The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	36590	48952	1764453		Synechococcus_phage(28.57%)	8	NA	NA
SQG14630.1|36590_40364_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	7.9e-40
SQG14631.1|40524_41979_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.9	1.7e-54
SQG14632.1|42006_43029_+	phosphoribosylaminoimidazole synthetase	NA	A0A0E3FGG1	Synechococcus_phage	41.4	9.0e-63
SQG14633.1|43196_43751_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.1	2.4e-25
SQG14634.1|43934_45482_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
SQG14635.1|45540_46665_-	bacterial SH3 domain protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
SQG14636.1|46827_48183_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQG14637.1|48460_48952_+	phosphoribosyl carboxyaminoimidazole mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	88110	105566	1764453	integrase,tRNA	Streptococcus_phage(56.25%)	27	87538:87552	95332:95346
87538:87552	attL	AAACTATAATAGTTT	NA	NA	NA	NA
SQG14683.1|88110_88830_+	ABC transporter	NA	G3M9Y6	Bacillus_virus	26.8	1.3e-15
SQG14684.1|88822_89638_+	zinc ABC transporter permease	NA	NA	NA	NA	NA
SQG14685.1|89677_90061_-	HIT domain-containing protein	NA	NA	NA	NA	NA
SQG14686.1|90224_91376_-|integrase	Phage integrase: site-specific recombinase	integrase	A0A1X9I5Y5	Streptococcus_phage	50.0	5.1e-99
SQG14687.1|92696_93464_-	repressor protein	NA	Q76TK4	Streptococcus_pyogenes_phage	85.5	5.0e-74
SQG14688.1|93617_93824_+	Cro/CI family phage transcriptional regulator	NA	X2KUC2	Streptococcus_phage	45.5	2.0e-06
SQG14689.1|93857_94058_+	phage transcriptional repressor	NA	A0A1S5SE31	Streptococcus_phage	56.7	3.4e-11
SQG14690.1|94078_94486_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
SQG14691.1|94498_95128_+	phage protein	NA	R9QNB1	Lactococcus_phage	43.0	9.5e-31
SQG14692.1|95375_95549_+	phage protein	NA	NA	NA	NA	NA
95332:95346	attR	AAACTATAATAGTTT	NA	NA	NA	NA
SQG14693.1|95686_96139_+	phage protein	NA	NA	NA	NA	NA
SQG14694.1|96240_96582_+	phage protein	NA	NA	NA	NA	NA
SQG14695.1|96568_96790_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG14696.1|96792_96984_+	phage protein	NA	NA	NA	NA	NA
SQG14697.1|96995_97325_+	phage protein	NA	NA	NA	NA	NA
SQG14698.1|97327_97600_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
SQG14699.1|97600_98467_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	73.1	4.0e-120
SQG14700.1|98478_99873_+	Predicted P-loop ATPase and inactivated derivatives	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
SQG14701.1|100166_100421_+	phage protein	NA	NA	NA	NA	NA
SQG14702.1|100417_100591_+	Uncharacterised protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
SQG14703.1|100596_100770_+	phage protein	NA	NA	NA	NA	NA
SQG14704.1|100771_101281_+	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.9e-29
SQG14705.1|101354_101843_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	53.7	1.2e-44
SQG14706.1|102246_102609_+	phage protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	30.8	3.5e-06
SQG14707.1|102583_102967_+	phage protein	NA	Q938L8	Temperate_phage	42.1	3.7e-14
SQG14708.1|103174_103807_+	phage protein	NA	NA	NA	NA	NA
SQG14709.1|104306_105566_-|tRNA	tyrosyl-tRNA synthetase	tRNA	K4F5T3	Cronobacter_phage	40.0	2.6e-72
>prophage 3
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	339166	345201	1764453		Streptococcus_phage(100.0%)	9	NA	NA
