The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	0	61595	4144451	transposase,tRNA	Natrialba_phage(12.5%)	57	NA	NA
SPR37242.1|0_1920_+|tRNA	tRNA uridine 5-carboxymethylaminomethyl modification protein	tRNA	NA	NA	NA	NA
SPR37247.1|1916_2609_+	glucose inhibited division protein B	NA	NA	NA	NA	NA
SPR37251.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
SPR37253.1|3409_4171_+	GNAT family acetyltransferase	NA	NA	NA	NA	NA
SPR37255.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
SPR37257.1|5124_5910_+	asparaginase	NA	NA	NA	NA	NA
SPR37260.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
SPR37262.1|8249_8531_+	preprotein translocase SecE subunit	NA	NA	NA	NA	NA
SPR37264.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
SPR37266.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
SPR37268.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
SPR37269.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
SPR37270.1|11160_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
SPR37271.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
SPR37273.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
SPR37274.1|20126_20588_-	lipoprotein	NA	NA	NA	NA	NA
SPR37275.1|20876_21947_+	membrane protein	NA	NA	NA	NA	NA
SPR37276.1|22269_24351_-	histidine kinase	NA	NA	NA	NA	NA
SPR37277.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
SPR37278.1|25685_26201_-	DNA-binding response regulator	NA	NA	NA	NA	NA
SPR37280.1|26575_27286_+	two component system response regulator	NA	NA	NA	NA	NA
SPR37281.1|27282_28233_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37282.1|28674_29103_-	hypothetical protein	NA	NA	NA	NA	NA
SPR37283.1|29141_30353_-	thiolase	NA	NA	NA	NA	NA
SPR37284.1|30364_30862_-	MaoC family protein	NA	NA	NA	NA	NA
SPR37285.1|31069_32005_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR37286.1|32178_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
SPR37287.1|33048_34470_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37288.1|34625_35576_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37289.1|35674_36625_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37290.1|36723_37674_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37291.1|37670_38861_-	MFS transporter	NA	NA	NA	NA	NA
SPR37293.1|39047_40022_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
SPR37295.1|40023_42162_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
SPR37296.1|42158_42698_+	D-glycero-beta-D-manno-heptose 17-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
SPR37298.1|42701_43430_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SPR37299.1|43416_44310_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37300.1|44380_44776_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
SPR37302.1|44785_45316_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
SPR37304.1|45761_46712_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37306.1|47322_47847_+	exported protein	NA	NA	NA	NA	NA
SPR37307.1|47818_48055_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR37308.1|48182_49076_+	membrane protein	NA	NA	NA	NA	NA
SPR37309.1|49079_49529_-	partial	NA	NA	NA	NA	NA
SPR37310.1|50245_51493_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
SPR37312.1|51489_52104_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37313.1|52239_53190_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37315.1|53288_54239_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37316.1|54326_55538_+	muropeptide transporter	NA	NA	NA	NA	NA
SPR37317.1|55649_56375_+	partial	NA	NA	NA	NA	NA
SPR37318.1|56397_56712_+	outer membrane porin protein precursor	NA	NA	NA	NA	NA
SPR37319.1|56769_57504_-	aspartate/glutamate racemase	NA	NA	NA	NA	NA
SPR37321.1|57509_58100_-	glutamate/aspartate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
SPR37322.1|58124_58814_-	glutamate/aspartate ABC transporter permease	NA	NA	NA	NA	NA
SPR37323.1|58810_59572_-	glutamate/aspartate ABC transporter permease	NA	NA	NA	NA	NA
SPR37325.1|59651_60551_-	glutamate/aspartate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR37326.1|60644_61595_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 2
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	168040	222657	4144451	protease,transposase,tRNA	Planktothrix_phage(14.29%)	50	NA	NA
SPR37474.1|168040_168991_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37476.1|169177_170428_+	partial	NA	G9BWD6	Planktothrix_phage	33.7	5.1e-20
SPR37478.1|170434_171337_-	membrane protein	NA	NA	NA	NA	NA
SPR37479.1|171314_171944_-	LemA family protein	NA	NA	NA	NA	NA
SPR37480.1|172226_173657_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
SPR37482.1|173690_174320_+	LysE family efflux protein	NA	NA	NA	NA	NA
SPR37484.1|174368_175976_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
SPR37485.1|176012_176684_+	exported protein	NA	NA	NA	NA	NA
SPR37487.1|176765_177242_-	bacterioferritin	NA	NA	NA	NA	NA
SPR37489.1|177448_178399_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37491.1|178395_178869_-	DNA-binding response regulator	NA	NA	NA	NA	NA
SPR37492.1|179514_180042_+	lipoprotein	NA	NA	NA	NA	NA
SPR37494.1|180133_180949_+	lipoprotein	NA	NA	NA	NA	NA
SPR37496.1|181009_181744_+	sulfurtransferase	NA	NA	NA	NA	NA
SPR37497.1|181781_183860_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
SPR37498.1|184109_184382_-	exported protein	NA	NA	NA	NA	NA
SPR37499.1|184483_185569_+	iron sulfur binding protein	NA	NA	NA	NA	NA
SPR37501.1|185572_187477_+	exported protein	NA	NA	NA	NA	NA
SPR37503.1|187473_191160_+	exported protein	NA	NA	NA	NA	NA
SPR37505.1|191220_191784_+	deoxycytidine triphosphate deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
SPR37507.1|191791_192214_-	conseved hypothetical protein	NA	NA	NA	NA	NA
SPR37508.1|192241_192661_-	lyase	NA	NA	NA	NA	NA
SPR37510.1|192689_193037_-	partial	NA	NA	NA	NA	NA
SPR37512.1|193310_193760_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37513.1|193914_196185_+	Orn/Arg/Lys decarboxylase	NA	NA	NA	NA	NA
SPR37514.1|196260_197466_+	exported protein	NA	NA	NA	NA	NA
SPR37516.1|197564_198515_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37518.1|198617_199253_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
SPR37519.1|199249_200143_+	metal transporter	NA	NA	NA	NA	NA
SPR37521.1|200537_201638_+	glycine cleavage system aminomethyltransferase	NA	NA	NA	NA	NA
SPR37522.1|201719_202094_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
SPR37524.1|202153_205018_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
SPR37526.1|205162_205903_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37528.1|205972_207184_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37529.1|207215_208181_+	exported protein	NA	NA	NA	NA	NA
