The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	12234	70029	2835275	bacteriocin,transposase,tRNA	Staphylococcus_phage(33.33%)	53	NA	NA
SQE98584.1|12234_13521_+|tRNA	Seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	51.2	2.7e-88
SQE98585.1|14171_14867_+	AzlC	NA	NA	NA	NA	NA
SQE98586.1|14863_15193_+	branched-chain amino acid transport family protein	NA	NA	NA	NA	NA
SQE98587.1|15555_16524_+	Homoserine O-acetyltransferase	NA	NA	NA	NA	NA
SQE98588.1|16832_17756_+	Predicted membrane protein	NA	NA	NA	NA	NA
SQE98589.1|17770_19738_+	phosphoesterase, DHH family protein	NA	NA	NA	NA	NA
SQE98590.1|19734_20181_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
SQE98591.1|20212_21613_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	48.1	5.4e-111
SQE98592.1|21890_23174_+	adenylosuccinate synthase	NA	L7Y4J5	Megavirus	34.6	1.8e-68
SQE98593.1|24376_25078_+	Two-component response regulator	NA	W8CYM9	Bacillus_phage	39.2	3.5e-42
SQE98594.1|25090_26917_+	two-component sensor histidine kinase	NA	W8CYF6	Bacillus_phage	31.3	1.6e-30
SQE98595.1|26909_28244_+	YycH protein	NA	NA	NA	NA	NA
SQE98596.1|28244_29033_+	yycH family protein	NA	NA	NA	NA	NA
SQE98597.1|29428_30229_+	Zn-dependent hydrolase (beta-lactamase superfamily)	NA	A0A0C5AJ83	Bacteriophage	35.9	1.0e-37
SQE98598.1|30456_32775_+	5'-nucleotidase	NA	NA	NA	NA	NA
SQE98599.1|33142_33622_+	LSU m3Psi1915 methyltransferase RlmH	NA	NA	NA	NA	NA
SQE98600.1|34137_34650_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE98601.1|34888_35404_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE98602.1|35598_36249_-	alkylmercury lyase MerB	NA	NA	NA	NA	NA
SQE98603.1|36330_37974_-	Mercuric reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	29.4	1.7e-50
SQE98604.1|38031_38367_-	mercuric transporter	NA	NA	NA	NA	NA
SQE98605.1|38504_39185_-	Mercury transport protein	NA	NA	NA	NA	NA
SQE98606.1|39181_39535_-	AhpC/TSA family protein	NA	NA	NA	NA	NA
SQE98607.1|39551_39959_-	mercuric resistance operon regulatory protein MerR	NA	NA	NA	NA	NA
SQE98608.1|40258_41605_-	regulatory protein	NA	NA	NA	NA	NA
SQE98609.1|41887_42562_+	Transposase for insertion sequence-like element IS431mec	NA	A0A0N9RU54	Staphylococcus_phage	99.1	2.0e-127
SQE98610.1|42719_43244_+	replication initiation protein	NA	NA	NA	NA	NA
SQE98611.1|43373_43553_+	putative replication initiation protein Rep domain protein	NA	NA	NA	NA	NA
SQE98612.1|44137_44326_+	membrane protein	NA	NA	NA	NA	NA
SQE98613.1|44342_44483_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE98614.1|44986_45418_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE98615.1|46143_46311_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE98616.1|46873_47692_-|transposase	transposase (pseudogene)	transposase	NA	NA	NA	NA
SQE98617.1|48087_52281_+	putative biofilm-associated protein	NA	NA	NA	NA	NA
SQE98618.1|52692_52983_+|transposase	transposase (pseudogene)	transposase	NA	NA	NA	NA
SQE98619.1|53050_53791_-|transposase	IS1181 transposase	transposase	NA	NA	NA	NA
SQE98620.1|54242_55214_-	quinone oxidoreductase, YhdH/YhfP family protein	NA	NA	NA	NA	NA
SQE98621.1|55337_55757_+	regulatory protein MarR	NA	NA	NA	NA	NA
SQE98622.1|56042_56618_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	51.7	2.9e-42
SQE98623.1|56884_58930_+	cation exporting ATPase	NA	E4ZFI9	Streptococcus_phage	29.2	2.3e-65
SQE98624.1|58944_60378_+	multicopper oxidase	NA	NA	NA	NA	NA
SQE98625.1|60444_62091_-|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	98.2	1.3e-289
SQE98626.1|62453_64634_-	cadmium translocating P-type ATPase CadA, putative	NA	E4ZFI9	Streptococcus_phage	63.7	9.3e-251
SQE98627.1|64626_64992_-	cadmium efflux system repressor, putative	NA	E4ZFI8	Streptococcus_phage	47.8	8.5e-24
SQE98628.1|65229_65607_-	Transposase for transposon Tn554	NA	NA	NA	NA	NA
SQE98629.1|65701_66376_+|transposase	IS431 transposase	transposase	A0A0N9RU54	Staphylococcus_phage	88.4	1.3e-113
SQE98630.1|66410_66623_-	membrane protein	NA	NA	NA	NA	NA
SQE98631.1|66960_67278_+	recombinase	NA	NA	NA	NA	NA
SQE98632.1|67338_67653_+	arsenical resistance operon repressor	NA	A0A2H4PQT4	Staphylococcus_phage	73.1	4.7e-39
SQE98633.1|67652_67871_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	81.4	7.5e-20
SQE98634.1|67902_68943_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	81.5	8.0e-152
SQE98635.1|68960_69356_+	arsenate reductase	NA	A0A2H4PQT9	Staphylococcus_phage	86.3	8.5e-62
SQE98636.1|69735_70029_+|bacteriocin	bacteriocin, lactococcin 972 family protein	bacteriocin	NA	NA	NA	NA
