The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	429270	491727	2951503	transposase,integrase,terminase	Staphylococcus_phage(43.59%)	74	431617:431632	482496:482511
SQE59711.1|429270_429462_-	Uncharacterised protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
SQE59713.1|429705_430002_+	30S ribosomalprotein S6p	NA	NA	NA	NA	NA
SQE59716.1|430022_430526_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.1	3.5e-60
SQE59717.1|430577_430820_+	30S ribosomalprotein S18p	NA	NA	NA	NA	NA
SQE59720.1|431058_431958_-	Abortive infection bacteriophage resistance protein	NA	NA	NA	NA	NA
431617:431632	attL	AAAATCTTTCATAATT	NA	NA	NA	NA
SQE59722.1|431959_433174_-	Integrase	NA	Q4ZE80	Staphylococcus_phage	97.3	1.7e-222
SQE59727.1|433122_433341_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE59729.1|433452_434148_-	Xre family transcriptional regulator	NA	NA	NA	NA	NA
SQE59732.1|434292_434505_+	Ps3 protein 14 family transcriptional regulator	NA	NA	NA	NA	NA
SQE59741.1|434537_434810_+	pathogenicity island protein	NA	Q4ZE77	Staphylococcus_phage	88.4	3.8e-37
SQE59743.1|434821_434968_+	hypothetical bovine pathogenicity island protein	NA	NA	NA	NA	NA
SQE59745.1|434960_435170_+	pathogenicity island protein	NA	Q4ZE76	Staphylococcus_phage	100.0	1.1e-31
SQE59747.1|435172_435502_+	mobile element-associated protein	NA	Q4ZE75	Staphylococcus_phage	89.9	7.6e-48
SQE59749.1|435565_436435_+	pathogenicity island protein	NA	A0A1W6JQL5	Staphylococcus_phage	93.1	2.0e-156
SQE59751.1|436451_437921_+	pathogenicity island protein	NA	A0A1W6JQD6	Staphylococcus_phage	96.7	1.7e-280
SQE59754.1|438199_438562_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
SQE59756.1|438563_438848_+	pathogenicity island protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
SQE59758.1|438844_439486_+|transposase	transposase	transposase	Q4ZE67	Staphylococcus_phage	92.5	1.5e-108
SQE59761.1|440022_440364_+	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	99.1	1.9e-57
SQE59763.1|440394_441048_+	Uncharacterised protein	NA	Q4ZE82	Staphylococcus_phage	99.1	1.3e-115
SQE59765.1|441100_441628_+	pathogenicity island protein	NA	Q4ZE87	Staphylococcus_phage	95.4	7.8e-87
SQE59767.1|441630_441972_+|transposase	transposase	transposase	Q4ZE86	Staphylococcus_phage	98.2	8.4e-58
SQE59769.1|441968_442538_+|terminase	putative phage terminase	terminase	Q4ZE85	Staphylococcus_phage	97.9	1.0e-100
SQE59770.1|442966_443485_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQE59772.1|443481_443910_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQE59775.1|443896_444676_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQE59777.1|444855_445140_+	pathogenicity island protein	NA	A0A2H4JAH5	uncultured_Caudovirales_phage	63.0	2.4e-26
SQE59779.1|446192_447167_-	Abortive infection bacteriophage resistance protein	NA	NA	NA	NA	NA
SQE59781.1|447169_447460_-|integrase	integrase-like protein	integrase	Q4ZE80	Staphylococcus_phage	70.5	5.2e-24
SQE59784.1|448076_448688_+	staphylococcal enterotoxin, putative	NA	NA	NA	NA	NA
SQE59787.1|449056_449425_+	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQE59789.1|449605_450178_+	lipoprotein	NA	NA	NA	NA	NA
SQE59791.1|450315_450579_-	XRE family transcription regulator, putative	NA	NA	NA	NA	NA
SQE59794.1|450878_451130_+	transglycosylase associated family protein	NA	NA	NA	NA	NA
SQE59796.1|451555_452137_+	truncated phosphoglycerate mutase family protein	NA	NA	NA	NA	NA
SQE59798.1|452202_452589_-	membrane spanning protein	NA	NA	NA	NA	NA
SQE59800.1|452840_453467_-	lipoprotein	NA	NA	NA	NA	NA
SQE59803.1|453539_453797_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE59805.1|453911_455435_-	Alkyl hydroperoxide reductase protein F	NA	A0A249XZT7	Enterococcus_phage	33.6	1.9e-40
SQE59808.1|455450_456020_-	Alkyl hydroperoxide reductase protein C	NA	NA	NA	NA	NA
SQE59810.1|456460_457267_+	Chromate reductase	NA	NA	NA	NA	NA
SQE59813.1|457347_458736_-	Sodium:dicarboxylate symporter family protein	NA	NA	NA	NA	NA
SQE59815.1|459712_460669_-	DNA-binding protein	NA	NA	NA	NA	NA
SQE59818.1|460786_461449_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE59820.1|461591_461999_-	transcriptional regulator	NA	NA	NA	NA	NA
SQE59823.1|462511_463090_+	Xanthine phosphoribosyltransferase	NA	NA	NA	NA	NA
SQE59826.1|463089_464358_+	Xanthine permease	NA	NA	NA	NA	NA
SQE59828.1|464395_465862_+	Inosine-5-monophosphate dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.5	5.2e-96
SQE59830.1|465886_467428_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	32.6	1.2e-23
SQE59833.1|467495_468689_-|integrase	integrase-like protein	integrase	A0A0S2MV79	Bacillus_phage	34.2	8.3e-44
SQE59835.1|468715_468916_-	Domain of uncharacterised function (DUF3173)	NA	NA	NA	NA	NA
SQE59837.1|469413_469644_-	Polyribonucleotide nucleotidyltransferase	NA	A0A1S5SEX1	Streptococcus_phage	78.9	1.0e-27
SQE59839.1|469640_470063_-	Sigma-70 Region 4 protein	NA	A0A1S5SEW0	Streptococcus_phage	68.6	7.5e-48
SQE59841.1|470593_470947_+	putative HTH-type transcriptional regulator	NA	A0A1S5SFA6	Streptococcus_phage	89.7	2.2e-53
SQE59844.1|471290_473210_-	tetracycline resistance protein TetM	NA	A0A1S5SF82	Streptococcus_phage	97.2	0.0e+00
SQE59846.1|473586_474516_-	conjugative transposon-like protein	NA	A0A1S5SF22	Streptococcus_phage	56.6	1.1e-83
SQE59849.1|474532_475555_-	NLP/P60 family lipoprotein	NA	A0A1S5SEZ8	Streptococcus_phage	75.5	2.4e-132
SQE59851.1|475551_477579_-	Conjugative transposon membrane protein	NA	A0A1S5SF30	Streptococcus_phage	65.5	2.3e-195
SQE59853.1|477575_480029_-	ATP/GTP-binding protein	NA	A0A1S5SF64	Streptococcus_phage	78.8	0.0e+00
SQE59856.1|480012_480408_-	conjugative transposon-like protein	NA	A0A1S5SEX7	Streptococcus_phage	72.6	5.9e-47
SQE59857.1|480479_481109_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE59860.1|481137_481866_-	ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	39.0	7.8e-37
SQE59863.1|481865_483293_-|transposase	putative transposase	transposase	NA	NA	NA	NA
482496:482511	attR	AAAATCTTTCATAATT	NA	NA	NA	NA
SQE59864.1|483376_483505_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE59866.1|483560_484061_-	putative antirestriction protein	NA	A0A1S5SF25	Streptococcus_phage	63.0	1.7e-54
SQE59868.1|484121_484883_-	Protein of uncharacterised function (DUF3644)	NA	NA	NA	NA	NA
SQE59870.1|484942_485164_-	Conjugative transposon protein	NA	A0A1S5SEY0	Streptococcus_phage	93.2	3.1e-29
