The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	47170	94626	2184782	protease,integrase,transposase,tRNA	Staphylococcus_phage(16.67%)	40	67928:67982	74513:74567
SQF74787.1|47170_48862_-|tRNA	arginyl-tRNA synthetase	tRNA	A0A2I2L3K1	Orpheovirus	32.9	6.2e-77
SQF74790.1|49019_49445_+	arginine repressor ArgR	NA	NA	NA	NA	NA
SQF74795.1|49444_49804_+	membrane protein	NA	NA	NA	NA	NA
SQF74798.1|49796_52355_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	23.2	1.2e-42
SQF74800.1|52388_52844_-	integral membrane protein	NA	NA	NA	NA	NA
SQF74803.1|52840_53278_-	response regulator of the LytR/AlgR family protein	NA	NA	NA	NA	NA
SQF74805.1|53456_53762_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF74808.1|53811_55755_+	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.2	1.9e-61
SQF74810.1|55885_56107_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF74814.1|56264_56855_+	Holliday junction ATP-dependent DNA helicase RuvA	NA	NA	NA	NA	NA
SQF74816.1|56863_57418_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
SQF74819.1|57514_58786_+	putative competence-damage inducible protein	NA	NA	NA	NA	NA
SQF74821.1|58821_59961_+	recombinase A	NA	A0A0S2MVG1	Bacillus_phage	61.5	2.6e-119
SQF74823.1|60091_61078_+|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	40.4	3.2e-57
SQF74826.1|61215_61614_+	transcriptional regulator Spx	NA	NA	NA	NA	NA
67928:67982	attL	ACTCAAAATCCAGTGTCCGCAAGGACGTGCCGGTTCGACCCCGGCCGCCGGTATA	NA	NA	NA	NA
SQF74830.1|68065_69199_-|integrase	site-specific recombinase, phage integrase family	integrase	A0A1B2AQ00	Phage_Wrath	33.4	1.4e-37
SQF74833.1|69202_69397_-	hyptothetic protein	NA	NA	NA	NA	NA
SQF74835.1|69456_69843_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF74837.1|69845_71042_-	YdcR protein	NA	NA	NA	NA	NA
SQF74838.1|71082_71556_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF74840.1|71876_72329_+	Cro/CI family transcriptional regulator	NA	A8ASM2	Listeria_phage	33.8	1.1e-12
SQF74843.1|72495_73185_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF74845.1|73181_73994_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF74847.1|74030_74228_+	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
SQF74849.1|74616_79011_+	DNA polymerase III subunit alpha	NA	A0A0A7RWA3	Clostridium_phage	35.3	2.6e-18
74513:74567	attR	ACTCAAAATCCAGTGTCCGCAAGGACGTGCCGGTTCGACCCCGGCCGCCGGTATA	NA	NA	NA	NA
SQF74851.1|79174_80416_+	aminopeptidase PepS	NA	NA	NA	NA	NA
SQF74853.1|80435_80666_+	integral membrane protein	NA	NA	NA	NA	NA
SQF74856.1|80798_81227_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
SQF74858.1|81314_81860_+	NADPH-dependent FMN reductase, putative	NA	NA	NA	NA	NA
SQF74860.1|81913_82900_-|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	40.1	4.2e-57
SQF74862.1|83281_84814_-	Alkyl hydroperoxide reductase protein F	NA	V9VEY6	Lactococcus_phage	32.4	2.4e-19
SQF74865.1|84830_85391_-	peroxiredoxin	NA	NA	NA	NA	NA
SQF74867.1|85663_86431_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
SQF74870.1|86541_87582_+	elongation factor Ts	NA	NA	NA	NA	NA
SQF74872.1|87688_88159_-	small multidrug export protein	NA	NA	NA	NA	NA
SQF74874.1|88476_88932_+	CtsR family transcriptional regulator	NA	NA	NA	NA	NA
SQF74876.1|88932_91383_+|protease	ATP-dependent Clp protease, ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	40.0	1.0e-125
SQF74878.1|91511_92768_-	D-alanyl-D-alanine carboxypeptidase	NA	NA	NA	NA	NA
SQF74881.1|92986_93868_-|transposase	ISSth1, transposase (orf2), IS3 family	transposase	A0A0C5AEA5	Paenibacillus_phage	43.7	3.6e-44
SQF74883.1|93948_94626_-|transposase	ISSth1, transposase (orf1), IS3 family	transposase	NA	NA	NA	NA
>prophage 2
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	343312	348788	2184782		Streptococcus_phage(66.67%)	6	NA	NA
SQF75308.1|343312_344077_+	branched-chain amino acid ABC transporter ATPase	NA	A0A2H4PQG7	Staphylococcus_phage	25.2	4.0e-15
SQF75309.1|344076_344787_+	high-affinity branched-chain amino acid transport ATP-binding protein livF	NA	A0A2H4PQG7	Staphylococcus_phage	26.9	8.2e-15
SQF75310.1|344921_345581_+	AcuB family protein	NA	M1NSC5	Streptococcus_phage	59.2	1.5e-66
SQF75311.1|345759_346686_-	cysteine synthase	NA	A0A1X9I5K7	Streptococcus_phage	81.8	9.4e-144
SQF75312.1|346787_347414_-	Xaa-Pro dipeptidase	NA	A0A1X9I5T8	Streptococcus_phage	61.8	1.5e-68
SQF75313.1|347468_348788_+	late competence protein required for DNA uptake	NA	A0A1X9I5S6	Streptococcus_phage	52.1	1.4e-121
>prophage 3
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	392152	431377	2184782	protease,transposase,tRNA	Lactobacillus_phage(13.33%)	38	NA	NA
SQF75353.1|392152_392527_+|transposase	transposase	transposase	NA	NA	NA	NA
SQF75354.1|392528_393371_+	DegV family protein	NA	NA	NA	NA	NA
SQF75355.1|393430_394198_+	dihydrodipicolinate reductase	NA	NA	NA	NA	NA
SQF75356.1|394194_395397_+|tRNA	tRNA CCA-pyrophosphorylase	tRNA	H7BUW3	unidentified_phage	46.5	3.6e-39
SQF75357.1|395480_397361_+	ABC transporter domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	32.1	1.6e-65
SQF75358.1|397439_397943_-	putative uncharacterized conserved protein	NA	NA	NA	NA	NA
SQF75359.1|398034_398796_-	mutT/nudix family protein	NA	G3MA14	Bacillus_virus	31.8	4.0e-23
SQF75360.1|398852_399959_-	transcriptional regulator	NA	A0A2K9VDE3	Lactobacillus_phage	43.8	4.3e-79
SQF75361.1|400316_401669_+	NAD(p)-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
SQF75362.1|401847_403491_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75363.1|403648_404059_+	polypeptide deformylase	NA	A0A2I7S809	Vibrio_phage	32.8	9.3e-11
SQF75364.1|404244_404688_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
SQF75365.1|404691_406506_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.1	5.7e-28
SQF75366.1|406495_408274_+	ABC-type multidrug transport system, ATPase and permease component	NA	W8CYL7	Bacillus_phage	28.3	5.4e-47
