The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	38503	48891	2169668		Microbacterium_phage(16.67%)	7	NA	NA
SQF68093.1|38503_42229_+	phosphoribosyl formylglycin amidine synthase	NA	A6N228	Microbacterium_phage	25.6	2.9e-34
SQF68094.1|42322_43774_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.0	5.5e-58
SQF68095.1|43926_44955_+	phosphoribosylaminoimidazole synthetase	NA	A0A1D7SE90	Cyanophage	43.6	3.7e-64
SQF68096.1|44947_45502_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	34.1	3.8e-23
SQF68097.1|45608_46121_+	vanZ protein	NA	NA	NA	NA	NA
SQF68098.1|46139_47684_+	IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	48.7	1.6e-76
SQF68099.1|47763_48891_-	autolysin	NA	F8HGP2	Streptococcus_phage	28.6	9.1e-08
>prophage 2
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	433939	443503	2169668		Streptococcus_phage(81.82%)	14	NA	NA
SQF68474.1|433939_434704_+	branched-chain amino acid ABC transporter ATP binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	7.2e-17
SQF68475.1|434703_435414_+	branched-chain amino acid ABC transporter ATPase	NA	G9BWD6	Planktothrix_phage	28.4	3.0e-17
SQF68476.1|435458_436121_+	5'-AMP-activated protein kinase subunit gamma-3	NA	M1NSC5	Streptococcus_phage	57.4	1.2e-60
SQF68477.1|436207_436843_+	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	66.3	1.8e-69
SQF68478.1|436858_437731_+	DNA polymerase III subunit delta	NA	M1NSC1	Streptococcus_phage	41.4	7.7e-55
SQF68479.1|437727_438528_+	stage 0 sporulation protein	NA	NA	NA	NA	NA
SQF68480.1|438520_438844_+	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	64.2	7.0e-30
SQF68481.1|438848_439712_+	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	76.0	5.9e-116
SQF68482.1|439738_440131_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF68483.1|440177_440807_-	copper homeostasis protein	NA	NA	NA	NA	NA
SQF68484.1|440923_442015_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	63.4	3.7e-131
SQF68485.1|442040_442592_+	acetyl transferase GNAT family	NA	M1PSC3	Streptococcus_phage	53.6	3.0e-49
SQF68486.1|442652_443150_+	methylated-DNA-protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	52.9	1.4e-40
SQF68487.1|443146_443503_+	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.0	6.3e-40
>prophage 3
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	451375	564819	2169668	transposase,portal,capsid,bacteriocin,terminase,tRNA,protease,tail	Streptococcus_phage(55.41%)	142	NA	NA
SQF68496.1|451375_452743_+|protease	interleukin-8 protease	protease	NA	NA	NA	NA
SQF68497.1|452693_454124_+	cell envelope proteinase A	NA	NA	NA	NA	NA
SQF68498.1|454149_456126_+	cell envelope proteinase A	NA	NA	NA	NA	NA
SQF68499.1|456338_458006_+	cell shape-determining protein	NA	NA	NA	NA	NA
SQF68500.1|458287_458995_+	permease	NA	NA	NA	NA	NA
SQF68501.1|459262_461260_+|tRNA	methionyl-tRNA synthetase	tRNA	A0A1V0SHR2	Klosneuvirus	35.2	1.7e-86
SQF68502.1|461792_462806_+	ribonucleotide-diphosphate reductase subunit beta	NA	R4TBI6	Mycobacterium_phage	53.4	2.9e-98
SQF68503.1|462809_463283_+	ribonucleotide reductase stimulatory protein	NA	F8WQ19	Bacillus_phage	37.8	3.7e-11
SQF68504.1|463266_465453_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A8E2R1	Enterococcus_phage	43.1	2.9e-167
SQF68505.1|465750_467085_+	branched-chain amino acid carrier protein	NA	NA	NA	NA	NA
SQF68506.1|467243_467345_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68507.1|467483_467837_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68508.1|468185_468422_+|tRNA	methionine--tRNA ligase	tRNA	NA	NA	NA	NA
SQF68509.1|468414_469113_+	3-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
SQF68510.1|469109_469352_+	group-specific protein	NA	NA	NA	NA	NA
SQF68511.1|469369_469819_+	cytoplasmic protein	NA	NA	NA	NA	NA
SQF68512.1|469820_470780_+	trans-1,2-dihydrobenzene-1,2-diol dehydrogenase	NA	NA	NA	NA	NA
SQF68513.1|471113_472451_+	phosphoglycerate transporter protein	NA	NA	NA	NA	NA
SQF68514.1|472622_474005_+	N-acetylglucosamine-1-phosphate uridyltransferase	NA	A0A2K9L4K9	Tupanvirus	35.6	1.6e-30
SQF68515.1|474035_474590_+	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
SQF68516.1|474590_474842_+	membrane protein	NA	NA	NA	NA	NA
SQF68517.1|474859_475555_+	5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase	NA	NA	NA	NA	NA
SQF68518.1|475627_476275_-	iron-dependent repressor	NA	NA	NA	NA	NA
SQF68519.1|476420_477353_+	manganese-binding protein	NA	NA	NA	NA	NA
SQF68520.1|477417_478143_+	manganese transport system ATP-binding protein	NA	A0A1V0SE00	Indivirus	31.3	4.8e-18
SQF68521.1|478143_478992_+	metal cation ABC transporter membrane protein	NA	NA	NA	NA	NA
SQF68522.1|479122_479929_-	peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	37.8	2.1e-22
SQF68523.1|480047_482555_+	cell division protein	NA	S5VNE3	Mycobacterium_phage	50.9	1.3e-86
SQF68524.1|482623_482977_-	integral membrane protein	NA	NA	NA	NA	NA
SQF68525.1|483219_483645_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQF68526.1|483750_484440_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQF68527.1|484762_485065_-	exported protein	NA	NA	NA	NA	NA
SQF68528.1|485332_486061_+	uridylate kinase	NA	NA	NA	NA	NA
SQF68529.1|486089_486647_+	ribosome recycling factor	NA	NA	NA	NA	NA
SQF68530.1|486755_487613_+	s1 RNA binding domain	NA	NA	NA	NA	NA
SQF68531.1|487685_488195_+	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SQF68532.1|488191_488407_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF68533.1|488545_489730_+	surface antigen	NA	A0A0E3XB61	Gordonia_phage	38.7	2.8e-15
SQF68534.1|490040_491813_+	myosin-cross-reactive antigen	NA	NA	NA	NA	NA
SQF68535.1|491973_493035_+	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	48.6	3.2e-47
SQF68536.1|493081_493657_+	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA	NA
