The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483387	Streptococcus agalactiae strain NCTC8187 genome assembly, chromosome: 1	2052456	30636	42704	2052456		Microbacterium_phage(14.29%)	8	NA	NA
SQG25436.1|30636_34365_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	27.0	1.6e-40
SQG25437.1|34598_36053_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	4.9e-54
SQG25438.1|36080_37103_+	phosphoribosylaminoimidazole synthetase	NA	A0A1D7SE90	Cyanophage	44.6	9.6e-65
SQG25439.1|37270_37822_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	1.8e-25
SQG25440.1|37841_38594_+	acetyltransferase, GNAT family	NA	NA	NA	NA	NA
SQG25441.1|38613_40161_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	Q58MG4	Prochlorococcus_phage	48.6	5.7e-77
SQG25442.1|40353_41253_+	peptidase, M23/M37 family	NA	A0A221J6U0	Arthrobacter_phage	45.9	4.1e-19
SQG25443.1|41399_42704_+	Group B streptococcal surface immunogenic protein	NA	A0A2D1GNZ3	Streptomyces_phage	40.5	1.7e-05
>prophage 2
LS483387	Streptococcus agalactiae strain NCTC8187 genome assembly, chromosome: 1	2052456	137184	207369	2052456	holin,transposase,protease,tRNA,lysis	Planktothrix_phage(13.33%)	59	NA	NA
SQG25542.1|137184_138072_+|protease	Putative stomatin/prohibitin-family membrane protease subunit YbbK	protease	A0A1V0SL90	Klosneuvirus	35.4	9.6e-37
SQG25543.1|138163_138280_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG25544.1|138472_139495_+|transposase	ISSag3, transposase	transposase	Q9MBM9	Staphylococcus_prophage	32.7	7.1e-36
SQG25545.1|140145_143622_-	IgA-binding beta antigen	NA	NA	NA	NA	NA
SQG25546.1|143701_144229_-	isoprenylcysteine carboxyl methyltransferase (ICMT) family protein	NA	NA	NA	NA	NA
SQG25547.1|144337_145678_-	sensor histidine kinase	NA	NA	NA	NA	NA
SQG25548.1|145674_146328_-	DNA-binding response regulator	NA	NA	NA	NA	NA
SQG25549.1|146531_146921_-	Mobile element protein	NA	NA	NA	NA	NA
SQG25550.1|146953_147337_-	Mobile element protein	NA	NA	NA	NA	NA
SQG25551.1|147437_147608_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG25552.1|147948_148689_-	Amino acid transport ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.4	3.8e-23
SQG25553.1|148698_150249_-	Amino acid ABC transporter, glutamine-binding protein/permease protein	NA	NA	NA	NA	NA
SQG25554.1|150384_152268_+	Predicted membrane protein (DUF2207)	NA	NA	NA	NA	NA
SQG25555.1|152313_153153_+	Undecaprenyl-diphosphatase	NA	NA	NA	NA	NA
SQG25556.1|153272_154028_+	Negative regulator of genetic competence MecA	NA	NA	NA	NA	NA
SQG25557.1|154029_155190_+	Undecaprenyl-phosphate N-acetylglucosaminyl 1-phosphate transferase	NA	NA	NA	NA	NA
SQG25558.1|155354_156125_+	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	26.9	3.9e-10
SQG25559.1|156161_157424_+	Iron-sulfur cluster assembly protein SufD	NA	NA	NA	NA	NA
SQG25560.1|157425_158658_+	Cysteine desulfurase, SufS subfamily	NA	Q2XUY6	environmental_halophage	43.2	3.7e-103
SQG25561.1|158644_159088_+	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	NA	NA	NA	NA	NA
SQG25562.1|159187_160606_+	Iron-sulfur cluster assembly protein SufB	NA	NA	NA	NA	NA
SQG25563.1|160677_161865_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
SQG25564.1|162017_163253_-	serine-type D-Ala-D-Ala carboxypeptidase (penicilin binding protein)	NA	NA	NA	NA	NA
SQG25565.1|163493_165149_+	Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA (TC 3.A.1.5.1)	NA	NA	NA	NA	NA
SQG25566.1|165267_166182_+	Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1)	NA	NA	NA	NA	NA
SQG25567.1|166191_167223_+	Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1)	NA	NA	NA	NA	NA
SQG25568.1|167235_168282_+	Oligopeptide transport ATP-binding protein OppD (TC 3.A.1.5.1)	NA	G9BWD6	Planktothrix_phage	32.9	2.5e-20
SQG25569.1|168281_169214_+	Oligopeptide transport ATP-binding protein OppF (TC 3.A.1.5.1)	NA	F2Y1V6	Organic_Lake_phycodnavirus	27.3	2.2e-07
SQG25570.1|174752_175604_+	4-diphosphocytidyl-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