>prophage 2
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	796180	804001	2835275		Hokovirus(16.67%)	10	NA	NA
SQE99302.1|796180_797236_-	Sensor histidine protein kinase SaeS (exoprotein expression protein S)	NA	A0A1V0SGX0	Hokovirus	29.8	3.6e-14
SQE99303.1|797235_797922_-	Response regulator SaeR	NA	NA	NA	NA	NA
SQE99304.1|797896_798370_-	DoxX family protein	NA	NA	NA	NA	NA
SQE99305.1|798712_799153_-	lipoprotein	NA	NA	NA	NA	NA
SQE99306.1|799432_800017_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99307.1|800115_800829_-	Queuosine Biosynthesis QueE Radical SAM	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
SQE99308.1|800832_801252_-	6-pyruvoyl-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
SQE99309.1|801253_801922_-	Queuosine Biosynthesis QueC ATPase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
SQE99310.1|802272_802866_+	Para-aminobenzoate synthase, amidotransferase component PabAb	NA	A0A0P0IKJ1	Acinetobacter_phage	43.5	1.2e-38
SQE99311.1|802849_804001_+	Para-aminobenzoate synthetase component I	NA	S4VNU7	Pandoravirus	36.1	3.5e-23
>prophage 3
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	815972	830702	2835275		uncultured_Caudovirales_phage(50.0%)	13	NA	NA
SQE99320.1|815972_817031_+	histidinol-phosphate aminotransferase	NA	A0A0H3TLT9	Faustovirus	27.3	1.5e-20
SQE99321.1|816904_817186_-	Protein of uncharacterised function (DUF3125)	NA	NA	NA	NA	NA
SQE99322.1|817325_817868_+	5'-3'-deoxyribonucleotidase, putative	NA	NA	NA	NA	NA
SQE99323.1|818547_819465_-	Transcription regulator (contains diacylglycerol kinase catalytic domain)	NA	A0A1V0SBJ0	Catovirus	22.0	2.1e-07
SQE99324.1|819733_821239_-	Di/tripeptide permease YjdL	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
SQE99325.1|821579_822080_-	NADPH dependent preQ0 reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
SQE99326.1|822099_822966_-	Integral membrane domain protein	NA	NA	NA	NA	NA
SQE99327.1|823766_824165_+	Nrdi	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
SQE99328.1|824127_826233_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
SQE99329.1|826350_827322_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
SQE99330.1|827987_829001_+	FatD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
SQE99331.1|828987_829944_+	Iron compound ABC uptake transporter permease protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
SQE99332.1|829940_830702_+	Iron compound ABC uptake transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 4
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	1074385	1082858	2835275		Synechococcus_phage(33.33%)	9	NA	NA
SQE99559.1|1074385_1074868_+	AIR carboxylase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
SQE99560.1|1074854_1075979_+	Phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
SQE99561.1|1075982_1076687_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
SQE99562.1|1076686_1076950_+	Phosphoribosylformylglycinamidine synthase, PurS subunit	NA	NA	NA	NA	NA
SQE99563.1|1076951_1077623_+	Phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
SQE99564.1|1077615_1079805_+	Phosphoribosylformylglycinamidine synthase, synthetase subunit	NA	A6N228	Microbacterium_phage	39.8	3.5e-141
SQE99565.1|1079783_1081268_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	1.9e-45
SQE99566.1|1081260_1082289_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.7	3.4e-62
SQE99567.1|1082291_1082858_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	1339330	1357279	2835275	integrase,portal,head,terminase	Staphylococcus_phage(54.17%)	34	1333054:1333071	1359270:1359287
1333054:1333071	attL	ATTCAATCATTAATATAT	NA	NA	NA	NA
SQE99798.1|1339330_1340458_-|integrase	integrase family protein	integrase	A0A0C5AN64	Paenibacillus_phage	31.4	6.2e-33
SQE99799.1|1340510_1341206_-	host cell surface-exposed lipofamily protein	NA	A0A2H4J5B8	uncultured_Caudovirales_phage	50.3	3.6e-07
SQE99800.1|1341217_1341601_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99801.1|1341747_1342140_-	helix-turn-helix family protein	NA	A0A2I6PE55	Staphylococcus_phage	53.6	1.6e-28
SQE99802.1|1342307_1342526_+	regulatory protein	NA	A0A2I6PE94	Staphylococcus_phage	62.5	4.9e-19
SQE99803.1|1342552_1342828_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99804.1|1342832_1342967_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99805.1|1342997_1343117_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99806.1|1343092_1343263_+	Uncharacterised protein	NA	Q4ZDZ8	Staphylococcus_virus	89.3	2.4e-21