SQG14920.1|339166_339802_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.9	9.2e-66
SQG14921.1|339819_340695_+	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	47.6	1.7e-70
SQG14922.1|340713_340953_+	Tpl protein	NA	NA	NA	NA	NA
SQG14923.1|341357_341681_+	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
SQG14924.1|341685_342549_+	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	74.3	5.5e-114
SQG14925.1|342575_342968_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG14926.1|343014_343644_-	copper homeostasis protein	NA	NA	NA	NA	NA
SQG14927.1|343943_344300_+	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.0	1.8e-39
SQG14928.1|344373_345201_-	3'-exo-deoxyribonuclease	NA	M1PSC0	Streptococcus_phage	79.5	2.9e-128
>prophage 4
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	353546	397707	1764453	transposase,protease,bacteriocin,tRNA	Mycobacterium_phage(14.29%)	51	NA	NA
SQG14932.1|353546_355544_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SHR2	Klosneuvirus	35.0	1.3e-86
SQG14933.1|356039_357053_+	ribonucleotide-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	53.7	2.5e-97
SQG14934.1|357056_357545_+	nrdI protein	NA	R4JF54	Bacillus_phage	37.5	1.3e-11
SQG14935.1|357511_359692_+	ribonucleoside-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.2	6.2e-170
SQG14936.1|359897_360650_-	ADP-ribosyltransferase	NA	NA	NA	NA	NA
SQG14937.1|361107_361536_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQG14938.1|361732_361984_+	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQG14939.1|362077_362578_-	phage protein	NA	NA	NA	NA	NA
SQG14940.1|362938_363175_+	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA	NA
SQG14941.1|363167_363866_+	3-ketoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	24.8	6.0e-10
SQG14942.1|363941_364901_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SQG14943.1|365233_366571_+	phosphoglycerate transporter protein	NA	NA	NA	NA	NA
SQG14944.1|366742_368125_+	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L4K9	Tupanvirus	36.0	8.5e-32
SQG14945.1|368155_368710_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
SQG14946.1|368709_368961_+	membrane protein	NA	NA	NA	NA	NA
SQG14947.1|368980_369676_+	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
SQG14948.1|369826_370168_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG14949.1|370267_370915_-	metalloregulator ScaR	NA	NA	NA	NA	NA
SQG14950.1|371060_371993_+	manganese-binding protein	NA	NA	NA	NA	NA
SQG14951.1|372056_372782_+	manganese transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.4e-17
SQG14952.1|372782_373637_+	ABC 3 transport family protein	NA	NA	NA	NA	NA
SQG14953.1|373784_374591_-	cyclophilin type peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
SQG14954.1|374807_377213_+	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
SQG14955.1|377282_377636_-	integral membrane protein	NA	NA	NA	NA	NA
SQG14956.1|377879_378305_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQG14957.1|378410_379100_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQG14958.1|379422_380151_+	uridylate kinase	NA	NA	NA	NA	NA
SQG14959.1|380179_380737_+	ribosome recycling factor	NA	NA	NA	NA	NA
SQG14960.1|380845_381703_+	s1 RNA binding domain	NA	NA	NA	NA	NA