SQF68537.1|493815_494313_+|protease	metalloprotease	protease	NA	NA	NA	NA
SQF68538.1|494293_494701_+	diacylglycerol kinase	NA	NA	NA	NA	NA
SQF68539.1|494821_495718_+	GTP-binding protein Era	NA	NA	NA	NA	NA
SQF68540.1|495904_496084_+	phosphohydrolase	NA	NA	NA	NA	NA
SQF68541.1|496041_497448_-	ATP-binding cassette, subfamily C,bacterial	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.6	1.2e-14
SQF68542.1|497844_498708_+|transposase	transposase	transposase	NA	NA	NA	NA
SQF68543.1|498719_498947_+|bacteriocin	bacteriocin class II with double-glycine leader peptide	bacteriocin	NA	NA	NA	NA
SQF68544.1|498995_499313_+	role in replication	NA	NA	NA	NA	NA
SQF68545.1|499735_499960_+|bacteriocin	BlpM-like bacteriocin	bacteriocin	NA	NA	NA	NA
SQF68546.1|499973_500159_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68547.1|500394_500583_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68548.1|500601_500889_-|transposase	ISSdy1, transposase OrfB	transposase	A0A2I7SC85	Paenibacillus_phage	54.7	1.2e-25
SQF68549.1|500941_501364_-|transposase	ISSdy1, transposase OrfB	transposase	A0A0C5AEB1	Paenibacillus_phage	48.0	2.3e-25
SQF68550.1|501417_501636_-|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	52.9	5.8e-12
SQF68551.1|501954_502704_+	response regulator	NA	NA	NA	NA	NA
SQF68552.1|502704_504039_+	two-component system, AgrA family, sensor histidine kinase AgrC	NA	NA	NA	NA	NA
SQF68553.1|504099_504225_-	COMC family	NA	NA	NA	NA	NA
SQF68554.1|504315_505680_-	Transport protein comB	NA	NA	NA	NA	NA
SQF68555.1|505690_507844_-	Bacteriocin processing peptidase / Bacteriocin export ABC transporter	NA	W8CYL7	Bacillus_phage	28.3	5.7e-43
SQF68556.1|508130_508358_+	BlpM	NA	NA	NA	NA	NA
SQF68557.1|508370_508571_+	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF68558.1|508571_508781_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68559.1|508865_509060_+|bacteriocin	bacteriocin-associated protein	bacteriocin	NA	NA	NA	NA
SQF68560.1|509107_509389_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68561.1|509582_509993_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68562.1|511149_511914_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68563.1|511989_513018_-	SLH, S-layer homology domain W	NA	NA	NA	NA	NA
SQF68564.1|513199_514099_+	transcriptional regulator	NA	NA	NA	NA	NA
SQF68565.1|514280_515108_+	formamido pyrimidine-DNA glycosylase	NA	G3MA33	Bacillus_virus	32.7	8.4e-27
SQF68566.1|515077_515698_+	dephospho-CoA kinase	NA	NA	NA	NA	NA
SQF68567.1|516158_516860_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	34.1	1.1e-24
SQF68568.1|516849_518487_+	ABC transporter, ATP binding protein	NA	NA	NA	NA	NA
SQF68569.1|518596_520099_+	ATPase	NA	A0A248XCZ8	Klebsiella_phage	44.1	3.2e-77
SQF68570.1|520312_521401_-	DNA integration/recombination/invertion protein	NA	Q938N9	Temperate_phage	74.0	1.2e-153
SQF68571.1|521577_521883_-	phage membrane protein	NA	NA	NA	NA	NA
SQF68572.1|521892_522657_-	phage repressor protein	NA	E8ZDN4	Streptococcus_phage	64.5	1.4e-84
SQF68573.1|522820_522922_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68574.1|523015_523153_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68575.1|523132_523513_-	Uncharacterised protein	NA	A0A1S5SCT1	Streptococcus_phage	55.9	2.5e-34
SQF68576.1|523571_523730_+	Uncharacterised protein	NA	J7KH24	Streptococcus_phage	90.4	9.9e-22
SQF68577.1|523908_524757_-	phage protein	NA	A0A1S5SAN8	Streptococcus_phage	29.7	7.8e-20
SQF68578.1|524813_525002_+	putative cro protein	NA	A0A0B5A7F0	Streptococcus_phage	66.7	1.1e-14
SQF68579.1|525035_525281_+	phage protein	NA	A0A097PAP6	Streptococcus_pyogenes_phage	93.8	1.6e-34
SQF68580.1|525239_525449_-	phage protein	NA	NA	NA	NA	NA
SQF68581.1|525504_525846_+	phage protein	NA	NA	NA	NA	NA
SQF68582.1|525803_526025_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68583.1|526431_526689_+	phage protein	NA	NA	NA	NA	NA
SQF68584.1|526718_526859_+	phage protein	NA	A0A097PAR2	Streptococcus_pyogenes_phage	100.0	6.5e-17
SQF68585.1|526839_527052_+	phage protein	NA	NA	NA	NA	NA
SQF68586.1|527039_527222_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68587.1|527331_527643_+	phage protein	NA	A0A1S5PRW6	Streptococcus_phage	47.5	8.8e-22
SQF68588.1|527629_528322_+	phage protein	NA	J7KC09	Streptococcus_phage	97.0	4.1e-128
SQF68589.1|528423_529653_+	phage DNA/RNA helicase	NA	A0A1P8VVM2	Streptococcus_phage	96.1	1.7e-230
SQF68590.1|529668_530127_+	phage protein	NA	A0A1P8VVN0	Streptococcus_phage	100.0	3.8e-82
SQF68591.1|530129_530942_+	phage protein	NA	A0A1P8VVM6	Streptococcus_phage	99.6	5.5e-156
SQF68592.1|530931_532413_+	DNA primase	NA	A0A1P8VVM0	Streptococcus_phage	97.2	2.2e-288
SQF68593.1|532657_532978_+	phage protein	NA	A0A1P8VVL5	Streptococcus_phage	98.1	1.3e-52
SQF68594.1|532961_533318_+	phage protein	NA	A0A1P8VVP9	Streptococcus_phage	85.6	2.5e-52
SQF68595.1|533314_533563_+	phage protein	NA	Q938M4	Temperate_phage	84.0	4.4e-32
SQF68596.1|533559_533841_+	phage protein	NA	J7KDH9	Streptococcus_phage	77.3	3.4e-33
SQF68597.1|533830_534022_+	phage protein	NA	A3F626	Streptococcus_phage	92.1	1.5e-11
SQF68598.1|534018_534291_+	phage membrane protein	NA	A7J287	Streptococcus_phage	60.0	5.5e-20
SQF68599.1|534280_534643_+|terminase	phage terminase	terminase	Q7Y4J8	Streptococcus_phage	70.3	2.6e-41
SQF68600.1|534647_535397_+	Adenine-specific methyltransferase	NA	Q9MCL7	Streptococcus_virus	90.7	2.3e-132
SQF68601.1|535444_536032_+	Protein of uncharacterised function (DUF1642)	NA	A3F631	Streptococcus_phage	52.7	1.3e-26
SQF68602.1|536028_536343_+	phage protein	NA	NA	NA	NA	NA
SQF68603.1|536385_536823_+	phage protein	NA	A0A097PBF1	Streptococcus_pyogenes_phage	99.3	1.4e-76
SQF68604.1|537403_537532_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68605.1|537572_537911_+	Phage endonuclease	NA	J7KH36	Streptococcus_phage	97.2	2.4e-57
