The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483369	Neisseria cinerea strain NCTC10294 genome assembly, chromosome: 1	1832904	450176	557534	1832904	tRNA,integrase,terminase,protease,portal,tail,capsid	uncultured_Caudovirales_phage(11.63%)	110	450143:450169	551476:551502
450143:450169	attL	ATGCCGTCTGAAATTTCAGACGGCATT	NA	NA	NA	NA
SQF83037.1|450176_452468_-|protease	ATP-dependent protease ATP-binding protein	protease	A0A223W0B1	Agrobacterium_phage	42.5	2.7e-168
SQF83038.1|452469_452772_-|protease	ATP-dependent Clp protease adaptor protein ClpS	protease	NA	NA	NA	NA
SQF83039.1|453550_454882_-	PmbA protein	NA	NA	NA	NA	NA
SQF83040.1|455034_455547_+	x96 protein	NA	NA	NA	NA	NA
SQF83041.1|455593_456307_+	putative thiosulfate sulfur transferase	NA	NA	NA	NA	NA
SQF83042.1|456375_458076_+	RecJ	NA	A7KV88	Bacillus_phage	31.1	2.6e-67
SQF83043.1|458138_459062_+	putative transporter	NA	NA	NA	NA	NA
SQF83044.1|459138_460527_-	fumarate hydratase	NA	NA	NA	NA	NA
SQF83045.1|460675_462655_-	transketolase	NA	NA	NA	NA	NA
SQF83046.1|463218_464715_+	putative ferredoxin	NA	NA	NA	NA	NA
SQF83047.1|464717_465266_+	Inner membrane protein	NA	NA	NA	NA	NA
SQF83048.1|465325_466501_-	2-nitropropane dioxygenase	NA	NA	NA	NA	NA
SQF83049.1|466634_466751_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83050.1|467119_468505_+	DNA polymerase III subunit	NA	G3MAD3	Bacillus_virus	29.8	1.2e-09
SQF83051.1|468715_469495_-	putative ferredoxin--NADP reductase	NA	NA	NA	NA	NA
SQF83052.1|469768_472858_+	TonB-dependent receptor domain-containing protein	NA	NA	NA	NA	NA
SQF83053.1|473001_474060_+	DNA polymerase IV	NA	I6RSM4	Salmonella_phage	31.6	2.6e-17
SQF83054.1|474158_476174_-	ATP-dependent DNA helicase	NA	A7KV33	Bacillus_phage	36.6	6.9e-107
SQF83055.1|476193_476958_-	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	33.3	1.3e-18
SQF83056.1|477157_478204_+	recombinase A	NA	A0A2D1GPX2	Mycobacterium_phage	64.6	2.4e-119
SQF83057.1|478367_479288_-	Aromatic amino acid exporter YddG	NA	NA	NA	NA	NA
SQF83058.1|479412_479748_-	DNA-binding protein, YbaB/EbfC family	NA	NA	NA	NA	NA
SQF83059.1|479829_482013_-	DNA polymerase III subunits gamma and tau	NA	A0A1U9WR94	Streptococcus_virus	39.6	1.6e-45
SQF83060.1|482100_484077_-	DNA mismatch repair protein	NA	A0A1B2LRQ5	Wolbachia_phage	31.9	7.2e-85
SQF83061.1|484220_484406_+	Protein of uncharacterised function (DUF3460)	NA	NA	NA	NA	NA
SQF83062.1|484416_485085_+	O-methyltransferase	NA	NA	NA	NA	NA
SQF83063.1|485084_485801_+	putative lipoprotein	NA	NA	NA	NA	NA
SQF83064.1|485848_486334_+	phosphoribosylaminoimidazole carboxylase catalytic subunit	NA	A0A2P0VNU7	Tetraselmis_virus	43.1	8.1e-22
SQF83065.1|486405_487974_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQF83066.1|488104_488581_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
SQF83067.1|488716_488860_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83068.1|489031_489214_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83069.1|489274_490261_-|tRNA	tRNA-dihydrouridine synthase C	tRNA	NA	NA	NA	NA
SQF83070.1|490395_491583_+|integrase	Putative integrase/recombinase phage associated protein	integrase	A0A2H4J8L8	uncultured_Caudovirales_phage	44.3	1.6e-84
SQF83071.1|491641_492136_-	phage associated protein	NA	NA	NA	NA	NA
SQF83072.1|492453_492717_-	Pyocin activator protein PrtN	NA	NA	NA	NA	NA