SQF75367.1|408381_409005_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
SQF75368.1|409152_409776_+	GTP pyrophosphokinase	NA	NA	NA	NA	NA
SQF75369.1|409777_410455_+	Two-component response transcriptional regulator	NA	NA	NA	NA	NA
SQF75370.1|410468_411692_+	sensor histidine kinase	NA	NA	NA	NA	NA
SQF75371.1|411927_412665_+	UMP kinase	NA	NA	NA	NA	NA
SQF75372.1|412679_413237_+	ribosome recycling factor	NA	NA	NA	NA	NA
SQF75373.1|413326_414184_+	RNA-binding protein	NA	NA	NA	NA	NA
SQF75374.1|414192_414408_+	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF75375.1|414647_415850_+	surface immunogenic protein	NA	A0A2P1N5D1	Gordonia_phage	37.6	3.4e-13
SQF75376.1|415929_416994_+	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	48.2	7.7e-49
SQF75377.1|417118_417250_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75378.1|417250_417817_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75379.1|417969_419052_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75380.1|419200_420061_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75381.1|420170_422162_+|tRNA	methionyl-tRNA synthetase (methionine--tRNA ligase) (MetRS)	tRNA	A0A1V0SHR2	Klosneuvirus	36.4	7.5e-90
SQF75382.1|422316_423804_-|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	76.5	3.0e-208
SQF75383.1|423928_424774_-	2,5-diketo-d-gluconic acid reductase a	NA	A0A2H4PQR8	Staphylococcus_phage	37.8	4.4e-47
SQF75384.1|424784_425681_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	34.6	1.4e-06
SQF75385.1|425920_426661_-|protease	CAAX amino protease family protein	protease	NA	NA	NA	NA
SQF75386.1|427069_429028_+	glucan-binding protein C	NA	NA	NA	NA	NA
SQF75387.1|429256_430096_+	CHAP domain protein	NA	NA	NA	NA	NA
SQF75388.1|430401_430710_-|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	90.9	3.0e-14
SQF75389.1|430733_431099_-|transposase	transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	52.3	2.0e-20
SQF75390.1|431098_431377_-|transposase	IS3-Spn1, transposase	transposase	NA	NA	NA	NA
>prophage 4
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	650662	767581	2184782	lysis,transposase,protease	Staphylococcus_phage(33.33%)	60	NA	NA
SQF75551.1|650662_651919_-|transposase	transposase	transposase	A0A1S5SBP9	Streptococcus_phage	58.3	1.4e-129
SQF75552.1|652061_653744_+	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
SQF75553.1|653757_653937_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75554.1|653940_654165_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75555.1|656443_660874_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75556.1|660895_661411_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75557.1|666990_675507_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75558.1|679145_683777_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75559.1|683781_684180_+	LPXTG cell wall anchor domain	NA	NA	NA	NA	NA
SQF75560.1|684442_685063_-	RpiR family transcriptional regulator	NA	NA	NA	NA	NA
SQF75561.1|685502_689852_+	glucosyltransferase-S precursor (GTF-S) (Dextransucrase) (Sucrose 6-glucosyltransferase)	NA	NA	NA	NA	NA
SQF75562.1|690633_694617_+	MucBP domain protein	NA	NA	NA	NA	NA
SQF75563.1|694984_695701_+	lantibiotic transport ATP-binding protein srtF	NA	A0A2H4PQG7	Staphylococcus_phage	34.2	1.1e-30
SQF75564.1|695694_696504_+	ABC superfamily ATP binding cassette transporter permease subunit	NA	NA	NA	NA	NA
SQF75565.1|696484_697156_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75566.1|697380_698055_+	response regulator	NA	NA	NA	NA	NA
SQF75567.1|698039_699107_+	NisK protein	NA	NA	NA	NA	NA
SQF75568.1|699212_699776_+	maltose O-acetyltransferase	NA	NA	NA	NA	NA
SQF75569.1|699898_700309_+	transcriptional regulator	NA	NA	NA	NA	NA
SQF75570.1|700334_700520_+	permease of the major facilitator family protein	NA	NA	NA	NA	NA
SQF75571.1|700559_701720_+	permease of the major facilitator family protein	NA	A0A0M3UL24	Mycobacterium_phage	24.6	9.7e-05
SQF75572.1|701886_702645_+|protease	CAAX amino protease family protein	protease	NA	NA	NA	NA
SQF75573.1|702823_703840_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75574.1|703949_706829_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75575.1|707091_709332_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75576.1|709613_711572_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75577.1|711902_712775_+	pyridoxine biosynthesis protein	NA	NA	NA	NA	NA
SQF75578.1|712775_713369_+	glutamine amidotransferase subunit PdxT	NA	NA	NA	NA	NA
SQF75579.1|713534_714734_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75580.1|715098_717528_-	glucosyltransferase-S	NA	NA	NA	NA	NA
SQF75581.1|717612_719136_-	glucan-binding protein A, GbpA	NA	NA	NA	NA	NA
SQF75582.1|719866_723562_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75583.1|723616_727180_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75584.1|727237_729709_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75585.1|729766_732616_-	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75586.1|733626_738360_+	glucosyltransferase precursor	NA	NA	NA	NA	NA
SQF75587.1|738841_740827_+	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75588.1|740990_741230_-|transposase	putative transposase	transposase	A0A146ICT8	Staphylococcus_phage	45.9	3.5e-10
SQF75589.1|741174_742506_-|transposase	transposase IS663-like	transposase	Q9MBP7	Staphylococcus_prophage	34.6	4.3e-65
SQF75590.1|742791_743628_+	positive transcriptional regulator MutR family	NA	NA	NA	NA	NA
SQF75591.1|743734_743827_+	KxxxW-cyclized secreted peptide	NA	NA	NA	NA	NA
SQF75592.1|743896_745216_+	radical SAM	NA	NA	NA	NA	NA
SQF75593.1|745212_746304_+	putative transporter	NA	NA	NA	NA	NA
SQF75594.1|747215_751985_+	glucosyltransferase-I	NA	NA	NA	NA	NA
SQF75595.1|752215_752953_+	Predicted membrane protein	NA	NA	NA	NA	NA
SQF75596.1|752939_753215_+	transcriptional regulator	NA	NA	NA	NA	NA
SQF75597.1|753204_753792_+|lysis	hemolysis inducing protein	lysis	NA	NA	NA	NA