SQG25571.1|175689_176133_+	Transcriptional repressor AdcR for Zn(2+)-responsive expression	NA	NA	NA	NA	NA
SQG25572.1|176135_176846_+	Zinc ABC transporter, ATP-binding protein ZnuC	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.9	2.6e-08
SQG25573.1|176835_177648_+	Zinc ABC transporter, inner membrane permease protein ZnuB	NA	NA	NA	NA	NA
SQG25574.1|177858_178890_-	Streptococcal extracellular nuclease 3	NA	NA	NA	NA	NA
SQG25575.1|179468_180728_-|tRNA	tyrosyl-tRNA synthetase	tRNA	A0A1S6UA79	Serratia_phage	41.0	4.0e-73
SQG25576.1|180838_183136_+	Multimodular transpeptidase-transglycosylase	NA	NA	NA	NA	NA
SQG25577.1|183659_187235_+	DNA-directed RNA polymerase subunit beta	NA	A0A2P0VMZ3	Tetraselmis_virus	26.1	9.8e-40
SQG25578.1|187351_191002_+	DNA-directed RNA polymerase subunit beta'	NA	R4TQM7	Phaeocystis_globosa_virus	25.1	2.6e-64
SQG25579.1|191115_191481_+	DNA binding protein, FIG046916	NA	NA	NA	NA	NA
SQG25580.1|191653_192625_+	Late competence protein ComGA, access of DNA to ComEA	NA	NA	NA	NA	NA
SQG25581.1|192689_193562_+	competence protein ComG	NA	NA	NA	NA	NA
SQG25582.1|193558_194014_+	hypothetical competence proteins	NA	NA	NA	NA	NA
SQG25583.1|193991_194363_+	Late competence protein ComGG, FIG068335	NA	NA	NA	NA	NA
SQG25584.1|194477_195452_+	Adenine-specific methyltransferase	NA	NA	NA	NA	NA
SQG25585.1|195483_196677_+	Acetate kinase	NA	NA	NA	NA	NA
SQG25586.1|196828_197035_+	Transcriptional regulator, Cro/CI family	NA	NA	NA	NA	NA
SQG25587.1|197271_197727_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG25588.1|197795_198461_+|protease	Membrane-bound protease, CAAX family	protease	NA	NA	NA	NA
SQG25589.1|198481_199252_-	Pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	34.2	9.8e-30
SQG25590.1|199321_200389_-	glutamyl-aminopeptidase(	NA	NA	NA	NA	NA
SQG25591.1|200573_200813_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG25592.1|200973_201258_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQG25593.1|201254_201578_+	FIG009688: Thioredoxin	NA	NA	NA	NA	NA
SQG25594.1|201610_202237_+|tRNA	Phenylalanyl-tRNA synthetase domain protein (Bsu YtpR)	tRNA	NA	NA	NA	NA
SQG25595.1|202290_203007_-	probable S-adenosylmethionine-dependent methyltransferase	NA	NA	NA	NA	NA
SQG25596.1|203087_203483_+|tRNA	FIG107367: tRNA-binding protein	tRNA	A1EAD1	Streptococcus_phage	50.0	1.9e-29
SQG25597.1|203606_204251_+	Hydrolase, haloacid dehalogenase-like family	NA	A0A1D8KNV9	Synechococcus_phage	29.2	2.2e-11
SQG25598.1|204277_206023_+|lysis	Autolysis histidine kinase LytS	lysis	Q9EYF3	Enterobacteria_phage	28.8	1.0e-58
SQG25599.1|206003_206744_+|lysis	Autolysis response regulater LytR	lysis	NA	NA	NA	NA
SQG25600.1|206913_207369_+|holin	Antiholin-like protein LrgA	holin	NA	NA	NA	NA
>prophage 3
LS483387	Streptococcus agalactiae strain NCTC8187 genome assembly, chromosome: 1	2052456	1513203	1523937	2052456		Streptococcus_phage(84.62%)	14	NA	NA
SQG26841.1|1513203_1514031_+	Exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	78.4	5.1e-125
SQG26842.1|1514071_1514428_-	Arsenate reductase	NA	M1PLC0	Streptococcus_phage	72.6	5.2e-42
SQG26843.1|1514429_1514906_-	Methylated-DNA--protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	50.9	7.1e-39
SQG26844.1|1514962_1516144_-	D-3-phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	75.3	1.1e-168
SQG26845.1|1516206_1516755_-	Acetyltransferase	NA	M1PSC3	Streptococcus_phage	58.4	1.1e-54
SQG26846.1|1516822_1517914_-	Phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	78.0	1.7e-165
SQG26847.1|1518046_1518682_+	Cytoplasmic copper homeostasis protein CutC	NA	NA	NA	NA	NA
SQG26848.1|1518951_1519815_-	rRNA small subunit methyltransferase I	NA	M1PLC5	Streptococcus_phage	70.7	3.7e-110
SQG26849.1|1519820_1520147_-	DNA replication intiation control protein YabA	NA	M1PFV3	Streptococcus_phage	61.1	3.2e-30
SQG26850.1|1520177_1521041_-	DNA polymerase III delta prime subunit	NA	M1NSC1	Streptococcus_phage	49.7	1.2e-73
SQG26851.1|1521060_1521696_-	Thymidylate kinase	NA	M1PSC7	Streptococcus_phage	61.1	4.9e-67