SQE99807.1|1343251_1343458_-	Uncharacterised protein	NA	A1BTY8	Staphylococcus_virus	75.0	3.3e-25
SQE99808.1|1343518_1344202_+	prophage, antirepressor, putative	NA	A9CR56	Staphylococcus_phage	85.6	5.2e-107
SQE99809.1|1344300_1344462_+	phage protein	NA	R4IH12	Staphylococcus_phage	69.8	1.1e-12
SQE99810.1|1344548_1344866_+	phage protein	NA	W5RAK4	Staphylococcus_phage	80.6	1.6e-39
SQE99811.1|1344855_1345122_+	phage protein	NA	A0A2I6PDG2	Staphylococcus_phage	53.6	3.0e-18
SQE99812.1|1345126_1345663_+	glycosyl hydrolases 17 family protein	NA	A0A0H3U480	Staphylococcus_phage	82.5	1.7e-76
SQE99813.1|1345663_1346443_+	bacterial dnaA family protein	NA	A0A1W6JPW0	Staphylococcus_phage	88.0	2.3e-127
SQE99814.1|1346469_1347018_+	Single stranded DNA-binding protein,phage-associated	NA	A7TWM8	Staphylococcus_phage	92.9	1.1e-91
SQE99815.1|1347030_1347933_+	dnaD domain protein	NA	A0A1P8L6F0	Staphylococcus_phage	52.0	2.9e-49
SQE99816.1|1347933_1348224_+	PVL orf 51-like protein	NA	A0A223LIA9	Staphylococcus_phage	58.1	7.2e-18
SQE99817.1|1348238_1348403_+	phage protein	NA	A0A0E3T9L7	Staphylococcus_phage	88.9	1.1e-18
SQE99818.1|1348402_1348714_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99819.1|1348706_1349237_+	mazG nucleotide pyrophosphohydrolase domain protein	NA	A0A1P8VVP1	Streptococcus_phage	38.2	5.2e-22
SQE99820.1|1349482_1349947_+	Uncharacterised protein	NA	C9E2P0	Enterococcus_phage	43.0	3.2e-20
SQE99821.1|1349947_1350181_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99822.1|1350223_1350712_+	sigma-70, region 4 family protein	NA	R9TMH4	Paenibacillus_phage	27.7	4.3e-07
SQE99823.1|1350864_1351293_+	homeo-like domain protein	NA	A1EAE0	Streptococcus_phage	45.1	1.1e-25
SQE99824.1|1351279_1352554_+|terminase	phage terminase, large subunit, PBSX family	terminase	Q4ZE37	Staphylococcus_virus	76.4	1.9e-195
SQE99825.1|1352566_1354015_+|portal	phage portal protein, SPP1 family	portal	Q4ZE36	Staphylococcus_virus	69.4	7.4e-196
SQE99826.1|1354004_1355537_+|head	phage head morphogenesis, SPP1 gp7 family domain protein	head	Q4ZE35	Staphylococcus_virus	61.6	1.9e-109
SQE99827.1|1355542_1355665_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99828.1|1355824_1356037_+	Phage protein	NA	NA	NA	NA	NA
SQE99829.1|1356156_1356426_+	Phage protein	NA	NA	NA	NA	NA
SQE99830.1|1356438_1356561_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE99831.1|1356817_1357279_+	Uncharacterised protein	NA	A0A1J0MF61	Staphylococcus_phage	46.0	3.8e-29
1359270:1359287	attR	ATATATTAATGATTGAAT	NA	NA	NA	NA
>prophage 6
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	1634014	1642344	2835275	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
SQF00067.1|1634014_1634800_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
SQF00068.1|1634925_1635816_-	endonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	36.0	3.4e-26
SQF00069.1|1635825_1637172_-	ATP-dependent RNA helicase YqfR	NA	A0A1V0SIR5	Klosneuvirus	34.0	2.4e-55
SQF00070.1|1637285_1638386_-	NIF3 protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
SQF00071.1|1638388_1639066_-|tRNA	Putative tRNA-m1A22 methylase	tRNA	NA	NA	NA	NA
SQF00072.1|1639196_1640303_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
SQF00073.1|1640526_1642344_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.3	7.9e-54
>prophage 7
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	1710007	1719038	2835275	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
SQF00143.1|1710007_1710514_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	50.0	7.9e-28
SQF00144.1|1710535_1712809_-	Single-stranded-DNA-specific exonuclease recJ	NA	A7KV88	Bacillus_phage	28.8	5.2e-63
SQF00145.1|1713011_1715291_-	Protein-export membrane protein secD / Protein-export membrane protein secF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
SQF00146.1|1715565_1715826_-	Preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
SQF00147.1|1715844_1716984_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
SQF00148.1|1717006_1718032_-|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
SQF00149.1|1718033_1719038_-	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	1844395	1913059	2835275	protease,tRNA	Staphylococcus_phage(95.74%)	66	NA	NA
SQF00254.1|1844395_1850956_-	LPXTG-motif cell wall anchor domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	99.0	1.6e-309
SQF00255.1|1851281_1851593_-	Rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