SQF68606.1|538081_538549_+|terminase	phage terminase, small subunit	terminase	J7KC46	Streptococcus_phage	99.4	2.3e-82
SQF68607.1|538563_538884_+|terminase	phage terminase, large subunit	terminase	J7KKD1	Streptococcus_phage	97.1	1.7e-52
SQF68608.1|538856_540317_+|terminase	phage terminase, large subunit	terminase	J7KKD1	Streptococcus_phage	97.7	2.7e-278
SQF68609.1|540313_540484_+	phage protein	NA	J7KK43	Streptococcus_phage	62.5	3.9e-08
SQF68610.1|540476_540743_+	phage protein	NA	A0A097PAR8	Streptococcus_pyogenes_phage	79.5	7.5e-30
SQF68611.1|540776_541997_+|portal	phage portal protein	portal	J7KDU3	Streptococcus_phage	82.4	4.0e-187
SQF68612.1|541974_542640_+|protease	phage ClpP protease	protease	M1Q115	Streptococcus_phage	78.1	2.3e-91
SQF68613.1|542676_543864_+|capsid	phage major capsid protein	capsid	J7KJ82	Streptococcus_phage	64.0	5.8e-138
SQF68614.1|543997_544288_+	phage protein	NA	J7KC36	Streptococcus_phage	81.7	2.6e-36
SQF68615.1|544284_544632_+	phage protein	NA	J7KJ42	Streptococcus_phage	83.6	6.8e-47
SQF68616.1|544628_545006_+	phage protein	NA	J7KDM3	Streptococcus_phage	75.2	2.5e-47
SQF68617.1|545002_545428_+	phage protein	NA	J7KBZ9	Streptococcus_phage	85.8	2.0e-69
SQF68618.1|545443_546034_+|tail	major tail protein	tail	J7KKC8	Streptococcus_phage	82.1	1.1e-84
SQF68619.1|546084_546411_+	phage protein	NA	J7KK85	Streptococcus_phage	75.9	1.1e-38
SQF68620.1|546620_550544_+|tail	phage tail protein	tail	J7KDT4	Streptococcus_phage	53.3	1.2e-248
SQF68621.1|550543_551251_+	phage protein	NA	Q938K2	Temperate_phage	70.6	5.2e-94
SQF68622.1|551247_553395_+	Phage endopeptidase	NA	Q938K1	Temperate_phage	92.1	0.0e+00
SQF68623.1|553391_554447_+	hyaluronoglucosaminidase	NA	A3F657	Streptococcus_phage	82.1	2.6e-129
SQF68624.1|554446_555082_+	phage protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	72.6	1.3e-83
SQF68625.1|555092_557000_+	gp58-like family protein	NA	Q938J9	Temperate_phage	62.5	3.0e-152
SQF68626.1|557008_557170_+	phage protein	NA	NA	NA	NA	NA
SQF68627.1|557172_557784_+	phage protein	NA	A7J2B1	Streptococcus_phage	90.1	2.6e-81
SQF68628.1|557793_558090_+	phage protein	NA	Q938J6	Temperate_phage	98.0	6.4e-46
SQF68629.1|558086_558272_+	phage protein	NA	Q938J5	Temperate_phage	93.4	9.5e-24
SQF68630.1|558275_558386_+	phage membrane protein	NA	A7J2B4	Streptococcus_phage	91.7	3.9e-09
SQF68631.1|558382_559579_+	mannosyl-glycoendo-beta-N-acetylglucosaminidase family protein	NA	A7J2B5	Streptococcus_phage	81.5	1.8e-195
SQF68632.1|559715_560258_+	phage protein	NA	Q938J3	Temperate_phage	49.4	5.4e-43
SQF68633.1|560261_561098_+	hypothetical phage membrane protein	NA	Q938J2	Temperate_phage	47.7	6.2e-54
SQF68634.1|561160_562144_-	Sdn	NA	A7J2B8	Streptococcus_phage	97.7	9.2e-166
SQF68635.1|562382_562565_+	phage protein	NA	A3F673	Streptococcus_phage	83.3	1.5e-21
SQF68636.1|562754_563576_+	gamma-glutamyl kinase	NA	A0A1X9I5D0	Streptococcus_phage	36.8	4.7e-38
SQF68637.1|563568_564819_+	gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	55.6	2.9e-116
>prophage 4
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	863599	922733	2169668	tRNA,transposase	Streptococcus_phage(21.05%)	60	NA	NA
SQF68899.1|863599_864961_+|tRNA	tRNA (uracil-5-)-methyltransferase	tRNA	F5CA72	Streptococcus_phi-m46.1-like_phage	89.6	7.1e-233
SQF68900.1|865171_865345_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68901.1|865341_866166_+	41 kDa protein	NA	A0A286QNA4	Streptococcus_phage	35.5	8.4e-11
SQF68902.1|866167_866263_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68903.1|866323_867070_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SFF5	Streptococcus_phage	70.0	9.7e-91
SQF68904.1|867110_867890_-|transposase	transposase for insertion sequence element IS629	transposase	A0A2I7SC85	Paenibacillus_phage	50.0	2.0e-67
SQF68905.1|867925_868216_-	Mobile element protein	NA	A0A0C5AJ30	Paenibacillus_phage	52.8	2.9e-19
SQF68906.1|868295_868769_+	DNA (cytosine-5-)-methyltransferase	NA	A0A1S5SFL7	Streptococcus_phage	45.1	1.2e-25
SQF68907.1|868814_869618_-	Mobile element protein	NA	Q8W6R2	Burkholderia_virus	27.7	1.9e-15
SQF68908.1|869665_869941_-|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	43.5	1.3e-13
SQF68909.1|870022_871417_+	relaxase	NA	NA	NA	NA	NA
SQF68910.1|871459_872329_-	transcriptional regulator PlcR	NA	NA	NA	NA	NA
SQF68911.1|872535_872688_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68912.1|872733_873426_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68913.1|873523_875305_+	ABC transporter ATP-binding protein/peptidase	NA	F2Y2R6	Organic_Lake_phycodnavirus	31.5	1.4e-23
SQF68914.1|875328_876708_+	ABC transporter ATPase	NA	Q6DMX7	Streptococcus_phage	30.9	6.0e-46
SQF68915.1|876798_877578_-|transposase	transposase for insertion sequence element IS629	transposase	A0A2I7SC85	Paenibacillus_phage	50.0	1.2e-67
SQF68916.1|877613_877904_-|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	56.2	2.6e-20
SQF68917.1|878482_879322_+	YaeC family protein	NA	NA	NA	NA	NA
SQF68918.1|879468_880263_+	phosphorylase, Pnp/UDP family	NA	F5CA76	Streptococcus_phi-m46.1-like_phage	83.5	1.0e-77
SQF68919.1|880344_880737_+	thioesterase	NA	NA	NA	NA	NA
SQF68920.1|880940_881597_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.9	3.5e-20
SQF68921.1|881593_882364_+	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
SQF68922.1|882440_883925_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF68923.1|884297_885518_+	MFS superfamily transporter	NA	NA	NA	NA	NA
SQF68924.1|885616_885982_-	thioesterase superfamily protein	NA	NA	NA	NA	NA
SQF68925.1|886097_886829_+	ribosomal small subunit pseudouridine synthaseA	NA	NA	NA	NA	NA
SQF68926.1|886879_887812_-	Zinc transport protein zntB	NA	NA	NA	NA	NA