SQE59872.1|485160_485451_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE59873.1|485447_486632_-	replication initiation factor	NA	A0A1S5SEX3	Streptococcus_phage	68.1	6.3e-161
SQE59875.1|486813_488217_-	Ftsk domain-containing protein	NA	A0A1S5SFB5	Streptococcus_phage	66.7	7.5e-177
SQE59876.1|488238_489012_-	putative mom-like protein	NA	NA	NA	NA	NA
SQE59878.1|489021_489399_-	Conjugative transposon protein	NA	A0A1S5SF96	Streptococcus_phage	76.4	9.6e-47
SQE59880.1|489419_489734_-	putative conjugative transposon protein	NA	A0A1S5SF38	Streptococcus_phage	77.7	1.2e-42
SQE59882.1|489933_491727_-	putative UvrD/REP helicase	NA	E3T5J8	Cafeteria_roenbergensis_virus	23.8	6.9e-26
>prophage 2
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	600120	607555	2951503	tRNA	Klosneuvirus(16.67%)	7	NA	NA
SQE60049.1|600120_601416_+|tRNA	tRNA(Ile)-lysidine synthetase	tRNA	A0A1V0SI91	Klosneuvirus	24.5	4.8e-13
SQE60052.1|601420_601960_+	hypoxanthine-guanine phosphoribosyltransferase	NA	A0A218MMB5	uncultured_virus	29.8	6.5e-12
SQE60054.1|602216_602921_+	Cell division protein FtsH	NA	R4TQL5	Phaeocystis_globosa_virus	52.9	6.5e-12
SQE60057.1|602923_604309_+	Cell division protein FtsH	NA	E5EQ50	Micromonas_sp._RCC1109_virus	47.4	1.1e-82
SQE60060.1|604537_605419_+	Chaperonin (heat shock protein 33)	NA	NA	NA	NA	NA
SQE60063.1|605597_606530_+	beta-cyano-L-alanine synthase	NA	A0A1X9I5K7	Streptococcus_phage	65.7	3.7e-108
SQE60065.1|606745_607555_+	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	29.0	8.8e-21
>prophage 3
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	826456	834276	2951503		Hokovirus(16.67%)	10	NA	NA
SQE60572.1|826456_827512_-	Sensor histidine protein kinase SaeS (exoprotein expression protein S)	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
SQE60575.1|827511_828198_-	Response regulator SaeR	NA	NA	NA	NA	NA
SQE60577.1|828172_828646_-	DoxX family protein	NA	NA	NA	NA	NA
SQE60580.1|828987_829428_-	lipoprotein	NA	NA	NA	NA	NA
SQE60583.1|829707_830292_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE60585.1|830390_831104_-	Queuosine Biosynthesis QueE Radical SAM	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
SQE60587.1|831107_831527_-	6-pyruvoyl-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
SQE60589.1|831528_832197_-	Queuosine Biosynthesis QueC ATPase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
SQE60592.1|832547_833141_+	Para-aminobenzoate synthase, amidotransferase component PabAb	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
SQE60594.1|833124_834276_+	Para-aminobenzoate synthetase component I	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 4
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	846248	861035	2951503		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
SQE60613.1|846248_847307_+	histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
SQE60615.1|847657_848200_+	5'-3'-deoxyribonucleotidase, putative	NA	NA	NA	NA	NA
SQE60618.1|848879_849797_-	Transcription regulator (contains diacylglycerol kinase catalytic domain)	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
SQE60620.1|850066_851572_-	Di/tripeptide permease YjdL	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
SQE60680.1|851912_852413_-	NADPH dependent preQ0 reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
SQE60682.1|852432_853299_-	Integral membrane domain protein	NA	NA	NA	NA	NA
SQE60685.1|854099_854498_+	Nrdi	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
SQE60687.1|854460_856566_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
SQE60689.1|856683_857655_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
SQE60691.1|858320_859334_+	FatD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
SQE60693.1|859320_860277_+	Iron compound ABC uptake transporter permease protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
SQE60695.1|860273_861035_+	Iron compound ABC uptake transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 5
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	1111110	1119583	2951503		Synechococcus_phage(33.33%)	9	NA	NA
SQE60998.1|1111110_1111593_+	AIR carboxylase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
SQE60999.1|1111579_1112704_+	Phosphoribosylaminoimidazole carboxylase ATPase subunit	NA	NA	NA	NA	NA
SQE61000.1|1112707_1113412_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
SQE61001.1|1113411_1113675_+	Phosphoribosylformylglycinamidine synthase, PurS subunit	NA	NA	NA	NA	NA
SQE61002.1|1113676_1114348_+	Phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
SQE61003.1|1114340_1116530_+	Phosphoribosylformylglycinamidine synthase, synthetase subunit	NA	A6N228	Microbacterium_phage	39.5	1.1e-139
SQE61004.1|1116508_1117993_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.5	5.5e-45
SQE61005.1|1117985_1119014_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
SQE61006.1|1119016_1119583_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 6
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	1661319	1669631	2951503	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
SQE61497.1|1661319_1662105_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
SQE61498.1|1662230_1663121_-	endonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
SQE61499.1|1663130_1664477_-	ATP-dependent RNA helicase YqfR	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
SQE61500.1|1664590_1665691_-	NIF3 protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
SQE61501.1|1665693_1666371_-|tRNA	Putative tRNA-m1A22 methylase	tRNA	NA	NA	NA	NA
SQE61502.1|1666501_1667608_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
SQE61503.1|1667831_1669631_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 7
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	1738767	1747810	2951503	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
SQE61576.1|1738767_1739286_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
SQE61577.1|1739307_1741581_-	Single-stranded-DNA-specific exonuclease recJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
SQE61578.1|1741783_1744063_-	Protein-export membrane protein secD / Protein-export membrane protein secF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
SQE61579.1|1744337_1744598_-	Preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
SQE61580.1|1744616_1745756_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
SQE61581.1|1745778_1746804_-|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
SQE61582.1|1746805_1747810_-	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 8