SPR37530.1|208198_208696_+	partial	NA	NA	NA	NA	NA
SPR37532.1|208794_209745_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37534.1|209831_210782_+|transposase	transposase for IS1002	transposase	NA	NA	NA	NA
SPR37536.1|210938_211262_+	phosphate starvation-inducible protein	NA	NA	NA	NA	NA
SPR37538.1|211366_212407_-	hypothetical protein	NA	NA	NA	NA	NA
SPR37539.1|212412_213192_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
SPR37541.1|213237_213534_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR37543.1|213559_213835_-	methylmuconolactone isomerase	NA	NA	NA	NA	NA
SPR37544.1|213891_214536_-	3-oxoadipate CoA-transferase subunit B	NA	NA	NA	NA	NA
SPR37546.1|214535_215222_-	3-oxoadipate CoA-transferase subunit A	NA	NA	NA	NA	NA
SPR37548.1|215420_216203_+	transcriptional regulator	NA	NA	NA	NA	NA
SPR37549.1|216253_216979_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
SPR37551.1|217010_218360_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
SPR37553.1|218471_219404_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR37555.1|219861_222657_-|protease	autotransporter subtilisin-like protease	protease	NA	NA	NA	NA
>prophage 3
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	228649	283842	4144451	protease,transposase,tRNA	Bacillus_phage(25.0%)	50	NA	NA
SPR37563.1|228649_229600_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37564.1|229818_230514_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37565.1|230530_231943_+	oxidoreductase	NA	NA	NA	NA	NA
SPR37566.1|232055_233486_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
SPR37567.1|233527_235441_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA	NA
SPR37568.1|235759_236326_+	exported protein	NA	NA	NA	NA	NA
SPR37569.1|236467_237418_+	restriction endonuclease	NA	NA	NA	NA	NA
SPR37570.1|237532_238483_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37571.1|238569_239520_+|transposase	transposase for IS1002	transposase	NA	NA	NA	NA
SPR37572.1|239516_240467_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37573.1|240565_241363_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
SPR37574.1|241468_242185_-	MBL fold hydrolase	NA	NA	NA	NA	NA
SPR37575.1|242312_242723_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
SPR37576.1|242972_243728_+	partial	NA	D2K0C8	Staphylococcus_phage	55.0	4.6e-32
SPR37577.1|243744_244458_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37578.1|244531_245575_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR37579.1|245745_247848_+	membrane protein	NA	NA	NA	NA	NA
SPR37581.1|248401_249232_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR37582.1|249258_250215_+	putative exported protein	NA	NA	NA	NA	NA
SPR37583.1|250233_250725_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridinepyrophosphokinase	NA	NA	NA	NA	NA
SPR37584.1|250721_252077_-	poly(A) polymerase	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
SPR37585.1|252077_252776_-	hypothetical protein	NA	NA	NA	NA	NA
SPR37586.1|252772_253474_-	hypothetical protein	NA	NA	NA	NA	NA
SPR37587.1|253726_254776_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
SPR37588.1|254881_255823_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
SPR37589.1|255819_257709_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	1.9e-79
SPR37590.1|257795_258434_+	putative membrane protein	NA	NA	NA	NA	NA
SPR37591.1|258576_259821_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
SPR37592.1|259892_260429_-	hypothetical protein	NA	NA	NA	NA	NA
SPR37593.1|260580_261972_+	fumarate hydratase	NA	NA	NA	NA	NA
SPR37594.1|261988_262900_-	membrane protein	NA	NA	NA	NA	NA
SPR37595.1|263104_264088_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
SPR37596.1|264152_265052_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37597.1|265158_266913_+	gamma-glutamyltranspeptidase	NA	NA	NA	NA	NA
SPR37598.1|266920_268045_-	hypothetical protein	NA	NA	NA	NA	NA
SPR37599.1|268058_269039_-	exported protein	NA	NA	NA	NA	NA
SPR37600.1|269769_270720_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37601.1|271195_271825_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37602.1|271950_273528_+	cytochrome D ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
SPR37604.1|273543_274698_+	cytochrome D ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
SPR37605.1|274711_274837_+	putative exported protein	NA	NA	NA	NA	NA
SPR37607.1|274833_276585_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
SPR37609.1|276581_278261_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
SPR37610.1|278323_278872_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
SPR37611.1|278982_279771_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37612.1|280014_280293_+	exported protein	NA	NA	NA	NA	NA
SPR37613.1|280502_281357_+	outer membrane porin	NA	NA	NA	NA	NA
SPR37614.1|281336_282287_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37615.1|282564_282726_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37616.1|283392_283842_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
>prophage 4
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	360943	418583	4144451	transposase	Paramecium_bursaria_Chlorella_virus(16.67%)	55	NA	NA
SPR37703.1|360943_361894_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37704.1|362016_362745_+	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
SPR37705.1|362841_364020_+	membrane protein	NA	NA	NA	NA	NA
SPR37706.1|364016_364850_+	bis(5'-nucleosyl)-tetraphosphatase	NA	NA	NA	NA	NA
SPR37707.1|364886_365627_-	acyltransferase	NA	NA	NA	NA	NA
SPR37708.1|365746_366922_-	dihydroorotase	NA	NA	NA	NA	NA
SPR37709.1|366918_367872_-	aspartate carbamoyltransferase	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
SPR37710.1|367885_368287_-	Holliday junction resolvase	NA	NA	NA	NA	NA
SPR37711.1|368279_368885_-	DUF179 domain-containing protein	NA	NA	NA	NA	NA
SPR37712.1|369253_370102_+	phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
SPR37713.1|370098_370752_+	thiamine-phosphate pyrophosphorylase	NA	NA	NA	NA	NA
SPR37714.1|370768_372052_+	glutamate-1-semialdehyde 21-aminomutase	NA	NA	NA	NA	NA
SPR37715.1|372291_373917_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37717.1|374010_374412_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR37719.1|374436_374871_-	probable 4-hydroxybenzoyl CoA thioesterase	NA	NA	NA	NA	NA
SPR37721.1|374872_376522_-	acid-coenzyme A ligase	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
SPR37722.1|376562_377732_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR37724.1|377734_378598_-	hydratase/isomerase	NA	NA	NA	NA	NA
SPR37726.1|378619_379075_-	partial	NA	NA	NA	NA	NA