SQF68927.1|887798_888662_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF68928.1|888826_890068_-	aminopeptidase	NA	NA	NA	NA	NA
SQF68929.1|890244_890373_+	membrane protein	NA	NA	NA	NA	NA
SQF68930.1|890427_891741_+	GTPase ObgE	NA	NA	NA	NA	NA
SQF68931.1|891809_891968_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF68932.1|891964_892426_-	nicotinamide mononucleotide transporter	NA	NA	NA	NA	NA
SQF68933.1|892741_894142_+	beta-glucosidase	NA	A0A0B5JD41	Pandoravirus	28.9	4.8e-43
SQF68934.1|894150_895245_+	outer surface protein	NA	NA	NA	NA	NA
SQF68935.1|895349_897344_+	PTS system mannitol (cryptic)-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQF68936.1|897366_897678_+	PTS system cellobiose-specific component IIB	NA	NA	NA	NA	NA
SQF68937.1|897680_898016_+	PTS system cellobiose-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQF68938.1|898012_898387_+	Domain of uncharacterised function (DUF3284)	NA	NA	NA	NA	NA
SQF68939.1|898638_900018_+	PTS system cellobiose-specific transporter subunit IIC	NA	NA	NA	NA	NA
SQF68940.1|900014_900167_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF68941.1|900314_901055_-	glutamine transport ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	42.4	3.3e-35
SQF68942.1|901054_903232_-	glutamine-binding protein/glutamine transpor tsystem permease protein	NA	NA	NA	NA	NA
SQF68943.1|903418_905410_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
SQF68944.1|905662_905806_+	D-alanyl-lipoteichoic acid biosynthesis protein DltX	NA	NA	NA	NA	NA
SQF68945.1|905817_907356_+	D-alanine--poly(phosphoribitol) ligase subunit 1	NA	A0A2K9KZV5	Tupanvirus	28.1	4.5e-42
SQF68946.1|907352_908609_+	Protein dltB	NA	A0A125RNP0	Pseudomonas_phage	28.5	3.0e-20
SQF68947.1|908626_908866_+	D-alanine-poly(phosphoribitol) ligase subunit 2	NA	NA	NA	NA	NA
SQF68948.1|908858_910115_+	Protein dltD	NA	NA	NA	NA	NA
SQF68949.1|910517_911771_+	maltose/maltodextrin-binding protein	NA	NA	NA	NA	NA
SQF68950.1|911935_913639_+	neopullulanase	NA	NA	NA	NA	NA
SQF68951.1|913761_915066_+	binding--dependent transport system inner membrane component family protein	NA	NA	NA	NA	NA
SQF68952.1|915065_915926_+	maltodextrin transport system permease	NA	NA	NA	NA	NA
SQF68953.1|915947_916775_+	Maltodextrose utilization protein malA	NA	NA	NA	NA	NA
SQF68954.1|916847_917645_-	Transcriptional regulator, LacI family	NA	NA	NA	NA	NA
SQF68955.1|917817_918654_-	maltose transport system permease	NA	NA	NA	NA	NA
SQF68956.1|918653_920015_-	maltose/maltodextrin ABC transport system permease	NA	NA	NA	NA	NA
SQF68957.1|920295_921549_-	maltose/maltodextrin-binding protein precursor	NA	NA	NA	NA	NA
SQF68958.1|921704_922733_-|transposase	transposase	transposase	H7BUM7	unidentified_phage	32.7	4.8e-40
>prophage 5
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	1029411	1082564	2169668	transposase,tRNA	Streptococcus_phage(28.57%)	49	NA	NA
SQF69069.1|1029411_1029927_+|transposase	transposase IS861 orfA	transposase	NA	NA	NA	NA
SQF69070.1|1029962_1030760_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	50.6	2.7e-59
SQF69071.1|1030938_1032393_+	amidase	NA	NA	NA	NA	NA
SQF69072.1|1032511_1033375_+	cystine-binding protein	NA	NA	NA	NA	NA
SQF69073.1|1033403_1034054_+	amino-acid ABC transporter permease yckA	NA	NA	NA	NA	NA
SQF69074.1|1034186_1034840_+	uracil-DNA glycosylase	NA	A0A0N9QWR4	Chrysochromulina_ericina_virus	39.0	2.8e-33
SQF69075.1|1034963_1036235_+	dihydroorotase	NA	NA	NA	NA	NA
SQF69076.1|1036294_1036930_-	glycerol-3-phosphate acyltransferase PlsY	NA	NA	NA	NA	NA
SQF69077.1|1037070_1039020_+	topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.7	1.2e-121
SQF69078.1|1039086_1039905_+	phosphate ABC transporter ATPase	NA	NA	NA	NA	NA
SQF69079.1|1040138_1042562_+	topoisomerase IV subunit	NA	G3M9Z5	Bacillus_virus	32.9	3.2e-95
SQF69080.1|1042684_1043707_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SQF69081.1|1043770_1044001_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SQF69082.1|1044389_1045595_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
SQF69083.1|1045900_1047361_+|transposase	ISSag8, transposase	transposase	A0A1X9I5T2	Streptococcus_phage	91.5	3.2e-255
SQF69084.1|1047455_1048076_-	phage protein	NA	NA	NA	NA	NA
SQF69085.1|1048816_1049431_+	membrane protein	NA	M1Q152	Streptococcus_phage	55.4	8.6e-53
SQF69086.1|1049566_1050355_-	ABC transporter permease	NA	NA	NA	NA	NA
SQF69087.1|1050364_1051063_-	Sulfate/thiosulfate import ATP-binding protein cysA	NA	A0A2H4PQG7	Staphylococcus_phage	27.7	3.7e-20
SQF69088.1|1051062_1051434_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQF69089.1|1051620_1054731_+	DNA polymerase III	NA	A0A2L1IZ23	Streptomyces_phage	29.3	3.4e-121
SQF69090.1|1054810_1055824_+	6-phosphofructokinase	NA	NA	NA	NA	NA
SQF69091.1|1055886_1057389_+	pyruvate kinase	NA	NA	NA	NA	NA
SQF69092.1|1057554_1058112_+	signal peptidase I	NA	NA	NA	NA	NA
SQF69093.1|1058295_1060110_+	glucosamine-fructose-6-phosphate aminotransferase	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	38.5	3.1e-98
SQF69094.1|1060308_1060644_+	phosphonoacetate hydrolase	NA	NA	NA	NA	NA
SQF69095.1|1060750_1061392_+	histidine transporter permease	NA	NA	NA	NA	NA
SQF69096.1|1061401_1062031_+	histidine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.5	1.3e-27
SQF69097.1|1062046_1062886_+	Membrane-bound lytic murein transglycosylase F	NA	NA	NA	NA	NA
SQF69098.1|1063117_1063630_+|transposase	truncated transposase	transposase	A0A1X9I5T2	Streptococcus_phage	95.7	3.6e-89
SQF69099.1|1063626_1064277_+|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	90.2	2.5e-103
SQF69100.1|1064312_1065548_-	cobalt-zinc-cadmium resistance protein	NA	NA	NA	NA	NA
SQF69101.1|1065653_1066991_-	amino acid symporter	NA	NA	NA	NA	NA
SQF69102.1|1067511_1069830_+	DNA helicase II / ATP-dependent DNA helicase PcrA	NA	A7KV33	Bacillus_phage	42.2	8.4e-133
