assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_900475225.1_42685_C01	LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	1	216481-216574	1	CRISPRCasFinder	no		cas3,DEDDh,csa3,RT,DinG,csn2,cas2,cas1,cas9,WYL	Orphan	TGTTCTAAAATTCGAGTTGGCAATTAA	27	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,RT,DinG,csn2,cas2,cas1,cas9,WYL	NA,NA	NA|540aa|up_9|LS483366.1_207935_209555_+	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|282aa|up_8|LS483366.1_209639_210485_-	pfam14373, Imm_superinfect, Superinfection immunity protein	NA|102aa|up_7|LS483366.1_210574_210880_-	pfam10825, DUF2752, Protein of unknown function (DUF2752)	NA|111aa|up_6|LS483366.1_210879_211212_-	pfam05154, TM2, TM2 domain	NA|290aa|up_5|LS483366.1_211396_212266_-	COG0564, RluA, Pseudouridylate synthases, 23S RNA-specific [Translation, ribosomal structure and biogenesis]	NA|776aa|up_4|LS483366.1_212331_214659_+	TIGR02074, Includes:_Penicillin-insensitive_transglycosylase, penicillin-binding protein, 1A family	NA|51aa|up_3|LS483366.1_214707_214860_+	PRK00504, rpmG, 50S ribosomal protein L33; Validated	NA|59aa|up_2|LS483366.1_214868_215045_+	PRK07597, secE, preprotein translocase subunit SecE; Reviewed	NA|180aa|up_1|LS483366.1_215245_215785_+	PRK05609, nusG, transcription antitermination protein NusG; Validated	NA|162aa|up_0|LS483366.1_215917_216403_+	cd01610, PAP2_like, PAP2_like proteins, a super-family of histidine phosphatases and vanadium haloperoxidases, includes type 2 phosphatidic acid phosphatase or lipid phosphate phosphatase (LPP), Glucose-6-phosphatase, Phosphatidylglycerophosphatase B and bacterial acid phosphatase, vanadium chloroperoxidases, vanadium bromoperoxidases, and several other mostly uncharacterized subfamilies	NA|270aa|down_0|LS483366.1_216601_217411_-	cd07516, HAD_Pase, phosphatase, similar to Escherichia coli Cof and Thermotoga maritima TM0651; belongs to the haloacid dehalogenase-like superfamily	NA|256aa|down_1|LS483366.1_217403_218171_-	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|834aa|down_2|LS483366.1_218364_220866_+	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|152aa|down_3|LS483366.1_220964_221420_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|411aa|down_4|LS483366.1_221476_222709_+	pfam08840, BAAT_C, BAAT / Acyl-CoA thioester hydrolase C terminal	NA|138aa|down_5|LS483366.1_222850_223264_+	pfam11208, DUF2992, Protein of unknown function (DUF2992)	NA|289aa|down_6|LS483366.1_223611_224478_+	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|281aa|down_7|LS483366.1_224477_225320_+	COG1511, COG1511, Predicted membrane protein [Function unknown]	NA|152aa|down_8|LS483366.1_225338_225794_+	pfam04397, LytTR, LytTr DNA-binding domain	NA|144aa|down_9|LS483366.1_225803_226235_+	pfam11457, DUF3021, Protein of unknown function (DUF3021)
GCA_900475225.1_42685_C01	LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2	1244840-1244911	2	CRISPRCasFinder	no		cas3,DEDDh,csa3,RT,DinG,csn2,cas2,cas1,cas9,WYL	Orphan	GGACCTAAAAAGGTCCACTGAAC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,DEDDh,csa3,RT,DinG,csn2,cas2,cas1,cas9,WYL	NA|47aa|up_6|LS483366.1_1236085_1236226_-,NA|263aa|up_5|LS483366.1_1236237_1237026_-,NA|81aa|down_4|LS483366.1_1249087_1249330_-	NA|57aa|up_9|LS483366.1_1233112_1233283_-	TIGR02327, conserved_hypothetical_protein, conserved hypothetical integral membrane protein	NA|368aa|up_8|LS483366.1_1233670_1234774_-	pfam01270, Glyco_hydro_8, Glycosyl hydrolases family 8	NA|437aa|up_7|LS483366.1_1234782_1236093_-	cd06423, CESA_like, CESA_like is  the cellulose synthase superfamily	NA|47aa|up_6|LS483366.1_1236085_1236226_-	NA	NA|263aa|up_5|LS483366.1_1236237_1237026_-	NA	NA|384aa|up_4|LS483366.1_1237028_1238180_-	COG0381, WecB, UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]	NA|166aa|up_3|LS483366.1_1239259_1239757_-	pfam00665, rve, Integrase core domain	