The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	410230	426921	2935845	terminase,transposase	Staphylococcus_phage(100.0%)	28	NA	NA
SQE35295.1|410230_410422_-	Uncharacterised protein	NA	U3PCX8	Staphylococcus_phage	80.0	4.9e-23
SQE35296.1|410665_410962_+	30S ribosomalprotein S6p	NA	NA	NA	NA	NA
SQE35297.1|410982_411486_+	single-stranded DNA-binding protein	NA	A0A1W6JPL9	Staphylococcus_phage	74.7	1.2e-60
SQE35298.1|411537_411780_+	30S ribosomalprotein S18p	NA	NA	NA	NA	NA
SQE35299.1|412008_412806_-	PemK-like growth inhibitor	NA	Q4ZE81	Staphylococcus_phage	100.0	7.1e-108
SQE35300.1|412829_414044_-	Integrase	NA	Q4ZE80	Staphylococcus_phage	100.0	4.0e-227
SQE35301.1|414204_414828_-	DNA-binding protein	NA	NA	NA	NA	NA
SQE35302.1|414976_415141_+	putative DNA-binding protein	NA	NA	NA	NA	NA
SQE35303.1|415141_415414_+	pathogenicity island DNA-binding protein	NA	Q4ZE77	Staphylococcus_phage	94.4	1.2e-43
SQE35304.1|415425_415599_+	hypothetical bovine pathogenicity island protein	NA	NA	NA	NA	NA
SQE35305.1|415565_415769_+	pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	98.5	2.0e-30
SQE35306.1|415770_416154_+	pathogenicity island protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.9	1.3e-62
SQE35307.1|416154_416481_+	mobile element-associated protein	NA	Q4ZE75	Staphylococcus_phage	94.4	1.1e-51
SQE35308.1|416544_417414_+	pathogenicity island protein	NA	A0A1W6JQL5	Staphylococcus_phage	93.1	6.9e-157
SQE35309.1|417430_418888_+	pathogenicity island protein	NA	A0A1W6JQD6	Staphylococcus_phage	96.1	1.0e-277
SQE35310.1|419188_419551_+	pathogenicity island protein	NA	A0A1W6JQD5	Staphylococcus_phage	99.2	8.9e-66
SQE35311.1|419552_419837_+	pathogenicity island protein	NA	A0A1W6JQE4	Staphylococcus_phage	95.7	1.9e-47
SQE35312.1|419833_420475_+|transposase	transposase	transposase	Q4ZE67	Staphylococcus_phage	96.7	3.5e-113
SQE35313.1|421010_421352_+	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
SQE35314.1|421382_422036_+	Uncharacterised protein	NA	Q4ZE82	Staphylococcus_phage	99.1	8.4e-115
SQE35315.1|422088_422616_+	pathogenicity island protein	NA	Q4ZE87	Staphylococcus_phage	97.7	4.9e-89
SQE35316.1|422618_422960_+|transposase	transposase	transposase	Q4ZE86	Staphylococcus_phage	98.2	8.4e-58
SQE35317.1|422956_423526_+|terminase	putative phage terminase	terminase	A0A1W6JQF0	Staphylococcus_phage	97.9	4.6e-101
SQE35318.1|423954_424473_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQE35319.1|424469_424898_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQE35320.1|424884_425664_+	pathogenicity island protein	NA	NA	NA	NA	NA
SQE35321.1|426009_426291_+	pathogenicity island protein	NA	Q4ZE84	Staphylococcus_phage	85.0	3.7e-19
SQE35322.1|426408_426921_+	pathogenicity island protein	NA	Q4ZE83	Staphylococcus_phage	100.0	1.4e-69
>prophage 2
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	773163	780984	2935845		Hokovirus(16.67%)	10	NA	NA
SQE35640.1|773163_774219_-	Sensor histidine protein kinase SaeS (exoprotein expression protein S)	NA	A0A1V0SGX0	Hokovirus	30.0	2.1e-14
SQE35641.1|774218_774905_-	Response regulator SaeR	NA	NA	NA	NA	NA
SQE35642.1|774879_775353_-	DoxX family protein	NA	NA	NA	NA	NA
SQE35643.1|775695_776136_-	lipoprotein	NA	NA	NA	NA	NA
SQE35644.1|776415_777000_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE35645.1|777098_777812_-	Queuosine Biosynthesis QueE Radical SAM	NA	A0A1U9WRB6	Streptococcus_virus	43.5	6.5e-52
SQE35646.1|777815_778235_-	6-pyruvoyl-tetrahydropterin synthase	NA	S4U060	uncultured_phage	28.7	6.3e-07
SQE35647.1|778236_778905_-	Queuosine Biosynthesis QueC ATPase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	57.5	9.6e-66
SQE35648.1|779255_779849_+	Para-aminobenzoate synthase, amidotransferase component PabAb	NA	A0A0P0IKJ1	Acinetobacter_phage	42.9	4.4e-38
SQE35649.1|779832_780984_+	Para-aminobenzoate synthetase component I	NA	A0A0B5J984	Pandoravirus	35.7	1.6e-23
>prophage 3
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	792956	807743	2935845		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
SQE35658.1|792956_794015_+	histidinol-phosphate aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	26.7	7.9e-22
SQE35659.1|794365_794908_+	5'-3'-deoxyribonucleotidase, putative	NA	NA	NA	NA	NA
SQE35660.1|795587_796505_-	Transcription regulator (contains diacylglycerol kinase catalytic domain)	NA	A0A1V0SBJ0	Catovirus	22.0	3.7e-07
SQE35661.1|796774_798280_-	Di/tripeptide permease YjdL	NA	A0A0P0IY73	Acinetobacter_phage	32.2	2.0e-58
SQE35662.1|798620_799121_-	NADPH dependent preQ0 reductase	NA	E7DN65	Pneumococcus_phage	71.5	5.9e-52
SQE35663.1|799140_800007_-	Integral membrane domain protein	NA	NA	NA	NA	NA
SQE35664.1|800807_801206_+	Nrdi	NA	A0A2H4J545	uncultured_Caudovirales_phage	72.0	1.2e-52
SQE35665.1|801168_803274_+	ribonucleotide-diphosphate reductase subunit alpha	NA	A0A2H4J2N6	uncultured_Caudovirales_phage	91.7	0.0e+00
SQE35666.1|803391_804363_+	ribonucleoside-diphosphate reductase subunit beta	NA	A0A2H4J4P3	uncultured_Caudovirales_phage	91.3	4.2e-171
SQE35667.1|805028_806042_+	FatD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	78.0	2.2e-138
SQE35668.1|806028_806985_+	Iron compound ABC uptake transporter permease protein	NA	A0A2H4J116	uncultured_Caudovirales_phage	57.8	1.2e-05
SQE35669.1|806981_807743_+	Iron compound ABC uptake transporter ATP-binding protein	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	31.6	8.5e-18
>prophage 4
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1057731	1066204	2935845		Synechococcus_phage(33.33%)	9	NA	NA
SQE35902.1|1057731_1058214_+	AIR carboxylase	NA	A0A2P0VNU7	Tetraselmis_virus	44.7	6.2e-22
SQE35903.1|1058200_1059325_+	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	NA	NA	NA	NA
SQE35904.1|1059328_1060033_+	Phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	M4R1E8	Synechococcus_phage	42.1	7.3e-48
SQE35905.1|1060032_1060296_+	Phosphoribosylformylglycinamidine synthase, PurS subunit	NA	NA	NA	NA	NA
SQE35906.1|1060297_1060969_+	Phosphoribosylformylglycinamidine synthase	NA	NA	NA	NA	NA
SQE35907.1|1060961_1063151_+	Phosphoribosylformylglycinamidine synthase, synthetase subunit	NA	A6N228	Microbacterium_phage	39.7	1.0e-140
SQE35908.1|1063129_1064614_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	31.7	3.2e-45
SQE35909.1|1064606_1065635_+	Phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	41.4	1.3e-61
SQE35910.1|1065637_1066204_+	Phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	40.1	6.1e-29
>prophage 5
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1424843	1479805	2935845	lysis,transposase	Staphylococcus_phage(37.5%)	41	NA	NA
SQE36241.1|1424843_1426109_+	Diaminopimelate decarboxylase	NA	A0A0P0YM38	Yellowstone_lake_phycodnavirus	23.2	6.2e-13
SQE36242.1|1426348_1426522_-	Protein msa	NA	NA	NA	NA	NA
SQE36243.1|1426584_1427757_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36244.1|1427783_1427993_-	Protein msa (Modulator of sarA)	NA	NA	NA	NA	NA
SQE36245.1|1428189_1428390_-	CSD family cold shock protein	NA	Q9AZD3	Lactococcus_phage	66.2	8.4e-18
SQE36246.1|1428560_1428869_-	DNA binding protein	NA	NA	NA	NA	NA
SQE36247.1|1429031_1429301_+	acylphosphatase	NA	NA	NA	NA	NA
SQE36248.1|1429325_1429949_+|lysis	5-bromo-4-chloroindolyl phosphate hydrolysis protein XpaC, putative	lysis	NA	NA	NA	NA
SQE36249.1|1429980_1431117_+	Tellurite resistance protein	NA	A0A291I9K4	Lactobacillus_phage	28.3	7.4e-34
SQE36250.1|1431384_1431777_-|transposase	putative transposase	transposase	A0A146ICT8	Staphylococcus_phage	93.2	7.7e-15
SQE36251.1|1432129_1433473_-	Branched-chain amino acid transport system carrier protein	NA	NA	NA	NA	NA
SQE36252.1|1433697_1435584_-	Nitric oxide reductase activation protein NorD	NA	NA	NA	NA	NA
SQE36253.1|1435597_1436389_-	Nitric oxide reductase activation protein NorQ	NA	R4TG24	Halovirus	34.2	3.3e-12
SQE36254.1|1436569_1436773_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36255.1|1436801_1437611_-	glyoxalase	NA	NA	NA	NA	NA
SQE36256.1|1438190_1439459_-	dihydrolipoamide succinyltransferase E2 component of 2-oxoglutarate dehydrogenase complex	NA	NA	NA	NA	NA
SQE36257.1|1439472_1442271_-	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
SQE36258.1|1442396_1443569_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36259.1|1443886_1445242_-	Two component system histidine kinase ArlS	NA	A0A1V0SGX0	Hokovirus	27.8	3.5e-14
SQE36260.1|1445238_1445898_-	Putative response regulator ArlR	NA	W8CYM9	Bacillus_phage	33.8	1.1e-34