SQF00256.1|1851614_1854032_-|tRNA	Leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.3	0.0e+00
SQF00257.1|1854319_1855501_-	Multidrug resistance protein	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
SQF00258.1|1855610_1856564_+	Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
SQF00259.1|1856560_1857124_+	SAM-dependent methyltransferase, MraW methylase family	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
SQF00260.1|1857243_1857645_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
SQF00261.1|1858216_1859044_-	Lysophospholipase; Monoglyceride lipase; putative	NA	NA	NA	NA	NA
SQF00262.1|1859277_1860279_+	Proline dehydrogenase (Proline oxidase)	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
SQF00263.1|1860400_1860865_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
SQF00264.1|1860877_1862059_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
SQF00265.1|1862069_1862702_-	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
SQF00266.1|1862708_1863752_-	5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	98.5	1.6e-195
SQF00267.1|1864232_1865735_-	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2H4PQX2	Staphylococcus_phage	98.6	1.9e-29
SQF00268.1|1866257_1866572_+	arsenical resistance operon repressor 2	NA	A0A2H4PQT4	Staphylococcus_phage	98.1	9.8e-53
SQF00269.1|1866571_1867864_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.3	9.4e-227
SQF00270.1|1867950_1868805_-	peptidoglycan endo-beta-N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
SQF00271.1|1869080_1869305_-	putative staphylococcal protein	NA	NA	NA	NA	NA
SQF00272.1|1870085_1870529_+	comK family protein	NA	NA	NA	NA	NA
SQF00273.1|1870515_1870959_-	putative staphylococcal protein	NA	A0A2H4PQT8	Staphylococcus_phage	98.6	2.4e-57
SQF00274.1|1871254_1871890_+|protease	CAAX amino terminal protease	protease	NA	NA	NA	NA
SQF00275.1|1872329_1873043_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
SQF00276.1|1873302_1873605_+	membrane protein	NA	NA	NA	NA	NA
SQF00277.1|1873860_1874226_+	CrcB family protein	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
SQF00278.1|1874222_1874576_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	100.0	2.6e-22
SQF00279.1|1874958_1875792_-	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	100.0	5.4e-159
SQF00280.1|1876003_1876912_-	Uncharacterised protein	NA	A0A2H4PQQ8	Staphylococcus_phage	100.0	3.4e-138
SQF00281.1|1877036_1878230_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
SQF00282.1|1878601_1880194_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
SQF00283.1|1880571_1881342_-	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.8	1.1e-142
SQF00284.1|1881322_1881802_-	phosphohydrolase	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
SQF00285.1|1881861_1882119_+	Putative cytosolic protein	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
SQF00286.1|1882115_1883117_-	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.9	2.2e-186
SQF00287.1|1883121_1884600_-	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.4	8.1e-283
SQF00288.1|1884758_1885241_-	putative lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	97.9	4.6e-78
SQF00289.1|1885552_1886167_+	endonuclease	NA	A0A2H4PQM8	Staphylococcus_phage	84.8	9.5e-36
SQF00290.1|1886247_1887243_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	98.8	6.2e-77
SQF00291.1|1887318_1887945_+	lipoprotein	NA	A0A2H4PQM7	Staphylococcus_phage	93.8	5.3e-90
SQF00292.1|1887985_1888327_+	Uncharacterised protein	NA	A0A2H4PQN6	Staphylococcus_phage	95.6	3.0e-55
SQF00293.1|1888427_1889000_+	Uncharacterised protein	NA	A0A2H4PQN4	Staphylococcus_phage	96.6	1.1e-25
SQF00294.1|1889196_1889754_-	Domain of uncharacterised function (DUF955)	NA	A0A2H4PQN8	Staphylococcus_phage	96.2	2.7e-77
SQF00295.1|1890126_1890303_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF00296.1|1890313_1890502_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF00297.1|1891411_1891666_-	exported protein	NA	NA	NA	NA	NA
SQF00298.1|1891734_1891854_-	putative protein with DUF1433	NA	NA	NA	NA	NA
SQF00299.1|1891853_1892297_-	exported protein	NA	NA	NA	NA	NA
SQF00300.1|1892296_1892740_-	putative protein with DUF1433	NA	NA	NA	NA	NA
SQF00301.1|1893164_1895702_+	hyaluronate lyase	NA	NA	NA	NA	NA
SQF00302.1|1895825_1896203_-	exported protein	NA	NA	NA	NA	NA
SQF00303.1|1896408_1896849_-	putative protein with DUF1433	NA	NA	NA	NA	NA
