The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	36591	48953	1796043		Synechococcus_phage(28.57%)	8	NA	NA
SQF31906.1|36591_40365_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.9	4.6e-40
SQF31907.1|40525_41980_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.1	1.7e-54
SQF31908.1|42007_43030_+	phosphoribosylaminoimidazole synthetase	NA	R9TMC7	Synechococcus_phage	42.1	2.4e-63
SQF31909.1|43197_43752_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	6.8e-25
SQF31910.1|43935_45483_+	IMP cyclohydrolase / Phosphoribosylaminoimidazolecarboxamide formyltransferase	NA	E3SNU8	Prochlorococcus_phage	52.4	4.4e-45
SQF31911.1|45541_46666_-	bacterial SH3 domain protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
SQF31912.1|46828_48184_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
SQF31913.1|48341_48953_+	phosphoribosyl carboxyaminoimidazole mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	4.0e-18
>prophage 2
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	986980	1043257	1796043	terminase,portal,tail,integrase,protease	Streptococcus_phage(72.22%)	70	998274:998295	1040483:1040504
SQF32788.1|986980_987307_-|protease	protease	protease	NA	NA	NA	NA
SQF32789.1|987336_988122_-	acetyl esterase	NA	NA	NA	NA	NA
SQF32790.1|988254_989916_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
SQF32791.1|990119_990878_-	spermidine/putrescine import ATP-binding protein potA	NA	A0A1V0SE00	Indivirus	28.3	5.9e-11
SQF32792.1|990874_991744_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SQF32793.1|991920_992085_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF32794.1|992089_993088_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SQF32795.1|993441_995094_+	fibronectin-binding protein	NA	A0A1J0F9J4	Only_Syngen_Nebraska_virus	41.0	1.7e-07
SQF32796.1|995152_996400_-	Tetratricopeptide repeat family protein	NA	NA	NA	NA	NA
SQF32797.1|996389_997571_-	permease	NA	NA	NA	NA	NA
SQF32798.1|997628_998105_-	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA	NA
998274:998295	attL	AAAGAACCTTGTCATATCAACG	NA	NA	NA	NA
SQF32799.1|998708_999419_-	exotoxin H precursor	NA	NA	NA	NA	NA
SQF32800.1|999444_1000224_-	exotoxin I precursor	NA	A0A075M4C7	Staphylococcus_phage	32.7	9.3e-28
SQF32801.1|1000395_1001730_-	Phage lysin, N-acetylmuramoyl-L-alanine amidase	NA	Q5MY96	Streptococcus_phage	93.0	1.3e-247
SQF32802.1|1001730_1001838_-	phage membrane protein	NA	A7J2B4	Streptococcus_phage	97.1	5.5e-08
SQF32803.1|1001841_1002027_-	phage protein	NA	Q938J5	Temperate_phage	95.1	1.9e-24
SQF32804.1|1002023_1002320_-	phage protein	NA	Q938J6	Temperate_phage	98.0	3.7e-46
SQF32805.1|1002329_1002941_-	phage protein	NA	Q938J7	Temperate_phage	95.1	1.7e-85
SQF32806.1|1002943_1003372_-	phage protein	NA	Q938J8	Temperate_phage	82.9	4.0e-57
SQF32807.1|1003380_1005264_-	gp58-like family protein	NA	Q938J9	Temperate_phage	75.9	4.5e-185
SQF32808.1|1005278_1006394_-	hyaluronoglucosaminidase	NA	Q938K0	Temperate_phage	74.9	1.6e-142
SQF32809.1|1006390_1008370_-	phage protein	NA	A7J2A7	Streptococcus_phage	92.8	0.0e+00
SQF32810.1|1008379_1009222_-	phage protein	NA	A7J2A6	Streptococcus_phage	97.5	2.5e-156
SQF32811.1|1009233_1013616_-|tail	phage minor tail protein	tail	A7J2A5	Streptococcus_phage	75.9	3.0e-224
SQF32812.1|1013630_1013864_-	phage protein	NA	A7J2A4	Streptococcus_phage	97.4	6.4e-33