SPR37727.1|379409_381221_-	partial	NA	NA	NA	NA	NA
SPR37729.1|381961_382666_-	high-affinity branched-chain amino acid transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
SPR37731.1|382659_383454_-	putative branched-chain amino acid transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
SPR37732.1|383450_384416_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR37734.1|384419_385340_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR37735.1|385436_386600_-	putative ABC transporter substrate binding protein	NA	NA	NA	NA	NA
SPR37737.1|386822_387713_+	esterase	NA	NA	NA	NA	NA
SPR37739.1|387716_388220_+	MarR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR37741.1|388262_389261_+	hypothetical protein	NA	NA	NA	NA	NA
SPR37743.1|389257_390208_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37745.1|390775_391726_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37746.1|391785_392346_+	5'(3')-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
SPR37748.1|392475_393372_+	flagellar protein FlgA	NA	NA	NA	NA	NA
SPR37750.1|393368_393815_+	flagellar protein FlgA	NA	NA	NA	NA	NA
SPR37751.1|393848_394730_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37752.1|394843_396046_+	transporter	NA	NA	NA	NA	NA
SPR37753.1|396174_398034_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
SPR37754.1|398111_398921_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR37755.1|398991_399993_+	2-isopropylmalate synthase	NA	NA	NA	NA	NA
SPR37756.1|400024_400885_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
SPR37757.1|401084_402089_+	acetyl esterase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
SPR37758.1|402085_403672_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
SPR37760.1|403680_404607_+	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
SPR37761.1|404629_405256_+	putative regulatory protein	NA	NA	NA	NA	NA
SPR37762.1|405354_406305_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37764.1|406403_407387_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR37766.1|407313_408015_-	putative exported protein	NA	NA	NA	NA	NA
SPR37768.1|408063_408834_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
SPR37769.1|408830_410009_-	CoA transferase	NA	NA	NA	NA	NA
SPR37771.1|410176_411883_-	thiamine pyrophosphate enzyme	NA	NA	NA	NA	NA
SPR37773.1|411879_412776_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR37775.1|412816_414418_-	sulfurtransferase	NA	NA	NA	NA	NA
SPR37777.1|414455_415442_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR37778.1|415516_416116_-	Hypothetical protein	NA	NA	NA	NA	NA
SPR37780.1|416576_417557_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR37782.1|417632_418583_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 5
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	624996	742147	4144451	transposase,terminase,tail,tRNA	uncultured_Caudovirales_phage(14.29%)	117	NA	NA
SPR38082.1|624996_625947_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38084.1|626684_627029_+	putative membrane protein	NA	NA	NA	NA	NA
SPR38086.1|627086_627689_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
SPR38088.1|627706_628108_-	DoxX family protein	NA	NA	NA	NA	NA
SPR38090.1|628223_629135_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38091.1|629131_629713_+	NUDIX hydrolase	NA	NA	NA	NA	NA
SPR38093.1|629639_630440_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38095.1|630507_631242_+|tRNA	arginyl-tRNA-protein transferase	tRNA	NA	NA	NA	NA
SPR38096.1|631282_632332_+	dihydroorotate dehydrogenase	NA	NA	NA	NA	NA
SPR38098.1|632479_633058_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38103.1|633444_634422_+	exported protein	NA	NA	NA	NA	NA
SPR38105.1|634515_638871_-	dermonecrotic toxin	NA	NA	NA	NA	NA
SPR38106.1|639110_639959_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38108.1|640117_640930_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38110.1|640985_641936_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38111.1|642034_642835_-	inner membrane protein	NA	NA	NA	NA	NA
SPR38113.1|642896_643280_+	thioredoxin	NA	NA	NA	NA	NA
SPR38115.1|643291_644725_-	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
SPR38116.1|644931_645261_-	putative conserved inner membrane protein	NA	NA	NA	NA	NA
SPR38118.1|645263_646013_-	inner membrane protein	NA	NA	NA	NA	NA
SPR38120.1|646195_647116_+	branched-chain amino acid aminotransferase	NA	NA	NA	NA	NA
SPR38122.1|647162_647375_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
SPR38124.1|647397_647820_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38125.1|647836_648937_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38127.1|649033_650551_-	exported protein	NA	NA	NA	NA	NA
SPR38129.1|650626_651466_+	putative UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
SPR38131.1|651487_652360_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
SPR38134.1|652450_653545_-	outer membrane porin protein OmpQ	NA	NA	NA	NA	NA
SPR38136.1|653838_654789_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38138.1|654917_655805_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
SPR38140.1|655888_656248_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38142.1|656629_657667_-	inner membrane protein	NA	NA	NA	NA	NA
SPR38144.1|657983_659324_+	Xaa-Pro aminopeptidase	NA	NA	NA	NA	NA
SPR38145.1|659333_659786_-	inner membrane protein	NA	NA	NA	NA	NA
SPR38147.1|659882_661064_+	monooxygenase	NA	NA	NA	NA	NA
SPR38149.1|661129_662155_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38151.1|662195_662435_+	DNA-binding protein	NA	NA	NA	NA	NA
SPR38153.1|662504_664094_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
SPR38155.1|664093_664642_+	Crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
SPR38156.1|664722_665295_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
SPR38158.1|665313_666225_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38159.1|666298_667267_-	serine/threonine dehydratase	NA	NA	NA	NA	NA
SPR38161.1|667389_668463_+	Holliday junction DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
SPR38163.1|668467_670288_-	ATP-dependent DNA helicase	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
SPR38165.1|670364_671315_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38167.1|671872_672523_+	carbonic anhydrase	NA	NA	NA	NA	NA
SPR38169.1|672544_673963_-	amidase	NA	NA	NA	NA	NA
SPR38170.1|674032_674773_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR38171.1|674786_675515_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR38172.1|675525_676407_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR38173.1|676423_677131_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