SQF00304.1|1896893_1898507_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQF00305.1|1898521_1898821_+	ESAT-6 family protein	NA	NA	NA	NA	NA
SQF00306.1|1898947_1900192_-	restriction-modification system, S subunit	NA	A0A2H4PQP5	Staphylococcus_phage	62.1	1.2e-125
SQF00307.1|1900184_1901741_-	Type I restriction enzyme EcoprrI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.0	2.6e-287
SQF00308.1|1902103_1902823_-|protease	Serine protease splD	protease	A0A2H4PQP1	Staphylococcus_phage	99.6	1.9e-131
SQF00309.1|1902973_1903690_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	99.2	2.4e-131
SQF00310.1|1903847_1904567_-|protease	Serine protease splD	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	5.1e-129
SQF00311.1|1904687_1905407_-|protease	Serine protease splC	protease	A0A2H4PQP7	Staphylococcus_phage	98.7	1.3e-129
SQF00312.1|1905464_1906187_-|protease	Serine protease splB	protease	A0A2H4PQN0	Staphylococcus_phage	100.0	6.4e-132
SQF00313.1|1906311_1907019_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	99.6	7.7e-130
SQF00314.1|1907982_1908552_+	beta-lactamase	NA	A0A2H4PQH6	Staphylococcus_phage	62.6	2.6e-51
SQF00315.1|1909025_1909298_-	truncated BsaG protein	NA	A0A2H4PQH0	Staphylococcus_phage	78.8	2.9e-29
SQF00316.1|1909499_1909973_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQF00317.1|1909977_1910769_+	Domain of uncharacterised function DUF1828	NA	NA	NA	NA	NA
SQF00318.1|1911138_1912122_-	Leukotoxin LukD	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
SQF00319.1|1912123_1913059_-	Leukocidin S subunit lukE	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
>prophage 9
LS483324	Staphylococcus aureus strain NCTC10344 genome assembly, chromosome: 1	2835275	1999197	2149405	2835275	transposase,integrase,holin,terminase,tRNA,capsid,portal,head,tail,protease	Staphylococcus_phage(82.52%)	168	2096898:2096917	2110824:2110843
SQF00394.1|1999197_2000625_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
SQF00395.1|2000637_2002095_-|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
SQF00396.1|2002096_2002399_-|tRNA	Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C	tRNA	NA	NA	NA	NA
SQF00397.1|2002765_2004304_+	Sodium/proline symporter	NA	NA	NA	NA	NA
SQF00398.1|2004392_2005592_-	Lipoprotein (pheromone precursor)	NA	NA	NA	NA	NA
SQF00399.1|2005604_2007608_-	DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
SQF00400.1|2007611_2009804_-	ATP-dependent DNA helicase UvrD/PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
SQF00401.1|2009800_2010493_-	geranylgeranylglyceryl diphosphate synthase	NA	NA	NA	NA	NA
SQF00402.1|2010665_2010968_-	His repressor	NA	NA	NA	NA	NA
SQF00403.1|2011076_2012372_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
SQF00404.1|2013231_2014398_+	Staphopain A precursor	NA	NA	NA	NA	NA
SQF00405.1|2014428_2014755_+|protease	putative cysteine protease inhibitor (Staphostatin A)	protease	NA	NA	NA	NA
SQF00406.1|2015046_2015220_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF00407.1|2015200_2015803_-	Uncharacterized protein conserved in bacteria (DUF2179)	NA	NA	NA	NA	NA
SQF00408.1|2016073_2016895_-	NH(3)-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.3	8.8e-69
SQF00409.1|2016887_2018357_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	3.5e-108
SQF00410.1|2018540_2019617_+	nitric-oxide synthase	NA	NA	NA	NA	NA
SQF00411.1|2019636_2020431_+	ACT domain protein	NA	NA	NA	NA	NA
SQF00412.1|2020620_2022183_-	sodium-dependent dicarboxylate transporter sdcS	NA	NA	NA	NA	NA
SQF00413.1|2022387_2023485_-	cell wall surface anchor family protein	NA	U5PWM6	Bacillus_phage	34.9	2.5e-47
SQF00414.1|2023856_2024417_+	Nicotinamidase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
SQF00415.1|2024469_2025399_+	inorganic pyrophosphatase	NA	NA	NA	NA	NA
SQF00416.1|2025818_2027198_+	Aldehyde dehydrogenase	NA	NA	NA	NA	NA
SQF00417.1|2027317_2028346_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
SQF00418.1|2028615_2029017_+	yolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
SQF00419.1|2029589_2029763_-	exported protein	NA	NA	NA	NA	NA
SQF00420.1|2030141_2031254_+	choloylglycine hydrolase	NA	NA	NA	NA	NA
SQF00421.1|2031310_2032153_-	exported protein	NA	NA	NA	NA	NA
SQF00422.1|2032149_2032707_-	Predicted membrane protein	NA	NA	NA	NA	NA
SQF00423.1|2032766_2033291_-	membrane protein	NA	NA	NA	NA	NA
SQF00424.1|2033411_2033975_+	Thioredoxin	NA	NA	NA	NA	NA
SQF00425.1|2034040_2034781_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