SQF32813.1|1013938_1014394_-	phage protein	NA	A7J2A3	Streptococcus_phage	98.7	1.2e-75
SQF32814.1|1014447_1015047_-|tail	phage major tail protein	tail	A7J2A2	Streptococcus_phage	97.1	1.7e-90
SQF32815.1|1015058_1015418_-	phage protein	NA	A7J2A1	Streptococcus_phage	98.3	1.2e-57
SQF32816.1|1015421_1015766_-	phage protein	NA	A7J2A0	Streptococcus_phage	98.2	5.1e-55
SQF32817.1|1015762_1016041_-	phage protein	NA	A7J299	Streptococcus_phage	100.0	1.9e-47
SQF32818.1|1016051_1016408_-	phage protein	NA	A7J298	Streptococcus_phage	100.0	4.6e-59
SQF32819.1|1016419_1017307_-	phage protein	NA	A7J297	Streptococcus_phage	100.0	2.1e-161
SQF32820.1|1017319_1017889_-	phage protein	NA	A7J296	Streptococcus_phage	99.5	7.4e-83
SQF32821.1|1018056_1018323_-	putative phage associated protein	NA	Q938K9	Temperate_phage	95.5	1.1e-36
SQF32822.1|1018327_1018444_-	phage membrane protein	NA	A7J294	Streptococcus_phage	100.0	2.0e-08
SQF32823.1|1018543_1019992_-	phage protein	NA	A7J293	Streptococcus_phage	99.6	1.3e-277
SQF32824.1|1019951_1020932_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	99.4	6.3e-183
SQF32825.1|1020957_1021485_-|portal	phage portal protein	portal	A7J292	Streptococcus_phage	93.0	5.1e-86
SQF32826.1|1021500_1022778_-|terminase	terminase large subunit	terminase	A7J291	Streptococcus_phage	98.4	1.4e-243
SQF32827.1|1022767_1023220_-|terminase	phage terminase small subunit	terminase	A7J290	Streptococcus_phage	99.3	1.5e-75
SQF32828.1|1023309_1023726_-	phage protein	NA	A7J289	Streptococcus_phage	100.0	6.6e-73
SQF32829.1|1023722_1023914_-	phage protein	NA	NA	NA	NA	NA
SQF32830.1|1024064_1024331_-	phage protein	NA	A7J287	Streptococcus_phage	62.9	3.5e-19
SQF32831.1|1024327_1024495_-	phage protein	NA	A7J285	Streptococcus_phage	94.5	1.9e-23
SQF32832.1|1024495_1025818_-	SNF2 family phage protein	NA	A7J284	Streptococcus_phage	97.3	7.3e-251
SQF32833.1|1025814_1026090_-	phage protein	NA	A7J283	Streptococcus_phage	97.8	1.3e-45
SQF32834.1|1026456_1028841_-	phage DNA primase/helicase protein	NA	A7J282	Streptococcus_phage	98.0	2.6e-286
SQF32835.1|1028845_1030768_-	phage DNA polymerase	NA	A7J280	Streptococcus_phage	98.8	0.0e+00
SQF32836.1|1030810_1031368_-	phage protein	NA	D2J040	Enterococcus_phage	58.5	3.3e-51
SQF32837.1|1031382_1032540_-	phage protein	NA	A7J278	Streptococcus_phage	98.2	1.0e-216
SQF32838.1|1032539_1032839_-	phage protein	NA	A7J277	Streptococcus_phage	97.0	2.8e-41
SQF32839.1|1032927_1033131_-	phage protein	NA	A7J276	Streptococcus_phage	91.0	1.3e-29
SQF32840.1|1033140_1033278_-	phage protein	NA	NA	NA	NA	NA
SQF32841.1|1033274_1033553_-	phage protein	NA	A7J274	Streptococcus_phage	94.6	2.5e-44
SQF32842.1|1033528_1033660_-	phage protein	NA	A7J274	Streptococcus_phage	78.6	2.4e-05
SQF32843.1|1033656_1033860_-	phage protein	NA	NA	NA	NA	NA
SQF32844.1|1033852_1034023_-	phage protein	NA	A7J273	Streptococcus_phage	89.3	1.2e-20
SQF32845.1|1034024_1034336_-	phage protein	NA	A1EAC3	Streptococcus_phage	85.3	1.4e-48
SQF32846.1|1034442_1034655_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF32847.1|1034581_1034749_-	phage protein	NA	NA	NA	NA	NA
SQF32848.1|1034752_1035472_-	phage antirepressor family protein	NA	M1Q1T4	Streptococcus_phage	70.3	7.4e-88
SQF32849.1|1035499_1035712_-	phage family protein	NA	J7KBP9	Streptococcus_phage	95.7	9.2e-31