SQF75598.1|753839_754877_-	MccC family protein	NA	NA	NA	NA	NA
SQF75599.1|755386_755716_+	peptide methionine sulfoxide reductase	NA	NA	NA	NA	NA
SQF75600.1|755962_757978_+	metalloendopeptidase, putative	NA	E3T4I7	Cafeteria_roenbergensis_virus	29.2	1.4e-72
SQF75601.1|758114_758435_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75602.1|758485_759319_+	serine/threonine protein phosphatase	NA	NA	NA	NA	NA
SQF75603.1|759421_760687_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQF75604.1|761012_762002_+	dihydroxyacetone kinase subunit DhaK	NA	NA	NA	NA	NA
SQF75605.1|762033_762609_+	dihydroxyacetone kinase subunit DhaL	NA	NA	NA	NA	NA
SQF75606.1|762612_762987_+	dihydroxyacetone kinase, phosphotransfer subunit	NA	NA	NA	NA	NA
SQF75607.1|763000_763984_+	igG binding protein	NA	NA	NA	NA	NA
SQF75608.1|764136_765228_+	glycerol dehydrogenase	NA	NA	NA	NA	NA
SQF75609.1|765530_765875_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75610.1|766096_767581_-|protease	ATP-dependent Zn protease	protease	NA	NA	NA	NA
>prophage 5
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	845514	874230	2184782	bacteriocin,transposase	Brazilian_cedratvirus(28.57%)	28	NA	NA
SQF75675.1|845514_846273_+|bacteriocin	putative bacteriocin ABC transporter	bacteriocin	G9BWD6	Planktothrix_phage	36.2	2.5e-25
SQF75676.1|846274_848275_+	antimicrobial peptide ABC transporter permease	NA	NA	NA	NA	NA
SQF75677.1|848359_848854_+	Fe-S-cluster oxidoreductase	NA	NA	NA	NA	NA
SQF75678.1|848866_849532_+	Predicted membrane protein	NA	NA	NA	NA	NA
SQF75679.1|849670_850348_+	Predicted membrane protein (DUF2154)	NA	NA	NA	NA	NA
SQF75680.1|850414_851296_+	multidrug ABC transporter ATPase	NA	A0A2R8FG22	Brazilian_cedratvirus	29.9	1.4e-16
SQF75681.1|851292_852030_+	ABC transporter permease	NA	NA	NA	NA	NA
SQF75682.1|852040_852490_+	cytidine deaminase	NA	NA	NA	NA	NA
SQF75683.1|852632_853568_+	bile acid transporter	NA	NA	NA	NA	NA
SQF75684.1|854009_854219_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75685.1|854229_854409_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75686.1|854401_855283_+	multidrug ABC transporter ATPase	NA	A0A2R8FG22	Brazilian_cedratvirus	30.3	6.4e-17
SQF75687.1|855279_856017_+	multidrug ABC transporter permease	NA	NA	NA	NA	NA
SQF75688.1|856009_857104_+	sensor histidine kinase	NA	NA	NA	NA	NA
SQF75689.1|857100_857703_+	DNA-binding response regulator	NA	NA	NA	NA	NA
SQF75690.1|857867_859859_-	Reverse transcriptase (RNA-dependent DNA polymerase)	NA	NA	NA	NA	NA
SQF75691.1|860153_861419_+	rNA-directed DNA polymerase from retron EC86	NA	A0A0H4U087	Erysipelothrix_phage	23.7	3.2e-09
SQF75692.1|861460_862381_+	YjlA like protein	NA	NA	NA	NA	NA
SQF75693.1|862636_866548_+	fructan beta-fructosidase precursor (Exo-beta-D-fructosidase) (Fructanase)	NA	NA	NA	NA	NA
SQF75694.1|866630_867500_-	L-serine dehydratase, iron-sulfur-dependent subunit alpha	NA	NA	NA	NA	NA
SQF75695.1|867512_868184_-	L-serine dehydratase subunit beta	NA	NA	NA	NA	NA
SQF75696.1|868313_869333_-|transposase	transposase	transposase	H7BUM7	unidentified_phage	32.6	2.3e-34
SQF75697.1|869471_869846_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF75698.1|869877_870357_-|transposase	transposase	transposase	Q9JMN8	Wolbachia_phage	28.9	4.1e-10
SQF75699.1|870415_870595_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF75700.1|870869_872843_+	Lantibiotic biosynthesis protein	NA	NA	NA	NA	NA
SQF75701.1|872887_873271_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF75702.1|873243_874230_-|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	40.4	3.2e-57
>prophage 6
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	996397	1005669	2184782		Streptococcus_phage(42.86%)	10	NA	NA
SQF75818.1|996397_998206_+	glucosamine-fructose-6-phosphate aminotransferase	NA	A7IW18	Paramecium_bursaria_Chlorella_virus	39.1	7.3e-100
SQF75819.1|998323_998656_+	putative alkylphosphonate utilization operon protein PhnA	NA	NA	NA	NA	NA
SQF75820.1|998855_999497_+	ABC transporter permease	NA	NA	NA	NA	NA
SQF75821.1|999505_1000135_+	glutamine transport ATP-binding protein GlnQ	NA	G3M9Y6	Bacillus_virus	40.2	3.8e-32
SQF75822.1|1000147_1000999_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQF75823.1|1001112_1002528_+	SOS responce UmuC protein	NA	M1Q231	Streptococcus_phage	70.7	6.1e-195
SQF75824.1|1002524_1002902_+	Uncharacterised protein	NA	A0A1B0RXA8	Streptococcus_phage	45.0	1.2e-20
SQF75825.1|1002879_1003161_+	Uncharacterised protein	NA	M1PG86	Streptococcus_phage	55.1	3.0e-21
SQF75826.1|1003296_1004316_+	alcohol dehydrogenase 1 (Alcohol dehydrogenase I) (ADH I)	NA	A0A2K9L339	Tupanvirus	25.5	6.0e-27
SQF75827.1|1004775_1005669_+	ABC transporter	NA	A0A2H4PQG7	Staphylococcus_phage	28.5	2.4e-19
>prophage 7
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1188454	1242049	2184782	transposase	Planktothrix_phage(20.0%)	56	NA	NA
SQF75989.1|1188454_1189216_+|transposase	transposase	transposase	Q9JMN8	Wolbachia_phage	29.1	1.2e-24
SQF75990.1|1189235_1189622_+|transposase	transposase	transposase	NA	NA	NA	NA
SQF75991.1|1190420_1191005_-	uracil-DNA glycosylase	NA	NA	NA	NA	NA
SQF75992.1|1191045_1192452_-	dipeptidase PepV	NA	NA	NA	NA	NA
SQF75993.1|1192802_1192988_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
SQF75994.1|1193059_1193581_-	membrane protein	NA	NA	NA	NA	NA
SQF75995.1|1193666_1194140_-	GNAT family acetyltransferase	NA	NA	NA	NA	NA
SQF75996.1|1194183_1194543_-	LSU ribosomal protein L20p	NA	NA	NA	NA	NA
SQF75997.1|1194599_1194800_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
SQF75998.1|1194838_1195369_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	36.0	4.9e-12
SQF75999.1|1195528_1196209_-	cytidylate kinase	NA	NA	NA	NA	NA
SQF76000.1|1196229_1196886_-	LysM domain-containing protein	NA	NA	NA	NA	NA
SQF76001.1|1197112_1197616_-	pore-forming peptide	NA	NA	NA	NA	NA
SQF76002.1|1197672_1198896_-	peptidase T	NA	NA	NA	NA	NA