SQG26852.1|1521784_1522444_-	Acetoin utilization acuB protein	NA	M1NSC5	Streptococcus_phage	56.0	6.2e-65
SQG26853.1|1522462_1523173_-	ABC transporter ATP-binding protein; Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1)	NA	G9BWD6	Planktothrix_phage	28.5	4.7e-18
SQG26854.1|1523172_1523937_-	Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1)	NA	A0A2H4PQG7	Staphylococcus_phage	24.8	2.6e-14
>prophage 4
LS483387	Streptococcus agalactiae strain NCTC8187 genome assembly, chromosome: 1	2052456	1994617	2010970	2052456		Streptococcus_phage(66.67%)	28	NA	NA
SQG27324.1|1994617_1995310_-	Gp21 protein	NA	A0A059T7P7	Listeria_phage	48.9	1.0e-54
SQG27325.1|1995422_1995650_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG27326.1|1995788_1995974_-	phage protein	NA	NA	NA	NA	NA
SQG27327.1|1996004_1996382_-	Phage encoded transcriptional regulator, ArpU family	NA	NA	NA	NA	NA
SQG27328.1|1996356_1996719_-	phage protein	NA	NA	NA	NA	NA
SQG27329.1|1997120_1997609_-	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	56.2	7.3e-47
SQG27330.1|1997682_1998240_-	Uncharacterised protein	NA	A0A1X9I5U4	Streptococcus_phage	58.9	4.2e-30
SQG27331.1|1998320_1999157_-	putative DNA replication protein	NA	A0A1P8BL54	Lactococcus_phage	68.3	2.3e-32
SQG27332.1|1999146_1999314_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG27333.1|1999310_1999583_-	phage protein	NA	A0A1X9I5U9	Streptococcus_phage	70.9	1.1e-28
SQG27334.1|1999575_1999917_-	phage protein	NA	NA	NA	NA	NA
SQG27335.1|1999913_2000276_-	phage protein	NA	NA	NA	NA	NA
SQG27336.1|2000287_2000482_-	phage protein	NA	NA	NA	NA	NA
SQG27337.1|2000478_2000811_-	phage protein	NA	NA	NA	NA	NA
SQG27338.1|2000899_2001352_-	phage protein	NA	A0A1X9I5V7	Streptococcus_phage	35.6	2.0e-06
SQG27339.1|2001491_2001668_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQG27340.1|2001893_2002067_-	Phage protein	NA	NA	NA	NA	NA
SQG27341.1|2002165_2002804_-	prophage ps3 protein 13	NA	NA	NA	NA	NA
SQG27342.1|2003026_2003296_-	Prophage antirepressor	NA	NA	NA	NA	NA
SQG27343.1|2003295_2003916_-	BRO family, N-terminal domain protein	NA	A0A1W6JPC3	Staphylococcus_phage	43.0	2.9e-40
SQG27344.1|2003939_2004140_-	transcription regulator, probable	NA	NA	NA	NA	NA
SQG27345.1|2004345_2004960_+	prophage Sa05, DNA-binding protein	NA	A0A1X9I723	Streptococcus_phage	68.7	2.6e-17
SQG27346.1|2004971_2005259_+	Uncharacterised protein	NA	A0A286QMZ8	Streptococcus_phage	61.4	1.9e-10
SQG27347.1|2005797_2006763_+	Protein of uncharacterised function (DUF3644)	NA	A0A0N9RUA4	Staphylococcus_phage	51.1	9.3e-86
SQG27348.1|2007101_2008268_+	Integrase/recombinase, phage associated	NA	A0A1X9I5Y5	Streptococcus_phage	69.8	2.5e-154
SQG27349.1|2008374_2008986_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
SQG27350.1|2009315_2009603_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQG27351.1|2009614_2010970_-	Replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	62.6	1.2e-152
>prophage 5
LS483387	Streptococcus agalactiae strain NCTC8187 genome assembly, chromosome: 1	2052456	2019290	2026494	2052456	protease	Staphylococcus_phage(33.33%)	8	NA	NA
SQG27359.1|2019290_2019995_-	immunodominant antigen A	NA	A0A2H4J6C5	uncultured_Caudovirales_phage	56.6	3.2e-27
SQG27360.1|2020100_2020640_-	Aggregation promoting factor	NA	A0A249XZV3	Enterococcus_phage	46.4	3.0e-17
SQG27361.1|2020855_2021650_-	Transmembrane component of general energizing module of ECF transporters	NA	NA	NA	NA	NA
SQG27362.1|2021642_2022485_-	ATPase component of general energizing module of ECF transporters	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.0e-15
SQG27363.1|2022460_2023300_-	ATPase component of general energizing module of ECF transporters	NA	A0A2H4PQG7	Staphylococcus_phage	26.3	1.0e-16
SQG27364.1|2023299_2023863_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
SQG27365.1|2023964_2025248_-	FIG009210: peptidase, M16 family	NA	A0A2H4UVM3	Bodo_saltans_virus	23.6	1.6e-05
SQG27366.1|2025249_2026494_-|protease	FIG001621: Zinc protease	protease	A0A1X9I714	Streptococcus_phage	41.5	1.7e-87