SQF32850.1|1035909_1036251_+	phage repressor protein	NA	J7KJZ4	Streptococcus_phage	85.8	1.2e-48
SQF32851.1|1036234_1036618_+	cI-like repressor	NA	A0A1P8VVK5	Streptococcus_phage	76.0	1.2e-52
SQF32852.1|1036619_1038284_+	prophage Lp2 protein 4	NA	NA	NA	NA	NA
SQF32853.1|1038322_1039180_+	Site-specific DNA methylase	NA	A0A2H4UUI2	Bodo_saltans_virus	29.7	8.1e-17
SQF32854.1|1039299_1040439_+|integrase	phage integrase	integrase	A1EAB7	Streptococcus_phage	56.3	1.2e-119
SQF32855.1|1040510_1041551_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	43.9	1.1e-68
1040483:1040504	attR	CGTTGATATGACAAGGTTCTTT	NA	NA	NA	NA
SQF32856.1|1041794_1042388_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	28.2	3.7e-08
SQF32857.1|1042387_1043257_-	glucose-1-phosphate thymidyl transferase	NA	K7QKA7	Escherichia_phage	64.6	2.4e-101
>prophage 3
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	1053935	1109009	1796043	protease,tRNA,head,transposase	Bacillus_phage(28.57%)	52	NA	NA
SQF32869.1|1053935_1054835_-|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
SQF32870.1|1054968_1055145_+	putative uncharacterized protein ORF 3	NA	NA	NA	NA	NA
SQF32871.1|1055262_1056171_-	exfoliative toxin	NA	NA	NA	NA	NA
SQF32872.1|1056229_1056616_-	glutathione S-transferase	NA	NA	NA	NA	NA
SQF32873.1|1056926_1057913_-	Rhodanese domain protein UPF0176, Firmicutes subgroup	NA	NA	NA	NA	NA
SQF32874.1|1058113_1058416_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF32875.1|1058962_1060168_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
SQF32876.1|1060557_1060788_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SQF32877.1|1060851_1061874_-	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SQF32878.1|1061996_1064420_-	topoisomerase IV subunit	NA	G3M9Z5	Bacillus_virus	33.2	1.0e-96
SQF32879.1|1064546_1066496_-	topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	41.8	2.1e-121
SQF32880.1|1066630_1067272_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SQF32881.1|1067329_1068598_-	dihydroorotase	NA	NA	NA	NA	NA
SQF32882.1|1068729_1069383_-	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	40.5	8.0e-41
SQF32883.1|1069515_1070166_-	amino-acid ABC transporter permease yckA	NA	NA	NA	NA	NA
SQF32884.1|1070194_1071058_-	cystine-binding protein	NA	NA	NA	NA	NA
SQF32885.1|1071175_1072630_-	amidase	NA	NA	NA	NA	NA
SQF32886.1|1072826_1073456_-	orotate phosphoribosyltransferase	NA	NA	NA	NA	NA
SQF32887.1|1073513_1074206_-	orotidine 5'-phosphate decarboxylase	NA	NA	NA	NA	NA
SQF32888.1|1074482_1075019_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF32889.1|1075240_1076146_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SQF32890.1|1076225_1077014_-	LytR family transcriptional regulator	NA	NA	NA	NA	NA
SQF32891.1|1077006_1077720_-	Purine nucleoside phosphorylase	NA	NA	NA	NA	NA
SQF32892.1|1078385_1079195_-	purine nucleoside phosphorylase	NA	Q5YBA4	Grouper_iridovirus	42.2	1.1e-52
SQF32893.1|1079178_1079619_-	arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	55.3	5.8e-35
SQF32894.1|1079637_1080849_-	phosphopentomutase	NA	NA	NA	NA	NA
SQF32895.1|1080925_1081609_-	ribose-5-phosphate isomerase A	NA	NA	NA	NA	NA
SQF32896.1|1081987_1084087_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	H6X3M6	Enterobacteria_phage	39.2	5.1e-121
SQF32897.1|1084144_1084888_-	virulence factor relevant regulator	NA	NA	NA	NA	NA