SQF76003.1|1198969_1201096_-	cell wall hydrolase/autolysin	NA	S5M633	Brevibacillus_phage	40.5	2.1e-21
SQF76004.1|1201253_1201811_-	signal peptidase I	NA	NA	NA	NA	NA
SQF76005.1|1201932_1203162_-	TPR repeat containing protein	NA	NA	NA	NA	NA
SQF76006.1|1203151_1204330_-	transporter	NA	NA	NA	NA	NA
SQF76007.1|1204339_1204822_-	mutator MutT protein	NA	NA	NA	NA	NA
SQF76008.1|1204976_1205906_-	cell division ABC transporter permease	NA	NA	NA	NA	NA
SQF76009.1|1205898_1206591_-	cell division ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.6	1.0e-30
SQF76010.1|1206677_1207658_-	peptide chain release factor 2	NA	NA	NA	NA	NA
SQF76011.1|1207828_1208947_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
SQF76012.1|1209058_1209898_+	Ser/Thr protein phosphatase family protein	NA	NA	NA	NA	NA
SQF76013.1|1209923_1210670_-	putative NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
SQF76014.1|1210779_1213464_-	P-type cation-transporting ATPase	NA	M1IAU8	Acanthocystis_turfacea_Chlorella_virus	27.4	6.2e-71
SQF76015.1|1213728_1214115_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQF76016.1|1214139_1214904_-	pnp/Udp family phosphorylase	NA	NA	NA	NA	NA
SQF76017.1|1214908_1215775_-	acetyltransferase, gnat family protein	NA	NA	NA	NA	NA
SQF76018.1|1215953_1216760_+	phosphatase yidA	NA	NA	NA	NA	NA
SQF76019.1|1216759_1217974_+	putative peptidoglycan FemAB like branched peptide synthesis protein	NA	NA	NA	NA	NA
SQF76020.1|1218112_1218586_-|transposase	transposase-like protein	transposase	A0A1P8BMC0	Lactococcus_phage	33.3	2.0e-17
SQF76021.1|1219272_1219632_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
SQF76022.1|1219690_1220503_-	putative uncharacterized protein vicX	NA	A0A0C5AJ83	Bacteriophage	37.1	2.1e-38
SQF76023.1|1220508_1221849_-	sensor protein YycG	NA	W8CYF6	Bacillus_phage	35.3	1.9e-36
SQF76024.1|1221841_1222549_-	transcriptional regulator	NA	W8CYM9	Bacillus_phage	39.6	1.9e-40
SQF76025.1|1222834_1223602_+	glutamine transport ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	42.0	1.3e-37
SQF76026.1|1223611_1224445_+	putative major cell-binding factor	NA	NA	NA	NA	NA
SQF76027.1|1224462_1225161_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
SQF76028.1|1225172_1225823_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
SQF76029.1|1226009_1226777_+	glutamine transport ATP-binding protein GlnQ	NA	G9BWD6	Planktothrix_phage	41.1	4.8e-37
SQF76030.1|1226788_1227622_+	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA	NA
SQF76031.1|1227639_1228338_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
SQF76032.1|1228349_1229000_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
SQF76033.1|1228919_1230512_-|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	76.1	6.0e-207
SQF76034.1|1230640_1231522_-	DNA-entry nuclease	NA	NA	NA	NA	NA
SQF76035.1|1231583_1231772_-	competence-associated protein	NA	NA	NA	NA	NA
SQF76036.1|1231773_1233045_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQF76037.1|1233112_1233283_-	membrane protein	NA	NA	NA	NA	NA
SQF76038.1|1233670_1234774_-	glycosyl hydrolase family 8	NA	NA	NA	NA	NA
SQF76039.1|1234782_1236093_-	N-acetyllactosaminide beta-1,6-N -acetylglucosaminyl-transferase	NA	NA	NA	NA	NA
SQF76040.1|1236085_1236226_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76041.1|1236237_1237026_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76042.1|1237028_1238180_-	UDP-N-acetylglucosamine 2-epimerase	NA	A0A2P1ELS7	Moumouvirus	29.0	1.6e-31
SQF76043.1|1239259_1239757_-|transposase	transposase-like protein	transposase	A0A1X9I619	Streptococcus_phage	91.4	3.5e-36
SQF76044.1|1241062_1242049_+|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	39.8	3.5e-56
>prophage 8
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1259396	1279126	2184782	transposase,integrase	Streptococcus_phage(55.56%)	26	1264937:1264952	1273330:1273345
SQF76062.1|1259396_1260155_-	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	26.5	7.7e-11
SQF76063.1|1260151_1261021_-	ribose/xylose/arabinose/galactoside ABC transporter permease component	NA	NA	NA	NA	NA
SQF76064.1|1261030_1262032_-	ABC transporter substrate binding protein	NA	NA	NA	NA	NA
SQF76065.1|1262168_1262390_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
SQF76066.1|1262500_1262710_+|transposase	transposase of family protein	transposase	A0A1P8BMC0	Lactococcus_phage	36.5	1.3e-05
SQF76067.1|1263026_1263356_-|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	60.2	3.2e-30
SQF76068.1|1263327_1263831_-|integrase	putative integrase protein	integrase	W5R8L2	Staphylococcus_phage	50.4	4.3e-26
SQF76069.1|1264266_1264566_+|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	89.9	3.8e-46
1264937:1264952	attL	TTATTTTACTGTGCGG	NA	NA	NA	NA
SQF76070.1|1265160_1265583_-	putative phage-associated protein	NA	C5IUL6	Streptococcus_phage	80.0	9.4e-59
SQF76071.1|1265618_1266170_-	Uncharacterised protein	NA	A0A2H4J7D7	uncultured_Caudovirales_phage	91.3	4.3e-96
SQF76072.1|1266187_1266460_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76073.1|1266479_1266824_-	Uncharacterised protein	NA	A0A2I6QR21	Streptococcus_phage	96.5	2.7e-56
SQF76074.1|1267274_1268021_-	phage-associated cell wall hydrolase	NA	F8HGP2	Streptococcus_phage	91.5	1.8e-129
SQF76075.1|1268022_1268319_-	lin2375 protein	NA	A0A2H4J017	uncultured_Caudovirales_phage	67.4	1.7e-30
SQF76076.1|1268399_1268588_-	phage protein	NA	Q708Q8	Streptococcus_phage	53.4	2.8e-07
SQF76077.1|1268755_1268959_+	Uncharacterised protein	NA	M1PLB3	Streptococcus_phage	79.1	4.1e-20
SQF76078.1|1268936_1269101_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76079.1|1269119_1269356_-	prophage pi2 protein 05	NA	A0A2P0VIW8	Streptococcus_phage	78.3	1.9e-24
SQF76080.1|1269524_1269908_+	prophage LambdaSa03, transcriptional regulator,Cro/CI family	NA	O34035	Streptococcus_phage	56.7	1.2e-31
SQF76081.1|1269909_1270797_+	Abi family protein	NA	NA	NA	NA	NA