SQE36261.1|1446810_1447296_+|transposase	IS605/IS200-like transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
SQE36262.1|1447426_1448041_-	type 2 phosphatidic acid phosphatase family protein	NA	NA	NA	NA	NA
SQE36263.1|1448057_1449128_-	UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase	NA	NA	NA	NA	NA
SQE36264.1|1449139_1449649_-	acetyltransferase	NA	NA	NA	NA	NA
SQE36265.1|1450048_1451539_-	carboxy-terminal processing proteinase ctpA	NA	A0A0R6PIZ1	Moraxella_phage	30.5	2.3e-22
SQE36266.1|1451730_1451952_-	hypothetical DUF1250-containing protein	NA	NA	NA	NA	NA
SQE36267.1|1451951_1452452_-	PTS system glucose-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQE36268.1|1452463_1452892_-	Peptide methionine sulfoxide reductase MsrB	NA	NA	NA	NA	NA
SQE36269.1|1452884_1453418_-	Peptide methionine sulfoxide reductase MsrA	NA	NA	NA	NA	NA
SQE36270.1|1453503_1454343_-	DegV family protein	NA	A0A0N9SI50	Staphylococcus_phage	77.3	2.3e-48
SQE36271.1|1454357_1454837_-	Dihydrofolate reductase	NA	A0A0N9S8H6	Staphylococcus_phage	79.9	2.0e-73
SQE36272.1|1455036_1455993_-	thymidylate synthase	NA	A0A0N9SH48	Staphylococcus_phage	85.2	1.6e-167
SQE36273.1|1456416_1456854_-	bacillithiol system oxidoreductase, YphP/YqiW family	NA	NA	NA	NA	NA
SQE36274.1|1456869_1457994_-	PBS lyase HEAT-like repeat domain protein	NA	NA	NA	NA	NA
SQE36275.1|1458031_1458283_-	PBS lyase HEAT-like repeat protein	NA	NA	NA	NA	NA
SQE36276.1|1458733_1459438_+	Putative preQ0 transporter	NA	A0A2H4J2N7	uncultured_Caudovirales_phage	23.8	8.4e-12
SQE36277.1|1459502_1459634_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36278.1|1459978_1460380_+	Ribonuclease HI	NA	NA	NA	NA	NA
SQE36279.1|1460438_1478516_-	cell wall associated fibronectin-binding protein	NA	NA	NA	NA	NA
SQE36280.1|1478784_1479138_-	Transposase	NA	Q9MBM9	Staphylococcus_prophage	46.6	8.8e-18
SQE36281.1|1479301_1479805_-|transposase	putative transposase	transposase	NA	NA	NA	NA
>prophage 6
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1528729	1619377	2935845	tail,transposase,protease,head,tRNA,portal,terminase,integrase,capsid	Staphylococcus_phage(80.0%)	108	1570887:1570904	1617894:1617911
SQE36314.1|1528729_1530022_-|tRNA	asparaginyl-tRNA synthetase	tRNA	A0A2P1EMB4	Moumouvirus	30.0	1.9e-54
SQE36315.1|1530343_1533037_-	dinG family ATP-dependent helicase YoaA	NA	A0A1X9I5C8	Streptococcus_phage	34.4	8.2e-47
SQE36316.1|1533060_1534032_-	Biotin-protein ligase / Biotin operon repressor	NA	NA	NA	NA	NA
SQE36317.1|1534018_1535221_-	poly A polymerase family protein	NA	H7BUW3	unidentified_phage	42.5	3.2e-35
SQE36318.1|1535225_1536368_-	glycosyl transferase	NA	NA	NA	NA	NA
SQE36319.1|1536608_1536926_-	Pyrophosphohydrolase, MazG family	NA	NA	NA	NA	NA
SQE36320.1|1537262_1537961_-	Neutral zinc metallopeptidase family	NA	NA	NA	NA	NA
SQE36321.1|1538014_1538203_-	Hypothetical transmembrane protein CDS_ID OB1773	NA	NA	NA	NA	NA
SQE36322.1|1538199_1538601_-	Hypothetical transmembrane protein CDS_ID OB1773	NA	NA	NA	NA	NA
SQE36323.1|1538590_1539178_-	Putative cytosolic protein	NA	G3MAV7	Bacillus_virus	27.2	2.8e-08
SQE36324.1|1539179_1540424_-	TPR-repeat-containing protein, putative component of Menaquinone-cytochrome C reductase	NA	NA	NA	NA	NA
SQE36325.1|1540430_1541729_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
SQE36326.1|1541738_1542803_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
SQE36327.1|1542828_1543995_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.1	7.6e-34
SQE36328.1|1544380_1544581_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36329.1|1544789_1545239_-	Nucleoside diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.8	2.4e-28
SQE36330.1|1545330_1546290_-	Farnesyl pyrophosphate synthetase	NA	A0A1V0SE37	Indivirus	24.4	1.3e-10
SQE36331.1|1546291_1547017_-	Ubiquinone/menaquinone biosynthesis methyltransferase UbiE	NA	NA	NA	NA	NA
SQE36332.1|1547019_1547592_-	heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 family protein	NA	NA	NA	NA	NA
SQE36333.1|1547765_1548938_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36334.1|1549488_1551093_+|transposase	transposase IS4 family protein	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
SQE36335.1|1551208_1551481_-	DNA-binding protein II HBsu	NA	A7KV42	Bacillus_phage	73.3	4.2e-28
SQE36336.1|1551651_1552650_-	Glycerol-3-phosphate dehydrogenase (NAD(P)+)	NA	NA	NA	NA	NA
SQE36337.1|1552666_1553977_-	GTP-binding protein EngA	NA	NA	NA	NA	NA
SQE36338.1|1554198_1555374_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
SQE36339.1|1556085_1556745_-	Cytidylate kinase	NA	NA	NA	NA	NA
SQE36340.1|1556821_1557790_+	L-asparaginase	NA	NA	NA	NA	NA
SQE36341.1|1557904_1558891_-	thioredoxin reductase	NA	NA	NA	NA	NA
SQE36342.1|1559292_1560753_-	elastin binding protein ebpS	NA	NA	NA	NA	NA
SQE36343.1|1560905_1562285_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	33.6	2.9e-56
SQE36344.1|1562274_1563228_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36345.1|1563335_1563584_+	Ferredoxin	NA	A0A127AYY7	Bacillus_phage	48.0	8.3e-15
SQE36346.1|1563689_1564235_-	riboflavin transporter	NA	NA	NA	NA	NA
SQE36347.1|1564831_1565134_-	lipoprotein	NA	NA	NA	NA	NA
SQE36348.1|1565108_1565747_-	lipoprotein	NA	NA	NA	NA	NA
SQE36349.1|1565761_1565968_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36350.1|1565960_1566839_-	lipoprotein	NA	NA	NA	NA	NA
SQE36351.1|1566955_1567873_-	putative lipoprotein with DUF1672	NA	NA	NA	NA	NA
SQE36352.1|1567963_1568179_-	lipoprotein	NA	A0ZS61	Staphylococcus_virus	100.0	2.0e-25
SQE36353.1|1568900_1570355_-	amidase	NA	A0A2I6PF47	Staphylococcus_phage	99.6	2.8e-288
SQE36354.1|1570365_1570668_-	SPP1 family prophage L54a	NA	A0A2I6PF56	Staphylococcus_phage	100.0	3.1e-48
SQE36355.1|1570803_1571103_-	hypothetical phage-related protein	NA	A0A2I6PER2	Staphylococcus_phage	100.0	2.0e-31
1570887:1570904	attL	TGTCTCTAATATTTTTAG	NA	NA	NA	NA
SQE36356.1|1571148_1571313_-	phage protein	NA	A0A2I6PES4	Staphylococcus_phage	100.0	4.9e-24
SQE36357.1|1571305_1571695_-	phage protein	NA	A0A2I6PER1	Staphylococcus_phage	100.0	2.2e-62
SQE36358.1|1571694_1573161_-|tail	putative phage tail protein	tail	B5WZQ8	Staphylococcus_phage	100.0	7.6e-257
SQE36359.1|1573160_1575071_-	putative minor structural protein	NA	A0A2I6PEQ9	Staphylococcus_phage	100.0	0.0e+00
SQE36360.1|1575086_1575377_-	putative gp53	NA	U5U457	Staphylococcus_phage	100.0	2.1e-49
SQE36361.1|1575376_1576960_-|tail	prophage endopeptidase tail family protein	tail	A0A2I6PEQ5	Staphylococcus_phage	100.0	9.3e-309
SQE36362.1|1576968_1577793_-|tail	phage tail family protein	tail	A0A2I6PER3	Staphylococcus_phage	100.0	4.1e-159
SQE36363.1|1577792_1580717_-	TP901 family prophage L54a	NA	U5U762	Staphylococcus_phage	99.2	0.0e+00
SQE36364.1|1580801_1583993_-	TP901 family prophage L54a	NA	U5U762	Staphylococcus_phage	100.0	0.0e+00
SQE36365.1|1584006_1584165_-	putative gp49	NA	A0A2I6PES8	Staphylococcus_phage	100.0	1.2e-19
SQE36366.1|1584206_1584557_-	putative gp48	NA	A0A2I6PEQ2	Staphylococcus_phage	100.0	1.1e-55
SQE36367.1|1584614_1585070_-|tail	major tail protein	tail	A0A2I6PER6	Staphylococcus_phage	100.0	5.7e-78
SQE36368.1|1585161_1585803_-|tail	major tail protein	tail	A0A2I6PEP6	Staphylococcus_phage	99.5	8.5e-120
SQE36369.1|1585837_1586233_-	phage protein	NA	A0A2I6PEQ4	Staphylococcus_phage	100.0	8.8e-67
SQE36370.1|1586233_1586635_-	putative phiSLT protein	NA	A0A2I6PF54	Staphylococcus_phage	100.0	8.1e-68
SQE36371.1|1586631_1586964_-	phage protein	NA	A0A2I6PES3	Staphylococcus_phage	100.0	4.1e-57
SQE36372.1|1586975_1587254_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	A0A2I6PEQ1	Staphylococcus_phage	100.0	2.1e-46
SQE36373.1|1587322_1588486_-|capsid	putative phage capsid protein	capsid	A0A2I6PEQ3	Staphylococcus_phage	100.0	1.2e-217
SQE36374.1|1588497_1589271_-|protease	phage protease	protease	A0A2I6PEQ7	Staphylococcus_phage	99.6	1.2e-136
SQE36375.1|1589254_1590493_-|portal	portal protein	portal	A0A2I6PER5	Staphylococcus_phage	100.0	6.9e-235
SQE36376.1|1590497_1592189_-|terminase	terminase large subunit	terminase	Q4ZD20	Staphylococcus_virus	100.0	0.0e+00
SQE36377.1|1592178_1592484_-|terminase	Phage terminase small subunit	terminase	A0A2I6PEQ6	Staphylococcus_phage	100.0	2.9e-49
SQE36378.1|1592610_1592925_-	HNH endonuclease family protein	NA	A0A2I6PEN4	Staphylococcus_phage	100.0	5.0e-57
SQE36379.1|1593081_1593519_-	phage regulatory protein	NA	A0A2I6PEN3	Staphylococcus_phage	100.0	7.9e-77