SQF32898.1|1085035_1085635_-	ribosome biogenesis GTP-binding protein YsxC	NA	NA	NA	NA	NA
SQF32899.1|1085644_1086874_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	60.5	7.8e-138
SQF32900.1|1087003_1087174_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF32901.1|1087193_1087691_-	dihydrofolate reductase	NA	W5QU76	Bacillus_phage	34.4	8.6e-11
SQF32902.1|1087770_1088610_-	thymidylate synthase	NA	U5J9N5	Bacillus_phage	53.2	1.7e-83
SQF32903.1|1088818_1089994_+	hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
SQF32904.1|1089980_1091258_+	hydroxymethylglutaryl-CoA reductase, degradative	NA	NA	NA	NA	NA
SQF32905.1|1091487_1092477_-	isopentenyl pyrophosphate isomerase	NA	NA	NA	NA	NA
SQF32906.1|1092463_1093477_-	phosphomevalonate kinase	NA	NA	NA	NA	NA
SQF32907.1|1093469_1094414_-	diphosphomevalonate decarboxylase	NA	NA	NA	NA	NA
SQF32908.1|1094395_1095274_-	mevalonate kinase	NA	NA	NA	NA	NA
SQF32909.1|1095566_1096799_-	two component system histidine kinase	NA	NA	NA	NA	NA
SQF32910.1|1096807_1097476_-	two-component response regulator	NA	W8CYM9	Bacillus_phage	28.8	2.3e-19
SQF32911.1|1097478_1098129_-	GTP pyrophosphokinase	NA	NA	NA	NA	NA
SQF32912.1|1098348_1100361_+	5'-nucleotidase	NA	NA	NA	NA	NA
SQF32913.1|1100442_1100853_-	polypeptide deformylase family protein	NA	E3SLL2	Synechococcus_phage	30.6	6.9e-06
SQF32914.1|1101745_1103623_-	ABC transporter ATP-binding protein	NA	A0A2K9L3Z8	Tupanvirus	31.3	8.7e-64
SQF32915.1|1103619_1104828_-|head	poly A polymerase head domain-containing protein	head	H7BUW3	unidentified_phage	45.5	4.8e-39
SQF32916.1|1104952_1105801_-	degV family protein	NA	NA	NA	NA	NA
SQF32917.1|1105800_1106181_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF32918.1|1106408_1106585_-	nucleoside diphosphate kinase	NA	NA	NA	NA	NA
SQF32919.1|1107083_1108109_+|protease	igG-degrading protease	protease	NA	NA	NA	NA
SQF32920.1|1108790_1109009_+|transposase	degenerate transposase	transposase	A0A1B1P773	Bacillus_phage	55.9	2.7e-09
>prophage 4
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	1145276	1155881	1796043		Streptococcus_phage(57.14%)	9	NA	NA
SQF32954.1|1145276_1146419_-	aminotransferase class-V family protein	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.1e-24
SQF32955.1|1146653_1147094_+	membrane protein	NA	NA	NA	NA	NA
SQF32956.1|1147123_1148401_+	folylpolyglutamate synthase	NA	NA	NA	NA	NA
SQF32957.1|1148480_1149833_-	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.4	3.5e-30
SQF32958.1|1150054_1150396_-	hypothetical cytosolic protein	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
SQF32959.1|1150456_1151623_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
SQF32960.1|1151716_1152403_-	3-dehydroquinate dehydratase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
SQF32961.1|1152399_1153563_-	SAM-dependent methyltransferase	NA	W6LLI2	Streptococcus_phage	65.1	3.4e-143
SQF32962.1|1153670_1155881_+	phosphoglycerol transferase	NA	W6LM83	Streptococcus_phage	68.8	3.2e-267
>prophage 5
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	1191292	1231928	1796043	protease,tRNA,transposase,bacteriocin	Tupanvirus(20.0%)	31	NA	NA
SQF32995.1|1191292_1193698_-|tRNA	phenylalanyl-tRNA synthetase subunit beta	tRNA	NA	NA	NA	NA
SQF32996.1|1193907_1194951_-|tRNA	phenylalanyl-tRNA synthetase alpha subunit	tRNA	A0A2K9L3A8	Tupanvirus	34.3	4.6e-30