SQF69103.1|1070192_1070441_+	transglycosylase associated family protein	NA	NA	NA	NA	NA
SQF69104.1|1070501_1071089_+	membrane protein	NA	NA	NA	NA	NA
SQF69105.1|1071099_1071288_+	membrane protein	NA	NA	NA	NA	NA
SQF69106.1|1071300_1071840_+	response regulator	NA	NA	NA	NA	NA
SQF69107.1|1071880_1072081_+	csbD-like family protein	NA	NA	NA	NA	NA
SQF69108.1|1072091_1072580_+	general stress protein, Gls24 family	NA	NA	NA	NA	NA
SQF69109.1|1072739_1073381_+	transcriptional regulator	NA	NA	NA	NA	NA
SQF69110.1|1073497_1074049_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
SQF69111.1|1074168_1074870_+	putative ABC transporter, ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	1.5e-37
SQF69112.1|1074879_1077525_+	ABC transporter permease	NA	NA	NA	NA	NA
SQF69113.1|1077605_1078202_+	type I restriction-modification system specificty subunit	NA	NA	NA	NA	NA
SQF69114.1|1078212_1079169_+	integral membrane protein	NA	NA	NA	NA	NA
SQF69115.1|1079265_1080606_+	Serine/threonine-protein kinase MRCK beta	NA	NA	NA	NA	NA
SQF69116.1|1080721_1081606_+|tRNA	tRNA pseudouridine synthase B	tRNA	NA	NA	NA	NA
SQF69117.1|1081700_1082564_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 6
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	1117717	1143878	2169668	transposase	Paenibacillus_phage(22.22%)	31	NA	NA
SQF69154.1|1117717_1117993_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	43.5	1.3e-13
SQF69155.1|1118476_1118767_+|transposase	transposase	transposase	A0A0C5AJ30	Paenibacillus_phage	56.2	2.6e-20
SQF69156.1|1118884_1119172_+|transposase	ISSdy1, transposase OrfB	transposase	A0A2I7SC85	Paenibacillus_phage	57.6	1.2e-25
SQF69157.1|1119250_1120210_+	C5a peptidase	NA	NA	NA	NA	NA
SQF69158.1|1120606_1122184_+	cardiolipin synthetase	NA	NA	NA	NA	NA
SQF69159.1|1122471_1123548_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
SQF69160.1|1123688_1124027_+	ATP-binding protein	NA	A0A248SK58	Salicola_phage	35.6	1.6e-05
SQF69161.1|1124086_1125352_-	Putative transcriptional regulator/aminotransferase	NA	A0A1X9I5H2	Streptococcus_phage	47.8	1.3e-103
SQF69162.1|1125441_1126290_+	pyridoxamine kinase	NA	NA	NA	NA	NA
SQF69163.1|1126286_1126847_+	membrane protein	NA	NA	NA	NA	NA
SQF69164.1|1127054_1127189_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69165.1|1127197_1127614_+	streptokinase	NA	NA	NA	NA	NA
SQF69166.1|1128135_1128315_+	streptokinase	NA	NA	NA	NA	NA
SQF69167.1|1128366_1129962_+	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	28.8	5.5e-51
SQF69168.1|1130290_1130497_+	CsbD-like protein	NA	NA	NA	NA	NA
SQF69169.1|1130505_1130625_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69170.1|1130633_1131083_+	Protein essC	NA	NA	NA	NA	NA
SQF69171.1|1131181_1132660_+|transposase	ISSag8, transposase	transposase	A0A1X9I5T2	Streptococcus_phage	91.0	2.3e-253
SQF69172.1|1132646_1133558_-	diacylglycerol kinase	NA	NA	NA	NA	NA
SQF69173.1|1133675_1134326_-	ADIPOR-like receptor CG5315	NA	NA	NA	NA	NA
SQF69174.1|1134322_1134763_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF69175.1|1135101_1135872_+	HTH-type transcriptional regulator rgg	NA	NA	NA	NA	NA
SQF69176.1|1136205_1136436_+	transporter, major facilitator family protein	NA	NA	NA	NA	NA
SQF69177.1|1137157_1138006_+	GTP-binding protein	NA	NA	NA	NA	NA
SQF69178.1|1137995_1138766_+	ribonuclease HII	NA	E3T5H8	Cafeteria_roenbergensis_virus	42.4	4.3e-25
SQF69179.1|1138871_1139714_+	DNA processing protein	NA	NA	NA	NA	NA
SQF69180.1|1139814_1141947_+	DNA topoisomerase I	NA	A0A1V0SCS0	Indivirus	35.3	1.2e-98
SQF69181.1|1142022_1142634_-	RuBisCO transcriptional regulator	NA	NA	NA	NA	NA
SQF69182.1|1142744_1142906_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQF69183.1|1143013_1143160_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF69184.1|1143248_1143878_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 7
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	1293100	1353816	2169668	transposase,protease,integrase	Streptococcus_phage(50.0%)	60	1284614:1284629	1310137:1310152
1284614:1284629	attL	TAGTAGTTAATTCCAA	NA	NA	NA	NA
SQF69338.1|1293100_1293376_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	43.5	1.3e-13
SQF69339.1|1293423_1294227_+	Mobile element protein	NA	Q8W6R2	Burkholderia_virus	28.0	2.7e-14
SQF69340.1|1294664_1295864_-|integrase	phage integrase family site specific recombinase	integrase	A0A1B0T6A8	Bacillus_phage	28.0	2.1e-26
SQF69341.1|1295886_1296114_-	Domain of uncharacterised function (DUF3173)	NA	NA	NA	NA	NA
SQF69342.1|1296392_1296617_-	Cro/CI family transcriptional regulator	NA	X5JA02	Clostridium_phage	45.9	4.4e-07
SQF69343.1|1296797_1298663_-	Tn5252, relaxase	NA	NA	NA	NA	NA
SQF69344.1|1298649_1299015_-	Tn5252, ORF 9 protein	NA	NA	NA	NA	NA
SQF69345.1|1299021_1299384_-	Tn5252, ORF 10 protein	NA	NA	NA	NA	NA
SQF69346.1|1299706_1299877_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69347.1|1299804_1301127_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	55.4	1.0e-135
SQF69348.1|1301286_1302927_-	mercuric reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.8	3.7e-50
SQF69349.1|1302955_1303348_-	mercuric resistance operon regulatory protein MerR	NA	NA	NA	NA	NA
SQF69350.1|1303672_1304323_+|integrase	integrase catalytic subunit	integrase	A0A0C5AEA5	Paenibacillus_phage	34.5	1.8e-16
SQF69351.1|1304597_1306727_-	cation transporter E1-E2 family ATPase	NA	E4ZFI9	Streptococcus_phage	100.0	0.0e+00
SQF69352.1|1306719_1307088_-	cadmium efflux system accessory protein	NA	E4ZFI8	Streptococcus_phage	100.0	1.4e-63
SQF69353.1|1307290_1307590_+	Uncharacterised protein	NA	Q6DMX6	Streptococcus_phage	96.0	5.3e-48
SQF69354.1|1307643_1308432_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69355.1|1308440_1309037_+	integral membrane protein	NA	NA	NA	NA	NA