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	1879996	2007995	2951503	holin,tRNA,capsid,transposase,integrase,head,tail,protease,portal,terminase	Staphylococcus_phage(86.03%)	147	1964123:1964141	2008054:2008072
SQE61693.1|1879996_1886557_-	LPXTG-motif cell wall anchor domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
SQE61694.1|1886882_1887194_-	Rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
SQE61695.1|1887215_1889633_-|tRNA	Leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
SQE61696.1|1889920_1891102_-	Multidrug resistance protein	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	5.6e-218
SQE61697.1|1891211_1892165_+	Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
SQE61698.1|1892161_1892725_+	SAM-dependent methyltransferase, MraW methylase family	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
SQE61699.1|1892844_1893246_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
SQE61700.1|1893765_1893990_-	Mobile element protein	NA	Q9MBP7	Staphylococcus_prophage	81.8	4.5e-20
SQE61701.1|1893986_1894478_-	Transposase	NA	A0A146ICT8	Staphylococcus_phage	91.6	2.4e-74
SQE61702.1|1894824_1895652_-	Lysophospholipase; Monoglyceride lipase; putative	NA	NA	NA	NA	NA
SQE61703.1|1895885_1896887_+	Proline dehydrogenase (Proline oxidase)	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
SQE61704.1|1897008_1897473_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
SQE61705.1|1897485_1898667_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.2	1.6e-225
SQE61706.1|1898677_1899310_-	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
SQE61707.1|1899316_1900360_-	5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
SQE61708.1|1900840_1902343_-	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
SQE61709.1|1902865_1903180_+	arsenical resistance operon repressor 2	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
SQE61710.1|1903179_1904472_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
SQE61711.1|1904489_1904885_+	arsenate reductase, putative	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
SQE61712.1|1905179_1906034_-	peptidoglycan endo-beta-N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
SQE61713.1|1906309_1906534_-	putative staphylococcal protein	NA	NA	NA	NA	NA
SQE61714.1|1906732_1907203_+	RNA polymerase sigma factor sigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
SQE61715.1|1907315_1907759_+	comK family protein	NA	NA	NA	NA	NA
SQE61716.1|1907745_1908189_-	putative staphylococcal protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
SQE61717.1|1908484_1909120_+|protease	CAAX amino terminal protease	protease	NA	NA	NA	NA
SQE61718.1|1909562_1910276_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
SQE61719.1|1910535_1910838_+	membrane protein	NA	NA	NA	NA	NA
SQE61720.1|1911093_1911459_+	CrcB family protein	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
SQE61721.1|1911455_1911809_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
SQE61722.1|1912363_1913188_+|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	98.2	1.7e-125
SQE61723.1|1913220_1913829_+|transposase	putative transposase	transposase	A0ZS58	Staphylococcus_virus	96.0	1.3e-109
SQE61724.1|1913891_1914725_-	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
SQE61725.1|1914936_1915845_-	Uncharacterised protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
SQE61726.1|1915969_1917163_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.7	1.9e-218
SQE61727.1|1917533_1919126_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
SQE61728.1|1919261_1919747_-|transposase	IS605/IS200-like transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
SQE61729.1|1920121_1920892_-	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.3e-142
SQE61730.1|1920872_1921352_-	phosphohydrolase	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
SQE61731.1|1921411_1921669_+	Putative cytosolic protein	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
SQE61732.1|1921665_1922667_-	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
SQE61733.1|1922671_1923754_-	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.5	3.8e-205
SQE61734.1|1924307_1924529_-	putative lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	4.5e-36
SQE61735.1|1925102_1925717_+	endonuclease	NA	A0A2H4PQM8	Staphylococcus_phage	87.3	9.5e-36
SQE61736.1|1926099_1926792_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	96.1	6.1e-63
SQE61737.1|1926867_1927506_+	lipoprotein	NA	A0A2H4PQM7	Staphylococcus_phage	91.2	4.9e-67
SQE61738.1|1927533_1927878_+	Uncharacterised protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
SQE61739.1|1927975_1928398_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE61740.1|1928744_1929386_-	Domain of uncharacterised function (DUF955)	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
SQE61741.1|1929499_1929685_-	[Genomic island nu Sa beta2]	NA	NA	NA	NA	NA
SQE61742.1|1929686_1929863_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE61743.1|1929873_1930257_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE61744.1|1930860_1931004_-|transposase	transposase family protein, putative	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
SQE61745.1|1931873_1932251_-	exported protein	NA	NA	NA	NA	NA
SQE61746.1|1932771_1936884_-	[Genomic island nu Sa beta2]	NA	A0A2H4PQT3	Staphylococcus_phage	100.0	0.0e+00
SQE61747.1|1937733_1938933_-	type I restriction-modification enzyme, S subunit, EcoA family protein	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
SQE61748.1|1938925_1940482_-	Type I restriction enzyme EcoprrI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
SQE61749.1|1940844_1941564_-|protease	Serine protease splD	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
SQE61750.1|1941714_1942431_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
SQE61751.1|1942588_1943308_-|protease	Serine protease splD	protease	A0A2H4PQP9	Staphylococcus_phage	99.2	1.3e-129
SQE61752.1|1943428_1944148_-|protease	Serine protease splC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
SQE61753.1|1944205_1944928_-|protease	Serine protease splB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
SQE61754.1|1945052_1945760_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
SQE61755.1|1945979_1947152_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE61756.1|1948058_1948625_+	probable beta-lactamase	NA	A0A2H4PQH6	Staphylococcus_phage	100.0	3.3e-99