SPR38174.1|677133_677892_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
SPR38175.1|678101_679844_+	sulfite reductase	NA	NA	NA	NA	NA
SPR38181.1|679836_680361_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38183.1|680400_681195_-	exported protein	NA	NA	NA	NA	NA
SPR38185.1|681362_682436_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38187.1|682534_683485_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38189.1|683736_683943_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38191.1|684014_685109_-	phage repressor protein	NA	NA	NA	NA	NA
SPR38192.1|685418_686117_-	phage-related membrane protein	NA	NA	NA	NA	NA
SPR38194.1|686370_687321_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38196.1|687996_688446_+	hypothetical protein	NA	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
SPR38197.1|688432_689710_+|terminase	phage terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
SPR38199.1|689712_691131_+	hypothetical protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
SPR38201.1|691102_692215_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	49.7	2.1e-102
SPR38203.1|692220_692463_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
SPR38205.1|692585_693188_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
SPR38206.1|693616_693733_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38208.1|693757_694567_-	partial	NA	NA	NA	NA	NA
SPR38210.1|694665_695616_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38212.1|695717_696281_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	70.4	2.0e-64
SPR38214.1|696290_696542_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38216.1|696604_697087_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
SPR38217.1|697088_697289_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38219.1|697288_697684_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
SPR38220.1|697680_698079_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
SPR38222.1|698075_698498_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38224.1|698541_698688_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38226.1|699437_699779_+	hypothetical protein	NA	A0A1S5R1H0	Pseudomonas_phage	35.2	1.2e-08
SPR38228.1|699788_700118_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
SPR38230.1|700147_700426_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.5e-14
SPR38232.1|700451_703064_+|tail	phage tail protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
SPR38234.1|703500_704034_+	hypothetical protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
SPR38235.1|704030_704420_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
SPR38237.1|704412_708369_+	hypothetical protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
SPR38239.1|708412_708790_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38241.1|708854_708968_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38243.1|709271_710084_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38245.1|710309_710861_+	phage lysozyme	NA	NA	NA	NA	NA
SPR38247.1|711372_711654_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38248.1|712203_712875_-	hypothetical protein	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
SPR38249.1|713230_713917_-	two component system response regulator	NA	NA	NA	NA	NA
SPR38250.1|713897_714470_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
SPR38251.1|714535_716266_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
SPR38252.1|716318_716747_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38253.1|716749_717430_+	protein TolQ	NA	NA	NA	NA	NA
SPR38255.1|717429_717888_+	protein TolR	NA	NA	NA	NA	NA
SPR38257.1|717924_718899_+	proline-rich inner membrane protein	NA	NA	NA	NA	NA
SPR38259.1|718915_720232_+	translocation protein TolB	NA	NA	NA	NA	NA
SPR38260.1|720263_720761_+	putative peptidoglycan-associated lipoprotein	NA	NA	NA	NA	NA
SPR38262.1|720847_721537_+	putative periplasmic protein	NA	NA	NA	NA	NA
SPR38264.1|721536_722586_+	ABC transporter permease	NA	NA	NA	NA	NA
SPR38265.1|722582_723377_+	putative ABC transport ATP-binding subunit	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
SPR38267.1|725558_726509_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38268.1|726488_728504_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR38270.1|728646_729876_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38272.1|729878_731321_-	pyruvate kinase	NA	NA	NA	NA	NA
SPR38274.1|731425_732571_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
SPR38276.1|732602_733400_-	rRNA small subunit methyltransferase A	NA	NA	NA	NA	NA
SPR38277.1|733424_734984_-	chaperone SurA	NA	NA	NA	NA	NA
SPR38279.1|734980_737347_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
SPR38281.1|737462_738566_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38282.1|738565_739258_+	nucleotidyl transferase	NA	NA	NA	NA	NA
SPR38284.1|739473_740103_+	putative inner membrane protein	NA	NA	NA	NA	NA
SPR38286.1|740087_740429_-	putative pterin-4-alpha-carbinolamine dehydratase	NA	NA	NA	NA	NA
SPR38288.1|740488_741091_-	outer membrane protein	NA	NA	NA	NA	NA
SPR38290.1|741196_742147_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 6
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	753434	821009	4144451	transposase	Streptococcus_phage(25.0%)	54	NA	NA
SPR38310.1|753434_754385_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38312.1|754704_754899_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38314.1|755039_756137_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
SPR38315.1|756170_757436_+	exported protein	NA	NA	NA	NA	NA
SPR38318.1|757593_758544_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38320.1|758787_759378_+	exported protein	NA	NA	NA	NA	NA
SPR38322.1|759393_761799_-	ferric siderophore receptor	NA	NA	NA	NA	NA
SPR38323.1|761957_762929_-	membrane protein	NA	NA	NA	NA	NA
SPR38325.1|763060_763585_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
SPR38327.1|763544_764495_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38328.1|764716_766912_-	DNA methylase	NA	NA	NA	NA	NA
SPR38330.1|766984_767413_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR38332.1|767514_768465_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38334.1|768580_769024_-	putative transcriptional regulator	NA	NA	NA	NA	NA
SPR38336.1|769086_769881_+	DNA-binding response regulator	NA	NA	NA	NA	NA
SPR38338.1|770046_771183_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
SPR38340.1|771253_772387_-	probable GTP-binding protein	NA	NA	NA	NA	NA
SPR38341.1|772536_772797_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
SPR38343.1|772830_773142_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