SQG14961.1|381775_382285_+	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SQG14962.1|382281_382497_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG14963.1|382652_383834_+	lysM domain protein	NA	A0A0E3XB61	Gordonia_phage	39.6	2.1e-15
SQG14964.1|384147_385920_+	myosin-cross-reactive antigen	NA	NA	NA	NA	NA
SQG14965.1|386078_387131_+	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
SQG14966.1|387176_387752_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA	NA
SQG14967.1|387910_388408_+|protease	metalloprotease	protease	NA	NA	NA	NA
SQG14968.1|388388_388796_+	diacylglycerol kinase	NA	NA	NA	NA	NA
SQG14969.1|388915_389812_+	GTP-binding protein Era	NA	NA	NA	NA	NA
SQG14970.1|389832_390309_+	phosphohydrolase	NA	NA	NA	NA	NA
SQG14971.1|390805_391000_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG14972.1|391413_391644_+	truncated SilB	NA	NA	NA	NA	NA
SQG14973.1|392139_392850_-|bacteriocin	bacteriocin processing peptidase	bacteriocin	NA	NA	NA	NA
SQG14974.1|392954_393191_-|bacteriocin	bacteriocin processing peptidase	bacteriocin	NA	NA	NA	NA
SQG14975.1|393488_393713_+	blpU	NA	NA	NA	NA	NA
SQG14976.1|393690_393867_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG14977.1|393952_394180_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG14978.1|395080_395311_+|bacteriocin	bacteriocin class II with double-glycine leader peptide	bacteriocin	NA	NA	NA	NA
SQG14979.1|395359_395677_+	role in replication	NA	NA	NA	NA	NA
SQG14980.1|396056_396512_+|transposase	transposase	transposase	U5P429	Shigella_phage	34.8	3.4e-14
SQG14981.1|396666_396882_+	Transposase	NA	U5P429	Shigella_phage	45.5	7.0e-10
SQG14982.1|397095_397707_+|transposase	truncated transposase	transposase	A0A1X9I5T2	Streptococcus_phage	96.6	4.6e-99
>prophage 5
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	429891	474655	1764453	transposase,portal,tRNA	Bacillus_phage(15.38%)	45	NA	NA
SQG15015.1|429891_431835_+|tRNA	threonyl-tRNA synthetase	tRNA	A0A2K9L297	Tupanvirus	38.7	1.0e-120
SQG15016.1|431975_432968_+	antibiotic transport system ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	27.1	8.2e-13
SQG15017.1|432969_433788_+	Daunorubicin resistance transmembrane protein	NA	NA	NA	NA	NA
SQG15018.1|433789_434575_+	ABC transporter permease	NA	NA	NA	NA	NA
SQG15019.1|435320_436469_+	Acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
SQG15020.1|436425_437673_+	long-chain-fatty-acid--CoA ligase	NA	NA	NA	NA	NA
SQG15021.1|437767_438763_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG15022.1|438924_439635_+	two-component response regulator	NA	W8CYM9	Bacillus_phage	39.0	3.7e-39
SQG15023.1|439627_440980_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	35.0	4.7e-35
SQG15024.1|440983_441793_+	metallo-beta-lactamase superfamily protein	NA	A0A2H4J3R0	uncultured_Caudovirales_phage	37.4	4.8e-35
SQG15025.1|442224_442917_+	ribonuclease III	NA	M4QMG4	Micromonas_pusilla_virus	34.7	3.8e-25
SQG15026.1|442917_446457_+	chromosome segregation protein SMC	NA	NA	NA	NA	NA
SQG15027.1|446709_447582_-	transcriptional regulator	NA	NA	NA	NA	NA
SQG15028.1|447834_448707_+	shikimate 5-dehydrogenase	NA	NA	NA	NA	NA
SQG15029.1|448703_449540_+	xylose isomerase-like TIM barrel family protein	NA	NA	NA	NA	NA
SQG15030.1|449541_450276_+	L-glutamate ligase	NA	NA	NA	NA	NA
SQG15031.1|450268_451255_+	dehydrogenase	NA	NA	NA	NA	NA