SQF00426.1|2034780_2035653_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
SQF00427.1|2035649_2036330_-	membrane protein	NA	NA	NA	NA	NA
SQF00428.1|2036330_2037227_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
SQF00429.1|2037223_2037604_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQF00430.1|2037862_2038039_-	membrane protein	NA	NA	NA	NA	NA
SQF00431.1|2038579_2039866_+	Aspartate aminotransferase	NA	NA	NA	NA	NA
SQF00432.1|2040144_2040435_-	truncated map-w protein; extracellular adherence protein of broad specificity Eap/Map	NA	NA	NA	NA	NA
SQF00433.1|2040445_2042509_-	MHC class II analog (pseudogene)	NA	NA	NA	NA	NA
SQF00434.1|2042894_2043095_+	beta-hemolysin	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
SQF00435.1|2044269_2044620_-	Involved in expression of fibrinogen binding protein, phage associated	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
SQF00436.1|2045129_2045426_-	amidase	NA	R9QTN8	Staphylococcus_phage	99.0	3.0e-51
SQF00437.1|2046116_2046608_-	Staphylokinase	NA	A7TWR8	Staphylococcus_phage	100.0	8.0e-86
SQF00438.1|2046798_2047554_-	Autolysin	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
SQF00439.1|2047565_2047820_-|holin	Phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
SQF00440.1|2048350_2048725_-	phage protein	NA	G4KNR3	Staphylococcus_phage	100.0	3.3e-39
SQF00441.1|2048780_2049068_-	phi PVL ORF 22-like protein	NA	C5I682	Staphylococcus_phage	100.0	9.9e-44
SQF00442.1|2049113_2049266_-	phage protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
SQF00443.1|2049258_2053041_-	phage minor structural, N-terminal region domain protein	NA	A0A1V0E5H3	Staphylococcus_phage	100.0	0.0e+00
SQF00444.1|2053056_2054547_-|tail	phage tail family protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
SQF00445.1|2054546_2059196_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A1V0E5H1	Staphylococcus_phage	100.0	0.0e+00
SQF00446.1|2059433_2059880_-	Bacteriophage	NA	D2JLF5	Staphylococcus_phage	100.0	5.4e-73
SQF00447.1|2059944_2060898_-|tail	phage major tail, phi13 family protein	tail	A7TWD0	Staphylococcus_phage	100.0	6.2e-175
SQF00448.1|2060898_2061279_-	phi PVL orf 12-like protein	NA	D2JLF3	Staphylococcus_phage	100.0	5.8e-68
SQF00449.1|2061275_2061653_-	gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	100.0	1.1e-61
SQF00450.1|2061652_2061988_-|head,tail	phage head-tail adaptor	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
SQF00451.1|2061974_2062307_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
SQF00452.1|2062315_2062474_-	Bacteriophage	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
SQF00453.1|2062509_2063757_-|capsid	phage major capsid protein, HK97 family	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
SQF00454.1|2063844_2064429_-|head,protease	prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
SQF00455.1|2064421_2065672_-|portal	portal protein	portal	R9QSV8	Staphylococcus_phage	100.0	1.7e-236
SQF00456.1|2065677_2065917_-	phi PVL orf 3-like protein	NA	R9QT78	Staphylococcus_phage	100.0	5.3e-35
SQF00457.1|2065891_2067586_-	phage Terminase family protein	NA	A0A1V0E5G5	Staphylococcus_phage	100.0	0.0e+00
SQF00458.1|2067588_2068056_-|terminase	phage terminase small subunit	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
SQF00459.1|2068185_2068539_-	phage endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	1.3e-66
SQF00460.1|2068545_2068998_-	hypothetical phage-related protein	NA	R9QTP3	Staphylococcus_phage	100.0	1.8e-79
SQF00461.1|2069112_2069574_-	Phage protein	NA	R9QT84	Staphylococcus_phage	100.0	8.7e-74
SQF00462.1|2069596_2069800_-	phage protein	NA	R9QT57	Staphylococcus_phage	100.0	6.3e-29
SQF00463.1|2069796_2070447_-	Uncharacterised protein	NA	D2JLD8	Staphylococcus_phage	100.0	8.9e-117
SQF00464.1|2070453_2070606_-	Uncharacterised protein	NA	A0A2I6PDV2	Staphylococcus_phage	100.0	5.4e-17
SQF00465.1|2070605_2070755_-	transcriptional activator RinB	NA	R9QSU6	Staphylococcus_phage	100.0	1.8e-17
SQF00466.1|2070751_2070958_-	phage protein	NA	S4V684	Staphylococcus_phage	100.0	7.6e-30
SQF00467.1|2070994_2071531_-	dUTPase family protein	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
SQF00468.1|2071523_2071772_-	Phage protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
SQF00469.1|2071764_2072049_-	phage protein	NA	E9LT36	Staphylococcus_phage	100.0	2.7e-46
SQF00470.1|2072045_2072495_-	YopX-family protein	NA	A0A2I6PDH2	Staphylococcus_phage	100.0	9.3e-81