SPR38345.1|773566_774715_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38346.1|774829_775795_+	octaprenyl-diphosphate synthase	NA	NA	NA	NA	NA
SPR38348.1|776063_776930_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38349.1|777060_779109_+	hydantoin utilization protein A	NA	NA	NA	NA	NA
SPR38351.1|779126_781124_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
SPR38352.1|781158_782496_+	amino acid deaminase	NA	NA	NA	NA	NA
SPR38354.1|782758_784612_+|transposase	phusion between IS481 transposase and tripartite tricarboxylate transporter family receptor	transposase	NA	NA	NA	NA
SPR38356.1|784666_786148_+	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
SPR38358.1|786163_786721_-	cyclolysin-activating lysine-acyltransferase	NA	NA	NA	NA	NA
SPR38359.1|787199_792320_+	bifunctional hemolysin-adenylate cyclase	NA	NA	NA	NA	NA
SPR38361.1|792397_794536_+	cyclolysin secretion/procession ATP-binding protein	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
SPR38363.1|794532_795855_+	cyclolysin secretion protein CyaD	NA	NA	NA	NA	NA
SPR38364.1|795856_797281_+	cyclolysin secretion protein CyaE	NA	NA	NA	NA	NA
SPR38366.1|797374_798280_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38368.1|798344_799259_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
SPR38370.1|800096_800780_+	glutamate/aspartate transporter permease GltK	NA	NA	NA	NA	NA
SPR38371.1|800811_801540_+	glutamate/aspartate transport ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.4e-32
SPR38373.1|801569_802430_+	aminotransferase	NA	NA	NA	NA	NA
SPR38375.1|802437_803004_-	membrane protein	NA	NA	NA	NA	NA
SPR38377.1|803092_804049_-	exported protein	NA	NA	NA	NA	NA
SPR38378.1|804093_804846_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
SPR38379.1|804842_806588_-	acetolactate synthase large subunit	NA	NA	NA	NA	NA
SPR38380.1|806720_807407_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38382.1|807807_808746_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38384.1|808761_809484_-	GntR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR38385.1|809628_810636_-	Zinc-binding dehydrogenase	NA	NA	NA	NA	NA
SPR38388.1|810676_812209_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
SPR38390.1|812205_813303_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38391.1|813320_814103_-	membrane protein	NA	NA	NA	NA	NA
SPR38393.1|814114_814978_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
SPR38395.1|814996_816094_-	exported protein	NA	NA	NA	NA	NA
SPR38397.1|816162_817062_-	dioxygenase	NA	NA	NA	NA	NA
SPR38399.1|817123_818818_-	acetolactate synthase large subunit	NA	NA	NA	NA	NA
SPR38400.1|819017_819953_-	mechanosensitive channel protein	NA	NA	NA	NA	NA
SPR38402.1|820058_821009_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 7
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	860392	920219	4144451	transposase,holin	Vibrio_phage(25.0%)	50	NA	NA
SPR38459.1|860392_861343_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38461.1|861360_861915_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38463.1|861916_862351_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38465.1|862347_862782_+	exported protein	NA	NA	NA	NA	NA
SPR38466.1|862765_863569_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
SPR38468.1|863585_864401_-	DNA repair exonuclease	NA	NA	NA	NA	NA
SPR38470.1|864397_865213_-	diacylglycerol kinase	NA	NA	NA	NA	NA
SPR38472.1|865359_866061_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38474.1|866088_868047_-|holin	high-affinity choline transport protein	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
SPR38475.1|868129_869080_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38477.1|869300_869969_+	transcriptional regulator	NA	NA	NA	NA	NA
SPR38479.1|870092_871199_+	HlyD family secretion protein	NA	NA	NA	NA	NA
SPR38481.1|871211_874325_+	multidrug efflux system membrane protein	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
SPR38482.1|874321_875815_+	multidrug efflux system outer membrane protein	NA	NA	NA	NA	NA
SPR38484.1|875829_876501_+	transcriptional regulator	NA	NA	NA	NA	NA
SPR38486.1|876544_876997_-	azurin	NA	NA	NA	NA	NA
SPR38487.1|877179_877827_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR38489.1|877930_879979_+	hydantoin utilization protein A	NA	NA	NA	NA	NA
SPR38491.1|879975_881988_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
SPR38493.1|882013_883348_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38495.1|883456_884449_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR38497.1|884515_886600_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38499.1|886624_887596_-	exported protein	NA	NA	NA	NA	NA
SPR38500.1|887724_888756_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38502.1|888759_889911_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
SPR38504.1|890129_891005_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38506.1|891082_891907_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
SPR38507.1|892103_893033_-	IS110 family	NA	NA	NA	NA	NA
SPR38509.1|893316_894300_-	putative exported protein	NA	NA	NA	NA	NA
SPR38511.1|894358_895486_-	argininosuccinate lyase	NA	NA	NA	NA	NA
SPR38513.1|895898_897287_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38515.1|897317_898307_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR38517.1|898417_899650_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
SPR38518.1|899931_900732_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38520.1|900754_902986_-|holin	high-affinity choline transport protein	holin	NA	NA	NA	NA
SPR38522.1|903773_904220_-	protein translocase subunit SecG	NA	NA	NA	NA	NA
SPR38523.1|904241_904988_-	triosephosphate isomerase	NA	NA	NA	NA	NA
SPR38525.1|905131_906109_-	NAD(P)H quinone oxidoreductase	NA	NA	NA	NA	NA
SPR38527.1|906808_907354_+	hypothetical protein	NA	K4HZX4	Acidithiobacillus_phage	30.5	3.0e-09
SPR38528.1|907347_908565_-	threonine dehydratase catabolic	NA	NA	NA	NA	NA
SPR38530.1|908705_909656_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38531.1|909652_910372_-	putative lipoprotein	NA	NA	NA	NA	NA
SPR38533.1|910492_912652_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
SPR38535.1|912742_913012_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
SPR38537.1|913305_913833_+	lipoprotein	NA	NA	NA	NA	NA
SPR38539.1|913851_914631_-	putative CDP-diacylglycerol--serine O-phosphatidyltransferase protein	NA	NA	NA	NA	NA
SPR38540.1|914798_915815_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
SPR38541.1|915887_916379_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
SPR38542.1|916389_918105_-	acetolactate synthase large subunit	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