SQE36380.1|1593531_1594890_-	putative DNA helicase	NA	A0A1X9IH01	Staphylococcus_phage	100.0	1.6e-261
SQE36381.1|1594879_1595170_-	VRR-NUC domain-containing protein	NA	A0A2I6PEN7	Staphylococcus_phage	100.0	6.5e-51
SQE36382.1|1595510_1597958_-	E family protein	NA	A0A2I6PEP4	Staphylococcus_phage	99.8	0.0e+00
SQE36383.1|1598012_1598219_+	Uncharacterised protein	NA	A0A1X9IGZ9	Staphylococcus_phage	100.0	7.6e-30
SQE36384.1|1598513_1598666_-	transcriptional activator rinB-like protein	NA	A0A2I6PEM5	Staphylococcus_phage	100.0	2.0e-19
SQE36385.1|1598662_1599052_-	phage membrane protein	NA	A7TWI1	Staphylococcus_phage	100.0	3.6e-65
SQE36386.1|1599041_1599278_-	phage protein	NA	A7TWB3	Staphylococcus_phage	93.6	7.6e-34
SQE36387.1|1599302_1599539_-	phage protein	NA	C8CH06	Staphylococcus_phage	92.3	1.9e-32
SQE36388.1|1599535_1599778_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36389.1|1599814_1600351_-	dUTPase family protein	NA	A0A1P8L6E0	Staphylococcus_phage	100.0	2.1e-95
SQE36390.1|1600343_1600592_-	Phage protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
SQE36391.1|1600584_1600893_-	PV83 orf 27-like protein	NA	Q4ZBK6	Staphylococcus_phage	100.0	8.1e-52
SQE36392.1|1600889_1601237_-	yopX family protein	NA	D2JGL4	Staphylococcus_phage	100.0	5.9e-59
SQE36393.1|1601233_1601635_-	PVL orf 52-like protein	NA	A0A0N7E0T5	Staphylococcus_phage	97.0	2.3e-70
SQE36394.1|1601649_1601898_-	phage family protein	NA	Q4ZAR4	Staphylococcus_virus	97.6	1.2e-40
SQE36395.1|1601898_1602258_-	PVL ORF-50-like family	NA	A0A0E3T8L4	Staphylococcus_phage	99.2	2.9e-61
SQE36396.1|1602258_1602444_-	PV83 orf 23-like protein	NA	A0A0N9BBI1	Staphylococcus_phage	95.1	6.0e-26
SQE36397.1|1602443_1602599_-	Uncharacterised protein	NA	A0A2I6PDP0	Staphylococcus_phage	94.1	3.5e-19
SQE36398.1|1602610_1604572_-	DNA polymerase	NA	A0A2I6PE86	Staphylococcus_phage	99.7	0.0e+00
SQE36399.1|1604630_1605188_-	phage protein	NA	A0A2K9VBT2	Staphylococcus_phage	100.0	1.8e-97
SQE36400.1|1605213_1606380_-	PD-(D/E)XK nuclease superfamily protein	NA	B5WZM3	Staphylococcus_phage	100.0	8.3e-222
SQE36401.1|1606376_1606739_-	phage protein	NA	B5WZM2	Staphylococcus_phage	100.0	8.3e-56
SQE36402.1|1606753_1607077_-	phage protein	NA	A0A2I6PE70	Staphylococcus_phage	100.0	6.5e-52
SQE36403.1|1607155_1607317_-	phage protein	NA	A7TWM3	Staphylococcus_phage	100.0	8.6e-21
SQE36404.1|1607329_1607593_-	DNA-binding protein	NA	A7TWG0	Staphylococcus_phage	100.0	5.7e-46
SQE36405.1|1607617_1607833_-	phage protein	NA	A0A2I6PF01	Staphylococcus_phage	100.0	1.9e-31
SQE36406.1|1607887_1608253_+	phage protein	NA	A0A2I6PF07	Staphylococcus_phage	100.0	2.4e-63
SQE36407.1|1608221_1608467_-	phage protein	NA	A0A2I6PF15	Staphylococcus_phage	100.0	5.1e-41
SQE36408.1|1608516_1608735_-	ORF065	NA	B5WZL5	Staphylococcus_phage	100.0	7.8e-33
SQE36409.1|1608750_1609086_-	Phage antirepressor protein	NA	M1RZB2	Staphylococcus_phage	100.0	4.1e-57
SQE36410.1|1609141_1609306_-	Phage antirepressor protein	NA	B5WZL4	Staphylococcus_phage	100.0	8.4e-24
SQE36411.1|1609331_1609559_-	ORF060	NA	B5WZL3	Staphylococcus_phage	98.7	2.8e-33
SQE36412.1|1609730_1610345_+	Phage repressor	NA	B5WZL2	Staphylococcus_phage	100.0	9.0e-111
SQE36413.1|1610360_1611281_+	DNA polymerase III, alpha chain PolC-type	NA	B5WZL1	Staphylococcus_phage	100.0	2.5e-173
SQE36414.1|1611376_1611559_+	Putative cytosolic protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
SQE36415.1|1611615_1611741_+	ORF136	NA	A0A2I6PEK8	Staphylococcus_phage	97.6	7.3e-12
SQE36416.1|1611737_1612352_-	phi PVL ORF 30-like protein	NA	A0A2I6PEZ0	Staphylococcus_phage	100.0	6.7e-106
SQE36417.1|1612477_1613683_+|integrase	integrase	integrase	A0A2I6PEN0	Staphylococcus_phage	100.0	7.7e-223
SQE36418.1|1613725_1615753_-	Uncharacterised protein	NA	B5WZK7	Staphylococcus_phage	97.7	6.9e-115
SQE36419.1|1615745_1616675_-	putative lipoprotein	NA	NA	NA	NA	NA
SQE36420.1|1616919_1618671_-	ResE	NA	A0A1V0SGX0	Hokovirus	33.6	1.7e-21
1617894:1617911	attR	TGTCTCTAATATTTTTAG	NA	NA	NA	NA
SQE36421.1|1618651_1619377_-	transcriptional regulator srrA	NA	W8CYM9	Bacillus_phage	43.0	3.5e-45
>prophage 7
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1675832	1684144	2935845	tRNA	Staphylococcus_phage(16.67%)	7	NA	NA
SQE36483.1|1675832_1676618_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.3	8.0e-19
SQE36484.1|1676743_1677634_-	endonuclease IV	NA	A0A2H4UU70	Bodo_saltans_virus	33.1	2.0e-26
SQE36485.1|1677643_1678990_-	ATP-dependent RNA helicase YqfR	NA	A0A1V0SIR5	Klosneuvirus	33.7	5.3e-55
SQE36486.1|1679103_1680204_-	NIF3 protein	NA	A0A1S5V250	Saudi_moumouvirus	29.6	5.2e-08
SQE36487.1|1680206_1680884_-|tRNA	Putative tRNA-m1A22 methylase	tRNA	NA	NA	NA	NA
SQE36488.1|1681014_1682121_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	38.1	1.1e-37
SQE36489.1|1682344_1684144_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	36.0	4.6e-54
>prophage 8
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1753287	1762330	2935845	tRNA	uncultured_Mediterranean_phage(50.0%)	7	NA	NA
SQE36561.1|1753287_1753806_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	46.5	5.6e-29
SQE36562.1|1753827_1756101_-	Single-stranded-DNA-specific exonuclease recJ	NA	A7KV88	Bacillus_phage	28.8	1.2e-62
SQE36563.1|1756303_1758583_-	Protein-export membrane protein secD / Protein-export membrane protein secF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.8	1.8e-31
SQE36564.1|1758857_1759118_-	Preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	35.3	8.2e-05
SQE36565.1|1759136_1760276_-|tRNA	queuine tRNA-ribosyltransferase	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.7	5.4e-85
SQE36566.1|1760298_1761324_-|tRNA	S-adenosylmethionine--tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
SQE36567.1|1761325_1762330_-	Holliday junction DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.7e-05
>prophage 9
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1770959	1833289	2935845	tRNA,protease,transposase	Streptococcus_phage(46.15%)	55	NA	NA
SQE36580.1|1770959_1771232_-	Antitoxin epsilon	NA	A0A1X9I6E5	Streptococcus_phage	96.7	5.4e-07
SQE36581.1|1771249_1771459_-	Omega Transcriptional Repressor	NA	A0A1X9I6D5	Streptococcus_phage	98.6	1.4e-31
SQE36582.1|1771557_1772454_-	putative plasmid replication-associated protein	NA	A0A1X9I765	Streptococcus_phage	96.8	1.2e-151
SQE36583.1|1772686_1774291_+|transposase	transposase IS4 family protein	transposase	A0ZS58	Staphylococcus_virus	44.4	1.5e-128
SQE36584.1|1775011_1775671_-	5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A1B0RXM8	Streptococcus_phage	100.0	3.1e-125
SQE36585.1|1775781_1776138_-	Uncharacterised protein	NA	A0A1B0RXM3	Streptococcus_phage	99.2	4.2e-60
SQE36586.1|1776161_1776734_-	deoR-like helix-turn-helix domain protein	NA	A0A1B0RXM1	Streptococcus_phage	99.5	5.5e-102
SQE36587.1|1777009_1777804_-	aminoglycoside 3'-phosphotransferase	NA	E4ZFP6	Streptococcus_phage	100.0	2.3e-154
SQE36588.1|1777896_1778439_-	streptothricin acetyltransferase	NA	A0A1B0RXL7	Streptococcus_phage	100.0	8.9e-94
SQE36589.1|1778435_1779344_-	aminoglycoside 6-adenylyltransferase	NA	E4ZFP8	Streptococcus_phage	100.0	2.8e-177
SQE36590.1|1779376_1780111_-	putative methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	100.0	1.5e-141
SQE36591.1|1780091_1780961_-	putative nucleotidyltransferase	NA	A0A1X9I6C9	Streptococcus_phage	95.8	4.3e-159
SQE36592.1|1781063_1781309_-	Domain of uncharacterised function (DUF1413)	NA	NA	NA	NA	NA
SQE36593.1|1781435_1783040_-|transposase	transposase IS4 family protein	transposase	A0ZS58	Staphylococcus_virus	44.4	1.5e-128
SQE36594.1|1783560_1784292_+	rRNA adenine N-6-methyltransferase	NA	E4ZFQ0	Streptococcus_phage	47.5	1.9e-51
SQE36595.1|1784417_1785200_-	Spectinomycin 9-O-adenylyltransferase	NA	NA	NA	NA	NA
SQE36596.1|1785350_1785728_-	Transposase for transposon Tn554	NA	NA	NA	NA	NA
SQE36597.1|1785734_1787627_-	Transposase B from transposon Tn554	NA	NA	NA	NA	NA
SQE36598.1|1787623_1788709_-	Transposase A from transposon Tn554	NA	A0A0A8WIF9	Clostridium_phage	28.3	4.5e-12
SQE36599.1|1788827_1789382_-	Putative DNA repair protein, RadC	NA	NA	NA	NA	NA
SQE36600.1|1789378_1790086_-|protease	Late competence protein ComC, processing protease	protease	NA	NA	NA	NA
SQE36601.1|1790355_1791627_-	Dihydrofolate synthase / Folylpolyglutamate synthase	NA	NA	NA	NA	NA
SQE36602.1|1791639_1794270_-|tRNA	Valyl-tRNA synthetase	tRNA	A0A1V0S951	Catovirus	40.7	3.7e-153