SQF00471.1|2072491_2072686_-	phage protein	NA	A0A2I6PE33	Staphylococcus_phage	100.0	2.5e-27
SQF00472.1|2072682_2073069_-	phage protein	NA	I1W655	Staphylococcus_phage	100.0	4.1e-69
SQF00473.1|2073082_2073325_-	phage family protein	NA	R9QT89	Staphylococcus_phage	100.0	3.0e-41
SQF00474.1|2073328_2073697_-	Phage protein	NA	A0A0E3XD52	Staphylococcus_phage	100.0	6.7e-53
SQF00475.1|2073709_2074114_-	phage protein	NA	A0A0E3XBN4	Staphylococcus_phage	100.0	1.4e-72
SQF00476.1|2074122_2074341_-	phage protein	NA	A0A1P8L6E4	Staphylococcus_phage	100.0	1.4e-37
SQF00477.1|2074347_2075241_-	Phage protein	NA	A0A0E3TAG7	Staphylococcus_phage	100.0	1.1e-141
SQF00478.1|2075270_2075741_-	Single-stranded DNA-binding protein, phage associated	NA	A0A0E3T9H6	Staphylococcus_phage	100.0	5.7e-81
SQF00479.1|2075741_2076227_-	Metallo-beta-lactamase superfamily domain protein in prophage	NA	S4SWA4	Staphylococcus_phage	100.0	9.4e-87
SQF00480.1|2076439_2077360_-	recombinase, phage RecT family protein	NA	A0A1V0E5D7	Staphylococcus_phage	100.0	1.0e-166
SQF00481.1|2077361_2079311_-	Uncharacterized conserved protein	NA	R9QT82	Staphylococcus_phage	100.0	0.0e+00
SQF00482.1|2079313_2079577_-	phage protein	NA	A0A2I6PDG2	Staphylococcus_phage	100.0	7.7e-43
SQF00483.1|2079585_2079846_-	putative phi PVL-like protein	NA	A0A2I6PDH1	Staphylococcus_phage	100.0	2.6e-43
SQF00484.1|2079938_2080100_-	phage protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
SQF00485.1|2080096_2080417_-	Uncharacterized protein conserved in bacteria	NA	A0A1V0E5D0	Staphylococcus_phage	100.0	1.1e-56
SQF00486.1|2080475_2080703_+	Uncharacterised protein	NA	A7TWL9	Staphylococcus_phage	100.0	1.7e-38
SQF00487.1|2080704_2080896_-	Uncharacterised protein	NA	A7TWL8	Staphylococcus_phage	100.0	2.8e-26
SQF00488.1|2080945_2081302_+	Phage protein	NA	A0A1P8L6H1	Staphylococcus_phage	100.0	6.1e-59
SQF00489.1|2081296_2081491_-	phage protein	NA	A0A1P8L6G6	Staphylococcus_phage	100.0	4.3e-19
SQF00490.1|2081506_2082295_-	prophage L54a, antirepressor	NA	R9QSV3	Staphylococcus_phage	100.0	1.2e-144
SQF00491.1|2082310_2082553_-	phage DNA-binding protein	NA	R9QSU1	Staphylococcus_phage	100.0	9.5e-40
SQF00492.1|2082716_2083433_+	repressor-like protein	NA	R9QTP6	Staphylococcus_phage	100.0	9.2e-131
SQF00493.1|2083444_2084302_+	HIRAN domain-containing protein	NA	R9QTP0	Staphylococcus_phage	100.0	1.2e-161
SQF00494.1|2084346_2084529_+	Putative cytosolic protein	NA	R9QT81	Staphylococcus_phage	100.0	5.3e-27
SQF00495.1|2084585_2084711_+	ORF136	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
SQF00496.1|2084707_2085322_-	phi PVL ORF 30-like protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
SQF00497.1|2085429_2086467_+	DNA integration/recombination/inversion protein	NA	A7TWL3	Staphylococcus_phage	100.0	3.4e-179
SQF00498.1|2086523_2087348_+	phospholipase C	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
SQF00499.1|2087585_2088602_-	gamma-hemolysin component B	NA	A0A2I6PER8	Staphylococcus_phage	29.3	2.3e-26
SQF00500.1|2088623_2089676_-	Leukocidin S subunit	NA	A0A1X9IGW5	Staphylococcus_phage	34.6	2.5e-36
SQF00501.1|2090110_2091334_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
SQF00502.1|2091705_2092551_-	tetracenomycin polyketide synthesis O-methyltransferase TcmP	NA	NA	NA	NA	NA
SQF00503.1|2092612_2093524_-	ferric hydroxamate receptor 1	NA	NA	NA	NA	NA
SQF00504.1|2093684_2094992_+	Na+-transporting ATP synthase	NA	NA	NA	NA	NA
SQF00505.1|2095563_2096190_-	Phage protein	NA	C8CH40	Staphylococcus_phage	44.5	7.0e-42
SQF00506.1|2096186_2096366_-	mobile element-associated protein	NA	NA	NA	NA	NA
2096898:2096917	attL	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
SQF00507.1|2097374_2098067_-|protease	subtilase family protease, putative	protease	NA	NA	NA	NA
SQF00508.1|2098053_2098659_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQF00509.1|2098672_2099422_-	exported protein	NA	NA	NA	NA	NA
SQF00510.1|2100568_2100931_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQF00511.1|2101015_2101585_-|terminase	putative phage terminase	terminase	Q4ZE85	Staphylococcus_phage	97.4	6.6e-100
SQF00512.1|2101581_2101923_-|transposase	transposase	transposase	Q4ZE86	Staphylococcus_phage	91.2	8.7e-55
SQF00513.1|2101925_2102453_-	pathogenicity island protein	NA	Q4ZE87	Staphylococcus_phage	97.1	3.7e-89
SQF00514.1|2102503_2102722_-	hypothetical mobile element-associated protein	NA	NA	NA	NA	NA
SQF00515.1|2102739_2103318_-|transposase	transposase	transposase	A0A2H4JBG0	uncultured_Caudovirales_phage	39.5	1.6e-29