SQE61757.1|1949098_1949797_-	lantibiotic ABC transporter protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
SQE61758.1|1949793_1950555_-	lantibiotic protection ABC transporter permease subunit, MutE/EpiE family protein	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
SQE61759.1|1950551_1951244_-	lantibiotic immunity protein F	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
SQE61760.1|1951266_1952640_-|protease	epidermin leader peptide processing serine protease EpiP	protease	A0A2H4PQH1	Staphylococcus_phage	99.8	1.9e-257
SQE61761.1|1952649_1953168_-	lantibiotic modifying enzyme	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
SQE61762.1|1953183_1954428_-	lanthionine synthetase C-like family protein	NA	A0A2H4PQH9	Staphylococcus_phage	100.0	5.1e-238
SQE61763.1|1954420_1956163_-	Epidermin biosynthesis protein epiB	NA	A0A2H4PQG8	Staphylococcus_phage	54.0	4.3e-259
SQE61764.1|1956227_1956371_-	lantibiotic gallidermin	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
SQE61765.1|1957491_1958475_-	Leukotoxin LukD	NA	A0A2H4PQH7	Staphylococcus_phage	99.1	2.3e-185
SQE61766.1|1958476_1959412_-	Leukocidin S subunit lukE	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
SQE61767.1|1960295_1960751_+	[Genomic island nu Sa beta2]	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
SQE61768.1|1960763_1961501_+	Domain of uncharacterised function DUF1828	NA	A0A2H4PQI0	Staphylococcus_phage	95.0	2.5e-115
SQE61769.1|1961471_1962644_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
1964123:1964141	attL	TTTACGGAAGGTAAGGGAT	NA	NA	NA	NA
SQE61770.1|1964906_1965620_-	N-acetylmuramoyl-L-alanine amidase family protein	NA	Q4ZDC1	Staphylococcus_virus	99.6	8.0e-143
SQE61771.1|1966069_1966615_-	HNH homing endonuclease	NA	Q4ZA78	Staphylococcus_virus	100.0	4.9e-100
SQE61772.1|1966644_1967286_-	Phage amidase	NA	Q4ZDC4	Staphylococcus_virus	95.3	2.9e-120
SQE61773.1|1967266_1967704_-|holin	holin, phage phi LC3 family	holin	A0A2H4PQP0	Staphylococcus_phage	100.0	4.1e-73
SQE61774.1|1967759_1968155_-	phi ETA orf 63-like protein	NA	Q4ZBP5	Staphylococcus_phage	100.0	2.7e-68
SQE61775.1|1968160_1969333_-|tail	phage tail fiber protein	tail	A0A0N9BAZ1	Staphylococcus_phage	100.0	1.1e-197
SQE61776.1|1969345_1971220_-	mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	NA	Q4ZBP7	Staphylococcus_phage	100.0	0.0e+00
SQE61777.1|1971356_1971656_-	phage protein	NA	Q4ZBP8	Staphylococcus_phage	100.0	1.3e-46
SQE61778.1|1971696_1971873_-	phage protein	NA	Q8LTH6	Staphylococcus_phage	100.0	6.1e-28
SQE61779.1|1971873_1972251_-	SLT orf 129-like protein	NA	A9CRC6	Staphylococcus_phage	100.0	5.6e-55
SQE61780.1|1972250_1974074_-	phiETA ORF57-like protein	NA	B2ZYZ8	Staphylococcus_phage	99.5	0.0e+00
SQE61781.1|1974073_1975972_-	phage protein	NA	Q4ZBQ2	Staphylococcus_phage	100.0	0.0e+00
SQE61782.1|1975984_1977868_-	GDSL-like Lipase/Acylhydrolase family protein	NA	A0A0H4ITY6	Staphylococcus_phage	98.9	0.0e+00
SQE61783.1|1977878_1978814_-|tail	phage tail protein	tail	R4IH41	Staphylococcus_phage	100.0	8.2e-180
SQE61784.1|1978828_1981798_-|tail	putative phage tail protein	tail	Q4ZAG7	Staphylococcus_virus	99.1	1.9e-262
SQE61785.1|1981800_1982142_-	phage protein	NA	A0A2H4PQL5	Staphylococcus_phage	100.0	3.5e-56
SQE61786.1|1982162_1982657_-	phage protein	NA	R4IFM1	Staphylococcus_phage	100.0	4.3e-87
SQE61787.1|1982718_1983279_-	phage protein	NA	A0A0H4ITY2	Staphylococcus_phage	100.0	5.9e-101
SQE61788.1|1983265_1983703_-	phage protein	NA	A0A0E3T9M9	Staphylococcus_phage	100.0	2.1e-77
SQE61789.1|1983715_1984129_-	HK97 family phage protein	NA	R4IG77	Staphylococcus_phage	100.0	2.0e-77
SQE61790.1|1984115_1984451_-|head,tail	putative phage head-tail adaptor protein	head,tail	A0A2H4PQL0	Staphylococcus_phage	100.0	3.0e-60
SQE61791.1|1984443_1984758_-	putative phage DNA-packaging protein	NA	R4IFL8	Staphylococcus_phage	100.0	4.0e-54
SQE61792.1|1984757_1985084_-	Rho termination factor domain-containing protein	NA	A0A0E3TAL3	Staphylococcus_phage	100.0	4.3e-51
SQE61793.1|1985100_1985925_-|capsid	putative phage major capsid protein	capsid	R4IH32	Staphylococcus_phage	100.0	5.6e-148
SQE61794.1|1985945_1986542_-	phage minor structural GP20	NA	R4IG73	Staphylococcus_phage	100.0	5.6e-73
SQE61795.1|1986646_1986853_-|tRNA	putative seryl-tRNA synthetase	tRNA	A0A0N9BB04	Staphylococcus_phage	100.0	3.2e-28
SQE61796.1|1986854_1987820_-|head	phage minor head protein	head	A0A0N7E0U6	Staphylococcus_phage	96.5	6.7e-169
SQE61797.1|1987776_1989195_-|portal	SPP1 family phage portal protein	portal	R4IFL5	Staphylococcus_phage	99.8	2.3e-274
SQE61798.1|1989208_1990417_-|terminase	phage terminase large subunit	terminase	R4IG95	Staphylococcus_phage	100.0	6.1e-236
SQE61799.1|1990409_1990904_-|terminase	phage terminase small subunit	terminase	R4IH30	Staphylococcus_phage	100.0	1.1e-74
SQE61800.1|1991255_1991657_-	putative phi PVL-like protein	NA	A0A2H4PQK5	Staphylococcus_phage	100.0	5.6e-69
SQE61801.1|1991657_1991834_-	transcriptional activator rinb-like protein	NA	Q4ZAX6	Staphylococcus_virus	98.3	8.5e-22
SQE61802.1|1991823_1992060_-	phage protein	NA	A7TWB3	Staphylococcus_phage	100.0	1.9e-37
SQE61803.1|1992084_1992321_-	phage protein	NA	C8CH06	Staphylococcus_phage	100.0	1.1e-35
SQE61804.1|1992357_1992888_-	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	C8CH05	Staphylococcus_phage	100.0	1.7e-94
SQE61805.1|1992880_1993129_-	Phage protein	NA	S4V7K0	Staphylococcus_phage	98.8	2.7e-37
SQE61806.1|1993121_1993430_-	PV83 orf 27-like protein	NA	R4IFL1	Staphylococcus_phage	100.0	4.8e-52
SQE61807.1|1993426_1993774_-	yopX family protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
SQE61808.1|1993770_1994172_-	phage protein	NA	Q4ZAC1	Staphylococcus_virus	100.0	1.1e-69
SQE61809.1|1994184_1994427_-	phage family protein	NA	Q4ZBD5	Staphylococcus_virus	98.8	1.9e-40
SQE61810.1|1994430_1994787_-	PVL ORF-50 family protein	NA	A0A2I6PDX2	Staphylococcus_phage	100.0	1.1e-60
SQE61811.1|1994787_1994973_-	phage protein	NA	A0A068A236	Staphylococcus_phage	90.2	1.5e-24
SQE61812.1|1994972_1995380_-	phage protein	NA	D2JGK8	Staphylococcus_phage	100.0	1.7e-73
SQE61813.1|1995389_1995611_-	putative phi ETA-like protein	NA	Q4ZBL4	Staphylococcus_phage	100.0	1.7e-35
SQE61814.1|1995623_1995785_-	Uncharacterised protein	NA	A0A0H4IU12	Staphylococcus_phage	100.0	1.0e-21
SQE61815.1|1995778_1996558_-	phage like DNA replication protein dnaC	NA	A7YGR0	Staphylococcus_virus	99.2	1.6e-144
SQE61816.1|1996567_1997305_-	putative phage replication protein	NA	Q6R839	Staphylococcus_virus	81.4	5.6e-99