SQF76082.1|1270955_1271333_+	cI-like repressor, metallo-prtoeinase motif protein	NA	W6LM52	Streptococcus_phage	88.5	7.9e-57
SQF76083.1|1271326_1271965_+	Uncharacterised protein	NA	A0A2H4J009	uncultured_Caudovirales_phage	76.4	3.4e-60
SQF76084.1|1272099_1273272_+|integrase	phage integrase family protein	integrase	A0A1S5S8R9	Streptococcus_phage	52.0	1.1e-101
SQF76085.1|1273329_1274832_-	pyruvate kinase	NA	NA	NA	NA	NA
1273330:1273345	attR	TTATTTTACTGTGCGG	NA	NA	NA	NA
SQF76086.1|1274902_1275922_-	6-phosphofructokinase	NA	NA	NA	NA	NA
SQF76087.1|1276015_1279126_-	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	28.8	2.0e-113
>prophage 9
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1411714	1463663	2184782	integrase,tRNA,transposase,protease	Staphylococcus_phage(50.0%)	52	1452000:1452035	1459706:1459741
SQF76207.1|1411714_1412614_-|protease	protease HtpX-like protein	protease	NA	NA	NA	NA
SQF76208.1|1412615_1413176_-	cytoplasmic membrane protein	NA	NA	NA	NA	NA
SQF76209.1|1413324_1414329_-	deoxyribonuclease	NA	NA	NA	NA	NA
SQF76210.1|1414470_1417767_-	alpha-1,3-glucanase	NA	NA	NA	NA	NA
SQF76211.1|1417911_1418847_-|integrase	putative integrase protein	integrase	W5R8L2	Staphylococcus_phage	54.0	4.0e-86
SQF76212.1|1419358_1420246_-|tRNA	glycyl-tRNA synthetase subunit alpha	tRNA	NA	NA	NA	NA
SQF76213.1|1420330_1421416_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
SQF76214.1|1421408_1421747_-	plasmid maintenance system killer protein	NA	NA	NA	NA	NA
SQF76215.1|1421952_1423647_-	Uncharacterized conserved protein	NA	NA	NA	NA	NA
SQF76216.1|1423656_1423986_-	MazG-like family	NA	NA	NA	NA	NA
SQF76217.1|1424101_1424233_-	toxin-antitoxin system, antitoxin component, Xre family	NA	NA	NA	NA	NA
SQF76218.1|1424242_1425010_-	short chain dehydrogenase/reductase family oxidoreductase	NA	NA	NA	NA	NA
SQF76219.1|1425040_1426198_-	suB1079 undefined product 1051177:1052352 reverse MW:44904	NA	NA	NA	NA	NA
SQF76220.1|1426307_1426934_+	membrane protein	NA	NA	NA	NA	NA
SQF76221.1|1426971_1427298_-	HAD superfamily hydrolase	NA	NA	NA	NA	NA
SQF76222.1|1427336_1427813_-	HAD superfamily hydrolase	NA	NA	NA	NA	NA
SQF76223.1|1427901_1428354_+	Na+ driven multidrug efflux pump	NA	NA	NA	NA	NA
SQF76224.1|1428544_1429447_+	endolysin	NA	A9QTG1	Bacillus_phage	35.7	3.6e-23
SQF76225.1|1429559_1430033_+	transcriptional regulator	NA	NA	NA	NA	NA
SQF76226.1|1430035_1430674_+	phosphoglycerate mutase	NA	NA	NA	NA	NA
SQF76227.1|1430823_1431726_-	hydrolase	NA	NA	NA	NA	NA
SQF76228.1|1432045_1432525_-|tRNA	Valyl-tRNA synthetase	tRNA	NA	NA	NA	NA
SQF76229.1|1432538_1433792_-	LysM domain-containing protein	NA	NA	NA	NA	NA
SQF76230.1|1434019_1435510_+|tRNA	lysyl-tRNA synthetase	tRNA	A0A2K9L3L6	Tupanvirus	39.5	2.3e-91
SQF76231.1|1436118_1436997_+	sepS9	NA	NA	NA	NA	NA
SQF76232.1|1437295_1438630_+	manganese transport protein	NA	NA	NA	NA	NA
SQF76233.1|1438666_1438879_-|tRNA	bacterial seryl-tRNA synthetase related protein	tRNA	NA	NA	NA	NA
SQF76234.1|1439003_1439288_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76235.1|1439382_1439922_+	biotin synthase	NA	NA	NA	NA	NA
SQF76236.1|1440284_1441571_-	U32 family peptidase	NA	Q6DW11	Phage_TP	32.1	1.2e-40
SQF76237.1|1441666_1442596_-|protease	protease	protease	NA	NA	NA	NA
SQF76238.1|1442834_1443131_+	membrane protein	NA	NA	NA	NA	NA
SQF76239.1|1443243_1444230_+|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	40.1	4.2e-57
SQF76240.1|1444271_1444712_-	gas vesicle protein	NA	NA	NA	NA	NA
SQF76241.1|1444724_1445123_-	methyl-accepting chemotaxis-like domain-containing protein	NA	NA	NA	NA	NA
SQF76242.1|1445247_1446039_-	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
SQF76243.1|1446038_1446968_-	HPr(Ser) kinase/phosphatase	NA	NA	NA	NA	NA
SQF76244.1|1447095_1447359_-	stress-responsive transcriptional regulator PspC	NA	NA	NA	NA	NA
SQF76245.1|1447424_1447865_-	SprT family metallopeptidase	NA	NA	NA	NA	NA
SQF76246.1|1447851_1449984_-	protein tex	NA	NA	NA	NA	NA
SQF76247.1|1450151_1450283_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76248.1|1450288_1451191_+	putative permease	NA	NA	NA	NA	NA
SQF76249.1|1451190_1452006_+	membrane protein	NA	NA	NA	NA	NA
1452000:1452035	attL	ATTTTAAAAAGCCAAGTTCAGTTGAACTGGCTTTTT	NA	NA	NA	NA
SQF76250.1|1452675_1453728_-	CRISPR-associated protein Cas7	NA	NA	NA	NA	NA
SQF76251.1|1453724_1454048_-	CRISPR-associated endoribonuclease Cas2	NA	NA	NA	NA	NA
SQF76252.1|1454049_1454961_-	CRISPR-associated protein, Cas1 family	NA	NA	NA	NA	NA
SQF76253.1|1455137_1458557_-	CRISPR-associated endonuclease, Csn1 family	NA	NA	NA	NA	NA
SQF76254.1|1458742_1459678_+|integrase	putative integrase protein	integrase	W5R8L2	Staphylococcus_phage	54.0	4.0e-86
SQF76255.1|1459764_1461426_-	sulfate permease family protein	NA	NA	NA	NA	NA
1459706:1459741	attR	ATTTTAAAAAGCCAAGTTCAGTTGAACTGGCTTTTT	NA	NA	NA	NA
SQF76256.1|1461673_1462288_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76257.1|1462383_1463025_-	lipase/acylhydrolase family protein	NA	NA	NA	NA	NA
SQF76258.1|1463051_1463663_-|protease	CAAX amino protease family protein	protease	NA	NA	NA	NA
>prophage 10
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1513181	1522554	2184782	transposase,tRNA	Streptococcus_phage(100.0%)	8	NA	NA
SQF76314.1|1513181_1513859_-	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	91.6	2.4e-112
SQF76315.1|1513855_1515019_-	methyltransferase	NA	W6LLI2	Streptococcus_phage	94.3	1.5e-210
SQF76316.1|1515180_1517367_+	glycerol phosphate lipoteichoic acid synthase 2	NA	W6LM83	Streptococcus_phage	95.0	0.0e+00
SQF76317.1|1517370_1518840_-|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	76.8	1.3e-208
SQF76318.1|1519103_1519289_+|tRNA	Isoleucyl-tRNA synthetase, putative	tRNA	W6LMT3	Streptococcus_phage	93.4	1.9e-24
SQF76319.1|1519442_1520747_-	Enolase	NA	W6LP63	Streptococcus_phage	99.5	1.4e-246
SQF76320.1|1520952_1521408_+	glycogen synthase	NA	W6LLD2	Streptococcus_phage	82.8	5.0e-66