SQG15032.1|451264_452464_+	S-adenosylmethionine synthetase family protein	NA	NA	NA	NA	NA
SQG15033.1|452447_453416_+	serine kinase	NA	NA	NA	NA	NA
SQG15034.1|453470_454460_+	glycosyl transferase 2 family protein	NA	NA	NA	NA	NA
SQG15035.1|455151_456309_+	UDP-glucose 6-dehydrogenase	NA	M1GX70	Paramecium_bursaria_Chlorella_virus	41.1	3.6e-76
SQG15036.1|456393_457602_+	major facilitator superfamily protein	NA	NA	NA	NA	NA
SQG15037.1|457704_457914_-	vanUG2	NA	A0A2K5B263	Erysipelothrix_phage	61.5	1.3e-16
SQG15038.1|457903_459562_-	ATPase	NA	NA	NA	NA	NA
SQG15039.1|459552_459777_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG15040.1|459776_460661_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG15041.1|460916_461219_+	Plasmid stabilization system antitoxin protein	NA	NA	NA	NA	NA
SQG15042.1|461218_461524_+	prophage LambdaSa04, RelE/ParE family protein	NA	NA	NA	NA	NA
SQG15043.1|461542_461674_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG15044.1|461670_461763_+	cytoplasmic protein	NA	NA	NA	NA	NA
SQG15045.1|461867_462320_+|portal	portal protein	portal	E4ZFM3	Streptococcus_phage	84.9	5.7e-62
SQG15046.1|462385_462694_+	prophage minor structural protein	NA	Q6DMT0	Streptococcus_phage	64.9	5.7e-21
SQG15047.1|463111_464098_+	huntington interacting protein HYPE	NA	D7RWK9	Brochothrix_phage	24.4	1.1e-09
SQG15048.1|464468_464798_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG15049.1|464940_465315_+|transposase	degenerate transposase	transposase	NA	NA	NA	NA
SQG15050.1|465413_465710_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG15051.1|465693_466482_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG15052.1|466639_467854_+	putative transporter	NA	NA	NA	NA	NA
SQG15053.1|467855_468737_+	methyltransferase	NA	NA	NA	NA	NA
SQG15054.1|468726_469728_+	asparagine ligase A	NA	M1PB22	Moumouvirus	33.5	5.2e-23
SQG15055.1|469741_470989_+	ATP-grasp domain-containing protein	NA	NA	NA	NA	NA
SQG15056.1|471216_471933_+	microcin C7 self-immunity protein	NA	NA	NA	NA	NA
SQG15057.1|471945_473157_+|tRNA	histidyl-tRNA synthetase protein HisS	tRNA	NA	NA	NA	NA
SQG15058.1|473529_473886_-	Mobile element protein	NA	U5P429	Shigella_phage	32.8	3.6e-11
SQG15059.1|474379_474655_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 6
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	630193	640797	1764453		Streptococcus_phage(57.14%)	9	NA	NA
SQG15198.1|630193_632404_-	phosphoglycerol transferase	NA	W6LM83	Streptococcus_phage	69.2	2.9e-268
SQG15199.1|632511_633675_+	SAM-dependent methyltransferase	NA	W6LLI2	Streptococcus_phage	64.9	7.6e-143
SQG15200.1|633671_634358_+	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
SQG15201.1|634451_635618_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	5.8e-34
SQG15202.1|635678_636020_+	hypothetical cytosolic protein	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	5.9e-19
SQG15203.1|636240_637593_+	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	23.8	1.0e-29
SQG15204.1|637672_638950_-	folylpolyglutamate synthase	NA	NA	NA	NA	NA
SQG15205.1|638979_639420_-	membrane protein	NA	NA	NA	NA	NA
SQG15206.1|639654_640797_+	aminotransferase class-V family protein	NA	A0A1X6WFP1	Pacmanvirus	27.0	4.1e-24
>prophage 7
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	942113	1053959	1764453	tail,terminase,portal,protease,holin,transposase,integrase,tRNA	Streptococcus_phage(52.31%)	123	962193:962209	1021912:1021928