SQE61817.1|1997368_1998226_+	Uncharacterised protein	NA	Q4ZBL8	Staphylococcus_phage	100.0	9.5e-159
SQE61818.1|1998218_1998335_-	Uncharacterised protein	NA	Q4ZBL9	Staphylococcus_phage	100.0	1.3e-10
SQE61819.1|1998331_1998703_-	phage protein	NA	A1KX69	Staphylococcus_virus	99.2	8.8e-69
SQE61820.1|1998753_1999005_-	phage protein	NA	G4KNN9	Staphylococcus_phage	100.0	3.8e-39
SQE61821.1|1999016_1999460_-	ssDNA-binding protein	NA	A0A2I6PD99	Staphylococcus_phage	95.9	3.2e-73
SQE61822.1|1999456_2000107_-	ERF superfamily	NA	A0A0F6N3I5	Staphylococcus_phage	99.5	4.3e-119
SQE61823.1|2000107_2000644_-	bacteriophage Mu Gam-like protein	NA	A0A2I6PD93	Staphylococcus_phage	100.0	1.7e-81
SQE61824.1|2000656_2000917_-	putative phi PVL-like protein	NA	A0A059T5A3	Staphylococcus_phage	100.0	1.2e-43
SQE61825.1|2001010_2001331_-	Uncharacterised protein	NA	S4V968	Staphylococcus_phage	100.0	4.8e-55
SQE61826.1|2001331_2001499_-	phage protein	NA	S4V7J2	Staphylococcus_phage	94.5	3.1e-21
SQE61827.1|2001511_2001721_-	Uncharacterised protein	NA	A0A2H4PQR1	Staphylococcus_phage	100.0	9.7e-33
SQE61828.1|2001815_2002016_-	prophage L54a, antirepressor	NA	M9NS32	Staphylococcus_phage	90.6	2.9e-26
SQE61829.1|2002072_2002675_+	phage protein	NA	B7T096	Staphylococcus_virus	98.0	9.8e-102
SQE61830.1|2002687_2002828_-	phage protein	NA	A0A0H4ITW0	Staphylococcus_phage	100.0	5.5e-16
SQE61831.1|2002811_2003594_-	putative phage anti-repressor protein	NA	A0A1W6JPN2	Staphylococcus_phage	100.0	6.7e-135
SQE61832.1|2003595_2003781_-	Helix-turn-helix	NA	A0A0H4IP57	Staphylococcus_phage	100.0	1.3e-25
SQE61833.1|2004226_2004709_+	phage protein	NA	A0A0N9BAX2	Staphylococcus_phage	100.0	1.1e-82
SQE61834.1|2004809_2004989_-	phage protein	NA	A0A0N9BAV3	Staphylococcus_phage	100.0	1.7e-25
SQE61835.1|2005007_2005238_-	Uncharacterised protein	NA	A0A0N9BAY2	Staphylococcus_phage	90.7	9.1e-32
SQE61836.1|2005389_2005704_+	helix-turn-helix domain-containing protein	NA	A0A0N9BAW4	Staphylococcus_phage	99.0	2.2e-52
SQE61837.1|2005716_2006178_+	pathogenicity island protein	NA	A0A0H3U308	Staphylococcus_phage	98.7	2.7e-83
SQE61838.1|2006195_2006699_+	putative lipoprotein	NA	A9CR44	Staphylococcus_phage	98.8	8.3e-46
SQE61839.1|2006945_2007995_+|integrase	putative integrase	integrase	A0A2H4JB53	uncultured_Caudovirales_phage	90.3	5.2e-183
2008054:2008072	attR	TTTACGGAAGGTAAGGGAT	NA	NA	NA	NA
>prophage 9
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	2088228	2215779	2951503	holin,tRNA,capsid,transposase,head,tail,protease,terminase	Staphylococcus_phage(82.11%)	148	NA	NA
SQE61908.1|2088228_2089656_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
SQE61909.1|2089668_2091126_-|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
SQE61910.1|2091127_2091430_-|tRNA	Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C	tRNA	NA	NA	NA	NA
SQE61911.1|2091796_2093335_+	Sodium/proline symporter	NA	NA	NA	NA	NA
SQE61912.1|2093423_2094623_-	Lipoprotein (pheromone precursor)	NA	NA	NA	NA	NA
SQE61913.1|2094635_2096639_-	DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
SQE61914.1|2096642_2098835_-	ATP-dependent DNA helicase UvrD/PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
SQE61915.1|2098831_2099524_-	geranylgeranylglyceryl diphosphate synthase	NA	NA	NA	NA	NA
SQE61916.1|2099695_2099998_-	His repressor	NA	NA	NA	NA	NA
SQE61917.1|2100106_2100469_-	adenylosuccinate lyase	NA	NA	NA	NA	NA
SQE61918.1|2100447_2101401_-	adenylosuccinate lyase	NA	NA	NA	NA	NA
SQE61919.1|2102261_2103428_+	Staphopain A precursor	NA	NA	NA	NA	NA
SQE61920.1|2103458_2103785_+|protease	putative cysteine protease inhibitor (Staphostatin A)	protease	NA	NA	NA	NA
SQE61921.1|2104076_2104250_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE61922.1|2104230_2104833_-	Uncharacterized protein conserved in bacteria (DUF2179)	NA	NA	NA	NA	NA
SQE61923.1|2105103_2105925_-	NH(3)-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
SQE61924.1|2105917_2107387_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
SQE61925.1|2107570_2108647_+	nitric-oxide synthase	NA	NA	NA	NA	NA
SQE61926.1|2108666_2109461_+	ACT domain protein	NA	NA	NA	NA	NA
SQE61927.1|2109650_2111213_-	sodium-dependent dicarboxylate transporter sdcS	NA	NA	NA	NA	NA
SQE61928.1|2111417_2112515_-	cell wall surface anchor family protein	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
SQE61929.1|2112886_2113447_+	Nicotinamidase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
SQE61930.1|2113499_2114429_+	inorganic pyrophosphatase	NA	NA	NA	NA	NA
SQE61931.1|2114848_2116228_+	Aldehyde dehydrogenase	NA	NA	NA	NA	NA
SQE61932.1|2116347_2117376_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
SQE61933.1|2117645_2118047_+	yolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
SQE61934.1|2118619_2118793_-	exported protein	NA	NA	NA	NA	NA
SQE61935.1|2119171_2120284_+	choloylglycine hydrolase	NA	NA	NA	NA	NA
SQE61936.1|2120340_2121183_-	exported protein	NA	NA	NA	NA	NA
SQE61937.1|2121179_2121737_-	Predicted membrane protein	NA	NA	NA	NA	NA
SQE61938.1|2121796_2122321_-	membrane protein	NA	NA	NA	NA	NA
SQE61939.1|2122441_2123005_+	Thioredoxin	NA	NA	NA	NA	NA
SQE61940.1|2123070_2123811_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
SQE61941.1|2123810_2124683_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
SQE61942.1|2124679_2125360_-	membrane protein	NA	NA	NA	NA	NA
SQE61943.1|2125360_2126257_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
SQE61944.1|2126253_2126634_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQE61945.1|2126897_2127074_-	membrane protein	NA	NA	NA	NA	NA
SQE61946.1|2127614_2128901_+	Aspartate aminotransferase	NA	NA	NA	NA	NA
SQE61947.1|2129224_2129515_-	truncated map-w protein; extracellular adherence protein of broad specificity Eap/Map	NA	NA	NA	NA	NA
SQE61948.1|2129525_2131280_-	MHC class II analog (pseudogene)	NA	NA	NA	NA	NA
SQE61949.1|2131665_2131851_+	beta-hemolysin	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	5.6e-24
SQE61950.1|2133040_2133391_-	Involved in expression of fibrinogen binding protein, phage associated	NA	A7TWS0	Staphylococcus_phage	100.0	7.5e-54
SQE61951.1|2134049_2134541_-	Staphylokinase	NA	A0A1X9H028	Staphylococcus_phage	100.0	9.5e-87
SQE61952.1|2134731_2135487_-	Autolysin	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
SQE61953.1|2135498_2135753_-|holin	Phage holin	holin	D2JLG4	Staphylococcus_phage	100.0	4.1e-41
SQE61954.1|2136290_2136521_-	phage protein	NA	D2JLG2	Staphylococcus_phage	100.0	1.2e-31