SQF76321.1|1521438_1522554_-	glycerate kinase	NA	W6LM47	Streptococcus_phage	85.2	1.9e-135
>prophage 11
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1688674	1694976	2184782		Streptococcus_phage(83.33%)	8	NA	NA
SQF76477.1|1688674_1689028_-	Spx/MgsR family transcriptional regulator	NA	M1PLC0	Streptococcus_phage	67.5	1.3e-40
SQF76478.1|1689062_1689557_-	methylated-DNA--protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	46.3	6.9e-37
SQF76479.1|1689612_1690791_-	phosphoglycerate dehydrogenase	NA	M1NSB9	Streptococcus_phage	80.1	1.0e-179
SQF76480.1|1690809_1691367_-	GNAT family acetyltransferase	NA	M1PSC3	Streptococcus_phage	60.1	1.2e-56
SQF76481.1|1691379_1692474_-	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	80.7	2.8e-171
SQF76482.1|1692628_1693522_-	transcriptional regulator	NA	NA	NA	NA	NA
SQF76483.1|1693637_1694033_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
SQF76484.1|1694076_1694976_-	spfh domain/band 7 family protein	NA	A0A1V0SL90	Klosneuvirus	32.8	1.8e-35
>prophage 12
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1725912	1784126	2184782	transposase,tRNA	Acinetobacter_phage(20.0%)	58	NA	NA
SQF76515.1|1725912_1726854_-|tRNA	tRNA-processing ribonuclease BN	tRNA	NA	NA	NA	NA
SQF76516.1|1726873_1727734_-	methionine aminopeptidase	NA	NA	NA	NA	NA
SQF76517.1|1727773_1729054_-	DRTGG domain-containing protein	NA	NA	NA	NA	NA
SQF76518.1|1729046_1729592_-	acetyltransferase	NA	NA	NA	NA	NA
SQF76519.1|1729657_1730920_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQF76520.1|1731005_1733246_-	DNA internalization-related competence protein ComEC/Rec2	NA	M1PSD2	Streptococcus_phage	60.9	1.6e-56
SQF76521.1|1733235_1733934_-	DNA uptake protein or related DNA-binding protein	NA	NA	NA	NA	NA
SQF76522.1|1734041_1734797_-	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SQF76523.1|1734890_1735862_+	polysaccharide deacetylase family protein	NA	NA	NA	NA	NA
SQF76524.1|1735911_1736676_+	putative methyltransferase	NA	NA	NA	NA	NA
SQF76525.1|1736679_1736949_+	putative endonuclease containing a URI domain	NA	A0A0C5AS36	Spodoptera_frugiperda_granulovirus	39.5	1.5e-06
SQF76526.1|1737040_1737427_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF76527.1|1737446_1738208_-|transposase	transposase	transposase	Q9JMN8	Wolbachia_phage	29.1	9.4e-25
SQF76528.1|1738479_1740066_-	ATP-dependent RNA helicase, dead/deah box family	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.5	1.4e-59
SQF76529.1|1740260_1741166_-	cation transporter	NA	NA	NA	NA	NA
SQF76530.1|1741178_1741559_-	superfamily I DNA and RNA helicase	NA	A6N235	Microbacterium_phage	40.6	1.0e-08
SQF76531.1|1741863_1742439_+	putative proton-coupled thiamine transporter YuaJ	NA	NA	NA	NA	NA
SQF76532.1|1742607_1743471_+	transcriptional regulator MutR family protein	NA	NA	NA	NA	NA
SQF76533.1|1743583_1744762_+	macrolide-efflux protein	NA	NA	NA	NA	NA
SQF76534.1|1745063_1746608_-	regulator of gtfB	NA	A0A1B0RXH7	Streptococcus_phage	28.0	5.4e-35
SQF76535.1|1746955_1747621_-	membrane protein	NA	NA	NA	NA	NA
SQF76536.1|1747709_1749083_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
SQF76537.1|1749195_1749921_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
SQF76538.1|1749889_1750615_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
SQF76539.1|1750586_1751288_+	ATP-dependent DNA helicase	NA	NA	NA	NA	NA
SQF76540.1|1751425_1752307_-|transposase	ISSth1, transposase (orf2), IS3 family	transposase	A0A0C5AEA5	Paenibacillus_phage	43.7	3.6e-44
SQF76541.1|1752387_1753065_-|transposase	ISSth1, transposase (orf1), IS3 family	transposase	NA	NA	NA	NA
SQF76542.1|1753186_1754041_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQF76543.1|1754082_1754841_-	amino acid (glutamine) ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	6.1e-32
SQF76544.1|1754842_1755520_-	amino acid (glutamine) ABC transporter permease	NA	NA	NA	NA	NA
SQF76545.1|1755479_1756160_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
SQF76546.1|1756597_1757644_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
SQF76547.1|1757782_1757986_-	heavy metal-associated domain-containing protein	NA	NA	NA	NA	NA
SQF76548.1|1758061_1760290_-	copper-transporting P-type ATPase copA (Protein copA)	NA	A0A218MNH6	uncultured_virus	33.2	1.6e-93
SQF76549.1|1760293_1760725_-	putative transcriptional regulator	NA	NA	NA	NA	NA
SQF76550.1|1760892_1762065_-	major facilitator superfamily permease	NA	NA	NA	NA	NA
SQF76551.1|1762481_1762619_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76552.1|1762780_1763563_-	tryptophan synthase subunit alpha	NA	NA	NA	NA	NA
SQF76553.1|1763566_1764775_-	tryptophan synthase subunit beta	NA	NA	NA	NA	NA
SQF76554.1|1764771_1765353_-	N-(5'-phosphoribosyl)anthranilate isomerase	NA	NA	NA	NA	NA
SQF76555.1|1765339_1766107_-	indole-3-glycerol phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	36.2	6.3e-29
SQF76556.1|1766103_1767108_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	34.7	2.5e-49
SQF76557.1|1767197_1767764_-	para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	45.6	7.7e-40
SQF76558.1|1767760_1769116_-	anthranilate synthase component I	NA	NA	NA	NA	NA
SQF76559.1|1769194_1769473_-	Chorismate mutase	NA	NA	NA	NA	NA
SQF76560.1|1770050_1770428_-	dihydroorotate dehydrogenase 1	NA	NA	NA	NA	NA
SQF76561.1|1770495_1772844_-	cation transporting ATPase	NA	M1I547	Acanthocystis_turfacea_Chlorella_virus	24.9	4.8e-35
SQF76562.1|1773007_1773517_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76563.1|1773818_1774118_+	YbaB/EbfC family DNA-binding protein	NA	NA	NA	NA	NA
SQF76564.1|1774228_1774846_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76565.1|1775936_1776638_+	macrolide export ATP-binding/permease protein MacB	NA	G9BWD6	Planktothrix_phage	39.4	2.0e-37
SQF76566.1|1776652_1779295_+	ABC transporter permease	NA	NA	NA	NA	NA
SQF76567.1|1779345_1780074_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