SQE36603.1|1794672_1795233_+	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
SQE36604.1|1795455_1796523_-	Abrb	NA	NA	NA	NA	NA
SQE36605.1|1796724_1798011_-	Glutamate-1-semialdehyde aminotransferase	NA	NA	NA	NA	NA
SQE36606.1|1798058_1799033_-	Porphobilinogen synthase	NA	NA	NA	NA	NA
SQE36607.1|1799035_1799704_-	uroporphyrinogen III synthase	NA	NA	NA	NA	NA
SQE36608.1|1799725_1800652_-	porphobilinogen deaminase	NA	NA	NA	NA	NA
SQE36609.1|1800693_1801509_-|tRNA	HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase hemA	tRNA	NA	NA	NA	NA
SQE36610.1|1801530_1802877_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
SQE36611.1|1803093_1803684_-	GTP-binding protein EngB	NA	NA	NA	NA	NA
SQE36612.1|1803837_1805100_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	62.0	5.0e-140
SQE36613.1|1805250_1806552_-	trigger factor (prolyl isomerase)	NA	NA	NA	NA	NA
SQE36614.1|1806714_1807644_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36615.1|1807662_1808271_-	NUDIX hydrolase	NA	A0A060AB76	Staphylococcus_phage	35.9	6.6e-21
SQE36616.1|1808412_1808769_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
SQE36617.1|1808815_1809016_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
SQE36618.1|1809800_1811294_-	Lysine-specific permease	NA	NA	NA	NA	NA
SQE36619.1|1811719_1813657_-|tRNA	Threonyl-tRNA synthetase	tRNA	A0A2K9L6B6	Tupanvirus	36.0	1.0e-115
SQE36620.1|1814069_1814990_-	DnaI	NA	S5MU12	Brevibacillus_phage	29.4	8.1e-31
SQE36621.1|1814989_1816390_-	Helicase loader DnaB	NA	NA	NA	NA	NA
SQE36622.1|1816390_1816861_-	NrdR family transcriptional regulator	NA	NA	NA	NA	NA
SQE36623.1|1817070_1818096_-	glyceraldehyde 3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SQE36624.1|1818265_1818889_-	Dephospho-CoA kinase	NA	NA	NA	NA	NA
SQE36625.1|1818904_1819777_-	Formamidopyrimidine-DNA glycosylase	NA	G3MA33	Bacillus_virus	39.1	2.0e-42
SQE36626.1|1819792_1822423_-	DNA polymerase I	NA	A8E2B3	Enterococcus_phage	33.0	6.1e-47
SQE36627.1|1822716_1824204_-	glucosyltransferase	NA	NA	NA	NA	NA
SQE36628.1|1824702_1826367_-	Phosphate regulon sensor protein PhoR	NA	W8CYF6	Bacillus_phage	39.4	5.8e-35
SQE36629.1|1826363_1827068_-	Alkaline phosphatase synthesis transcriptional regulatory protein	NA	Q6XM27	Feldmannia_irregularis_virus	28.7	1.6e-07
SQE36630.1|1827457_1828726_-	isocitrate dehydrogenase	NA	NA	NA	NA	NA
SQE36631.1|1828774_1829896_-	Citrate synthase (si)	NA	NA	NA	NA	NA
SQE36632.1|1830243_1831605_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
SQE36633.1|1831637_1832444_-|transposase	putative transposase	transposase	A0ZS58	Staphylococcus_virus	95.5	3.2e-148
SQE36634.1|1832461_1833289_-|transposase	transposase for IS1272	transposase	A0ZS58	Staphylococcus_virus	97.4	2.1e-123
>prophage 10
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	1907386	2031650	2935845	bacteriocin,tRNA,transposase,protease	Staphylococcus_phage(86.67%)	113	NA	NA
SQE36692.1|1907386_1913947_-	LPXTG-motif cell wall anchor domain-containing protein	NA	A0A2H4PQU6	Staphylococcus_phage	98.1	2.0e-304
SQE36693.1|1914272_1914584_-	Rhodanese-like domain protein	NA	A0A2H4PQR9	Staphylococcus_phage	100.0	1.6e-52
SQE36694.1|1914605_1917023_-|tRNA	Leucyl-tRNA synthetase	tRNA	A0A2H4PQS0	Staphylococcus_phage	99.2	0.0e+00
SQE36695.1|1917318_1918491_-	Multidrug resistance protein	NA	A0A2H4PQR6	Staphylococcus_phage	100.0	3.1e-216
SQE36696.1|1918600_1919554_+	Fe-S oxidoreductase	NA	A0A2H4PQV5	Staphylococcus_phage	100.0	2.2e-79
SQE36697.1|1919550_1920114_+	SAM-dependent methyltransferase, MraW methylase family	NA	A0A2H4PQV0	Staphylococcus_phage	99.5	8.3e-103
SQE36698.1|1920233_1920635_-	HTH-type transcriptional regulator rot	NA	NA	NA	NA	NA
SQE36699.1|1921154_1921379_-	Mobile element protein	NA	Q9MBP7	Staphylococcus_prophage	81.8	4.5e-20
SQE36700.1|1921375_1921867_-	Transposase	NA	A0A146ICT8	Staphylococcus_phage	91.6	2.4e-74
SQE36701.1|1922213_1923041_-	Lysophospholipase; Monoglyceride lipase; putative	NA	NA	NA	NA	NA
SQE36702.1|1923274_1924276_+	Proline dehydrogenase (Proline oxidase)	NA	A0A2H4PQT6	Staphylococcus_phage	99.7	9.0e-185
SQE36703.1|1924397_1924862_-	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	99.4	5.8e-70
SQE36704.1|1924874_1926056_-	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	99.7	6.6e-227
SQE36705.1|1926066_1926699_-	Riboflavin synthase alpha chain	NA	A0A2H4PQS5	Staphylococcus_phage	99.5	1.7e-112
SQE36706.1|1926705_1927749_-	5-amino-6-(5-phosphoribosylamino)uracil reductase	NA	A0A2H4PQS8	Staphylococcus_phage	99.4	6.3e-197
SQE36707.1|1928229_1929732_-	pyridine nucleotide-disulfide oxidoreductase family protein	NA	A0A2H4PQX2	Staphylococcus_phage	100.0	2.3e-30
SQE36708.1|1930254_1930569_+	arsenical resistance operon repressor 2	NA	A0A2H4PQT4	Staphylococcus_phage	100.0	2.0e-53
SQE36709.1|1930568_1931861_+	arsenical pump membrane protein	NA	A0A2H4PQU3	Staphylococcus_phage	99.5	5.0e-228
SQE36710.1|1931878_1932274_+	arsenate reductase, putative	NA	A0A2H4PQT9	Staphylococcus_phage	100.0	6.3e-73
SQE36711.1|1932568_1933423_-	peptidoglycan endo-beta-N-acetylglucosaminidase	NA	Q4ZCC7	Staphylococcus_virus	38.6	9.8e-39
SQE36712.1|1933698_1933923_-	putative staphylococcal protein	NA	NA	NA	NA	NA
SQE36713.1|1934121_1934592_+	RNA polymerase sigma factor sigS	NA	A0A2H4PQT5	Staphylococcus_phage	99.4	1.0e-82
SQE36714.1|1934704_1935148_+	comK family protein	NA	NA	NA	NA	NA
SQE36715.1|1935134_1935578_-	putative staphylococcal protein	NA	A0A2H4PQT8	Staphylococcus_phage	85.0	3.0e-55
SQE36716.1|1935873_1936509_+|protease	CAAX amino terminal protease	protease	NA	NA	NA	NA
SQE36717.1|1936948_1937662_-	Transaldolase	NA	M1PR54	Cyanophage	35.3	5.5e-19
SQE36718.1|1937921_1938224_+	membrane protein	NA	NA	NA	NA	NA
SQE36719.1|1938479_1938845_+	CrcB family protein	NA	A0A2H4PQR0	Staphylococcus_phage	100.0	3.6e-59
SQE36720.1|1938841_1939195_+	CrcB family protein	NA	A0A2H4PQQ7	Staphylococcus_phage	99.1	1.0e-21
SQE36721.1|1939749_1940574_+|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	98.2	1.7e-125
SQE36722.1|1940606_1941215_+|transposase	putative transposase	transposase	A0ZS58	Staphylococcus_virus	96.0	1.3e-109
SQE36723.1|1941277_1942111_-	aldo/keto reductase family protein	NA	A0A2H4PQR8	Staphylococcus_phage	98.6	9.6e-156
SQE36724.1|1942322_1943231_-	Uncharacterised protein	NA	A0A2H4PQQ8	Staphylococcus_phage	98.7	3.2e-136
SQE36725.1|1943355_1944549_-	S-adenosylmethionine synthase	NA	A0A2H4PQS6	Staphylococcus_phage	99.2	1.1e-216
SQE36726.1|1944919_1946512_+	phosphoenolpyruvate carboxykinase	NA	A0A2H4PQN1	Staphylococcus_phage	100.0	0.0e+00
SQE36727.1|1946647_1947133_-|transposase	IS605/IS200-like transposase	transposase	A0A1P8BMC0	Lactococcus_phage	35.4	4.9e-19
SQE36728.1|1947507_1948278_-	Dipeptidyl aminopeptidase/acylaminoacyl-peptidase	NA	A0A2H4PQM6	Staphylococcus_phage	98.4	7.3e-142
SQE36729.1|1948258_1948738_-	phosphohydrolase	NA	A0A2H4PQM4	Staphylococcus_phage	98.7	1.5e-84
SQE36730.1|1948797_1949055_+	Putative cytosolic protein	NA	A0A2H4PQM5	Staphylococcus_phage	100.0	7.2e-46
SQE36731.1|1949051_1950053_-	O-succinylbenzoate synthase	NA	A0A2H4PQM0	Staphylococcus_phage	97.6	4.8e-186
SQE36732.1|1950057_1951536_-	O-succinylbenzoic acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	97.0	2.0e-281
SQE36733.1|1951694_1952177_-	putative lipoprotein	NA	A0A2H4PQN7	Staphylococcus_phage	98.6	2.5e-79
SQE36734.1|1952489_1953104_+	endonuclease	NA	A0A2H4PQM8	Staphylococcus_phage	87.3	9.5e-36
SQE36735.1|1953184_1954180_+	Telomeric repeat-binding factor 2	NA	A0A2H4PQN2	Staphylococcus_phage	96.4	7.1e-73
SQE36736.1|1954255_1954882_+	lipoprotein	NA	A0A2H4PQM7	Staphylococcus_phage	82.7	7.1e-79
SQE36737.1|1954922_1955267_+	Uncharacterised protein	NA	A0A2H4PQN6	Staphylococcus_phage	92.0	6.3e-53
SQE36738.1|1955364_1955916_+	Uncharacterised protein	NA	A0A2H4PQN4	Staphylococcus_phage	94.1	1.0e-20
SQE36739.1|1956133_1956775_-	Domain of uncharacterised function (DUF955)	NA	A0A2H4PQN8	Staphylococcus_phage	93.2	2.6e-76
SQE36740.1|1957075_1957252_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36741.1|1957262_1957646_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36742.1|1958249_1958393_-|transposase	transposase family protein, putative	transposase	A0A2H4PQU1	Staphylococcus_phage	100.0	6.4e-20
SQE36743.1|1959262_1959640_-	exported protein	NA	NA	NA	NA	NA
SQE36744.1|1960419_1962024_-|transposase	transposase IS4 family protein	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