SQE61955.1|2136644_2136932_-	phage protein	NA	D2JLG1	Staphylococcus_phage	100.0	1.3e-43
SQE61956.1|2136978_2137131_-	phage protein	NA	D2JLG0	Staphylococcus_phage	100.0	5.2e-20
SQE61957.1|2137120_2140906_-	phage minor structural protein	NA	C8CH32	Staphylococcus_phage	99.8	0.0e+00
SQE61958.1|2140921_2142406_-	bacteriophage protein	NA	A0A1W6JPN0	Staphylococcus_phage	100.0	2.0e-297
SQE61959.1|2142402_2146932_-|tail	TP901 family phage tail tape measure protein	tail	A0A1W6JPL0	Staphylococcus_phage	100.0	0.0e+00
SQE61960.1|2146988_2147126_-	phage protein	NA	A0A1W6JPS1	Staphylococcus_phage	100.0	3.4e-18
SQE61961.1|2147176_2147527_-	phage protein	NA	G4KNQ8	Staphylococcus_phage	100.0	7.8e-59
SQE61962.1|2147843_2148485_-|tail	phage major tail protein	tail	C8CH27	Staphylococcus_phage	100.0	2.5e-119
SQE61963.1|2148485_2148893_-	putative bacteriophage protein	NA	G4KNQ6	Staphylococcus_phage	100.0	7.1e-72
SQE61964.1|2148889_2149294_-	phage protein	NA	A0A1W6JPJ1	Staphylococcus_phage	100.0	2.5e-69
SQE61965.1|2149290_2149653_-|head,tail	phage head-tail adaptor	head,tail	G4KNQ4	Staphylococcus_phage	100.0	4.4e-65
SQE61966.1|2149636_2149921_-	Gp6 protein	NA	A0A2I6PDJ5	Staphylococcus_phage	100.0	2.3e-45
SQE61967.1|2149910_2150195_-|terminase	phage terminase small subunit	terminase	A0A1W6JPL8	Staphylococcus_phage	100.0	2.3e-45
SQE61968.1|2150214_2151435_-|capsid	Phage major capsid protein	capsid	A0A075LYD8	Staphylococcus_phage	100.0	7.8e-231
SQE61969.1|2151382_2152120_-	ATP-dependent endopeptidase clp proteolytic subunit	NA	A0A1W6JPK0	Staphylococcus_phage	99.6	2.3e-129
SQE61970.1|2152103_2153267_-	Portal protein, phage associated	NA	A0A1W6JPQ9	Staphylococcus_phage	100.0	1.8e-216
SQE61971.1|2153282_2154944_-|terminase	Phage terminase large subunit	terminase	Q8LTH3	Staphylococcus_phage	100.0	0.0e+00
SQE61972.1|2154940_2155285_-	phage protein	NA	G4KNP9	Staphylococcus_phage	100.0	9.4e-57
SQE61973.1|2155415_2155715_-	phage-associated homing endonuclease	NA	A0EWY8	Staphylococcus_phage	100.0	4.6e-52
SQE61974.1|2155946_2156363_-	phage transcriptional regulator	NA	G4KNP7	Staphylococcus_phage	100.0	1.3e-76
SQE61975.1|2156410_2156821_-	putative phi PVL-like protein	NA	C8CH13	Staphylococcus_phage	100.0	2.3e-70
SQE61976.1|2156927_2157074_-	phage protein	NA	Q4ZBJ8	Staphylococcus_phage	100.0	7.5e-16
SQE61977.1|2157074_2157440_-	phage protein	NA	Q4ZBJ9	Staphylococcus_phage	100.0	3.6e-59
SQE61978.1|2157440_2157614_-	phage transcriptional activator RinB	NA	C8CH09	Staphylococcus_phage	100.0	2.9e-22
SQE61979.1|2157610_2158000_-	phage protein	NA	C8CH08	Staphylococcus_phage	100.0	3.1e-64
SQE61980.1|2157989_2158226_-	phage protein	NA	A7TWB3	Staphylococcus_phage	93.6	7.6e-34
SQE61981.1|2158250_2158487_-	phage protein	NA	C8CH06	Staphylococcus_phage	97.4	4.5e-34
SQE61982.1|2158523_2159060_-	dUTPase family protein	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
SQE61983.1|2159052_2159301_-	Phage protein	NA	C8CH04	Staphylococcus_phage	98.8	1.6e-37
SQE61984.1|2159293_2159602_-	PV83 orf 27-like protein	NA	C8CH03	Staphylococcus_phage	100.0	9.6e-53
SQE61985.1|2159598_2159946_-	yopX family protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
SQE61986.1|2159942_2160344_-	phage protein	NA	C8CH01	Staphylococcus_phage	100.0	3.3e-69
SQE61987.1|2160356_2160599_-	phage family protein	NA	Q4ZDP7	Staphylococcus_virus	98.8	8.6e-41
SQE61988.1|2160604_2160859_-	phage protein	NA	D2JGL1	Staphylococcus_phage	100.0	1.3e-42
SQE61989.1|2160858_2161131_-	PVL ORF-50-like family	NA	D2JGL0	Staphylococcus_phage	100.0	4.2e-44
SQE61990.1|2161219_2161405_-	Protein of uncharacterised function (DUF3113)	NA	D2JGK9	Staphylococcus_phage	100.0	7.0e-27
SQE61991.1|2161404_2161812_-	phage protein	NA	D2JGK8	Staphylococcus_phage	100.0	1.7e-73
SQE61992.1|2161821_2162043_-	putative phi ETA-like protein	NA	Q9G021	Staphylococcus_phage	100.0	1.3e-35
SQE61993.1|2162045_2162261_-	hypothetical phage-related protein	NA	C8CGZ4	Staphylococcus_phage	100.0	3.7e-35
SQE61994.1|2162257_2163499_-	prophage L54a, replicative DNA helicase	NA	A9CR70	Staphylococcus_phage	99.8	3.3e-229
SQE61995.1|2163495_2163852_-	phage protein	NA	M9NS37	Staphylococcus_phage	100.0	8.2e-64
SQE61996.1|2163851_2164646_-	phi PV83 orf 20-like protein	NA	Q8SDW2	Staphylococcus_phage	98.5	3.9e-106
SQE61997.1|2164617_2165313_-	phage protein	NA	Q9MBS0	Staphylococcus_prophage	96.5	8.9e-131
SQE61998.1|2165326_2165755_-	Single-stranded DNA-binding protein, phage associated	NA	B2ZYV4	Staphylococcus_phage	100.0	3.9e-60
SQE61999.1|2165754_2166378_-	putative phage topoisomerase	NA	A0A2H4PQQ6	Staphylococcus_phage	100.0	1.4e-114
SQE62000.1|2166370_2166592_-	phage protein	NA	A7TWM6	Staphylococcus_phage	100.0	3.2e-34
SQE62001.1|2166601_2166862_-	phage protein	NA	Q4ZDA1	Staphylococcus_virus	100.0	1.2e-43
SQE62002.1|2166958_2167120_-	phage protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
SQE62003.1|2167116_2167437_-	Uncharacterized protein conserved in bacteria	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
SQE62004.1|2167569_2168127_+	phage protein	NA	A0A2I6PDF5	Staphylococcus_phage	100.0	1.1e-99
SQE62005.1|2168141_2168282_-	phage protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
SQE62006.1|2168312_2168507_-	Phage protein	NA	A0A1X9H0A2	Staphylococcus_phage	100.0	1.5e-19
SQE62007.1|2168523_2169276_-	antirepressor	NA	A0A1X9H0A0	Staphylococcus_phage	100.0	8.7e-140
SQE62008.1|2169332_2169872_+	putative phi PVL-like protein	NA	A7TW92	Staphylococcus_phage	100.0	1.5e-96
SQE62009.1|2169895_2170156_-	putative phi PVL-like protein	NA	A0A2I6PDT7	Staphylococcus_phage	100.0	3.5e-40
SQE62010.1|2170168_2170918_-	putative phage anti-repressor protein	NA	A0A1W6JPN2	Staphylococcus_phage	100.0	2.0e-136
SQE62011.1|2170974_2171184_+	Uncharacterised protein	NA	A0A2I6PDR8	Staphylococcus_phage	100.0	9.1e-31
SQE62012.1|2171176_2171317_-	phage protein	NA	A0A2I6PDT8	Staphylococcus_phage	100.0	1.9e-16
SQE62013.1|2171331_2171775_-	hypothetical phage-related protein	NA	W5R971	Staphylococcus_phage	100.0	1.5e-75
SQE62014.1|2171787_2172030_-	phage DNA-binding protein	NA	A0A1X9H035	Staphylococcus_phage	98.8	3.6e-39
SQE62015.1|2172193_2172910_+	putative phage repressor protein	NA	A0A1X9H038	Staphylococcus_phage	99.6	1.6e-130
SQE62016.1|2172921_2173077_+	phage protein	NA	A0A2I6PDR9	Staphylococcus_phage	100.0	6.3e-21
SQE62017.1|2173063_2173249_+	phage protein	NA	A0A2I6PDS4	Staphylococcus_phage	100.0	2.3e-25
