chromosome: 1	3	1147114-1147193	2	CRISPRCasFinder	no		cas3,WYL,DinG,csm6,DEDDh,csa3	Orphan	TTCTGGTGTCTGCCACCGCTTGGCCC	26	0	0	NA	NA	NA	1	1	Orphan	cas3,WYL,DinG,csm6,DEDDh,csa3	NA,NA|285aa|down_3|LS483383.1_1152836_1153691_-,NA|81aa|down_4|LS483383.1_1153707_1153950_-,NA|163aa|down_6|LS483383.1_1155847_1156336_-,NA|100aa|down_7|LS483383.1_1156325_1156625_-,NA|78aa|down_9|LS483383.1_1157548_1157782_-	NA|816aa|up_9|LS483383.1_1134216_1136664_+	pfam12846, AAA_10, AAA-like domain	NA|704aa|up_8|LS483383.1_1136732_1138844_+	COG4372, COG4372, Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	NA|334aa|up_7|LS483383.1_1138840_1139842_+	pfam13702, Lysozyme_like, Lysozyme-like	NA|306aa|up_6|LS483383.1_1139856_1140774_+	pfam12642, TpcC, Conjugative transposon protein TcpC	NA|640aa|up_5|LS483383.1_1141150_1143070_+	cd04168, TetM_like, Tet(M)-like family includes Tet(M), Tet(O), Tet(W), and OtrA, containing tetracycline resistant proteins	NA|118aa|up_4|LS483383.1_1143415_1143769_-	pfam18430, DBD_HTH, Putative DNA-binding domain	NA|141aa|up_3|LS483383.1_1144273_1144696_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|77aa|up_2|LS483383.1_1144692_1144923_+	pfam12645, HTH_16, Helix-turn-helix domain	NA|68aa|up_1|LS483383.1_1145383_1145587_+	pfam09035, Tn916-Xis, Excisionase from transposon Tn916	NA|406aa|up_0|LS483383.1_1145668_1146886_+	pfam00589, Phage_integrase, Phage integrase family	NA|938aa|down_0|LS483383.1_1147290_1150104_-	pfam18013, Phage_lysozyme2, Phage tail lysozyme	NA|786aa|down_1|LS483383.1_1150115_1152473_-	TIGR02746, hypothetical_protein, type-IV secretion system protein TraC	NA|120aa|down_2|LS483383.1_1152423_1152783_-	pfam12666, PrgI, PrgI family protein	NA|285aa|down_3|LS483383.1_1152836_1153691_-	NA	NA|81aa|down_4|LS483383.1_1153707_1153950_-	NA	NA|626aa|down_5|LS483383.1_1153970_1155848_-	COG3505, VirD4, Type IV secretory pathway, VirD4 components [Intracellular trafficking and secretion]	NA|163aa|down_6|LS483383.1_1155847_1156336_-	NA	NA|100aa|down_7|LS483383.1_1156325_1156625_-	NA	NA|196aa|down_8|LS483383.1_1156958_1157546_-	pfam02517, Abi, CAAX protease self-immunity	NA|78aa|down_9|LS483383.1_1157548_1157782_-	NA