SQG15489.1|942113_942998_-|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
SQG15490.1|943113_944454_-	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA	NA
SQG15491.1|944559_945516_-	membrane protein	NA	NA	NA	NA	NA
SQG15492.1|945526_946123_-	type I restriction-modification system specificty subunit	NA	NA	NA	NA	NA
SQG15493.1|946214_948851_-	permease family protein	NA	NA	NA	NA	NA
SQG15494.1|948865_949567_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.0	4.9e-36
SQG15495.1|949684_950227_+	bacterial regulatory s, tetR family protein	NA	NA	NA	NA	NA
SQG15496.1|950369_951011_-	bacterial regulatory s, gntR family protein	NA	NA	NA	NA	NA
SQG15497.1|951173_951662_-	general stress protein, Gls24 family	NA	NA	NA	NA	NA
SQG15498.1|951672_951873_-	csbD-like family protein	NA	J7KJ36	Streptococcus_phage	50.0	1.8e-07
SQG15499.1|951913_952453_-	response regulator	NA	NA	NA	NA	NA
SQG15500.1|952465_952654_-	membrane protein	NA	NA	NA	NA	NA
SQG15501.1|952664_953252_-	membrane protein	NA	NA	NA	NA	NA
SQG15502.1|953312_953561_-	transglycosylase associated family protein	NA	NA	NA	NA	NA
SQG15503.1|953923_956242_-	DNA helicase II / ATP-dependent DNA helicase PcrA	NA	A7KV33	Bacillus_phage	41.2	7.8e-131
SQG15504.1|956771_958094_+	amino acid symporter	NA	NA	NA	NA	NA
SQG15505.1|958213_959449_+	cation diffusion facilitator transporter family protein	NA	NA	NA	NA	NA
SQG15506.1|959818_960592_-	protein B	NA	NA	NA	NA	NA
SQG15507.1|960962_961799_-	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA	NA
SQG15508.1|961814_962444_-	histidine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.3e-27
962193:962209	attL	TTGAAAATCTTGGAAAA	NA	NA	NA	NA
SQG15509.1|962453_963095_-	histidine transporter permease	NA	NA	NA	NA	NA
SQG15510.1|963201_963537_-	phosphonoacetate hydrolase	NA	NA	NA	NA	NA
SQG15511.1|963732_965547_-	glucosamine-fructose-6-phosphate aminotransferase	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.9	5.2e-98
SQG15512.1|965722_966280_-	signal peptidase I	NA	NA	NA	NA	NA
SQG15513.1|966497_968000_-	pyruvate kinase	NA	NA	NA	NA	NA
SQG15514.1|968062_969076_-	6-phosphofructokinase	NA	NA	NA	NA	NA
SQG15515.1|969155_972266_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.9	2.9e-120
SQG15516.1|972450_972822_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQG15517.1|972821_973520_+	ABC transporter family protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
SQG15518.1|973529_974315_+	ABC transporter permease protein	NA	NA	NA	NA	NA
SQG15519.1|974445_975060_-	membrane protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
SQG15520.1|975650_975839_-	phage protein	NA	A3F673	Streptococcus_phage	84.7	1.2e-21
SQG15521.1|975951_976734_-	Enterotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	45.8	4.3e-49
SQG15522.1|976946_978071_-	phage protein, Fic family	NA	D7RWK9	Brochothrix_phage	49.1	3.1e-93
SQG15523.1|978208_979417_-	phage-associated cell wall hydrolase	NA	Q938J4	Temperate_phage	86.3	1.2e-212
SQG15524.1|979532_979760_-	phage protein	NA	A7J2B3	Streptococcus_phage	98.7	5.8e-31
SQG15525.1|979756_980032_-|holin	phage holin	holin	A7J2B2	Streptococcus_phage	100.0	2.6e-41
SQG15526.1|980041_980659_-	phage protein	NA	A3F662	Streptococcus_phage	83.4	1.1e-71
SQG15527.1|980661_981093_-	phage protein	NA	Q938J8	Temperate_phage	89.5	1.3e-63