SPR38543.1|919268_920219_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 8
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	942023	990992	4144451	transposase	Staphylococcus_phage(28.57%)	47	NA	NA
SPR38576.1|942023_942974_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38578.1|943038_943248_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38579.1|943407_943620_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38581.1|943739_944858_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
SPR38582.1|944954_945170_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38585.1|945363_945615_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38586.1|945727_946678_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38588.1|946674_947058_-	putative ferredoxin	NA	NA	NA	NA	NA
SPR38589.1|947112_948927_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
SPR38591.1|949076_949904_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
SPR38593.1|949949_950930_+	oxidoreductase	NA	NA	NA	NA	NA
SPR38594.1|950926_951139_-	putative membrane protein	NA	NA	NA	NA	NA
SPR38596.1|951135_952317_-	membrane protein	NA	NA	NA	NA	NA
SPR38598.1|952480_953215_+	serine/threonine protein phosphatase 1	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.6	3.8e-63
SPR38599.1|953216_955829_-	penicillin-binding protein 1A	NA	NA	NA	NA	NA
SPR38601.1|955964_957878_-	putative peptidase	NA	NA	NA	NA	NA
SPR38603.1|958493_958904_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38604.1|959001_960087_+	DNA-damage-inducible protein p	NA	NA	NA	NA	NA
SPR38606.1|960185_961136_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38608.1|961234_962185_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38610.1|962164_962260_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38612.1|962272_962824_-	decarboxylase	NA	NA	NA	NA	NA
SPR38614.1|964101_965076_+	exported protein	NA	NA	NA	NA	NA
SPR38615.1|965095_965968_+	binding-protein-dependent transport system inner membrane protein	NA	NA	NA	NA	NA
SPR38617.1|965964_966792_+	binding-protein-dependent transport system inner membrane protein	NA	NA	NA	NA	NA
SPR38619.1|966815_967220_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.0	5.7e-13
SPR38621.1|967703_969116_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38622.1|969220_970675_+	succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
SPR38624.1|970724_972128_-	tricarballylate dehydrogenase	NA	NA	NA	NA	NA
SPR38626.1|972148_973333_-	citrate utilization protein B	NA	NA	NA	NA	NA
SPR38628.1|973375_974608_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38629.1|974721_975537_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38631.1|975578_976475_+	putative transcriptional regulator	NA	NA	NA	NA	NA
SPR38633.1|976529_977390_-	fumarylacetoacetate family hydrolase	NA	NA	NA	NA	NA
SPR38635.1|977467_978541_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38637.1|978666_979641_-	exported protein	NA	NA	NA	NA	NA
SPR38639.1|979779_980769_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38641.1|980793_981369_-	membrane protein	NA	NA	NA	NA	NA
SPR38642.1|981462_983121_-	CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	24.9	2.3e-20
SPR38644.1|983132_984116_-	exported protein	NA	NA	NA	NA	NA
SPR38646.1|984120_984543_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38648.1|985789_986149_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38649.1|986285_987236_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38651.1|987232_988207_-	exported protein	NA	NA	NA	NA	NA
SPR38653.1|988331_989243_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
SPR38655.1|989519_989912_-	phage-like protein	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
SPR38656.1|990041_990992_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 9
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1127327	1179053	4144451	protease,transposase,tRNA	Planktothrix_phage(18.18%)	46	NA	NA
SPR38860.1|1127327_1128278_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38862.1|1128645_1129422_-	phosphate transporter ATP-binding protein PstB	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
SPR38863.1|1129466_1130324_-	phosphate transport system permease protein	NA	NA	NA	NA	NA
SPR38865.1|1130345_1131362_-	phosphate ABC transporter permease PstC	NA	NA	NA	NA	NA
SPR38867.1|1131496_1132537_-	phosphate-binding periplasmic protein precursor	NA	M4QHS4	Cyanophage	40.2	2.1e-51
SPR38868.1|1132731_1134813_-	polyphosphate kinase	NA	NA	NA	NA	NA
SPR38869.1|1135048_1136542_+	exopolyphosphatase	NA	NA	NA	NA	NA
SPR38870.1|1136660_1136771_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38871.1|1136772_1137567_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38872.1|1137787_1139146_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
SPR38873.1|1139142_1139985_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
SPR38874.1|1140003_1141890_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
SPR38875.1|1142127_1142760_-	rRNA large subunit methyltransferase E	NA	NA	NA	NA	NA
SPR38876.1|1142778_1143381_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38878.1|1143532_1144483_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38879.1|1144653_1145064_+	partial	NA	NA	NA	NA	NA
SPR38881.1|1145285_1146086_-	membrane protein	NA	NA	NA	NA	NA
SPR38883.1|1146129_1147116_-	homoserine kinase	NA	NA	NA	NA	NA
SPR38885.1|1147291_1148269_+|tRNA	tRNA-dihydrouridine synthase A	tRNA	NA	NA	NA	NA
SPR38887.1|1148265_1148706_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38888.1|1149636_1150263_-	partial	NA	NA	NA	NA	NA
SPR38890.1|1150375_1150834_-	CBS domain-containing protein	NA	NA	NA	NA	NA
SPR38892.1|1150870_1152184_-	membrane protein	NA	NA	NA	NA	NA
SPR38894.1|1152201_1152573_+	membrane protein	NA	NA	NA	NA	NA
SPR38895.1|1152569_1154033_+	hypothetical protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
SPR38897.1|1154173_1154902_+	two component system response regulator	NA	NA	NA	NA	NA
SPR38899.1|1154883_1157733_-	two component system sensor histidine kinase	NA	NA	NA	NA	NA
SPR38901.1|1157945_1158896_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38903.1|1159063_1159888_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
SPR38905.1|1159887_1160766_+	high-affinity branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR38906.1|1161017_1161179_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38908.1|1161455_1161614_-	hypothetical protein	NA	NA	NA	NA	NA
SPR38910.1|1161670_1162786_+	amino acids binding protein	NA	NA	NA	NA	NA
SPR38912.1|1162793_1163609_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
SPR38913.1|1163605_1165471_+	long-chain fatty-acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