SQF69356.1|1309210_1311298_-	lead, cadmium, zinc and mercury transporting ATPase	NA	E4ZFI9	Streptococcus_phage	29.0	6.7e-57
1310137:1310152	attR	TAGTAGTTAATTCCAA	NA	NA	NA	NA
SQF69357.1|1311436_1311643_-	putative copper-chaperone/transport protein	NA	NA	NA	NA	NA
SQF69358.1|1311790_1312267_-	cation-transporting ATP-ase, P-type	NA	A0A218MNH6	uncultured_virus	48.1	1.3e-27
SQF69359.1|1312253_1312700_-	transcriptional repressor CopY	NA	NA	NA	NA	NA
SQF69360.1|1313124_1313745_-	Cad superfamily protein	NA	NA	NA	NA	NA
SQF69361.1|1314284_1314743_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69362.1|1314776_1315103_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69363.1|1315286_1315979_+	repressor protein	NA	Q6DMX1	Streptococcus_phage	66.4	9.0e-83
SQF69364.1|1315981_1316116_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69365.1|1316121_1317537_+	ImpB/MucB/SamB family protein	NA	Q6DMX4	Streptococcus_phage	72.8	1.4e-199
SQF69366.1|1317533_1317884_+	Uncharacterised protein	NA	A0A1B0RXA8	Streptococcus_phage	55.7	2.4e-28
SQF69367.1|1317870_1318179_+	Uncharacterised protein	NA	E4ZFJ0	Streptococcus_phage	55.9	2.2e-25
SQF69368.1|1318187_1318484_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69369.1|1318533_1318923_-	glutamate-cysteine ligase	NA	NA	NA	NA	NA
SQF69370.1|1318919_1319147_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69371.1|1319200_1320277_-	DNA primase (type)	NA	NA	NA	NA	NA
SQF69372.1|1320315_1320954_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69373.1|1321049_1321340_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69374.1|1321353_1321653_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69375.1|1321723_1328548_-	SNF2 family protein	NA	A0A248SL14	Klebsiella_phage	31.4	5.0e-218
SQF69376.1|1328596_1329148_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69377.1|1329131_1329323_-	calcium-binding protein, putative	NA	NA	NA	NA	NA
SQF69378.1|1329323_1334219_-	agglutinin receptor	NA	NA	NA	NA	NA
SQF69379.1|1334497_1335088_+	abortive infection protein AbiGI	NA	NA	NA	NA	NA
SQF69380.1|1335084_1335930_+	Abortive infection protein AbiGII	NA	NA	NA	NA	NA
SQF69381.1|1336015_1338817_-	CHAP protein	NA	NA	NA	NA	NA
SQF69382.1|1338818_1341170_-	Tn5252 Orf26	NA	NA	NA	NA	NA
SQF69383.1|1341126_1341480_-	PrgI family protein	NA	NA	NA	NA	NA
SQF69384.1|1341541_1342396_-	Tn5252, Orf23	NA	NA	NA	NA	NA
SQF69385.1|1342414_1342657_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69386.1|1342674_1344492_-	conjugal transfer coupling protein TraG	NA	NA	NA	NA	NA
SQF69387.1|1344491_1344980_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69388.1|1345056_1345641_-|protease	CAAX amino terminal protease self- immunity	protease	NA	NA	NA	NA
SQF69389.1|1345643_1345877_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69390.1|1345885_1346269_-	arsenate reductase	NA	NA	NA	NA	NA
SQF69391.1|1346279_1346708_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69392.1|1346691_1348047_-	DNA-cytosine methyltransferase	NA	A0A141E1L1	Streptococcus_phage	55.9	6.8e-127
SQF69393.1|1348098_1348194_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69394.1|1348195_1349014_-	Replication initiator protein A (RepA) N-terminus	NA	A0A286QNA4	Streptococcus_phage	36.6	2.2e-11
SQF69395.1|1349010_1349184_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69396.1|1349812_1350313_-	50S ribosomal protein L10	NA	NA	NA	NA	NA
SQF69397.1|1351716_1353816_+|protease	ATP-dependent protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	38.8	2.8e-119
>prophage 8
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	1527624	1586786	2169668	transposase,tRNA	Streptococcus_phage(25.0%)	56	NA	NA
SQF69552.1|1527624_1528617_-|transposase	transposase	transposase	H7BVY4	unidentified_phage	31.6	1.1e-33
SQF69553.1|1528828_1529143_+	50S ribosomal protein L31	NA	NA	NA	NA	NA
SQF69554.1|1529353_1529758_-	PTS system mannose/fructose EIIAB component	NA	NA	NA	NA	NA
SQF69555.1|1529757_1530573_-	PTS system, mannose/fructose/N -acetylgalactosamine-specific component IID	NA	NA	NA	NA	NA
SQF69556.1|1530559_1531462_-	PTS system mannose/fructose permease IIC component	NA	NA	NA	NA	NA
SQF69557.1|1531504_1531990_-	PTS system mannose/fructose transporter subunit IIB	NA	NA	NA	NA	NA
SQF69558.1|1531986_1533771_-	beta-galactosidase	NA	NA	NA	NA	NA
SQF69559.1|1533891_1534605_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQF69560.1|1534667_1535663_-	tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
SQF69561.1|1535672_1536851_-	tagatose-6-phosphate aldose/ketose isomerase	NA	NA	NA	NA	NA
SQF69562.1|1536870_1537593_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQF69563.1|1537750_1539298_-	high-affinity zinc uptake system protein	NA	NA	NA	NA	NA
SQF69564.1|1539448_1540846_-	dipeptidase	NA	NA	NA	NA	NA
SQF69565.1|1540978_1541890_-	sporulation Regulator WhiA C terminal domain-containing protein	NA	Q7AWZ3	Streptococcus_phage	63.7	3.8e-105
SQF69566.1|1541886_1542864_-	transporter	NA	A1IMD5	Streptococcus_phage	75.7	7.8e-141
SQF69567.1|1542860_1543751_-	P-loop ATPase protein family protein	NA	A0A0R8VB27	Thermobifida_phage	29.8	8.8e-06
SQF69568.1|1543883_1544627_-	membrane protein	NA	NA	NA	NA	NA
SQF69569.1|1544917_1546264_-|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A2P1EMB4	Moumouvirus	29.7	1.7e-53
SQF69570.1|1546301_1547498_-	aspartate aminotransferase	NA	NA	NA	NA	NA
SQF69571.1|1547779_1550242_-	ATP-dependent DNA helicase	NA	A0A1X9I5C8	Streptococcus_phage	48.7	7.9e-206
SQF69572.1|1550470_1551118_+	hydroxyacylglutathione hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	61.6	1.2e-73
SQF69573.1|1551240_1552170_-	putative cell division protein	NA	NA	NA	NA	NA
SQF69574.1|1552162_1552855_-	cell division ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.8	8.0e-31
SQF69575.1|1552898_1553882_-	peptide chain release factor 2	NA	NA	NA	NA	NA