SQE62018.1|2173448_2173616_+	Putative cytosolic protein	NA	Q4ZDJ4	Staphylococcus_virus	100.0	1.7e-24
SQE62019.1|2173755_2174295_+	PemK-like growth inhibitor protein	NA	U5U4R0	Staphylococcus_phage	33.1	9.0e-14
SQE62020.1|2174467_2175505_+	DNA integration/recombination/inversion protein	NA	A0A1X9H022	Staphylococcus_phage	100.0	2.6e-179
SQE62021.1|2175561_2176386_+	phospholipase C	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
SQE62022.1|2176623_2177640_-	gamma-hemolysin component B	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
SQE62023.1|2177661_2178717_-	Leukocidin S subunit	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
SQE62024.1|2179056_2180229_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE62025.1|2180483_2181707_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
SQE62026.1|2182078_2182924_-	tetracenomycin polyketide synthesis O-methyltransferase TcmP	NA	NA	NA	NA	NA
SQE62027.1|2182985_2183897_-	ferric hydroxamate receptor 1	NA	NA	NA	NA	NA
SQE62028.1|2183952_2185125_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE62029.1|2185389_2186697_+	Na+-transporting ATP synthase	NA	NA	NA	NA	NA
SQE62030.1|2187549_2187993_-	GCN5-related N-acetyltransferase (GNAT)	NA	NA	NA	NA	NA
SQE62031.1|2188157_2188499_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62032.1|2188852_2189443_-|terminase	putative phage terminase	terminase	Q4ZE85	Staphylococcus_phage	95.8	1.1e-97
SQE62033.1|2190353_2191970_-	heat shock protein 60 family chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	1.2e-157
SQE62034.1|2192045_2192330_-	Heat shock protein 60 family co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
SQE62035.1|2192504_2193248_+	abortive infection protein	NA	NA	NA	NA	NA
SQE62036.1|2193272_2194532_-	membrane anchored protein	NA	NA	NA	NA	NA
SQE62037.1|2194728_2195355_+	nitroreductase family protein	NA	NA	NA	NA	NA
SQE62038.1|2195715_2196501_+	Aliphatic amidase amiE	NA	NA	NA	NA	NA
SQE62039.1|2197413_2198037_+	accessory gene regulator protein B AGRB	NA	NA	NA	NA	NA
SQE62040.1|2198033_2198174_+	Regulator protein agrD	NA	NA	NA	NA	NA
SQE62041.1|2198198_2199491_+	Regulator protein agrC	NA	NA	NA	NA	NA
SQE62042.1|2199509_2199998_+	accessory gene regulator protein A	NA	NA	NA	NA	NA
SQE62043.1|2200593_2201553_-	Fructokinase	NA	NA	NA	NA	NA
SQE62044.1|2201549_2203034_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	3.0e-19
SQE62045.1|2203182_2204133_-	Sucrose operon repressor ScrR, LacI family	NA	NA	NA	NA	NA
SQE62046.1|2204315_2205512_-	ammonium transporter family protein	NA	H8ZJB2	Ostreococcus_tauri_virus	31.1	2.4e-38
SQE62047.1|2205615_2206788_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE62048.1|2207104_2207329_-	transcriptional regulator	NA	NA	NA	NA	NA
SQE62049.1|2207388_2208468_-	putative transport system permease protein	NA	NA	NA	NA	NA
SQE62050.1|2208771_2209407_-	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	NA	NA	NA	NA	NA
SQE62051.1|2209659_2211588_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.4	5.4e-53
SQE62052.1|2211949_2213560_+	MutS-related protein, family 1	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	3.3e-19
SQE62053.1|2213661_2214687_-|protease	glycoprotease	protease	A0A0R6PI74	Moraxella_phage	40.9	6.9e-63
SQE62054.1|2214679_2215144_-	Ribosomal-protein-S18p-alanine acetyltransferase	NA	NA	NA	NA	NA
SQE62055.1|2215116_2215779_-|protease	Inactive protein of metal-dependent protease family, putative molecular chaperone	protease	NA	NA	NA	NA
>prophage 10
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	2630213	2682685	2951503	holin,transposase	Bacillus_virus(18.18%)	50	NA	NA
SQE62445.1|2630213_2630909_-|holin	putative glycine betaine/carnitine/choline transport system permease protein	holin	NA	NA	NA	NA
SQE62446.1|2630908_2631850_-|holin	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	holin	NA	NA	NA	NA
SQE62447.1|2631866_2632502_-|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	holin	G3M9Y4	Bacillus_virus	26.2	9.0e-05
SQE62448.1|2632498_2633725_-|holin	glycine betaine/carnitine/choline ABC transporter, ATP-binding protein, putative	holin	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
SQE62449.1|2634394_2634994_-	molecular chaperone GroEL	NA	NA	NA	NA	NA
SQE62450.1|2635173_2636811_+	Amino acid permease	NA	NA	NA	NA	NA
SQE62451.1|2637418_2638771_+	Carboxylesterase type B	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
SQE62452.1|2638832_2640020_-	chloramphenicol resistance protein	NA	NA	NA	NA	NA
SQE62453.1|2640415_2641192_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
SQE62454.1|2641184_2641847_-	Methionine ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.2	6.5e-22
SQE62455.1|2642094_2643171_-	endoglucanase M	NA	NA	NA	NA	NA
SQE62456.1|2643525_2643792_-	addiction module toxin	NA	NA	NA	NA	NA
SQE62457.1|2643791_2644049_-	prevent-host-death family protein	NA	NA	NA	NA	NA
SQE62458.1|2644407_2644863_+	lipoprotein	NA	NA	NA	NA	NA
SQE62459.1|2645030_2646608_-	Ferredoxin-dependent glutamate synthase	NA	NA	NA	NA	NA
SQE62460.1|2646802_2647552_+	membrane protein	NA	NA	NA	NA	NA
SQE62461.1|2647775_2648969_-	Antibiotic resistance protein	NA	NA	NA	NA	NA
SQE62462.1|2648980_2649730_-	nickel transport ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	4.0e-20
SQE62463.1|2649722_2650538_-	Oligopeptide transporter putative ATPase domain protein	NA	G9BWD6	Planktothrix_phage	30.3	1.8e-13
SQE62464.1|2650534_2651404_-	Oligopeptide transporter putative membrane permease domain protein	NA	NA	NA	NA	NA
SQE62465.1|2651400_2652336_-	Oligopeptide transporter putative membrane permease domain protein	NA	NA	NA	NA	NA
SQE62466.1|2652348_2653947_-	Oligopeptide transporter putative substrate binding domain protein	NA	NA	NA	NA	NA
SQE62467.1|2654089_2655391_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQE62468.1|2655383_2656202_-	nicotianamine synthase	NA	NA	NA	NA	NA
SQE62469.1|2656212_2657034_-	Putative Similar to diaminopimelate epimerase	NA	NA	NA	NA	NA
SQE62470.1|2657900_2658266_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62471.1|2658528_2659248_-	Glutamate dehydrogenase	NA	A0A0G2Y8L6	Acanthamoeba_polyphaga_mimivirus	36.5	2.9e-07
SQE62472.1|2659579_2661118_+	aminobenzoyl-glutamate transport protein	NA	NA	NA	NA	NA
SQE62473.1|2661229_2661652_-|transposase	transposase	transposase	NA	NA	NA	NA
SQE62474.1|2662103_2662523_-	Protein of uncharacterised function (DUF1433)	NA	NA	NA	NA	NA
SQE62475.1|2662540_2662960_-	Protein of uncharacterised function (DUF1433)	NA	NA	NA	NA	NA