SQE36745.1|1962174_1963335_-	[Genomic island nu Sa beta2]	NA	A0A2H4PQT3	Staphylococcus_phage	99.7	2.8e-230
SQE36746.1|1963379_1964552_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	99.6	7.7e-135
SQE36747.1|1964637_1966839_-	[Genomic island nu Sa beta2]	NA	A0A2H4PQV1	Staphylococcus_phage	100.0	5.9e-229
SQE36748.1|1966857_1968030_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36749.1|1968000_1968339_-	[Genomic island nu Sa beta2]	NA	NA	NA	NA	NA
SQE36750.1|1968445_1969618_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36751.1|1969695_1970112_-	[Genomic island nu Sa beta2]	NA	NA	NA	NA	NA
SQE36752.1|1970961_1972161_-	type I restriction-modification enzyme, S subunit, EcoA family protein	NA	A0A2H4PQP5	Staphylococcus_phage	99.7	5.5e-229
SQE36753.1|1972153_1973710_-	Type I restriction enzyme EcoprrI M protein	NA	A0A2H4PQP4	Staphylococcus_phage	99.4	2.3e-288
SQE36754.1|1974072_1974792_-|protease	Serine protease splD	protease	A0A2H4PQP1	Staphylococcus_phage	100.0	1.1e-131
SQE36755.1|1974942_1975659_-|protease	serine protease SplE	protease	A0A2H4PQN5	Staphylococcus_phage	100.0	1.1e-131
SQE36756.1|1975816_1976536_-|protease	Serine protease splD	protease	A0A2H4PQP9	Staphylococcus_phage	99.6	4.6e-130
SQE36757.1|1976656_1977376_-|protease	Serine protease splC	protease	A0A2H4PQP7	Staphylococcus_phage	99.2	1.2e-130
SQE36758.1|1977433_1978156_-|protease	Serine protease splB	protease	A0A2H4PQN0	Staphylococcus_phage	99.6	2.4e-131
SQE36759.1|1978280_1978988_-|protease	serine protease SplA	protease	A0A2H4PQN3	Staphylococcus_phage	100.0	2.6e-130
SQE36760.1|1979952_1980519_+	probable beta-lactamase	NA	A0A2H4PQH6	Staphylococcus_phage	99.5	1.2e-98
SQE36761.1|1980992_1981691_-	lantibiotic ABC transporter protein	NA	A0A2H4PQH0	Staphylococcus_phage	94.4	3.8e-113
SQE36762.1|1981687_1982449_-	lantibiotic protection ABC transporter permease subunit, MutE/EpiE family protein	NA	A0A2H4PQH2	Staphylococcus_phage	100.0	4.4e-131
SQE36763.1|1982445_1983138_-	lantibiotic immunity protein F	NA	A0A2H4PQG7	Staphylococcus_phage	100.0	6.2e-124
SQE36764.1|1983160_1984534_-|protease	epidermin leader peptide processing serine protease EpiP	protease	A0A2H4PQH1	Staphylococcus_phage	100.0	2.9e-258
SQE36765.1|1984543_1985062_-	lantibiotic modifying enzyme	NA	A0A2H4PQG9	Staphylococcus_phage	100.0	2.0e-95
SQE36766.1|1985077_1986322_-	lanthionine synthetase C-like family protein	NA	A0A2H4PQH9	Staphylococcus_phage	99.8	1.1e-237
SQE36767.1|1986314_1989308_-|bacteriocin	thiopeptide-type bacteriocin biosynthesis domain protein	bacteriocin	A0A2H4PQG8	Staphylococcus_phage	97.3	0.0e+00
SQE36768.1|1989372_1989516_-	lantibiotic gallidermin	NA	A0A2H4PQH4	Staphylococcus_phage	80.9	5.3e-14
SQE36769.1|1989716_1990889_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36770.1|1991969_1992131_-	Leukotoxin LukD	NA	A0A2H4PQH7	Staphylococcus_phage	96.2	7.5e-25
SQE36771.1|1992145_1992952_-	Leukotoxin LukD	NA	A0A2H4PQH7	Staphylococcus_phage	98.5	1.3e-146
SQE36772.1|1992953_1993889_-	Leukocidin S subunit lukE	NA	A0A2H4PQI5	Staphylococcus_phage	100.0	1.4e-174
SQE36773.1|1994772_1995228_+	[Genomic island nu Sa beta2]	NA	Q4ZCB9	Staphylococcus_virus	76.8	1.7e-61
SQE36774.1|1995240_1996029_+	Domain of uncharacterised function DUF1828	NA	A0A2H4PQI0	Staphylococcus_phage	95.8	5.3e-140
SQE36775.1|1998485_1999040_-	Putative hydrolase ydeN	NA	NA	NA	NA	NA
SQE36776.1|1999362_2000763_-	Protoporphyrinogen IX oxidase, aerobic	NA	NA	NA	NA	NA
SQE36777.1|2000786_2001710_-	Ferrochelatase, protoheme ferro-lyase	NA	NA	NA	NA	NA
SQE36778.1|2001767_2002805_-	Uroporphyrinogen III decarboxylase	NA	NA	NA	NA	NA
SQE36779.1|2003067_2003571_+	signal transduction protein TRAP	NA	NA	NA	NA	NA
SQE36780.1|2003694_2004918_-	EcsB	NA	NA	NA	NA	NA
SQE36781.1|2004910_2005651_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	29.8	1.2e-24
SQE36782.1|2005784_2006207_+	adenosine 5'-monophosphoramidase	NA	NA	NA	NA	NA
SQE36783.1|2006348_2006714_+	gas vesicle protein-protein	NA	NA	NA	NA	NA
SQE36784.1|2007446_2008004_+	membrane protein	NA	NA	NA	NA	NA
SQE36785.1|2008208_2009171_+	Foldase protein PrsA precursor	NA	NA	NA	NA	NA
SQE36786.1|2009291_2010233_-	CMP-binding-factor 1	NA	NA	NA	NA	NA
SQE36787.1|2010229_2013166_-	membrane associated protein	NA	NA	NA	NA	NA
SQE36788.1|2013155_2014352_-	DNA repair exonuclease family protein YhaO	NA	NA	NA	NA	NA
SQE36789.1|2015123_2015468_-	putative transcriptional regulator	NA	A0A1X9I5Y8	Streptococcus_phage	29.7	7.5e-06
SQE36790.1|2015536_2016661_-	membrane protein	NA	NA	NA	NA	NA
SQE36791.1|2016839_2017304_-	HTH domain protein, binds to mecA promoter region	NA	NA	NA	NA	NA
SQE36792.1|2017659_2018283_-	Two-component response regulator-like protein	NA	NA	NA	NA	NA
SQE36793.1|2018304_2019417_-	Two-component sensor protein	NA	NA	NA	NA	NA
SQE36794.1|2019579_2020401_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA	NA
SQE36795.1|2020863_2022249_-	Fumarate hydratase class II	NA	NA	NA	NA	NA
SQE36796.1|2022444_2022840_-	membrane protein	NA	NA	NA	NA	NA
SQE36797.1|2023616_2023769_-	putative staphylococcal protein	NA	NA	NA	NA	NA
SQE36798.1|2023793_2024393_-	glucosamine-6-phosphate deaminase	NA	NA	NA	NA	NA
SQE36799.1|2024551_2025022_-|tRNA	tRNA (cytosine34-2-O-)-methyltransferase	tRNA	NA	NA	NA	NA
SQE36800.1|2025026_2026154_-	iron-sulfur cluster-binding protein	NA	NA	NA	NA	NA
SQE36801.1|2026304_2027033_-	Glutamine transport ATP-binding protein glnQ	NA	G9BWD6	Planktothrix_phage	42.7	1.0e-36
SQE36802.1|2027019_2028477_-	extracellular glutamine-binding protein	NA	NA	NA	NA	NA
SQE36803.1|2028734_2029796_-	Regulatory protein	NA	NA	NA	NA	NA
SQE36804.1|2030288_2031650_+|transposase	IS1181 transposase	transposase	NA	NA	NA	NA
>prophage 11
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	2077590	2171885	2935845	tail,holin,transposase,protease,head,tRNA,portal,terminase,capsid	Staphylococcus_phage(88.64%)	120	NA	NA
SQE36843.1|2077590_2079018_-|tRNA	aspartyl/glutamyl-tRNA amidotransferase subunit B	tRNA	NA	NA	NA	NA
SQE36844.1|2079030_2080488_-|tRNA	aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A	tRNA	NA	NA	NA	NA
SQE36845.1|2080489_2080792_-|tRNA	Aspartyl-tRNA(Asn) amidotransferase subunit C; Glutamyl-tRNA(Gln) amidotransferase subunit C	tRNA	NA	NA	NA	NA
SQE36846.1|2081158_2082697_+	Sodium/proline symporter	NA	NA	NA	NA	NA
SQE36847.1|2082785_2083985_-	Lipoprotein (pheromone precursor)	NA	NA	NA	NA	NA
SQE36848.1|2083997_2086001_-	DNA ligase	NA	A0A0K2QQN8	Ralstonia_phage	36.1	5.8e-114
SQE36849.1|2086004_2088197_-	ATP-dependent DNA helicase UvrD/PcrA	NA	A7KV33	Bacillus_phage	42.2	1.0e-135
SQE36850.1|2088193_2088529_-	geranylgeranylglyceryl diphosphate synthase	NA	NA	NA	NA	NA
SQE36851.1|2088591_2088891_-	geranylgeranylglyceryl diphosphate synthase	NA	NA	NA	NA	NA
SQE36852.1|2089062_2089365_-	His repressor	NA	NA	NA	NA	NA
SQE36853.1|2089473_2090769_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	32.9	1.6e-16
SQE36854.1|2091629_2092796_+	Staphopain A precursor	NA	NA	NA	NA	NA
SQE36855.1|2092826_2093153_+|protease	putative cysteine protease inhibitor (Staphostatin A)	protease	NA	NA	NA	NA
SQE36856.1|2093444_2093618_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE36857.1|2093598_2094201_-	Uncharacterized protein conserved in bacteria (DUF2179)	NA	NA	NA	NA	NA
SQE36858.1|2094471_2095293_-	NH(3)-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	52.7	1.8e-69
SQE36859.1|2095285_2096755_-	nicotinate phosphoribosyltransferase	NA	G3MA18	Bacillus_virus	45.1	4.5e-108
SQE36860.1|2096938_2098015_+	nitric-oxide synthase	NA	NA	NA	NA	NA
SQE36861.1|2098034_2098592_+	ACT domain protein	NA	NA	NA	NA	NA
SQE36862.1|2098591_2098828_+	ACT domain protein	NA	NA	NA	NA	NA
SQE36863.1|2099017_2100580_-	sodium-dependent dicarboxylate transporter sdcS	NA	NA	NA	NA	NA
SQE36864.1|2100784_2101882_-	cell wall surface anchor family protein	NA	U5PWM6	Bacillus_phage	34.6	1.9e-47
SQE36865.1|2102253_2102814_+	Nicotinamidase	NA	G3MA16	Bacillus_virus	41.2	2.0e-32
SQE36866.1|2102866_2103796_+	inorganic pyrophosphatase	NA	NA	NA	NA	NA
SQE36867.1|2104215_2105595_+	Aldehyde dehydrogenase	NA	NA	NA	NA	NA
SQE36868.1|2105714_2106743_-	6-phosphogluconolactonase	NA	NA	NA	NA	NA
SQE36869.1|2107012_2107414_+	yolD-like family protein	NA	U3PG23	Staphylococcus_phage	42.9	6.0e-23
SQE36870.1|2107986_2108160_-	exported protein	NA	NA	NA	NA	NA
SQE36871.1|2108538_2109651_+	choloylglycine hydrolase	NA	NA	NA	NA	NA