SQF00516.1|2103329_2103671_-	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	96.5	2.1e-56
SQF00517.1|2104017_2104659_-|transposase	transposase	transposase	Q4ZE67	Staphylococcus_phage	92.5	8.0e-110
SQF00518.1|2104660_2104933_-	pathogenicity island protein	NA	Q4ZE68	Staphylococcus_phage	100.0	3.2e-44
SQF00519.1|2104919_2105723_-	pathogenicity island replication protein	NA	Q4ZE69	Staphylococcus_phage	97.0	6.2e-152
SQF00520.1|2105898_2107515_-	bacteriophage resistance protein	NA	A0A1W6JPF4	Staphylococcus_phage	77.0	1.8e-243
SQF00521.1|2107589_2107889_-	mobile element-associated DUF1474-containing protein, putative	NA	A0A1W6JQH0	Staphylococcus_phage	58.2	6.1e-20
SQF00522.1|2107891_2108101_-	pathogenicity island protein	NA	Q4ZE76	Staphylococcus_phage	94.2	1.7e-29
SQF00523.1|2108093_2108240_-	hypothetical bovine pathogenicity island protein	NA	NA	NA	NA	NA
SQF00524.1|2108236_2108554_-	mobile element-associated transcriptional regulator, putative	NA	A0A1W6JQE0	Staphylococcus_phage	94.3	8.6e-49
SQF00525.1|2108557_2108770_-	pathogenicity island protein	NA	A0A1W6JQE8	Staphylococcus_phage	84.1	3.8e-24
SQF00526.1|2108943_2109576_+	mobile element-associated transcriptional regulator, putative	NA	A0A1W6JQE6	Staphylococcus_phage	82.9	2.2e-96
SQF00527.1|2109584_2110757_+|integrase	mobile element-associated integrase, putative	integrase	A0A1W6JQD3	Staphylococcus_phage	98.2	5.9e-220
SQF00528.1|2110825_2112442_-	heat shock protein 60 family chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
2110824:2110843	attR	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
SQF00529.1|2112517_2112802_-	Heat shock protein 60 family co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
SQF00530.1|2112976_2113720_+	abortive infection protein	NA	NA	NA	NA	NA
SQF00531.1|2113744_2115004_-	membrane anchored protein	NA	NA	NA	NA	NA
SQF00532.1|2115200_2115827_+	nitroreductase family protein	NA	NA	NA	NA	NA
SQF00533.1|2116187_2116973_+	Aliphatic amidase amiE	NA	NA	NA	NA	NA
SQF00534.1|2117884_2118508_+	accessory gene regulator protein B AGRB	NA	NA	NA	NA	NA
SQF00535.1|2118504_2118645_+	Regulator protein agrD	NA	NA	NA	NA	NA
SQF00536.1|2118669_2119962_+	Regulator protein agrC	NA	NA	NA	NA	NA
SQF00537.1|2119980_2120697_+	accessory gene regulator protein A	NA	A0A2H4J4Z6	uncultured_Caudovirales_phage	32.2	6.8e-25
SQF00538.1|2121065_2122025_-	Fructokinase	NA	NA	NA	NA	NA
SQF00539.1|2122021_2123506_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	4.0e-19
SQF00540.1|2123654_2124605_-	Sucrose operon repressor ScrR, LacI family	NA	NA	NA	NA	NA
SQF00541.1|2124787_2126038_-	ammonium transporter family protein	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	5.8e-40
SQF00542.1|2126244_2126469_-	transcriptional regulator	NA	NA	NA	NA	NA
SQF00543.1|2126528_2127608_-	putative transport system permease protein	NA	NA	NA	NA	NA
SQF00544.1|2127911_2128547_-	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	NA	NA	NA	NA	NA
SQF00545.1|2128799_2130728_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.4	2.4e-53
SQF00546.1|2131680_2133291_+	MutS-related protein, family 1	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	3.3e-19
SQF00547.1|2133392_2134418_-|protease	glycoprotease	protease	A0A0R6PI74	Moraxella_phage	40.6	5.8e-62
SQF00548.1|2134410_2134875_-	Ribosomal-protein-S18p-alanine acetyltransferase	NA	NA	NA	NA	NA
SQF00549.1|2134847_2135510_-|protease	Inactive protein of metal-dependent protease family, putative molecular chaperone	protease	NA	NA	NA	NA
SQF00550.1|2135490_2135985_-	ATP/GTP hydrolase	NA	NA	NA	NA	NA
SQF00551.1|2136462_2138151_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
SQF00552.1|2138178_2139948_+	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	30.1	5.3e-63
SQF00553.1|2139947_2140202_+	Acetolactate synthase small subunit	NA	NA	NA	NA	NA
SQF00554.1|2140338_2141343_+	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
SQF00555.1|2141372_2142902_+	2-isopropylmalate synthase	NA	E5EQ69	Micromonas_sp._RCC1109_virus	28.1	5.5e-08
SQF00556.1|2142904_2143951_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
SQF00557.1|2143964_2145335_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
SQF00558.1|2145335_2145908_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
SQF00559.1|2145922_2147191_+	Threonine dehydratase	NA	NA	NA	NA	NA
SQF00560.1|2147267_2147684_-	exported protein	NA	NA	NA	NA	NA
SQF00561.1|2148085_2149405_+|transposase	IS1181 transposase	transposase	NA	NA	NA	NA