SQF69576.1|1554100_1555222_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
SQF69577.1|1555479_1557393_-	putative fructose-1,6-bisphosphatase	NA	NA	NA	NA	NA
SQF69578.1|1557623_1558268_-	beta-phosphoglucomutase	NA	NA	NA	NA	NA
SQF69579.1|1558571_1558847_+|transposase	transposase	transposase	A0A1P8CWP5	Bacillus_phage	43.5	1.3e-13
SQF69580.1|1558894_1559698_+	Mobile element protein	NA	Q8W6R2	Burkholderia_virus	27.7	7.1e-15
SQF69581.1|1559885_1560761_+	phosphoesterase	NA	NA	NA	NA	NA
SQF69582.1|1560750_1561116_+	membrane protein	NA	NA	NA	NA	NA
SQF69583.1|1561148_1564352_-	hyaluronate lyase	NA	NA	NA	NA	NA
SQF69584.1|1564376_1565015_-	keto-hydroxyglutarate-aldolase	NA	NA	NA	NA	NA
SQF69585.1|1565019_1566021_-	2-dehydro-3-deoxygluconokinase	NA	NA	NA	NA	NA
SQF69586.1|1566049_1566691_-	galactose-6-phosphate isomerase	NA	NA	NA	NA	NA
SQF69587.1|1566715_1567510_-	gluconate 5-dehydrogenase	NA	NA	NA	NA	NA
SQF69588.1|1567845_1568283_+	PTS system N-acetylgalactosamine-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQF69589.1|1568282_1569482_+	unsaturated glucuronyl hydrolase	NA	NA	NA	NA	NA
SQF69590.1|1569517_1570006_+	PTS system protein	NA	NA	NA	NA	NA
SQF69591.1|1570024_1570807_+	PTS system N-acetylgalactosamine-specific transporter subunit IIC	NA	NA	NA	NA	NA
SQF69592.1|1570793_1571615_+	PTS system N-acetylgalactosamine-specific transporter subunit IID	NA	NA	NA	NA	NA
SQF69593.1|1571701_1573609_+	oligohyaluronate lyase	NA	NA	NA	NA	NA
SQF69594.1|1573672_1574668_+	transcriptional regulator	NA	NA	NA	NA	NA
SQF69595.1|1574811_1575228_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF69596.1|1575277_1577959_-	cation transporting ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	27.6	1.3e-68
SQF69597.1|1578287_1578695_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF69598.1|1578776_1580078_+	dGTP triphosphohydrolase	NA	E3T4P8	Cafeteria_roenbergensis_virus	28.5	8.8e-23
SQF69599.1|1580558_1581368_+	HAD superfamily hydrolase	NA	NA	NA	NA	NA
SQF69600.1|1581367_1582585_+	UDP-N-acetylmuramoylpentapeptide-lysine N(6)-alanyltransferase/UDP-N-acetylmuramoylpentapeptide- lysine N(6)-seryltransferase	NA	NA	NA	NA	NA
SQF69601.1|1582584_1583820_+	alanine adding enzyme	NA	NA	NA	NA	NA
SQF69602.1|1583958_1584117_+	L-lactate dehydrogenase (FMN-dependent) related alpha-hydroxy acid dehydrogenase	NA	NA	NA	NA	NA
SQF69603.1|1584170_1584461_+	Mobile element protein	NA	A0A0C5AJ30	Paenibacillus_phage	52.8	2.2e-19
SQF69604.1|1584496_1584937_+|transposase	ISSdy1, transposase OrfB	transposase	A0A0C5AEB1	Paenibacillus_phage	48.9	1.6e-29
SQF69605.1|1584878_1585208_+|transposase	ISSdy1, transposase OrfB	transposase	A0A2I7SC85	Paenibacillus_phage	51.5	1.2e-21
SQF69606.1|1585437_1585953_+|transposase	transposase IS861 orfA	transposase	NA	NA	NA	NA
SQF69607.1|1585988_1586786_+|transposase	transposase	transposase	A0A1B1P773	Bacillus_phage	50.6	7.2e-60
>prophage 9
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	1682932	1723542	2169668	terminase,portal,tail	Streptococcus_phage(82.22%)	53	NA	NA
SQF69707.1|1682932_1683115_-	phage protein	NA	A3F673	Streptococcus_phage	83.3	1.5e-21
SQF69708.1|1683353_1684154_+	streptodornase	NA	NA	NA	NA	NA
SQF69709.1|1684215_1684416_-	CsbD-like protein	NA	J7KJ36	Streptococcus_phage	83.3	1.8e-20
SQF69710.1|1684600_1685572_-	abortive infection phage resistance protein	NA	A0A059NT88	Lactococcus_phage	42.6	2.5e-75
SQF69711.1|1685862_1686615_-	phage-associated cell wall hydrolase	NA	A3F665	Streptococcus_phage	99.6	6.9e-145
SQF69712.1|1686620_1686728_-	phage membrane protein	NA	NA	NA	NA	NA
SQF69713.1|1686731_1686917_-	phage protein	NA	Q938J5	Temperate_phage	96.7	1.5e-24
SQF69714.1|1686913_1687249_-	Uncharacterised protein	NA	A3F663	Streptococcus_phage	100.0	2.8e-50
SQF69715.1|1687259_1687871_-	phage protein	NA	A3F662	Streptococcus_phage	93.7	7.2e-84
SQF69716.1|1687873_1688035_-	phage protein	NA	NA	NA	NA	NA
SQF69717.1|1688043_1689951_-	gp58-like family protein	NA	Q938J9	Temperate_phage	61.6	1.6e-142
SQF69718.1|1689961_1690597_-	phage protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	72.6	1.3e-83
SQF69719.1|1690596_1691652_-	hyaluronoglucosaminidase	NA	A3F657	Streptococcus_phage	82.1	2.6e-129
SQF69720.1|1691648_1693631_-	phage protein	NA	A7J2A7	Streptococcus_phage	94.8	0.0e+00
SQF69721.1|1693640_1694483_-	phage protein	NA	A7J2A6	Streptococcus_phage	100.0	2.2e-160
SQF69722.1|1694494_1698610_-|tail	phage minor tail protein	tail	A7J2A5	Streptococcus_phage	96.0	7.2e-236
SQF69723.1|1698624_1698858_-	phage protein	NA	A7J2A4	Streptococcus_phage	100.0	4.4e-34
SQF69724.1|1698932_1699388_-	phage protein	NA	A7J2A3	Streptococcus_phage	98.7	7.7e-75
SQF69725.1|1699441_1700041_-|tail	phage major tail protein	tail	A7J2A2	Streptococcus_phage	94.3	1.2e-86
SQF69726.1|1700052_1700412_-	phage protein	NA	A7J2A1	Streptococcus_phage	98.3	1.8e-58
SQF69727.1|1700415_1700760_-	phage protein	NA	A7J2A0	Streptococcus_phage	98.2	1.4e-55
SQF69728.1|1700756_1701035_-	phage protein	NA	A7J299	Streptococcus_phage	98.9	4.2e-47
SQF69729.1|1701045_1701402_-	phage protein	NA	A7J298	Streptococcus_phage	96.6	1.7e-56
SQF69730.1|1701413_1702301_-	phage protein	NA	A7J297	Streptococcus_phage	99.3	1.8e-160
SQF69731.1|1702313_1702883_-	phage protein	NA	A7J296	Streptococcus_phage	92.1	6.3e-74
SQF69732.1|1703129_1703399_-	phage protein	NA	Q938K9	Temperate_phage	84.1	2.8e-32
SQF69733.1|1703617_1705060_-	phage protein	NA	A7J293	Streptococcus_phage	90.4	7.5e-249
SQF69734.1|1705025_1706558_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	97.5	8.2e-286
SQF69735.1|1706572_1707850_-|terminase	terminase large subunit	terminase	A7J291	Streptococcus_phage	98.6	2.9e-244
SQF69736.1|1707839_1708292_-|terminase	phage terminase small subunit	terminase	A7J290	Streptococcus_phage	94.7	9.4e-73