SQF32997.1|1195218_1195314_-	hupothetical protein	NA	NA	NA	NA	NA
SQF32998.1|1195318_1196452_-|transposase	transposase	transposase	NA	NA	NA	NA
SQF32999.1|1196505_1196991_-	DNA/RNA non-specific endonuclease family protein	NA	NA	NA	NA	NA
SQF33000.1|1197176_1197365_-	epuA protein	NA	NA	NA	NA	NA
SQF33001.1|1197368_1198640_-	UDP-N-acetylglucosamine 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQF33002.1|1198704_1198962_-	membrane protein	NA	NA	NA	NA	NA
SQF33003.1|1199227_1199644_-	F0F1 ATP synthase subunit epsilon	NA	NA	NA	NA	NA
SQF33004.1|1199656_1201063_-	F0F1 ATP synthase subunit beta	NA	NA	NA	NA	NA
SQF33005.1|1201224_1202100_-	F0F1 ATP synthase subunit gamma	NA	NA	NA	NA	NA
SQF33006.1|1202115_1203624_-	F0F1 ATP synthase subunit alpha	NA	NA	NA	NA	NA
SQF33007.1|1203639_1204176_-	ATP synthase delta chain	NA	NA	NA	NA	NA
SQF33008.1|1204175_1204670_-	F0F1 ATP synthase subunit B	NA	NA	NA	NA	NA
SQF33009.1|1204687_1205404_-	F0F1 ATP synthase subunit A	NA	NA	NA	NA	NA
SQF33010.1|1205438_1205636_-	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
SQF33011.1|1206027_1207050_-	lipid kinase	NA	A0A1V0SBJ0	Catovirus	27.9	3.6e-19
SQF33012.1|1207063_1209022_-	NAD-dependent DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	34.9	5.8e-103
SQF33013.1|1209993_1212726_-	LPXTG-motif cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
SQF33014.1|1213297_1214416_-	ABC transporter	NA	NA	NA	NA	NA
SQF33015.1|1214412_1215540_-	ABC transporter	NA	NA	NA	NA	NA
SQF33016.1|1215548_1216472_-	ABC transporter family protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	38.1	6.7e-33
SQF33017.1|1216494_1217178_-	streptolysin S biosynthesis protein SagF	NA	NA	NA	NA	NA
SQF33018.1|1217174_1217846_-|protease	CAAX amino terminal protease family protein	protease	NA	NA	NA	NA
SQF33019.1|1217820_1219179_-|bacteriocin	bacteriocin biosynthesis docking scaffold, SagD family domain-containing protein	bacteriocin	NA	NA	NA	NA
SQF33020.1|1219198_1220257_-|bacteriocin	bacteriocin biosynthesis cyclodehydratase	bacteriocin	NA	NA	NA	NA
SQF33021.1|1220253_1221204_-	sagB-type dehydrogenase domain-containing protein	NA	NA	NA	NA	NA
SQF33022.1|1221425_1221587_-|bacteriocin	bacteriocin protoxin, streptolysin S family protein	bacteriocin	NA	NA	NA	NA
SQF33023.1|1222451_1228619_-	extracellular matrix binding protein	NA	NA	NA	NA	NA
SQF33024.1|1229090_1230632_+	MgaA-like transcriptional regulator	NA	NA	NA	NA	NA
SQF33025.1|1231238_1231928_+|transposase	transposase	transposase	A0A1X9I619	Streptococcus_phage	79.4	1.3e-94
>prophage 6
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	1386522	1423534	1796043	protease,transposase,bacteriocin	Streptococcus_phage(22.22%)	45	NA	NA
SQF33172.1|1386522_1386750_-|bacteriocin	bacteriocin	bacteriocin	NA	NA	NA	NA
SQF33173.1|1387067_1387490_+|transposase	transposase	transposase	NA	NA	NA	NA
SQF33174.1|1387486_1387636_+|transposase	IS1191 transposase	transposase	NA	NA	NA	NA
SQF33175.1|1387802_1388057_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF33176.1|1388362_1388839_-	phosphohydrolase	NA	NA	NA	NA	NA
SQF33177.1|1388858_1389755_-	GTP-binding protein Era	NA	NA	NA	NA	NA
SQF33178.1|1389874_1390282_-	diacylglycerol kinase	NA	NA	NA	NA	NA
SQF33179.1|1390262_1390760_-|protease	metalloprotease	protease	NA	NA	NA	NA