SQE62476.1|2663226_2663649_-	Protein of uncharacterised function (DUF1433)	NA	NA	NA	NA	NA
SQE62477.1|2663899_2664595_-	Short-chain alcohol dehydrogenase	NA	W8CYX9	Bacillus_phage	36.5	8.6e-09
SQE62478.1|2664883_2665165_+	IraB protein	NA	NA	NA	NA	NA
SQE62479.1|2665424_2665616_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62480.1|2666097_2666190_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62481.1|2666176_2666971_-	lipoprotein	NA	NA	NA	NA	NA
SQE62482.1|2667082_2667859_-	putative lipoprotein	NA	NA	NA	NA	NA
SQE62483.1|2668161_2671023_-	DNA/RNA helicase of DEAD/DEAH box family	NA	Q5YA94	Bacillus_phage	27.9	2.4e-28
SQE62484.1|2671024_2671417_-	7,8-dihydro-8-oxoguanine-triphosphatase	NA	NA	NA	NA	NA
SQE62485.1|2671704_2673342_+	Phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	38.1	1.7e-95
SQE62486.1|2673625_2673892_+	exported protein	NA	NA	NA	NA	NA
SQE62487.1|2674035_2674344_+	membrane protein	NA	NA	NA	NA	NA
SQE62488.1|2674451_2674622_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62489.1|2674665_2675859_-	Macrolide-efflux protein	NA	NA	NA	NA	NA
SQE62490.1|2676242_2676833_-	Virulence-associated cell-wall-anchored protein SasG (LPXTG motif), binding to squamous nasal epithelial cells	NA	NA	NA	NA	NA
SQE62491.1|2679309_2680128_-	cell wall surface anchor family protein	NA	NA	NA	NA	NA
SQE62492.1|2680364_2680742_-	surface protein G1	NA	NA	NA	NA	NA
SQE62493.1|2681047_2681368_-	Transcriptional regulator SarT (Staphylococcal accessory regulator T)	NA	NA	NA	NA	NA
SQE62494.1|2681512_2682685_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
>prophage 11
LS483309	Staphylococcus aureus strain NCTC9944 genome assembly, chromosome: 1	2951503	2736200	2792116	2951503	transposase,integrase,lysis,protease	Staphylococcus_phage(25.0%)	53	2781047:2781063	2797163:2797179
SQE62543.1|2736200_2737373_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE62544.1|2737712_2737970_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62545.1|2738548_2739826_-	3-hydroxy-3-methylglutaryl-coenzyme A reductase	NA	NA	NA	NA	NA
SQE62546.1|2740079_2741246_+	Hydroxymethylglutaryl-CoA synthase	NA	NA	NA	NA	NA
SQE62547.1|2741415_2741937_-	methylated-DNA--protein-cysteine methyltransferase	NA	M1PFU9	Streptococcus_phage	41.1	2.0e-26
SQE62548.1|2742346_2744452_+|protease	putative ATP-dependent protease ATP-binding subunit ClpL	protease	H6X3M6	Enterobacteria_phage	38.5	3.1e-118
SQE62549.1|2744520_2744691_-	virus attachment p12 family protein	NA	NA	NA	NA	NA
SQE62550.1|2744703_2745975_-	ferrous iron transport protein B	NA	NA	NA	NA	NA
SQE62551.1|2745923_2746697_-	Ferrous iron transport protein B	NA	NA	NA	NA	NA
SQE62552.1|2746708_2746936_-	feoA domain protein	NA	NA	NA	NA	NA
SQE62553.1|2747151_2749620_-	Putative antibiotic transport-associated protein	NA	NA	NA	NA	NA
SQE62554.1|2749785_2750334_+	TetR family regulatory protein	NA	NA	NA	NA	NA
SQE62555.1|2750689_2752234_-	Delta-1-pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA	NA
SQE62556.1|2752423_2753023_-	O-acetyltransferase (cell wall biosynthesis)	NA	NA	NA	NA	NA
SQE62557.1|2753261_2753453_+	exported protein	NA	NA	NA	NA	NA
SQE62558.1|2753692_2755336_+	Copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	40.6	2.4e-81
SQE62559.1|2755421_2756102_+	Copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	44.1	2.8e-36
SQE62560.1|2756646_2756853_+	CopZ	NA	NA	NA	NA	NA
SQE62561.1|2756942_2757971_-	D-lactate dehydrogenase	NA	M1HKI4	Acanthocystis_turfacea_Chlorella_virus	30.2	3.6e-35
SQE62562.1|2757963_2759118_-	aspartate aminotransferase	NA	NA	NA	NA	NA
SQE62563.1|2759544_2761053_-	Dehydrosqualene desaturase (Diapophytoene desaturase) (4,4-diapophytoene desaturase)	NA	NA	NA	NA	NA
SQE62564.1|2761064_2761928_-	dehydrosqualene synthase	NA	NA	NA	NA	NA
SQE62565.1|2761964_2763092_-	Hpnb	NA	NA	NA	NA	NA
SQE62566.1|2763097_2764591_-	Phytoene desaturase, neurosporene or lycopene producing / 4,4-diapolycopene oxidase	NA	NA	NA	NA	NA
SQE62567.1|2764583_2765081_-	Glycosyl-4,4-diaponeurosporenoate acyltransferase precursor	NA	NA	NA	NA	NA
SQE62568.1|2765252_2766020_-	Secretory antigen precursor SsaA	NA	NA	NA	NA	NA
SQE62569.1|2766380_2768192_-	O-acetyltransferase oatA	NA	A0A1R3Y5Q6	Salmonella_virus	31.5	1.3e-35
SQE62570.1|2768877_2769579_-	Immunodominant staphylococcal antigen A precursor	NA	Q4Z8Z7	Staphylococcus_phage	46.8	2.1e-39
SQE62571.1|2770186_2771242_-	membrane spanning protein	NA	NA	NA	NA	NA
SQE62572.1|2771634_2772222_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
SQE62573.1|2772599_2772920_+	Uncharacterised protein	NA	NA	NA	NA	NA
SQE62574.1|2773139_2773370_+	putative DUF896-containing protein	NA	NA	NA	NA	NA
SQE62575.1|2773532_2773910_-	glyoxalase	NA	NA	NA	NA	NA
SQE62576.1|2773926_2774748_-	NAD dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
SQE62577.1|2774766_2775066_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQE62578.1|2775196_2775754_+	Transcriptional regulator, TetR family	NA	NA	NA	NA	NA
SQE62579.1|2775746_2776451_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
SQE62580.1|2776548_2777559_+	5-carboxyvanillic acid decarboxylase	NA	NA	NA	NA	NA
SQE62581.1|2777578_2778409_+	Esterase/Lipase	NA	NA	NA	NA	NA
SQE62582.1|2778555_2779446_-	Putative GTPases (G3E family)	NA	NA	NA	NA	NA
SQE62583.1|2779545_2780886_-	ferrous iron transporter protein B	NA	NA	NA	NA	NA
SQE62584.1|2780879_2781986_-	monooxygenase	NA	NA	NA	NA	NA
2781047:2781063	attL	CATTATCATTTTCAACT	NA	NA	NA	NA
SQE62585.1|2782380_2782734_-|transposase	putative transposase	transposase	Q9MBM9	Staphylococcus_prophage	46.6	8.8e-18
SQE62586.1|2783017_2783833_-	putative ATP-binding protein	NA	NA	NA	NA	NA
SQE62587.1|2783825_2785268_-|integrase	integrase core domain-containing protein	integrase	NA	NA	NA	NA
SQE62588.1|2785239_2785833_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	51.1	1.1e-41
SQE62589.1|2786096_2786477_-	penicillinase repressor	NA	NA	NA	NA	NA
SQE62590.1|2786466_2788224_-	regulatory protein BlaR1	NA	NA	NA	NA	NA
SQE62591.1|2788330_2789176_+	beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	34.0	1.5e-31
SQE62592.1|2789436_2789952_-|transposase	putative transposase	transposase	NA	NA	NA	NA
SQE62593.1|2790060_2790417_-	lipoprotein	NA	NA	NA	NA	NA
SQE62594.1|2790472_2791063_-	transposon-related protein	NA	NA	NA	NA	NA
SQE62595.1|2791069_2792116_-|lysis	putative cell wall lysis protein	lysis	A0A1X9I9L1	Staphylococcus_phage	36.9	8.1e-19
2797163:2797179	attR	CATTATCATTTTCAACT	NA	NA	NA	NA