SQG15528.1|981104_983123_-	Phage infection protein	NA	Q938J9	Temperate_phage	71.6	4.4e-170
SQG15529.1|983132_984242_-	hyaluronoglucosaminidase	NA	A7J2A8	Streptococcus_phage	71.8	4.9e-123
SQG15530.1|984241_986389_-	Phage endopeptidase	NA	Q938K1	Temperate_phage	93.7	0.0e+00
SQG15531.1|986385_987093_-	phage protein	NA	Q938K2	Temperate_phage	69.8	2.4e-91
SQG15532.1|987092_991016_-|tail	phage tail protein	tail	J7KDT4	Streptococcus_phage	48.9	4.6e-240
SQG15533.1|991225_991552_-	phage protein	NA	J7KK85	Streptococcus_phage	75.9	1.3e-39
SQG15534.1|991604_992216_-|tail	major tail protein	tail	J7KKC8	Streptococcus_phage	76.2	3.8e-77
SQG15535.1|992234_992660_-	phage protein	NA	J7KBZ9	Streptococcus_phage	85.1	1.7e-68
SQG15536.1|992656_993034_-	phage protein	NA	J7KDM3	Streptococcus_phage	75.2	2.5e-47
SQG15537.1|993030_993354_-	phage protein	NA	J7KJ42	Streptococcus_phage	80.0	5.9e-45
SQG15538.1|993365_993668_-	phage protein	NA	J7KC36	Streptococcus_phage	86.7	1.1e-42
SQG15539.1|993812_994997_-	phage protein	NA	J7KJ82	Streptococcus_phage	84.5	1.2e-180
SQG15540.1|995022_995688_-|protease	phage ClpP protease	protease	M1Q115	Streptococcus_phage	79.0	5.4e-93
SQG15541.1|995665_996886_-|portal	phage portal protein	portal	J7KDU3	Streptococcus_phage	81.4	1.0e-185
SQG15542.1|996919_997186_-	phage protein	NA	Q938K9	Temperate_phage	86.4	6.2e-32
SQG15543.1|997178_997349_-	phage protein	NA	J7KK43	Streptococcus_phage	58.3	3.0e-08
SQG15544.1|997345_999100_-|terminase	phage terminase, large subunit	terminase	J7KKD1	Streptococcus_phage	97.3	0.0e+00
SQG15545.1|999114_999582_-|terminase	phage terminase, small subunit	terminase	J7KC46	Streptococcus_phage	99.4	3.0e-82
SQG15546.1|999752_1000091_-	Phage endonuclease	NA	J7KH36	Streptococcus_phage	90.7	3.0e-55
SQG15547.1|1000676_1001117_-	phage encoded transcriptional regulator, ArpU family	NA	Q938L8	Temperate_phage	98.6	2.1e-77
SQG15548.1|1001389_1002025_-	phage protein	NA	L0P368	Streptococcus_phage	68.9	2.2e-88
SQG15549.1|1002024_1002426_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG15550.1|1002616_1002991_-	DNA methyltransferase - phage associated	NA	A0A097PAU8	Streptococcus_pyogenes_phage	99.2	2.6e-68
SQG15551.1|1003015_1003300_-	phage membrane protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	87.2	6.1e-38
SQG15552.1|1003296_1003500_-	phage protein	NA	A0A1P8VVP9	Streptococcus_phage	100.0	3.1e-07
SQG15553.1|1003483_1003804_-	phage protein	NA	A0A1P8VVL5	Streptococcus_phage	94.3	7.1e-51
SQG15554.1|1003800_1004214_-	phage protein	NA	A0A2H4JHE6	uncultured_Caudovirales_phage	50.0	2.8e-15
SQG15555.1|1004475_1005951_-	DNA primase	NA	A0A1P8VVM0	Streptococcus_phage	86.3	5.5e-247
SQG15556.1|1005940_1006744_-	phage protein	NA	A0A1P8VVM6	Streptococcus_phage	98.9	4.3e-153
SQG15557.1|1006755_1007214_-	phage protein	NA	A0A1P8VVN0	Streptococcus_phage	99.3	5.0e-82
SQG15558.1|1007229_1008459_-	phage DNA/RNA helicase	NA	A0A1P8VVM2	Streptococcus_phage	99.5	2.8e-236
SQG15559.1|1008560_1009241_-	phage protein	NA	A0A1P8VVS4	Streptococcus_phage	100.0	1.6e-129
SQG15560.1|1009241_1009724_-	phage protein	NA	A0A1P8VVS5	Streptococcus_phage	99.4	4.6e-78
SQG15561.1|1009952_1010267_-	Transcriptional regulator, Cro/CI family	NA	A0A1P8VVN6	Streptococcus_phage	94.2	2.3e-49