SPR38915.1|1165549_1166182_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38917.1|1166178_1166481_-	membrane protein	NA	NA	NA	NA	NA
SPR38918.1|1166523_1168044_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
SPR38920.1|1168050_1168806_-	probable short chain dehydrogenase	NA	NA	NA	NA	NA
SPR38922.1|1168835_1169717_-	peptide chain release factor 2	NA	NA	NA	NA	NA
SPR38924.1|1170042_1171779_-	single-stranded-DNA-specific exonuclease	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
SPR38928.1|1171724_1172666_-	exported protein	NA	NA	NA	NA	NA
SPR38930.1|1172711_1173992_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA	NA
SPR38931.1|1173984_1174680_+	lipoprotein releasing system ATP-binding protein	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
SPR38933.1|1174713_1175541_+	putative deoxyribonuclease	NA	NA	NA	NA	NA
SPR38935.1|1175822_1179053_+|protease	serine protease	protease	NA	NA	NA	NA
>prophage 10
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1185614	1251203	4144451	transposase,tRNA	Erysipelothrix_phage(25.0%)	57	NA	NA
SPR38940.1|1185614_1187411_+|transposase	IS481 transposase phused to partial competence protein	transposase	NA	NA	NA	NA
SPR38942.1|1187452_1188379_+	hydrolase	NA	NA	NA	NA	NA
SPR38944.1|1188448_1189294_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38945.1|1189361_1189916_+	transcription elongation factor	NA	NA	NA	NA	NA
SPR38947.1|1189962_1190913_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38949.1|1191011_1191635_-	serotype 2 fimbrial subunit	NA	NA	NA	NA	NA
SPR38951.1|1191813_1194096_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
SPR38952.1|1194250_1196947_-	pyruvate dehydrogenase subunit E1	NA	NA	NA	NA	NA
SPR38953.1|1197072_1197561_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
SPR38954.1|1197596_1199459_+	membrane protein	NA	NA	NA	NA	NA
SPR38955.1|1199437_1199647_+	oligopeptide transporter OPT family	NA	NA	NA	NA	NA
SPR38956.1|1199971_1202842_+	2-oxoglutarate dehydrogenase subunit E1	NA	NA	NA	NA	NA
SPR38957.1|1202887_1204102_+	2-oxoglutarate dehydrogenase complex subunit dihydrolipoamide succinyltransferase	NA	NA	NA	NA	NA
SPR38958.1|1204331_1205759_+	2-oxoglutarate dehydrogenase complex subunit dihydrolipoamide dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
SPR38959.1|1205856_1206948_+	hypothetical protein	NA	NA	NA	NA	NA
SPR38960.1|1206960_1207719_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
SPR38961.1|1207806_1208709_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR38962.1|1208705_1209656_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38963.1|1209785_1210769_-	exported protein	NA	NA	NA	NA	NA
SPR38964.1|1210823_1211546_-	probable short-chain dehydrogenase	NA	NA	NA	NA	NA
SPR38965.1|1212013_1212880_+	partial	NA	NA	NA	NA	NA
SPR38966.1|1213024_1214380_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
SPR38968.1|1214460_1216836_-	transcription accessory protein	NA	NA	NA	NA	NA
SPR38970.1|1217000_1219076_+	ATP-dependent helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
SPR38972.1|1219137_1219986_-	outer membrane protein assembly factor	NA	NA	NA	NA	NA
SPR38974.1|1220039_1221002_+	ribosomal large subunit pseudouridine synthase D	NA	NA	NA	NA	NA
SPR38975.1|1220989_1221745_+	laccase domain-containing protein	NA	NA	NA	NA	NA
SPR38977.1|1221852_1223490_+	poly-beta-hydroxybutyrate polymerase	NA	NA	NA	NA	NA
SPR38979.1|1223557_1224295_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
SPR38981.1|1224397_1224973_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR38983.1|1225145_1225682_+	exported protein	NA	NA	NA	NA	NA
SPR38984.1|1225714_1226029_+	putative exported protein	NA	NA	NA	NA	NA
SPR38986.1|1226044_1226890_+	membrane protein	NA	NA	NA	NA	NA
SPR38988.1|1226928_1228308_+	4Fe-4S binding domain-containing protein	NA	NA	NA	NA	NA
SPR38989.1|1228385_1229267_+	conserved hypotheticals protein	NA	NA	NA	NA	NA
SPR38991.1|1229365_1230316_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38993.1|1230414_1231365_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR38994.1|1231361_1231772_-	dioxygenase	NA	NA	NA	NA	NA
SPR38996.1|1231879_1232734_-	2-pyrone-46-dicarboxylic acid hydrolase	NA	NA	NA	NA	NA
SPR38998.1|1232726_1233689_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR39000.1|1233734_1234859_-	racemase	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
SPR39002.1|1234964_1235843_+	probable LysR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR39003.1|1235967_1236747_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
SPR39005.1|1236900_1238322_+	membrane protein	NA	NA	NA	NA	NA
SPR39007.1|1238756_1240454_+	sodium/solute symporter	NA	NA	NA	NA	NA
SPR39009.1|1240482_1240605_+	putative membrane protein	NA	NA	NA	NA	NA
SPR39011.1|1240680_1241793_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
SPR39012.1|1241948_1242695_+	adolase	NA	NA	NA	NA	NA
SPR39014.1|1242702_1243608_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39016.1|1243750_1244668_+	oxidoreductase	NA	NA	NA	NA	NA
SPR39017.1|1244707_1245661_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR39019.1|1245685_1246264_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39021.1|1246729_1247863_-	partial	NA	A0A0R6PEZ3	Moraxella_phage	41.2	1.4e-35
SPR39023.1|1248114_1248546_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39025.1|1248623_1248977_-	exported protein	NA	NA	NA	NA	NA
SPR39027.1|1249060_1250050_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
SPR39028.1|1250252_1251203_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 11
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1350026	1418513	4144451	transposase	Planktothrix_phage(33.33%)	59	NA	NA
SPR39189.1|1350026_1350977_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39190.1|1351078_1351735_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
SPR39191.1|1351745_1352384_-	glutathione S-transferase	NA	NA	NA	NA	NA
SPR39192.1|1352747_1353356_-	partial	NA	NA	NA	NA	NA
SPR39193.1|1353363_1353720_+	partial	NA	NA	NA	NA	NA
SPR39194.1|1353801_1354503_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
SPR39195.1|1354503_1355271_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
SPR39196.1|1355267_1356506_-	leucine/isoleucine/valine ABC transporter permease	NA	NA	NA	NA	NA
SPR39197.1|1356505_1357432_-	high-affinity branched-chain amino acid transport system permease protein	NA	NA	NA	NA	NA
SPR39198.1|1357534_1358650_-	leucine/isoleucine/valine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR39199.1|1358665_1359616_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39200.1|1359969_1360551_-	membrane protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