SQF83073.1|492781_493729_-	phage associated protein	NA	A0A0M3LQ47	Mannheimia_phage	57.5	1.1e-96
SQF83074.1|493700_493931_-	Uncharacterised protein	NA	A0A0M3LSX3	Mannheimia_phage	58.1	3.6e-12
SQF83075.1|493927_494131_-	putative phage associated protein	NA	NA	NA	NA	NA
SQF83076.1|494220_494859_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83077.1|494981_495242_-	putative phage associated protein	NA	NA	NA	NA	NA
SQF83078.1|495276_495492_-	putative phage associated protein	NA	NA	NA	NA	NA
SQF83079.1|495596_495812_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83080.1|496052_496577_-	putative phage associated protein	NA	NA	NA	NA	NA
SQF83081.1|496580_497279_-	putative CI protein	NA	Q7Y5W5	Haemophilus_phage	55.1	1.7e-52
SQF83082.1|497392_497623_+	Uncharacterized protein conserved in bacteria, prophage-related	NA	NA	NA	NA	NA
SQF83083.1|497684_497807_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83084.1|497784_498132_+	putative phage associated protein	NA	NA	NA	NA	NA
SQF83085.1|498246_501093_+	Zinc-binding domain of primase-helicase family protein	NA	A0A2H4JF22	uncultured_Caudovirales_phage	32.4	1.8e-73
SQF83086.1|501691_502072_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83087.1|502218_502659_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83088.1|502728_503316_+	Terminase small subunit	NA	A0A2H4J8R0	uncultured_Caudovirales_phage	35.7	5.8e-14
SQF83089.1|503414_504998_+|terminase	Phage terminase-like protein, large subunit	terminase	Q3HQS7	Burkholderia_phage	58.4	1.5e-178
SQF83090.1|505006_506248_+|portal	phage portal protein, HK97 family	portal	Q3HQS8	Burkholderia_phage	51.1	5.0e-108
SQF83091.1|506219_507065_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	Q3HQS9	Burkholderia_phage	54.1	7.1e-74
SQF83092.1|507068_508304_+|capsid	Predicted phage phi-C31 gp36 major capsid-like protein	capsid	Q3HQT0	Burkholderia_phage	52.9	1.3e-108
SQF83093.1|508397_508685_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83094.1|508681_508999_+	uncharacterized phage protein (possible DNA packaging)	NA	Q6JIM5	Burkholderia_virus	43.1	2.9e-12
SQF83095.1|509428_509830_+	putative phage associated protein	NA	A0A088FRG2	Mycobacterium_phage	57.1	1.0e-09
SQF83096.1|509883_510513_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83097.1|510883_511405_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83098.1|511364_511724_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83099.1|511792_512437_+	putative phage associated protein	NA	A0A0H5BBY3	Pseudomonas_phage	46.9	6.7e-48
SQF83100.1|512508_512826_+	putative phage associated protein	NA	A0A2H4IYQ5	uncultured_Caudovirales_phage	29.9	5.1e-09
SQF83101.1|512843_513146_+	putative phage associated protein	NA	E7EKR1	Edwardsiella_phage	43.2	2.7e-07
SQF83102.1|513138_516348_+|tail	putative phage tail length tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	32.2	2.0e-39
SQF83103.1|516370_516697_+|tail	putative phage minor tail protein	tail	Q3HQU0	Burkholderia_phage	41.5	1.5e-16
SQF83104.1|516699_517404_+|tail	putative phage minor tail protein	tail	Q9FZU6	Neisseria_meningitidis_phage	70.4	6.6e-73
SQF83105.1|517405_518152_+|tail	putative phage tail assembly protein	tail	Q9FZU5	Neisseria_meningitidis_phage	53.3	3.6e-69
SQF83106.1|518148_518970_+|tail	putative phage tail assembly protein	tail	Q9FZU4	Neisseria_meningitidis_phage	46.1	1.5e-52