SQE36872.1|2109707_2110550_-	exported protein	NA	NA	NA	NA	NA
SQE36873.1|2110546_2111104_-	Predicted membrane protein	NA	NA	NA	NA	NA
SQE36874.1|2111163_2111688_-	membrane protein	NA	NA	NA	NA	NA
SQE36875.1|2111808_2112372_+	Thioredoxin	NA	NA	NA	NA	NA
SQE36876.1|2112437_2113178_-	ABC-2 transporter family protein	NA	NA	NA	NA	NA
SQE36877.1|2113177_2114050_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	35.2	6.1e-28
SQE36878.1|2114046_2114727_-	membrane protein	NA	NA	NA	NA	NA
SQE36879.1|2114727_2115624_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	30.2	1.1e-16
SQE36880.1|2115620_2116001_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SQE36881.1|2116264_2116441_-	membrane protein	NA	NA	NA	NA	NA
SQE36882.1|2116981_2118268_+	Aspartate aminotransferase	NA	NA	NA	NA	NA
SQE36883.1|2118591_2118948_-	truncated map-w protein; extracellular adherence protein of broad specificity Eap/Map	NA	NA	NA	NA	NA
SQE36884.1|2118966_2120139_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36885.1|2120224_2121979_-	MHC class II analog (pseudogene)	NA	NA	NA	NA	NA
SQE36886.1|2122364_2122565_+	beta-hemolysin	NA	A0A1P8L6A7	Staphylococcus_phage	100.0	3.4e-27
SQE36887.1|2123739_2124090_-	Involved in expression of fibrinogen binding protein, phage associated	NA	A0A1P8L6B0	Staphylococcus_phage	100.0	7.5e-54
SQE36888.1|2124199_2125372_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36889.1|2125932_2126229_-	amidase	NA	A0A1P8L6B4	Staphylococcus_phage	95.9	1.6e-49
SQE36890.1|2126918_2127410_-	Staphylokinase	NA	A0A1W6JQ12	Staphylococcus_phage	99.4	4.7e-86
SQE36891.1|2127600_2128356_-	Autolysin	NA	D2JLG5	Staphylococcus_phage	100.0	3.4e-152
SQE36892.1|2128367_2128622_-|holin	Phage holin	holin	D2JLG4	Staphylococcus_phage	97.6	3.4e-40
SQE36893.1|2129118_2129892_-	enterotoxin P, phage associated	NA	A0A1X9H080	Staphylococcus_phage	100.0	1.1e-145
SQE36894.1|2130264_2130639_-	phage protein	NA	G4KNR3	Staphylococcus_phage	99.2	7.3e-39
SQE36895.1|2130694_2130982_-	phi PVL ORF 22-like protein	NA	A0A1X9H0N7	Staphylococcus_phage	100.0	7.6e-44
SQE36896.1|2131027_2131180_-	phage protein	NA	A0A1W6JPL6	Staphylococcus_phage	100.0	7.6e-19
SQE36897.1|2131172_2134955_-	phage minor structural, N-terminal region domain protein	NA	A0A1X9H096	Staphylococcus_phage	99.3	0.0e+00
SQE36898.1|2134970_2136461_-|tail	phage tail family protein	tail	R9QST9	Staphylococcus_phage	100.0	3.1e-298
SQE36899.1|2136460_2141110_-|tail	phage tail tape measure protein, TP901 family, core region	tail	A0A1V0E5H1	Staphylococcus_phage	94.3	0.0e+00
SQE36900.1|2141347_2141794_-	Bacteriophage	NA	O80053	Staphylococcus_phage	92.6	1.3e-69
SQE36901.1|2141860_2142814_-|tail	phage major tail, phi13 family protein	tail	A7TWD0	Staphylococcus_phage	95.0	4.0e-166
SQE36902.1|2142814_2143195_-	Bacteriophage	NA	Q9MBP5	Staphylococcus_prophage	85.7	2.9e-59
SQE36903.1|2143191_2143569_-	gp10 family phage protein	NA	D2JLF2	Staphylococcus_phage	98.4	3.4e-60
SQE36904.1|2143568_2143904_-|head,tail	phage head-tail adaptor	head,tail	A7TWC7	Staphylococcus_phage	100.0	1.1e-59
SQE36905.1|2143890_2144223_-|head,tail	phage gp6-like head-tail connector family protein	head,tail	D2JLF0	Staphylococcus_phage	100.0	2.1e-58
SQE36906.1|2144231_2144390_-	Bacteriophage	NA	D2JLE9	Staphylococcus_phage	100.0	3.2e-20
SQE36907.1|2144425_2145673_-|capsid	phage major capsid protein, HK97 family	capsid	A7TWC4	Staphylococcus_phage	100.0	5.0e-209
SQE36908.1|2145760_2146345_-|head,protease	prohead protease	head,protease	D2JLE7	Staphylococcus_phage	100.0	9.8e-107
SQE36909.1|2146337_2147588_-|portal	portal protein	portal	D2JLE6	Staphylococcus_phage	100.0	4.4e-237
SQE36910.1|2147593_2147833_-	phi PVL orf 3-like protein	NA	A7TWC1	Staphylococcus_phage	98.7	1.2e-34
SQE36911.1|2147807_2149502_-	phage Terminase family protein	NA	D2JLE4	Staphylococcus_phage	100.0	0.0e+00
SQE36912.1|2149504_2149972_-|terminase	phage terminase small subunit	terminase	D2JLE3	Staphylococcus_phage	100.0	1.1e-81
SQE36913.1|2150100_2150454_-	phage endonuclease	NA	D2JLE2	Staphylococcus_phage	100.0	1.3e-66
SQE36914.1|2150460_2150913_-	hypothetical phage-related protein	NA	D2JLE1	Staphylococcus_phage	100.0	1.4e-79
SQE36915.1|2151027_2151498_-	Phage protein	NA	D2JLE0	Staphylococcus_phage	99.3	1.7e-69
SQE36916.1|2151520_2151721_-	phage protein	NA	A0A2I6PDV9	Staphylococcus_phage	98.5	4.0e-28
SQE36917.1|2151720_2151870_-	transcriptional activator RinB	NA	A0A1W6JPZ2	Staphylococcus_phage	100.0	4.8e-18
SQE36918.1|2151869_2152256_-	phage membrane protein	NA	Q4ZBK1	Staphylococcus_phage	98.4	1.5e-63
SQE36919.1|2152245_2152515_-	phage protein	NA	A0A2I6PEM4	Staphylococcus_phage	92.1	5.3e-39
SQE36920.1|2152474_2152678_-	Uncharacterised protein	NA	A0A2I6PEQ8	Staphylococcus_phage	97.0	8.3e-29
SQE36921.1|2152674_2152881_-	Protein of uncharacterised function (DUF1381)	NA	B7T0C2	Staphylococcus_virus	98.5	4.2e-20
SQE36922.1|2152917_2153454_-	dUTPase family protein	NA	R4IG63	Staphylococcus_phage	100.0	9.4e-96
SQE36923.1|2153446_2153695_-	Phage protein	NA	A0A2K9VBU0	Staphylococcus_phage	100.0	3.1e-38
SQE36924.1|2153687_2153972_-	phage protein	NA	E9LT36	Staphylococcus_phage	98.9	1.0e-45
SQE36925.1|2153968_2154418_-	YopX-family protein	NA	A0A2I6PDH2	Staphylococcus_phage	99.3	3.5e-80
SQE36926.1|2154414_2154609_-	phage protein	NA	A0A0E3XCV8	Staphylococcus_phage	100.0	2.5e-27
SQE36927.1|2154605_2155010_-	putative phage PVL protein	NA	A0A0E3T8H9	Staphylococcus_phage	100.0	4.2e-72
SQE36928.1|2155012_2155222_-	Phage protein	NA	A0A2K9VBT9	Staphylococcus_phage	98.5	8.8e-34
SQE36929.1|2155232_2155475_-	phage family protein	NA	A0A2I6PDB4	Staphylococcus_phage	95.0	8.1e-39
SQE36930.1|2155480_2155735_-	phage protein	NA	A0A2K9VBW1	Staphylococcus_phage	97.6	1.4e-41
SQE36931.1|2155734_2156352_-	phage protein	NA	A0A059T7P3	Staphylococcus_phage	99.0	2.8e-83
SQE36932.1|2156352_2156538_-	Protein of uncharacterised function (DUF3113)	NA	A0A1X9H053	Staphylococcus_phage	96.7	1.2e-26
SQE36933.1|2156542_2156947_-	putative phi ETA-like protein	NA	G4KNP2	Staphylococcus_phage	99.3	2.1e-68
SQE36934.1|2156957_2157179_-	putative phi ETA-like protein	NA	Q9G021	Staphylococcus_phage	97.3	3.2e-34
SQE36935.1|2157191_2157350_-	Uncharacterised protein	NA	A0A0H3U301	Staphylococcus_phage	98.1	4.5e-22
SQE36936.1|2157346_2158132_-	ORF017	NA	A0A0H4J332	Staphylococcus_phage	100.0	1.9e-145
SQE36937.1|2158144_2158876_-	Uncharacterised protein	NA	A0A1J0MGB2	Staphylococcus_phage	79.3	1.2e-80
SQE36938.1|2158940_2159222_+	Uncharacterised protein	NA	A0A1W6JPU7	Staphylococcus_phage	100.0	2.6e-49
SQE36939.1|2159214_2159364_-	Uncharacterised protein	NA	A7TWN0	Staphylococcus_phage	100.0	2.4e-17
SQE36940.1|2159360_2160032_-	phi PV83 orf 19-like protein	NA	A7TWM9	Staphylococcus_phage	98.7	4.9e-126
SQE36941.1|2160044_2160599_-	Single stranded DNA-binding protein,phage-associated	NA	A7TWM8	Staphylococcus_phage	100.0	1.0e-100
SQE36942.1|2160628_2161408_-	Uncharacterised protein	NA	Q9G028	Staphylococcus_virus	99.6	7.4e-142
SQE36943.1|2161400_2161622_-	phage protein	NA	A0A2H4PQR5	Staphylococcus_phage	100.0	4.2e-34
SQE36944.1|2161631_2161892_-	putative phi PVL-like protein	NA	A0A2H4PQR7	Staphylococcus_phage	100.0	3.4e-43
SQE36945.1|2161984_2162146_-	phage protein	NA	A0A2I6PDF7	Staphylococcus_phage	100.0	1.9e-20
SQE36946.1|2162142_2162463_-	Uncharacterized protein conserved in bacteria	NA	A0A2I6PDH6	Staphylococcus_phage	100.0	1.5e-56
SQE36947.1|2162521_2163154_+	phage protein	NA	A7TW95	Staphylococcus_phage	100.0	1.5e-113
SQE36948.1|2163168_2163309_-	phage protein	NA	A0A2I6PDG0	Staphylococcus_phage	100.0	1.9e-16
SQE36949.1|2163339_2163537_-	Phage protein	NA	A0A1W6JPV3	Staphylococcus_phage	100.0	1.2e-24
SQE36950.1|2163552_2164302_-	putative phage anti-repressor protein	NA	Q8SDM9	Staphylococcus_phage	99.6	4.4e-136
SQE36951.1|2164358_2164898_+	putative phi PVL-like protein	NA	A7TW92	Staphylococcus_phage	100.0	1.7e-97
SQE36952.1|2164921_2165182_-	putative phi PVL-like protein	NA	A7TW91	Staphylococcus_phage	100.0	2.7e-40
SQE36953.1|2165199_2165424_-	putative cro repressor	NA	A7TW90	Staphylococcus_phage	100.0	4.5e-36
SQE36954.1|2165582_2166353_+	putative phage PVL repressor protein	NA	A0A1P8L6G7	Staphylococcus_phage	100.0	6.2e-141
SQE36955.1|2166407_2166497_+	Uncharacterised protein	NA	A0A2I6PEY7	Staphylococcus_phage	100.0	2.9e-07
SQE36956.1|2166552_2166735_+	Putative cytosolic protein	NA	A0A2I6PDR4	Staphylococcus_phage	100.0	5.3e-27