NA|329aa|up_2|LS483366.1_1241062_1242049_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|398aa|up_1|LS483366.1_1242114_1243308_-	PRK05250, PRK05250, S-adenosylmethionine synthetase; Validated	NA|313aa|up_0|LS483366.1_1243587_1244526_+	PRK11886, PRK11886, bifunctional biotin--[acetyl-CoA-carboxylase] ligase/biotin operon repressor BirA	NA|551aa|down_0|LS483366.1_1244915_1246568_-	PRK05563, PRK05563, DNA polymerase III subunits gamma and tau; Validated	NA|170aa|down_1|LS483366.1_1246567_1247077_-	COG1956, COG1956, GAF domain-containing protein [Signal transduction mechanisms]	NA|304aa|down_2|LS483366.1_1247101_1248013_-	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|59aa|down_3|LS483366.1_1248088_1248265_+	pfam11240, DUF3042, Protein of unknown function (DUF3042)	NA|81aa|down_4|LS483366.1_1249087_1249330_-	NA	NA|238aa|down_5|LS483366.1_1249535_1250249_-	pfam04233, Phage_Mu_F, Phage Mu protein F like protein	NA|116aa|down_6|LS483366.1_1250962_1251310_-	PRK05338, rplS, 50S ribosomal protein L19; Provisional	NA|409aa|down_7|LS483366.1_1251437_1252664_-	cd03682, ClC_sycA_like, ClC sycA-like chloride channel proteins	NA|95aa|down_8|LS483366.1_1252660_1252945_-	PRK07248, PRK07248, chorismate mutase	NA|512aa|down_9|LS483366.1_1253018_1254554_-	cd01031, EriC, ClC chloride channel EriC
GCA_900475225.1_42685_C01	LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	3	1452052-1452612	3,1,1	CRISPRCasFinder,CRT,PILER-CR	no	csn2,cas2,cas1,cas9	cas3,DEDDh,csa3,RT,DinG,csn2,cas2,cas1,cas9,WYL	Type II-B,Type II-C,Type II-A	GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC,GTTGTACAGTTACTTAAATCTTGAGAGTACAAAAAC	36,36,36	0	0	NA	NA	NA:NA:NA	8,8,7	8	TypeII-B,TypeII-C,TypeII-A	cas3,DEDDh,csa3,RT,DinG,csn2,cas2,cas1,cas9,WYL	NA|44aa|up_2|LS483366.1_1450151_1450283_+,NA|121aa|down_9|LS483366.1_1463766_1464129_-	NA|147aa|up_9|LS483366.1_1444271_1444712_-	pfam12732, YtxH, YtxH-like protein	NA|133aa|up_8|LS483366.1_1444724_1445123_-	COG4768, COG4768, Uncharacterized protein containing a divergent version of the methyl-accepting chemotaxis-like domain [General function prediction only]	NA|264aa|up_7|LS483366.1_1445247_1446039_-	PRK12437, PRK12437, prolipoprotein diacylglyceryl transferase; Reviewed	NA|310aa|up_6|LS483366.1_1446038_1446968_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|88aa|up_5|LS483366.1_1447095_1447359_-	COG1983, PspC, Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]	NA|147aa|up_4|LS483366.1_1447424_1447865_-	PRK04351, PRK04351, SprT family protein	NA|711aa|up_3|LS483366.1_1447851_1449984_-	COG2183, Tex, Transcriptional accessory protein [Transcription]	NA|44aa|up_2|LS483366.1_1450151_1450283_+	NA	NA|301aa|up_1|LS483366.1_1450288_1451191_+	COG0701, COG0701, Predicted permeases [General function prediction only]	NA|272aa|up_0|LS483366.1_1451190_1452006_+	COG3689, COG3689, Predicted membrane protein [Function unknown]	csn2|351aa|down_0|LS483366.1_1452675_1453728_-	cd12217, Stu0660_Csn2, Stu0660-like CRISPR/Cas system-associated protein Csn2	cas2|108aa|down_1|LS483366.1_1453724_1454048_-	COG3512, COG3512, CRISPR-associated protein, Cas2 homolog [Defense mechanisms]	cas1|304aa|down_2|LS483366.1_1454049_1454961_-	cd09720, Cas1_II, CRISPR/Cas system-associated protein Cas1	cas9|1140aa|down_3|LS483366.1_1455137_1458557_-	cd09643, Csn1, CRISPR/Cas system-associated protein Cas9	NA|312aa|down_4|LS483366.1_1458742_1459678_+	COG2826, Tra8, Transposase and inactivated derivatives, IS30 family [DNA replication, recombination, and repair]	NA|554aa|down_5|LS483366.1_1459764_1461426_-	PRK11660, PRK11660, putative transporter; Provisional	NA|205aa|down_6|LS483366.1_1461673_1462288_-	pfam09911, DUF2140, Uncharacterized protein conserved in bacteria (DUF2140)	NA|214aa|down_7|LS483366.1_1462383_1463025_-	cd01841, NnaC_like, NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases	NA|204aa|down_8|LS483366.1_1463051_1463663_-	pfam02517, Abi, CAAX protease self-immunity	NA|121aa|down_9|LS483366.1_1463766_1464129_-	NA