SQF83107.1|518959_522838_+|tail	putative phage tail protein	tail	Q9FZU3	Neisseria_meningitidis_phage	56.9	6.9e-281
SQF83108.1|522834_523182_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83109.1|523165_525154_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83110.1|525205_525523_+	putative phage associated protein	NA	NA	NA	NA	NA
SQF83111.1|525587_526049_+	putative phage associated protein	NA	NA	NA	NA	NA
SQF83112.1|526049_526382_+	phage associated protein	NA	NA	NA	NA	NA
SQF83113.1|526368_526704_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83114.1|526874_527246_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83115.1|527289_527949_+	Uncharacterised protein	NA	Q708K2	Streptococcus_phage	50.0	6.2e-41
SQF83116.1|527958_528423_+	Uncharacterised protein	NA	A0A0R6PGN1	Moraxella_phage	47.2	2.0e-30
SQF83117.1|528419_528884_+	Uncharacterised protein	NA	A0A0R6PGL8	Moraxella_phage	50.7	3.7e-32
SQF83118.1|528896_529394_+	phage associated protein	NA	A0A0B5L5G5	Acinetobacter_phage	54.8	3.7e-46
SQF83119.1|529508_530417_-	putative phage related protein	NA	A0A2H4FRZ6	Salmonella_phage	39.0	5.0e-41
SQF83120.1|530724_530886_+	putative phage associated protein	NA	NA	NA	NA	NA
SQF83121.1|530911_531802_-	phage associated protein	NA	D0UIK6	Aggregatibacter_phage	39.7	1.3e-17
SQF83122.1|532368_533409_+	P63C domain	NA	A0A0N7KZA9	Stx2-converting_phage	42.3	2.2e-56
SQF83123.1|533445_533634_+|tail	Minor tail protein Gp26	tail	NA	NA	NA	NA
SQF83124.1|533721_533889_-	putative phage associated protein	NA	NA	NA	NA	NA
SQF83125.1|534222_534384_+	putative phage associated protein	NA	NA	NA	NA	NA
SQF83126.1|534811_538645_-	putative oxidoreductase	NA	NA	NA	NA	NA
SQF83127.1|539174_540866_+	D-lactate dehydrogenase	NA	NA	NA	NA	NA
SQF83128.1|541054_541426_+	putative lipoprotein	NA	NA	NA	NA	NA
SQF83129.1|541585_542134_+	macrophage infectivity potentiator-related protein	NA	NA	NA	NA	NA
SQF83130.1|542229_543321_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SQF83131.1|543445_543616_+	rebredoxin	NA	NA	NA	NA	NA
SQF83132.1|543729_545799_-	TonB dependent receptor	NA	NA	NA	NA	NA
SQF83133.1|546095_548852_-	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.0	7.2e-91
SQF83134.1|548984_549344_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83135.1|549404_549905_-	chaperone protein HscB	NA	NA	NA	NA	NA
SQF83136.1|549987_550209_+	Alternative ribosome-rescue factor A	NA	NA	NA	NA	NA
SQF83137.1|550168_550489_-	HesB/YadR/YfhF family protein	NA	A0A2H4N7N5	Lake_Baikal_phage	49.5	6.3e-23
SQF83138.1|550574_550745_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83139.1|550853_551240_-	scaffold protein	NA	A0A218MKD1	uncultured_virus	77.3	1.9e-53
SQF83140.1|551306_551435_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF83141.1|551515_552730_-	cysteine desulfurase	NA	H7BUW1	unidentified_phage	38.2	6.1e-34
551476:551502	attR	ATGCCGTCTGAAATTTCAGACGGCATT	NA	NA	NA	NA
SQF83142.1|552759_553206_-	DNA-binding protein	NA	NA	NA	NA	NA
SQF83143.1|553560_554733_+	L-lactate dehydrogenase	NA	NA	NA	NA	NA
SQF83144.1|554797_555742_-|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
SQF83145.1|555753_556125_-	ribosome-binding factor A	NA	NA	NA	NA	NA
SQF83146.1|556289_557534_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	57.6	1.6e-130