SQF33180.1|1390918_1391494_-	uracil DNA glycosylase superfamily protein	NA	NA	NA	NA	NA
SQF33181.1|1391539_1392592_-	phosphate starvation-induced protein	NA	W8D063	Erwinia_phage	50.0	1.2e-46
SQF33182.1|1392750_1394523_-	myosin-cross-reactive antigen	NA	NA	NA	NA	NA
SQF33183.1|1394838_1396020_-	lysM domain protein	NA	A0A0E3XB61	Gordonia_phage	40.5	5.6e-16
SQF33184.1|1396175_1396391_-	hypothetical cytosolic protein	NA	NA	NA	NA	NA
SQF33185.1|1396387_1396897_-	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SQF33186.1|1396969_1397827_-	s1 RNA binding domain	NA	NA	NA	NA	NA
SQF33187.1|1397935_1398493_-	ribosome recycling factor	NA	NA	NA	NA	NA
SQF33188.1|1398522_1399251_-	uridylate kinase	NA	NA	NA	NA	NA
SQF33189.1|1399573_1400263_-	50S ribosomal protein L1	NA	NA	NA	NA	NA
SQF33190.1|1400368_1400794_-	50S ribosomal protein L11	NA	NA	NA	NA	NA
SQF33191.1|1401037_1401391_+	integral membrane protein	NA	NA	NA	NA	NA
SQF33192.1|1401460_1403866_-	cell division protein FtsK	NA	S5VNE3	Mycobacterium_phage	51.7	3.8e-88
SQF33193.1|1404082_1404889_+	cyclophilin type peptidyl-prolyl cis-trans isomerase	NA	A0A2H4UTF4	Bodo_saltans_virus	36.6	1.5e-20
SQF33194.1|1405036_1405891_-	ABC 3 transport family protein	NA	NA	NA	NA	NA
SQF33195.1|1405891_1406617_-	manganese transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	32.6	1.4e-17
SQF33196.1|1406680_1407613_-	manganese-binding protein	NA	NA	NA	NA	NA
SQF33197.1|1407758_1408406_+	metalloregulator ScaR	NA	NA	NA	NA	NA
SQF33198.1|1408504_1408846_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF33199.1|1408996_1409692_-	MTA/SAH nucleosidase	NA	NA	NA	NA	NA
SQF33200.1|1409711_1409963_-	membrane protein	NA	NA	NA	NA	NA
SQF33201.1|1409962_1410517_-	ADP-ribose pyrophosphatase	NA	NA	NA	NA	NA
SQF33202.1|1410547_1411930_-	bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase	NA	A0A2K9L4K9	Tupanvirus	36.0	8.5e-32
SQF33203.1|1412102_1413440_-	phosphoglycerate transporter protein	NA	NA	NA	NA	NA
SQF33204.1|1413771_1414731_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SQF33205.1|1414806_1415505_-	3-ketoacyl-ACP reductase	NA	A0A0N9R355	Chrysochromulina_ericina_virus	25.2	3.5e-10
SQF33206.1|1415497_1415734_-	Protein of uncharacterised function (DUF2829)	NA	NA	NA	NA	NA
SQF33207.1|1416094_1416727_+	phage protein	NA	NA	NA	NA	NA
SQF33208.1|1416820_1417072_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQF33209.1|1417303_1417843_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF33210.1|1418013_1418313_-	hypothetical membrane spanning protein	NA	NA	NA	NA	NA
SQF33211.1|1418553_1418958_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF33212.1|1419384_1419870_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF33213.1|1420191_1420386_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF33214.1|1420386_1420800_+|transposase	transposase, ISSmu2	transposase	A0A1S5SBP9	Streptococcus_phage	44.3	1.8e-22
SQF33215.1|1421987_1422407_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF33216.1|1422874_1423534_+|transposase	truncated transposase	transposase	A0A1X9I5T2	Streptococcus_phage	91.3	3.8e-115
>prophage 7
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	1440757	1446791	1796043		Streptococcus_phage(100.0%)	8	NA	NA
SQF33226.1|1440757_1441585_+	3'-exo-deoxyribonuclease	NA	M1PSC0	Streptococcus_phage	79.1	8.4e-128