SQG15562.1|1010413_1010710_-	phage protein	NA	A0A097PAT8	Streptococcus_pyogenes_phage	100.0	2.1e-49
SQG15563.1|1010787_1010973_-	phage regulatory protein	NA	A0A1X9I6I3	Streptococcus_phage	72.1	3.3e-16
SQG15564.1|1011139_1011379_+	phage protein	NA	NA	NA	NA	NA
SQG15565.1|1011529_1011739_+	phage protein	NA	NA	NA	NA	NA
SQG15566.1|1011697_1011943_-	phage protein	NA	A0A097PAP6	Streptococcus_pyogenes_phage	96.3	4.2e-35
SQG15567.1|1011954_1012194_-	Cro/CI family phage transcriptional regulator	NA	A0A097PBE6	Streptococcus_pyogenes_phage	100.0	4.8e-36
SQG15568.1|1012267_1012654_+	phage protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
SQG15569.1|1012642_1012849_-	phage protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	92.8	1.4e-28
SQG15570.1|1012905_1013685_+	Uncharacterised protein	NA	A0A1S5S7L0	Streptococcus_phage	57.4	6.2e-48
SQG15571.1|1013620_1013785_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG15572.1|1013818_1013965_-	phage protein	NA	A0A097PAP2	Streptococcus_pyogenes_phage	92.3	6.6e-20
SQG15573.1|1014061_1014163_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG15574.1|1014337_1015126_+	Phage transcriptional repressor	NA	A0A1S5SD15	Streptococcus_phage	62.6	2.9e-85
SQG15575.1|1015135_1015441_+	phage membrane protein	NA	NA	NA	NA	NA
SQG15576.1|1015560_1016649_+|integrase	integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	99.2	4.7e-203
SQG15577.1|1017011_1017632_+	phage protein	NA	NA	NA	NA	NA
SQG15578.1|1017888_1020153_-	glycogen phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
SQG15579.1|1020187_1021681_-	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
SQG15580.1|1021794_1022814_-	LacI family transcription regulator	NA	C6ZCU4	Enterobacteria_phage	27.8	5.7e-17
1021912:1021928	attR	TTTTCCAAGATTTTCAA	NA	NA	NA	NA
SQG15581.1|1023056_1024304_+	maltose/maltodextrin-binding protein	NA	NA	NA	NA	NA
SQG15582.1|1024577_1025939_+	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA	NA
SQG15583.1|1025938_1026775_+	maltose transport system permease	NA	NA	NA	NA	NA
SQG15584.1|1026955_1027207_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG15585.1|1027148_1027736_+|transposase	truncated transposase	transposase	Q9MBM9	Staphylococcus_prophage	39.6	5.4e-28
SQG15586.1|1028249_1029233_-	alpha/beta fold family hydrolase	NA	NA	NA	NA	NA
SQG15587.1|1029263_1030514_-	D-alanine transfer from undecaprenol-phosphate to the poly(Glycerophosphate) chain	NA	NA	NA	NA	NA
SQG15588.1|1030506_1030746_-	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA	NA
SQG15589.1|1030763_1032020_-	Protein dltB	NA	NA	NA	NA	NA
SQG15590.1|1032016_1033555_-	D-alanine--poly(phosphoribitol) ligase subunit 1	NA	A0A2K9KZV5	Tupanvirus	28.0	1.9e-40
SQG15591.1|1033566_1033710_-	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA	NA
SQG15592.1|1033973_1035965_-	excinuclease ABC subunit B	NA	NA	NA	NA	NA
SQG15593.1|1036157_1038332_+	glutamine-binding protein/glutamine transpor tsystem permease protein	NA	NA	NA	NA	NA
SQG15594.1|1038331_1039072_+	glutamine transport ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	42.1	1.5e-35
SQG15595.1|1039219_1039372_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG15596.1|1039368_1040748_-	PTS system cellobiose-specific transporter subunit IIC	NA	NA	NA	NA	NA
SQG15597.1|1040925_1041375_-	Domain of uncharacterised function (DUF3284)	NA	NA	NA	NA	NA