SQE36957.1|2166791_2166917_+	ORF136	NA	A0A2I6PF02	Staphylococcus_phage	100.0	5.1e-13
SQE36958.1|2166913_2167528_-	phi PVL ORF 30-like protein	NA	A7TW88	Staphylococcus_phage	100.0	7.9e-107
SQE36959.1|2167635_2168673_+	DNA integration/recombination/inversion protein	NA	E9LT82	Staphylococcus_phage	93.0	1.0e-178
SQE36960.1|2168729_2169554_+	phospholipase C	NA	A0A1P8L6H7	Staphylococcus_phage	100.0	6.8e-162
SQE36961.1|2169791_2170808_-	gamma-hemolysin component B	NA	A0A2I6PER8	Staphylococcus_phage	29.0	1.1e-25
SQE36962.1|2170829_2171885_-	Leukocidin S subunit	NA	A0A1X9IGW5	Staphylococcus_phage	34.3	2.8e-35
>prophage 12
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	2181124	2218697	2935845	terminase,protease,integrase,transposase	Staphylococcus_phage(50.0%)	44	2177735:2177754	2194604:2194623
2177735:2177754	attL	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
SQE36970.1|2181124_2182297_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE36971.1|2182346_2182679_-	pathogenicity island protein	NA	NA	NA	NA	NA
SQE36972.1|2182665_2183094_-	pathogenicity island protein	NA	NA	NA	NA	NA
SQE36973.1|2183090_2183609_-	pathogenicity island protein	NA	NA	NA	NA	NA
SQE36974.1|2184037_2184607_-|terminase	putative phage terminase	terminase	A0A1W6JQF0	Staphylococcus_phage	97.9	4.6e-101
SQE36975.1|2184603_2184945_-|transposase	transposase	transposase	Q4ZE86	Staphylococcus_phage	98.2	8.4e-58
SQE36976.1|2184947_2185475_-	pathogenicity island protein	NA	Q4ZE87	Staphylococcus_phage	97.7	4.9e-89
SQE36977.1|2185527_2186181_-	Uncharacterised protein	NA	Q4ZE82	Staphylococcus_phage	99.1	8.4e-115
SQE36978.1|2186211_2186553_-	pathogenicity island protein	NA	Q4ZE66	Staphylococcus_phage	100.0	2.9e-58
SQE36979.1|2187088_2187730_-|transposase	transposase	transposase	Q4ZE67	Staphylococcus_phage	95.3	3.8e-112
SQE36980.1|2187731_2187995_-	pathogenicity island protein	NA	NA	NA	NA	NA
SQE36981.1|2187996_2188353_-	pathogenicity island protein	NA	A0A2H4JBD4	uncultured_Caudovirales_phage	78.8	3.0e-50
SQE36982.1|2188595_2189966_-	putative DNA primase-phage associated	NA	A0A2H4JBE3	uncultured_Caudovirales_phage	94.7	1.2e-256
SQE36983.1|2189977_2190847_-	putative phage primase	NA	A0A2H4JEH3	uncultured_Caudovirales_phage	75.8	2.2e-131
SQE36984.1|2190911_2191238_-	mobile element-associated protein	NA	Q4ZE75	Staphylococcus_phage	98.1	1.8e-54
SQE36985.1|2191238_2191622_-	pathogenicity island protein	NA	A0A1W6JQI7	Staphylococcus_phage	96.1	9.7e-63
SQE36986.1|2191623_2191827_-	pathogenicity island protein	NA	A0A1W6JQF4	Staphylococcus_phage	98.5	2.0e-30
SQE36987.1|2191811_2191967_-	hypothetical bovine pathogenicity island protein	NA	NA	NA	NA	NA
SQE36988.1|2191963_2192281_-	mobile element-associated transcriptional regulator, putative	NA	A0A1W6JQE0	Staphylococcus_phage	98.1	9.2e-51
SQE36989.1|2192285_2192504_-	mobile element-associated transcriptional regulator, putative	NA	A0A2H4JB11	uncultured_Caudovirales_phage	66.7	1.3e-19
SQE36990.1|2192676_2193351_+	mobile element-associated transcriptional regulator, putative	NA	A0A2H4JGT9	uncultured_Caudovirales_phage	45.8	1.6e-39
SQE36991.1|2193364_2194537_+|integrase	mobile element-associated integrase, putative	integrase	A0A1W6JQD3	Staphylococcus_phage	98.2	7.8e-220
SQE36992.1|2194605_2196222_-	heat shock protein 60 family chaperone GroEL	NA	A0A240F779	uncultured_virus	54.7	3.4e-157
2194604:2194623	attR	TTTTACATCATTCCTGGCAT	NA	NA	NA	NA
SQE36993.1|2196297_2196582_-	Heat shock protein 60 family co-chaperone GroES	NA	A0A221S386	uncultured_virus	46.2	4.7e-14
SQE36994.1|2196756_2197500_+	abortive infection protein	NA	NA	NA	NA	NA
SQE36995.1|2197524_2198784_-	membrane anchored protein	NA	NA	NA	NA	NA
SQE36996.1|2198980_2199607_+	nitroreductase family protein	NA	NA	NA	NA	NA
SQE36997.1|2199967_2200753_+	Aliphatic amidase amiE	NA	NA	NA	NA	NA
SQE36998.1|2201665_2202289_+	accessory gene regulator protein B AGRB	NA	NA	NA	NA	NA
SQE36999.1|2202285_2202426_+	Regulator protein agrD	NA	NA	NA	NA	NA
SQE37000.1|2202450_2203743_+	Regulator protein agrC	NA	NA	NA	NA	NA
SQE37001.1|2203761_2204286_+	accessory gene regulator protein A	NA	NA	NA	NA	NA
SQE37002.1|2204843_2205803_-	Fructokinase	NA	NA	NA	NA	NA
SQE37003.1|2205799_2207284_-	sucrose-6-phosphate hydrolase	NA	S6ATV4	Bacillus_phage	25.6	4.0e-19
SQE37004.1|2207432_2208383_-	Sucrose operon repressor ScrR, LacI family	NA	NA	NA	NA	NA
SQE37005.1|2208565_2209816_-	ammonium transporter family protein	NA	H8ZJB2	Ostreococcus_tauri_virus	31.2	4.5e-40
SQE37006.1|2210022_2210247_-	transcriptional regulator	NA	NA	NA	NA	NA
SQE37007.1|2210306_2211386_-	putative transport system permease protein	NA	NA	NA	NA	NA
SQE37008.1|2211689_2212325_-	Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein)	NA	NA	NA	NA	NA
SQE37009.1|2212577_2214506_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	30.4	5.4e-53
SQE37010.1|2214867_2216478_+	MutS-related protein, family 1	NA	A0A0N9R0S5	Chrysochromulina_ericina_virus	26.9	2.5e-19
SQE37011.1|2216579_2217605_-|protease	glycoprotease	protease	A0A0R6PI74	Moraxella_phage	40.9	6.9e-63
SQE37012.1|2217597_2218062_-	Ribosomal-protein-S18p-alanine acetyltransferase	NA	NA	NA	NA	NA
SQE37013.1|2218034_2218697_-|protease	Inactive protein of metal-dependent protease family, putative molecular chaperone	protease	NA	NA	NA	NA
>prophage 13
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	2322654	2393356	2935845	transposase	Staphylococcus_phage(30.77%)	51	NA	NA
SQE37110.1|2322654_2323827_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE37111.1|2324238_2325096_-	Putative cytosolic protein	NA	NA	NA	NA	NA
SQE37112.1|2325163_2325946_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.5	9.7e-09
SQE37113.1|2326177_2327983_-	glucosamine--fructose-6-phosphate aminotransferase	NA	M1H1Z3	Paramecium_bursaria_Chlorella_virus	38.6	2.0e-97
SQE37114.1|2328663_2330202_+	PTS system, mannitol specific IIBC component	NA	NA	NA	NA	NA
SQE37115.1|2330236_2332369_+	PTS system mannitol (Cryptic)-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQE37116.1|2332380_2332815_+	PTS system mannitol-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQE37117.1|2332814_2333921_+	Mannitol-1-phosphate 5-dehydrogenase	NA	NA	NA	NA	NA
SQE37118.1|2334239_2341676_-	FmtB protein	NA	A0A2H4PQU6	Staphylococcus_phage	37.6	1.2e-20
SQE37119.1|2341952_2343308_-	Phosphoglucosamine mutase / FemD, factor involved in methicillin resistance	NA	NA	NA	NA	NA
SQE37120.1|2343334_2344267_-	ybbR-like family protein	NA	NA	NA	NA	NA
SQE37121.1|2344268_2345078_-	ABC transporter, permease protein YbbP clustered with maltose/maltodextrin transporter / Tlr1762 protein	NA	NA	NA	NA	NA
SQE37122.1|2345266_2346175_-	Arginase	NA	A0A1V0SJM8	Klosneuvirus	32.0	3.2e-27
SQE37123.1|2346400_2347603_+|transposase	IS1181 transposase	transposase	NA	NA	NA	NA
SQE37124.1|2354013_2355078_-	Iron-sulfur cluster assembly/repair protein ApbC	NA	NA	NA	NA	NA
SQE37125.1|2355225_2356668_-	multidrug resistance transporter	NA	NA	NA	NA	NA
SQE37126.1|2356989_2357457_-	SmrB	NA	NA	NA	NA	NA
SQE37127.1|2357561_2358905_-	Multidrug resistance protein B	NA	NA	NA	NA	NA
SQE37128.1|2359081_2359768_-	hemolysin III-like protein	NA	NA	NA	NA	NA
SQE37129.1|2359783_2360971_-	N-acetylglucosamine-1-phosphate uridyltransferase eukaryotic	NA	NA	NA	NA	NA
SQE37130.1|2361014_2361530_-	membrane-bound metal-dependent hydrolase	NA	NA	NA	NA	NA
SQE37131.1|2361706_2361967_+	Putative cytosolic protein	NA	NA	NA	NA	NA
SQE37132.1|2362098_2363469_-	nucleoside recognition domain-containing protein	NA	NA	NA	NA	NA
SQE37133.1|2363704_2364673_-	Heme ABC type transporter HtsABC, permease protein HtsC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	28.8	1.3e-15
SQE37134.1|2364669_2365701_-	Heme ABC type transporter HtsABC, permease protein HtsB	NA	NA	NA	NA	NA
SQE37135.1|2365712_2366696_-	iron(III) dicitrate-binding protein	NA	NA	NA	NA	NA
SQE37136.1|2367087_2368158_-	alanine racemase	NA	NA	NA	NA	NA
SQE37137.1|2368164_2369922_-	Siderophore biosynthesis protein	NA	NA	NA	NA	NA
SQE37138.1|2369908_2371102_-	Macrolide-efflux protein	NA	NA	NA	NA	NA
SQE37139.1|2371203_2373180_+	Siderophore biosynthesis protein	NA	NA	NA	NA	NA
SQE37140.1|2373635_2374436_+|transposase	transposase	transposase	A0ZS58	Staphylococcus_virus	92.6	2.3e-114
SQE37141.1|2374453_2374753_+|transposase	truncated transposase for IS1272	transposase	A0A146ICT8	Staphylococcus_phage	100.0	1.0e-51