SQF69737.1|1708381_1708798_-	phage protein	NA	A7J289	Streptococcus_phage	100.0	6.6e-73
SQF69738.1|1708794_1708986_-	phage protein	NA	NA	NA	NA	NA
SQF69739.1|1708975_1709134_-	DNA methylase family protein	NA	NA	NA	NA	NA
SQF69740.1|1709136_1709403_-	phage protein	NA	A7J287	Streptococcus_phage	60.7	1.5e-17
SQF69741.1|1709399_1709567_-	phage protein	NA	A7J285	Streptococcus_phage	94.5	1.9e-23
SQF69742.1|1709567_1710890_-	SNF2 family phage protein	NA	A7J284	Streptococcus_phage	97.5	4.6e-253
SQF69743.1|1710886_1711162_-	phage protein	NA	A7J283	Streptococcus_phage	98.9	4.5e-46
SQF69744.1|1711550_1713935_-	phage DNA primase/helicase protein	NA	A7J282	Streptococcus_phage	94.8	6.3e-277
SQF69745.1|1713939_1715862_-	phage DNA polymerase	NA	A7J280	Streptococcus_phage	98.6	0.0e+00
SQF69746.1|1715904_1716462_-	phage protein	NA	D2J040	Enterococcus_phage	57.9	7.3e-51
SQF69747.1|1716473_1717628_-	phage protein	NA	A7J278	Streptococcus_phage	93.0	3.1e-205
SQF69748.1|1717627_1717927_-	phage protein	NA	A7J277	Streptococcus_phage	99.0	2.3e-43
SQF69749.1|1718014_1718218_-	phage protein	NA	A7J276	Streptococcus_phage	94.0	1.2e-30
SQF69750.1|1718214_1718367_-	phage protein	NA	A7J275	Streptococcus_phage	86.0	1.7e-15
SQF69751.1|1718363_1718747_-	phage protein	NA	A7J274	Streptococcus_phage	94.5	4.5e-60
SQF69752.1|1718743_1718950_-	phage protein	NA	NA	NA	NA	NA
SQF69753.1|1718942_1719113_-	phage protein	NA	A7J273	Streptococcus_phage	92.9	9.0e-21
SQF69754.1|1719141_1719399_-	phage protein	NA	NA	NA	NA	NA
SQF69755.1|1719478_1720252_-	prophage antirepressor	NA	A0A1Q1PVU2	Staphylococcus_phage	52.7	7.7e-67
SQF69756.1|1720381_1720597_-	phage repressor	NA	E8ZDN3	Streptococcus_phage	80.3	2.5e-23
SQF69757.1|1720763_1721123_+	phage transcriptional repressor	NA	A0A1S5SAF1	Streptococcus_phage	62.0	5.4e-23
SQF69758.1|1721091_1722204_+	Domain of uncharacterised function (DUF955)	NA	NA	NA	NA	NA
SQF69759.1|1722453_1723542_+	DNA integration/recombination/invertion protein	NA	Q938N9	Temperate_phage	74.2	3.1e-154
>prophage 10
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	2037765	2049387	2169668		Streptococcus_phage(62.5%)	11	NA	NA
SQF70057.1|2037765_2040210_-	negative regulator of genetic competence	NA	A0A223W0B1	Agrobacterium_phage	36.3	1.3e-128
SQF70058.1|2040209_2040671_-	transcriptional regulator	NA	NA	NA	NA	NA
SQF70059.1|2041651_2042383_+	amidohydrolase 2	NA	NA	NA	NA	NA
SQF70060.1|2042323_2043799_-	Phage-associated cell wall hydrolase	NA	A0A1X9I5T2	Streptococcus_phage	90.6	2.5e-239
SQF70061.1|2043798_2044149_-	phage protein	NA	A0A141E1X5	Streptococcus_phage	84.2	3.1e-15
SQF70062.1|2044286_2044511_-	phage protein	NA	Q938K9	Temperate_phage	60.2	2.3e-16
SQF70063.1|2044563_2044983_-	GTP pyrophosphokinase	NA	A0A060QNR4	Streptococcus_phage	61.8	2.2e-39
SQF70064.1|2044979_2045186_-	phage protein	NA	A0A141E1X9	Streptococcus_phage	35.4	8.2e-08
SQF70065.1|2045187_2046432_-	phage Mu protein F like protein	NA	A0A1S5S801	Streptococcus_phage	37.2	3.2e-62
SQF70066.1|2047273_2047834_+	peroxiredoxin	NA	NA	NA	NA	NA
SQF70067.1|2047854_2049387_+	NADH dehydrogenase	NA	V9VEY6	Lactococcus_phage	29.1	4.4e-21
>prophage 11
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	2093649	2105150	2169668	tRNA	Streptococcus_phage(50.0%)	9	NA	NA
SQF70106.1|2093649_2096205_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	25.5	2.7e-39
SQF70107.1|2096191_2096545_-	cytoplasmic protein	NA	NA	NA	NA	NA
SQF70108.1|2096541_2096979_-	arginine repressor	NA	NA	NA	NA	NA
SQF70109.1|2097267_2098959_+|tRNA	arginyl-tRNA synthetase	tRNA	A0A2I2L3K1	Orpheovirus	32.4	6.4e-74
SQF70110.1|2099028_2100426_-	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	28.3	6.5e-48
SQF70111.1|2100603_2101518_-	transporter	NA	M1Q1P6	Streptococcus_phage	40.1	8.9e-54
SQF70112.1|2101547_2102447_-	hypothetical membrane spanning protein	NA	M1Q1P6	Streptococcus_phage	35.2	6.1e-47
SQF70113.1|2102467_2103409_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQF70114.1|2103401_2105150_-|tRNA	aspartyl-tRNA synthetase	tRNA	A0A1V0SJ84	Klosneuvirus	26.1	4.5e-14
>prophage 12
LS483363	Streptococcus dysgalactiae subsp. equisimilis strain NCTC9414 genome assembly, chromosome: 1	2169668	2125092	2136514	2169668		Streptococcus_phage(66.67%)	18	NA	NA
SQF70143.1|2125092_2125440_-	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	60.7	5.2e-31
SQF70144.1|2125620_2125794_-	phage protein	NA	NA	NA	NA	NA
SQF70145.1|2126080_2127694_-	bacteriophage resistance protein	NA	A0A1P8BMF9	Lactococcus_phage	52.9	1.2e-146
SQF70146.1|2127683_2128205_-	phage protein	NA	NA	NA	NA	NA
SQF70147.1|2128214_2128481_-	phage protein	NA	A0A1X9I6M4	Streptococcus_phage	47.1	2.4e-12
SQF70148.1|2128492_2128690_-	phage protein	NA	NA	NA	NA	NA
SQF70149.1|2128670_2128811_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF70150.1|2128807_2129140_-	phage protein	NA	NA	NA	NA	NA
SQF70151.1|2129348_2129591_-	Prophage antirepressor	NA	NA	NA	NA	NA
SQF70152.1|2129646_2130210_-	phage antirepressor protein	NA	A0A0A7S0G2	Clostridium_phage	47.1	3.3e-27
SQF70153.1|2130280_2130469_-	putative transcriptional regulator	NA	A0A1X9I5U7	Streptococcus_phage	39.3	7.7e-05
SQF70154.1|2130640_2131045_+	transcriptional regulator	NA	A0A286QRM9	Streptococcus_phage	47.8	1.3e-09
SQF70155.1|2131355_2131880_+	Telomeric repeat-binding factor 2	NA	A8ASM1	Listeria_phage	34.3	5.3e-11
SQF70156.1|2132124_2133288_+	tyrosine recombinase XerD	NA	A0A1X9I6A9	Streptococcus_phage	70.5	2.1e-161
SQF70157.1|2133444_2134056_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
SQF70158.1|2134244_2134712_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
SQF70159.1|2134864_2135137_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQF70160.1|2135152_2136514_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	63.0	1.1e-153