SQF76568.1|1780248_1780839_-	DNA polymerase III subunit epsilon	NA	NA	NA	NA	NA
SQF76569.1|1780887_1781424_-	DNA-binding protein	NA	NA	NA	NA	NA
SQF76570.1|1781940_1782300_+	metal-sulfur cluster biosynthetic enzyme	NA	NA	NA	NA	NA
SQF76571.1|1782486_1783164_+|transposase	ISSth1, transposase (orf1), IS3 family	transposase	NA	NA	NA	NA
SQF76572.1|1783244_1784126_+|transposase	ISSth1, transposase (orf2), IS3 family	transposase	A0A0C5AEA5	Paenibacillus_phage	43.7	3.6e-44
>prophage 13
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1806629	1862188	2184782	protease,bacteriocin,transposase,tRNA	Bacillus_virus(13.33%)	60	NA	NA
SQF76598.1|1806629_1806932_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit C	tRNA	NA	NA	NA	NA
SQF76599.1|1807071_1807416_-	group 1 glycosyl transferase	NA	NA	NA	NA	NA
SQF76600.1|1807532_1808972_-	glycoside hydrolase family 1	NA	NA	NA	NA	NA
SQF76601.1|1809128_1809680_-	isochorismatase family protein	NA	G3MA16	Bacillus_virus	40.3	3.4e-24
SQF76602.1|1809746_1810532_-	GTP-sensing transcriptional pleiotropic repressor CodY	NA	NA	NA	NA	NA
SQF76603.1|1810798_1812013_-	class I and II aminotransferase	NA	NA	NA	NA	NA
SQF76604.1|1812372_1812825_+	universal stress family protein	NA	NA	NA	NA	NA
SQF76605.1|1812906_1813659_-	membrane associated protein	NA	NA	NA	NA	NA
SQF76606.1|1813728_1814529_-	pyruvate formate-lyase activating enzyme	NA	A0A2P0VNQ0	Tetraselmis_virus	31.8	2.9e-24
SQF76607.1|1814715_1815438_-	cell surface protein A	NA	NA	NA	NA	NA
SQF76608.1|1815791_1817123_-	magnesium and cobalt efflux protein CorC	NA	NA	NA	NA	NA
SQF76609.1|1817233_1818016_+	ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA	NA	A0A2K9L0W2	Tupanvirus	25.6	1.7e-08
SQF76610.1|1818199_1820266_-	Na+/H+ antiporter	NA	NA	NA	NA	NA
SQF76611.1|1820274_1820517_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76612.1|1820513_1821062_-	putative rRNA methylase	NA	A0A2H4PQV0	Staphylococcus_phage	44.6	2.4e-38
SQF76613.1|1821058_1822003_-	radical SAM protein	NA	A0A2H4PQV5	Staphylococcus_phage	46.2	1.2e-34
SQF76614.1|1822086_1823163_-|protease	ATP-dependent protease La	protease	NA	NA	NA	NA
SQF76615.1|1823140_1823638_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	30.1	2.2e-14
SQF76616.1|1823670_1824273_-	methyltransferase	NA	NA	NA	NA	NA
SQF76617.1|1824358_1825279_-	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	52.3	2.7e-87
SQF76618.1|1825344_1825569_-	thioredoxin	NA	NA	NA	NA	NA
SQF76619.1|1825780_1826524_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.1	1.2e-29
SQF76620.1|1826523_1827447_-	polar amino acid ABC uptake transporter membrane-spanning protein	NA	NA	NA	NA	NA
SQF76621.1|1827683_1827998_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76622.1|1827866_1828697_-	polar amino acid ABC uptake transporter substrate binding protein	NA	NA	NA	NA	NA
SQF76623.1|1828911_1829802_-	protein, beta-lactamase/transpeptidase-like predicted	NA	NA	NA	NA	NA
SQF76624.1|1829902_1831012_-	DNA polymerase IV (Pol IV)	NA	NA	NA	NA	NA
SQF76625.1|1831279_1833592_+	pyruvate formate-lyase	NA	A0A2P0VNR5	Tetraselmis_virus	32.4	1.1e-113
SQF76626.1|1833750_1833888_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76627.1|1833902_1835597_+	extracellular protein	NA	NA	NA	NA	NA
SQF76628.1|1835884_1836667_+	carbonic anhydrase	NA	NA	NA	NA	NA
SQF76629.1|1836752_1837205_+	acetyltransferase	NA	NA	NA	NA	NA
SQF76630.1|1837221_1837896_-	putative lipoprotein	NA	NA	NA	NA	NA
SQF76631.1|1837879_1838827_-	beta-lactamase	NA	A0A1D8EXR7	Mycobacterium_phage	25.1	1.2e-05
SQF76632.1|1838826_1839582_-	C3-degrading proteinase	NA	NA	NA	NA	NA
SQF76633.1|1839755_1840427_+	abortive infection protein	NA	NA	NA	NA	NA
SQF76634.1|1840514_1841381_-	glycerol facilitator-aquaporin gla	NA	M1HJ77	Paramecium_bursaria_Chlorella_virus	28.4	2.6e-18
SQF76635.1|1841504_1843772_+	Xaa-pro dipeptidyl-peptidase	NA	NA	NA	NA	NA
SQF76636.1|1843852_1844233_-|bacteriocin	putative bacteriocin self-immunity protein	bacteriocin	NA	NA	NA	NA
SQF76637.1|1844357_1844648_-	membrane protein	NA	NA	NA	NA	NA
SQF76638.1|1844939_1845236_-	Xre-like reg	NA	NA	NA	NA	NA
SQF76639.1|1845274_1845481_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76640.1|1846170_1847796_-|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	76.8	1.5e-208
SQF76641.1|1848103_1848505_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76642.1|1848787_1848976_-|bacteriocin	bacteriocin BlpI	bacteriocin	NA	NA	NA	NA
SQF76643.1|1848988_1849222_-	Bacteriocin-like peptide J BlpJ	NA	NA	NA	NA	NA
SQF76644.1|1849365_1849533_-	membrane protein	NA	NA	NA	NA	NA
SQF76645.1|1849548_1849728_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
SQF76646.1|1849887_1851633_-	multidrug resistance-like ATP-binding protein mdlB	NA	F2Y1V6	Organic_Lake_phycodnavirus	26.8	3.3e-17
SQF76647.1|1851625_1853383_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	28.2	1.0e-45
SQF76648.1|1853446_1853842_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76649.1|1853828_1853918_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76650.1|1853995_1854523_-	VanZ-like protein	NA	NA	NA	NA	NA
SQF76651.1|1854524_1855694_-	radical SAM enzyme, Cfr family	NA	NA	NA	NA	NA
SQF76652.1|1855697_1856420_-	transcriptional regulator	NA	NA	NA	NA	NA
SQF76653.1|1856474_1857830_-	Ser/Thr phosphatase family protein	NA	NA	NA	NA	NA
SQF76654.1|1858112_1858349_-	Bacteriocin class II with double-glycine leader peptide	NA	NA	NA	NA	NA
SQF76655.1|1858489_1859743_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
SQF76656.1|1859739_1860468_-	response regulator	NA	NA	NA	NA	NA
SQF76657.1|1861168_1862188_+|transposase	transposase	transposase	A0A2K9V2S9	Faecalibacterium_phage	34.9	7.1e-36
>prophage 14
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	1979161	2031957	2184782	protease,bacteriocin,transposase,tRNA	Streptococcus_phage(33.33%)	53	NA	NA