SQF33227.1|1441658_1442015_-	arsenate reductase	NA	M1PLC0	Streptococcus_phage	65.0	1.8e-39
SQF33228.1|1442313_1442943_+	copper homeostasis protein	NA	NA	NA	NA	NA
SQF33229.1|1442989_1443382_-	hypothetical membrane associated protein	NA	NA	NA	NA	NA
SQF33230.1|1443408_1444272_-	corrin/porphyrin methyltransferase	NA	M1PLC5	Streptococcus_phage	74.3	2.7e-113
SQF33231.1|1444276_1444600_-	DNA replication initiation control protein	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
SQF33232.1|1445262_1446138_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	43.8	7.7e-63
SQF33233.1|1446155_1446791_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
>prophage 8
LS483345	Streptococcus pyogenes strain NCTC8231 genome assembly, chromosome: 1	1796043	1714082	1736910	1796043	tRNA	Streptococcus_phage(44.44%)	28	NA	NA
SQF33471.1|1714082_1715303_-	transporter	NA	A0A2H4PQR6	Staphylococcus_phage	23.7	7.8e-05
SQF33472.1|1715313_1717296_-	DNA mismatch repair protein	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	3.0e-62
SQF33473.1|1717390_1718536_-	DNA integration/recombination/inversion protein	NA	A0A1X9I5Y5	Streptococcus_phage	45.6	6.5e-86
SQF33474.1|1718793_1719648_-	DNA-damage-inducible protein D	NA	A0A1W6JPJ7	Morganella_phage	52.5	1.0e-56
SQF33475.1|1719908_1720070_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF33476.1|1720460_1721228_-	repressor protein	NA	Q76TK4	Streptococcus_pyogenes_phage	83.1	3.6e-72
SQF33477.1|1721381_1721588_+	Cro/CI family phage transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	2.4e-07
SQF33478.1|1721621_1722389_+	BRO family, N-terminal domain protein	NA	A0A0A7S0G2	Clostridium_phage	53.7	5.0e-26
SQF33479.1|1722398_1723016_+	phage antirepressor protein	NA	A0A2H4JB17	uncultured_Caudovirales_phage	44.0	5.8e-41
SQF33480.1|1723015_1723285_+	Prophage antirepressor	NA	NA	NA	NA	NA
SQF33481.1|1723541_1723874_+	phage protein	NA	NA	NA	NA	NA
SQF33482.1|1723870_1724065_+	phage protein	NA	NA	NA	NA	NA
SQF33483.1|1724076_1724439_+	phage protein	NA	NA	NA	NA	NA
SQF33484.1|1724435_1724744_+	phage protein	NA	NA	NA	NA	NA
SQF33485.1|1724746_1725019_+	Uncharacterised protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	4.7e-19
SQF33486.1|1725019_1725886_+	replication protein	NA	A0A1X9I6L2	Streptococcus_phage	73.1	1.4e-120
SQF33487.1|1725897_1727292_+	Predicted P-loop ATPase and inactivated derivatives	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
SQF33488.1|1727585_1727840_+	phage protein	NA	NA	NA	NA	NA
SQF33489.1|1727836_1728010_+	phage protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	8.6e-11
SQF33490.1|1728190_1728700_+	phage protein	NA	A0A1X9I5U4	Streptococcus_phage	62.5	4.2e-29
SQF33491.1|1728773_1729262_+	phage protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	2.4e-45
SQF33492.1|1729665_1730028_+	phage protein	NA	A0A2H4JFS1	uncultured_Caudovirales_phage	29.9	8.7e-05
SQF33493.1|1730002_1730386_+	phage protein	NA	J7KDQ1	Streptococcus_phage	40.2	8.4e-14
SQF33494.1|1730586_1731204_+	phage protein	NA	NA	NA	NA	NA
SQF33495.1|1731599_1734155_-	DNA mismatch repair protein mutS	NA	A0A1V0SGG8	Hokovirus	22.8	1.8e-43
SQF33496.1|1734141_1734348_-	cytoplasmic protein	NA	NA	NA	NA	NA
SQF33497.1|1734490_1734928_-	arginine repressor	NA	NA	NA	NA	NA
SQF33498.1|1735218_1736910_+|tRNA	arginyl-tRNA synthetase	tRNA	A0A2I2L3K1	Orpheovirus	32.4	7.1e-73