SQE37142.1|2374915_2375260_+|transposase	transposase	transposase	Q9MBP7	Staphylococcus_prophage	94.7	2.5e-54
SQE37143.1|2375295_2375805_-	alkaline shock protein 23	NA	NA	NA	NA	NA
SQE37144.1|2375867_2376107_-	small integral membrane protein-protein	NA	NA	NA	NA	NA
SQE37145.1|2376119_2376656_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE37146.1|2376830_2378393_-	Glycine betaine transporter OpuD	NA	A0A2I7QNT1	Vibrio_phage	25.0	5.4e-19
SQE37147.1|2378699_2379701_-	Bifunctional protein: zinc-containing alcohol dehydrogenase; quinone oxidoreductase (NADPH:quinone reductase)	NA	NA	NA	NA	NA
SQE37148.1|2379934_2380939_-	Quinone oxidoreductase	NA	NA	NA	NA	NA
SQE37149.1|2381218_2382088_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
SQE37150.1|2382353_2383766_-	6-phospho-beta-galactosidase	NA	A0A0B5JD41	Pandoravirus	28.9	5.0e-48
SQE37151.1|2383783_2385496_-	PTS system, lactose-specific IIBC component	NA	NA	NA	NA	NA
SQE37152.1|2385501_2385813_-	PTS system lactose-specific transporter subunit IIA	NA	NA	NA	NA	NA
SQE37153.1|2385834_2386815_-	Tagatose 1,6-diphosphate aldolase	NA	NA	NA	NA	NA
SQE37154.1|2386818_2387751_-	Tagatose-6-phosphate kinase / 1-phosphofructokinase	NA	NA	NA	NA	NA
SQE37155.1|2387763_2388279_-	Galactose-6-phosphate isomerase, LacB subunit	NA	NA	NA	NA	NA
SQE37156.1|2388294_2388723_-	Galactose-6-phosphate isomerase, LacA subunit	NA	NA	NA	NA	NA
SQE37157.1|2389090_2389846_-	lactose phosphotransferase system repressor	NA	NA	NA	NA	NA
SQE37158.1|2390087_2390828_+	SIR2 family protein	NA	A0A2I2L319	Orpheovirus	29.4	7.3e-14
SQE37159.1|2391118_2391727_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE37160.1|2392183_2393356_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
>prophage 14
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	2536292	2576711	2935845	protease,transposase	Staphylococcus_phage(50.0%)	39	NA	NA
SQE37312.1|2536292_2537465_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE37313.1|2537657_2538113_-	Teicoplanin-resistance associated HTH-type transcriptional regulator TcaR	NA	NA	NA	NA	NA
SQE37314.1|2538307_2539276_+	Integral membrane protein	NA	NA	NA	NA	NA
SQE37315.1|2539851_2540208_+|transposase	transposase (fragment)	transposase	A0A146ICT8	Staphylococcus_phage	94.2	5.5e-52
SQE37316.1|2540347_2541013_-	Heme efflux system ATPase HrtA	NA	G9BWD6	Planktothrix_phage	38.8	1.2e-36
SQE37317.1|2541012_2542068_-	Heme efflux system permease HrtB	NA	NA	NA	NA	NA
SQE37318.1|2542203_2542878_+	two-component response regulator	NA	W8CYM9	Bacillus_phage	45.2	3.6e-52
SQE37319.1|2542870_2544244_+	Sensor histidine kinase colocalized with HrtAB transporter	NA	A0A1V0SGX0	Hokovirus	29.8	1.3e-13
SQE37320.1|2544406_2544850_+	lytTr DNA-binding domain protein	NA	NA	NA	NA	NA
SQE37321.1|2544846_2545302_+	membrane protein	NA	NA	NA	NA	NA
SQE37322.1|2545367_2546846_-	Malate:quinone oxidoreductase	NA	NA	NA	NA	NA
SQE37323.1|2547226_2548825_-	L-lactate permease	NA	NA	NA	NA	NA
SQE37324.1|2549141_2550815_+	Poly(glycerophosphate) glycerophosphotransferase family protein	NA	NA	NA	NA	NA
SQE37325.1|2551039_2552212_+|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	100.0	3.5e-135
SQE37326.1|2552341_2553781_-	Bifunctional AAC/APH	NA	A0A1X9I6C2	Streptococcus_phage	100.0	3.8e-285
SQE37327.1|2553781_2554186_-	acetyltransferase GNAT family protein	NA	A0A0N7GFH7	Staphylococcus_phage	100.0	3.4e-74
SQE37328.1|2554230_2555403_-|transposase	IS256-like transposase	transposase	A0A0N9STL0	Staphylococcus_phage	99.6	7.7e-135
SQE37329.1|2555541_2556171_-	lipoprotein, putative	NA	NA	NA	NA	NA
SQE37330.1|2556484_2557000_-	Protease synthase and sporulation negative regulatory protein PAI 1	NA	NA	NA	NA	NA
SQE37331.1|2557190_2558195_+	quinone oxidoreductase	NA	NA	NA	NA	NA
SQE37332.1|2558240_2558642_-	Attachment to host cells and virulence	NA	NA	NA	NA	NA
SQE37333.1|2558677_2559712_-	Thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	26.6	5.8e-17
SQE37334.1|2559943_2560375_-	membrane protein	NA	NA	NA	NA	NA
SQE37335.1|2560581_2561859_-	Phage infection protein	NA	NA	NA	NA	NA
SQE37336.1|2562019_2562643_+	Transcriptional regulator, TetR family	NA	NA	NA	NA	NA
SQE37337.1|2562688_2563633_+	Magnesium and cobalt transport protein corA	NA	NA	NA	NA	NA
SQE37338.1|2563718_2565161_-	PTS system, sucrose-specific IIB component / PTS system, sucrose-specific IIC component	NA	NA	NA	NA	NA
SQE37339.1|2565343_2565727_+	type II DNA modification enzyme	NA	NA	NA	NA	NA
SQE37340.1|2567214_2568330_+	AraC family regulatory protein	NA	NA	NA	NA	NA
SQE37341.1|2568283_2569321_+	AraC family regulatory protein	NA	NA	NA	NA	NA
SQE37342.1|2569391_2569814_+	General stress protein 26	NA	NA	NA	NA	NA
SQE37343.1|2570078_2570435_+	exported protein	NA	NA	NA	NA	NA
SQE37344.1|2570838_2572116_-	Proton/glutamate symport protein; Sodium/glutamate symport protein	NA	NA	NA	NA	NA
SQE37345.1|2572297_2572663_-	exported protein	NA	NA	NA	NA	NA
SQE37346.1|2573060_2573507_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
SQE37347.1|2573728_2574151_+	small heat shock protein	NA	NA	NA	NA	NA
SQE37348.1|2574257_2575427_-	nitrite extrusion protein	NA	NA	NA	NA	NA
SQE37349.1|2575796_2576435_+|protease	Predicted Zn-dependent protease (DUF2268)	protease	NA	NA	NA	NA
SQE37350.1|2576504_2576711_+|protease	Zn-dependent protease-protein	protease	NA	NA	NA	NA
>prophage 15
LS483301	Staphylococcus aureus strain NCTC13394 genome assembly, chromosome: 1	2935845	2639510	2674272	2935845	holin,transposase	Bacillus_virus(25.0%)	32	NA	NA
SQE37406.1|2639510_2640206_-|holin	putative glycine betaine/carnitine/choline transport system permease protein	holin	NA	NA	NA	NA
SQE37407.1|2640205_2641147_-|holin	Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC	holin	NA	NA	NA	NA
SQE37408.1|2641163_2641799_-|holin	Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB	holin	G3M9Y4	Bacillus_virus	26.2	9.0e-05
SQE37409.1|2641795_2643022_-|holin	glycine betaine/carnitine/choline ABC transporter, ATP-binding protein, putative	holin	Q6GZ03	Mycoplasma_phage	50.5	6.6e-20
SQE37410.1|2643691_2644291_-	molecular chaperone GroEL	NA	NA	NA	NA	NA
SQE37411.1|2644470_2646108_+	Amino acid permease	NA	NA	NA	NA	NA
SQE37412.1|2646715_2648068_+	Carboxylesterase type B	NA	A0A0B5J865	Pandoravirus	34.2	2.5e-12
SQE37413.1|2648129_2649317_-	chloramphenicol resistance protein	NA	NA	NA	NA	NA
SQE37414.1|2649712_2650489_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
SQE37415.1|2650481_2651144_-	Methionine ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	32.2	6.5e-22
SQE37416.1|2651391_2652468_-	endoglucanase M	NA	NA	NA	NA	NA
SQE37417.1|2652822_2653089_-	addiction module toxin	NA	NA	NA	NA	NA
SQE37418.1|2653088_2653346_-	prevent-host-death family protein	NA	NA	NA	NA	NA
SQE37419.1|2653704_2654160_+	lipoprotein	NA	NA	NA	NA	NA
SQE37420.1|2654327_2655905_-	Ferredoxin-dependent glutamate synthase	NA	NA	NA	NA	NA
SQE37421.1|2656099_2656849_+	membrane protein	NA	NA	NA	NA	NA
SQE37422.1|2657072_2658266_-	Antibiotic resistance protein	NA	NA	NA	NA	NA
SQE37423.1|2658277_2659027_-	nickel transport ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	3.1e-20
SQE37424.1|2659019_2659835_-	Oligopeptide transporter putative ATPase domain protein	NA	G9BWD6	Planktothrix_phage	30.3	1.8e-13
SQE37425.1|2659831_2660701_-	Oligopeptide transporter putative membrane permease domain protein	NA	NA	NA	NA	NA
SQE37426.1|2660697_2661633_-	Oligopeptide transporter putative membrane permease domain protein	NA	NA	NA	NA	NA
SQE37427.1|2661645_2663244_-	Oligopeptide transporter putative substrate binding domain protein	NA	NA	NA	NA	NA
SQE37428.1|2663386_2664688_-	Uncharacterized protein conserved in bacteria	NA	NA	NA	NA	NA
SQE37429.1|2664680_2665499_-	nicotianamine synthase	NA	NA	NA	NA	NA
SQE37430.1|2665509_2666331_-	Putative Similar to diaminopimelate epimerase	NA	NA	NA	NA	NA
SQE37431.1|2667197_2667563_-	Uncharacterised protein	NA	NA	NA	NA	NA
SQE37432.1|2667825_2668545_-	Glutamate dehydrogenase	NA	A0A0G2Y8L6	Acanthamoeba_polyphaga_mimivirus	36.5	2.9e-07
SQE37433.1|2668876_2670415_+	aminobenzoyl-glutamate transport protein	NA	NA	NA	NA	NA
SQE37434.1|2670526_2670949_-|transposase	transposase	transposase	NA	NA	NA	NA
SQE37435.1|2671401_2671821_-	Protein of uncharacterised function (DUF1433)	NA	NA	NA	NA	NA
SQE37436.1|2671838_2672258_-	Protein of uncharacterised function (DUF1433)	NA	NA	NA	NA	NA
SQE37437.1|2672667_2674272_+|transposase	transposase IS4 family protein	transposase	A0ZS58	Staphylococcus_virus	44.4	1.1e-128