SQF76773.1|1979161_1980622_+|transposase	transposase	transposase	A0A1X9I5T2	Streptococcus_phage	76.1	3.6e-206
SQF76774.1|1980634_1981048_-	esterase	NA	NA	NA	NA	NA
SQF76775.1|1981065_1981401_-	thioredoxin domain containing protein	NA	NA	NA	NA	NA
SQF76776.1|1986925_1988068_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	42.8	9.3e-85
SQF76777.1|1988274_1988409_-	LSU ribosomal protein L34p	NA	NA	NA	NA	NA
SQF76778.1|1988604_1989168_-	Flavodoxin-like fold protein	NA	NA	NA	NA	NA
SQF76779.1|1989164_1989761_-	putative transcriptional regulator	NA	NA	NA	NA	NA
SQF76780.1|1989892_1990936_-	r3H domain protein	NA	NA	NA	NA	NA
SQF76781.1|1990947_1991802_-	preprotein translocase subunit YidC	NA	NA	NA	NA	NA
SQF76782.1|1991869_1992205_-	ribonuclease P protein component	NA	NA	NA	NA	NA
SQF76783.1|1992289_1993675_-	argininosuccinate lyase	NA	NA	NA	NA	NA
SQF76784.1|1994001_1995201_-	argininosuccinate synthase	NA	NA	NA	NA	NA
SQF76785.1|1996192_1997014_-|transposase	transposase InsI for insertion sequence element IS30B/C/D	transposase	W5R8L2	Staphylococcus_phage	41.1	2.8e-43
SQF76786.1|1997225_1997969_-	response regulator FasA	NA	NA	NA	NA	NA
SQF76787.1|1997970_1999287_-	putative histidine kinase	NA	NA	NA	NA	NA
SQF76788.1|1999310_2000591_-	sensor histidine kinase	NA	NA	NA	NA	NA
SQF76789.1|2000612_2001503_-	putative histidine kinase of the competence regulon, ComD	NA	NA	NA	NA	NA
SQF76790.1|2001557_2002865_-	putative histidine kinase of the competence regulon, ComD	NA	NA	NA	NA	NA
SQF76791.1|2003317_2004772_-|tRNA	glutamyl-tRNA synthetase	tRNA	NA	NA	NA	NA
SQF76792.1|2005007_2006978_-	oligopeptide binding protein 3	NA	NA	NA	NA	NA
SQF76793.1|2007159_2007849_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQF76794.1|2007948_2008374_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQF76795.1|2008545_2008899_+	integral membrane protein	NA	NA	NA	NA	NA
SQF76796.1|2008993_2009491_-	carbonate dehydratase	NA	NA	NA	NA	NA
SQF76797.1|2009641_2010337_-	HTH DNA-binding protein	NA	NA	NA	NA	NA
SQF76798.1|2010413_2011661_-	DNA repair protein	NA	NA	NA	NA	NA
SQF76799.1|2011771_2012239_-	Isochorismatase family	NA	NA	NA	NA	NA
SQF76800.1|2012248_2012695_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	Q332E8	Clostridium_botulinum_C_phage	50.7	2.5e-33
SQF76801.1|2012902_2013505_+	NADPH-dependent fmn reductase	NA	A0A2P0ZL77	Lactobacillus_phage	54.2	1.8e-55
SQF76802.1|2013523_2014774_+	flavin reductase	NA	A0A2P0ZL82	Lactobacillus_phage	52.7	7.6e-56
SQF76803.1|2014890_2015682_+	formate/nitrite transporter family protein	NA	NA	NA	NA	NA
SQF76804.1|2015690_2016257_+	membrane-bound protein	NA	NA	NA	NA	NA
SQF76805.1|2016371_2017394_+	glycerol-3-phosphate dehydrogenase [NAD(P)+]	NA	NA	NA	NA	NA
SQF76806.1|2017410_2018325_+	UTP--glucose-1-phosphate uridylyltransferase (UDP-glucose pyrophosphorylase) (UDPGP) (Alpha-D-glucosyl-1-phosphate uridylyltransferase) (Uridine diphosphoglucose pyrophosphorylase)	NA	A0A127AW70	Bacillus_phage	51.9	2.8e-76
SQF76807.1|2018370_2019045_-	peptidase, S54 family	NA	NA	NA	NA	NA
SQF76808.1|2019035_2019563_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
SQF76809.1|2019631_2020765_-	aminoacylase/N-acyl-L-amino acid amidohydrolase/hippurate hydrolase	NA	NA	NA	NA	NA
SQF76810.1|2020842_2021541_-	2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase	NA	NA	NA	NA	NA
SQF76811.1|2021626_2022379_-	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
SQF76812.1|2022492_2023332_-	methyltransferase domain protein	NA	NA	NA	NA	NA
SQF76813.1|2023752_2023911_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
SQF76814.1|2023930_2024098_+|bacteriocin	class IIb bacteriocin, lactobin A/cerein 7B family	bacteriocin	NA	NA	NA	NA
SQF76815.1|2024145_2024400_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76816.1|2024485_2025004_-|tRNA	tRNA-specific adenosine deaminase	tRNA	NA	NA	NA	NA
SQF76817.1|2025773_2026166_-	single-strand binding protein	NA	A1EAD1	Streptococcus_phage	47.0	7.5e-26
SQF76818.1|2026593_2027271_-|protease	CAAX amino protease family protein	protease	NA	NA	NA	NA
SQF76819.1|2027536_2028160_-	emap domain protein	NA	NA	NA	NA	NA
SQF76820.1|2028191_2028716_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF76821.1|2028719_2029034_-	thioredoxin	NA	NA	NA	NA	NA
SQF76822.1|2029030_2029315_-	membrane protein	NA	NA	NA	NA	NA
SQF76823.1|2029414_2030482_+	glutamyl aminopeptidase	NA	NA	NA	NA	NA
SQF76824.1|2030497_2031268_+	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	36.1	5.6e-33
SQF76825.1|2031294_2031957_-|protease	CAAX amino protease family protein	protease	NA	NA	NA	NA
>prophage 15
LS483366	Streptococcus salivarius strain NCTC7366 genome assembly, chromosome: 1	2184782	2162266	2173700	2184782		Staphylococcus_phage(25.0%)	12	NA	NA
SQF76966.1|2162266_2162965_-	immunodominant antigen A precursor	NA	Q4Z8Z7	Staphylococcus_phage	68.8	2.1e-26
SQF76967.1|2163148_2163730_-	LysM domain-containing protein	NA	A0A249XZV3	Enterococcus_phage	54.1	4.6e-24
SQF76968.1|2164030_2164825_-	cobalt ABC transporter permease CbiQ-like protein	NA	NA	NA	NA	NA
SQF76969.1|2164817_2165660_-	cobalt import ATP-binding protein CbiO 1	NA	A0A2H4PQG7	Staphylococcus_phage	27.9	1.8e-13
SQF76970.1|2165635_2166466_-	cobalt import ATP-binding protein CbiO 2	NA	G9BWD6	Planktothrix_phage	32.7	1.8e-21
SQF76971.1|2166478_2167021_-	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
SQF76972.1|2167033_2167891_-	XRE-family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
SQF76973.1|2167949_2169227_-	peptidase	NA	A0A2H4UVM3	Bodo_saltans_virus	28.7	1.3e-05
SQF76974.1|2169228_2170479_-	peptidase M16 inactive domain protein	NA	A0A1X9I714	Streptococcus_phage	39.9	2.5e-91
SQF76975.1|2170556_2170934_+	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	71.1	2.0e-23
SQF76976.1|2170936_2172037_+	DNA replication and repair protein RecF	NA	NA	NA	NA	NA
SQF76977.1|2172218_2173700_-	inositol-5-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.3	2.6e-95