SQG15598.1|1041371_1041707_-	PTS system cellobiose-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQG15599.1|1041709_1042021_-	PTS system cellobiose-specific component IIB	NA	NA	NA	NA	NA
SQG15600.1|1042043_1044038_-	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQG15601.1|1044143_1045238_-	outer surface protein	NA	NA	NA	NA	NA
SQG15602.1|1045246_1046647_-	beta-glucosidase	NA	NA	NA	NA	NA
SQG15603.1|1046871_1047567_+	nicotinamide mononucleotide transporter	NA	NA	NA	NA	NA
SQG15604.1|1047571_1047730_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQG15605.1|1047798_1049112_-	GTPase ObgE	NA	NA	NA	NA	NA
SQG15606.1|1049169_1049298_-	membrane protein	NA	NA	NA	NA	NA
SQG15607.1|1049539_1050055_+|transposase	transposase	transposase	NA	NA	NA	NA
SQG15608.1|1050075_1050882_+|transposase	transposase, IS861	transposase	A0A1B1P773	Bacillus_phage	49.3	1.2e-62
SQG15609.1|1051181_1052054_-	nicotinate-nucleotide pyrophosphorylase	NA	NA	NA	NA	NA
SQG15610.1|1052277_1053588_+	membrane protein	NA	NA	NA	NA	NA
SQG15611.1|1053665_1053959_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 8
LS483379	Streptococcus pyogenes strain NCTC10874 genome assembly, chromosome: 1	1764453	1682693	1702497	1764453		Streptococcus_phage(58.82%)	24	NA	NA
SQG16172.1|1682693_1683914_-	transporter	NA	A0A2H4PQR6	Staphylococcus_phage	24.3	4.6e-05
SQG16173.1|1683924_1685907_-	DNA mismatch repair protein	NA	A0A1B2LRQ5	Wolbachia_phage	30.4	5.1e-62
SQG16174.1|1686001_1687153_-	DNA integration/recombination/inversion protein	NA	A0A1X9I5Y5	Streptococcus_phage	44.9	3.6e-84
SQG16175.1|1688427_1689108_-	Cro/CI family transcriptional regulator	NA	A0A1W6JQE6	Staphylococcus_phage	47.9	1.3e-33
SQG16176.1|1689271_1689469_+	HTH DNA-binding protein	NA	A0A1X9I5U5	Streptococcus_phage	63.1	1.3e-15
SQG16177.1|1689482_1690091_+	Phage antirepressor protein	NA	A0A1W6JPC3	Staphylococcus_phage	47.4	2.1e-43
SQG16178.1|1690111_1690519_+	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
SQG16179.1|1690531_1690654_+	phage protein	NA	NA	NA	NA	NA
SQG16180.1|1690936_1691458_+	phage protein	NA	R9QNB1	Lactococcus_phage	40.2	7.4e-21
SQG16181.1|1691702_1692035_+	phage protein	NA	NA	NA	NA	NA
SQG16182.1|1692031_1692226_+	phage protein	NA	NA	NA	NA	NA
SQG16183.1|1692238_1692601_+	phage protein	NA	NA	NA	NA	NA
SQG16184.1|1692597_1692927_+	phage protein	NA	NA	NA	NA	NA
SQG16185.1|1692929_1693202_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	6.1e-19
SQG16186.1|1693202_1694060_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	75.2	5.3e-125
SQG16187.1|1694028_1695717_+	phage/plasmid primase, P4 family, C-terminal domain protein	NA	A0A1X9I717	Streptococcus_phage	82.1	9.4e-259
SQG16188.1|1696003_1696177_+	phage protein	NA	A0A1X9I5U0	Streptococcus_phage	61.4	3.9e-11
SQG16189.1|1696182_1696356_+	phage protein	NA	NA	NA	NA	NA
SQG16190.1|1696357_1696867_+	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	62.5	4.2e-29
SQG16191.1|1696941_1697430_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
SQG16192.1|1697833_1698196_+	phage protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	8.7e-05
SQG16193.1|1698170_1698554_+	phage protein	NA	A0A286QPF1	Streptococcus_phage	35.5	1.1e-08
SQG16194.1|1698754_1699360_+	phage protein	NA	NA	NA	NA	NA
SQG16195.1|1699941_1702497_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	23.3	1.0e-43