SPR39201.1|1360547_1361381_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
SPR39202.1|1361591_1362905_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
SPR39203.1|1363081_1363963_+	sn-glycerol-3-phosphate transport system permease protein	NA	NA	NA	NA	NA
SPR39204.1|1363982_1364834_+	sn-glycerol-3-phosphate transport system permease protein	NA	NA	NA	NA	NA
SPR39205.1|1364886_1365975_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
SPR39206.1|1366085_1367213_-	leu/Ile/val-binding protein	NA	NA	NA	NA	NA
SPR39207.1|1367333_1368059_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39208.1|1368157_1369108_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39209.1|1369329_1369707_-	putative membrane protein	NA	NA	NA	NA	NA
SPR39211.1|1369854_1370352_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39212.1|1370348_1370876_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39213.1|1371009_1371825_+	putative exported protein	NA	NA	NA	NA	NA
SPR39214.1|1371837_1373019_-	L-lactate dehydrogenase	NA	NA	NA	NA	NA
SPR39215.1|1373066_1373960_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
SPR39216.1|1374086_1374557_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39217.1|1374682_1375510_-	lipoprotein	NA	NA	NA	NA	NA
SPR39218.1|1375538_1376315_-	putative lipoate-protein ligase A	NA	NA	NA	NA	NA
SPR39219.1|1376311_1376587_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39220.1|1376601_1377066_-	acetyltransferase	NA	NA	NA	NA	NA
SPR39221.1|1377077_1377779_-	glutathione transferase	NA	NA	NA	NA	NA
SPR39222.1|1377888_1378389_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
SPR39223.1|1378471_1381102_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39224.1|1381277_1381613_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
SPR39225.1|1381800_1383249_+	CoA-transferase	NA	NA	NA	NA	NA
SPR39226.1|1383306_1383651_+	putative arsenate reductase	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
SPR39227.1|1383757_1384297_-	peroxiredoxin	NA	NA	NA	NA	NA
SPR39228.1|1384389_1385340_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39229.1|1386691_1387096_-	membrane protein	NA	NA	NA	NA	NA
SPR39230.1|1388332_1388656_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39231.1|1388658_1389546_-	putative exported protein	NA	NA	NA	NA	NA
SPR39232.1|1389578_1390004_-	universal stress family protein	NA	NA	NA	NA	NA
SPR39234.1|1390075_1390429_-	partial	NA	NA	NA	NA	NA
SPR39236.1|1390668_1391175_-	putative membrane protein	NA	NA	NA	NA	NA
SPR39238.1|1391213_1392545_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39240.1|1392604_1393420_+	YggS family pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
SPR39241.1|1393416_1394271_+	pyridoxine kinase	NA	NA	NA	NA	NA
SPR39243.1|1394371_1396291_+	ATPase	NA	NA	NA	NA	NA
SPR39245.1|1401243_1402998_-	alpha amylase	NA	NA	NA	NA	NA
SPR39247.1|1402994_1405115_-	glycosyl hydrolase	NA	NA	NA	NA	NA
SPR39249.1|1405119_1407315_-	14-alpha-glucan-branching protein	NA	NA	NA	NA	NA
SPR39250.1|1407311_1410653_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
SPR39252.1|1413455_1414406_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39255.1|1414471_1414651_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39256.1|1414767_1415523_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39258.1|1415509_1416655_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39259.1|1416708_1417545_-	lysylphosphatidylglycerol synthetase family protein	NA	NA	NA	NA	NA
SPR39261.1|1417562_1418513_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 12
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1522235	1580479	4144451	transposase,tRNA	Planktothrix_phage(28.57%)	55	NA	NA
SPR39436.1|1522235_1523186_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39437.1|1523303_1524230_+	putative membrane protein	NA	NA	NA	NA	NA
SPR39439.1|1524295_1525453_+	membrane protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
SPR39441.1|1525433_1525901_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
SPR39443.1|1526048_1526999_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39445.1|1527015_1527450_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39446.1|1527439_1527790_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39448.1|1527986_1529141_+	probable acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR39450.1|1529137_1530310_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
SPR39452.1|1530357_1531251_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
SPR39454.1|1531296_1531734_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39455.1|1531793_1532483_+	membrane protein	NA	NA	NA	NA	NA
SPR39457.1|1532492_1533443_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39459.1|1533541_1534492_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39461.1|1534590_1535553_-	transaldolase B	NA	H6WFR1	Cyanophage	29.2	7.5e-11
SPR39463.1|1535779_1536934_+	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
SPR39464.1|1536944_1540187_+	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA	NA
SPR39466.1|1540336_1541044_+	partial	NA	NA	NA	NA	NA
SPR39468.1|1541208_1541853_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
SPR39470.1|1541863_1542763_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39472.1|1542810_1543896_-	probable ATP-binding component of ABC transporter	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
SPR39473.1|1543892_1545587_-	ABC transporter permease	NA	NA	NA	NA	NA
SPR39475.1|1545620_1545779_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39477.1|1545765_1546716_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39479.1|1547202_1548228_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
SPR39481.1|1548269_1549331_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
SPR39482.1|1549364_1550201_+	lipoprotein	NA	NA	NA	NA	NA
SPR39484.1|1550210_1550753_-	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
SPR39486.1|1550766_1552059_-	molybdopterin biosynthesis protein	NA	NA	NA	NA	NA
SPR39488.1|1552055_1552649_-	molybdenum cofactor guanylyltransferase	NA	NA	NA	NA	NA
SPR39490.1|1552801_1553899_+	putative iron sulfur binding protein	NA	NA	NA	NA	NA
SPR39492.1|1553905_1554466_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39494.1|1554462_1555143_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39496.1|1555199_1557257_+	iron-sulfur binding protein	NA	NA	NA	NA	NA
SPR39498.1|1557253_1557883_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39500.1|1558034_1558244_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39502.1|1558258_1561228_+	formate dehydrogenase	NA	NA	NA	NA	NA
SPR39504.1|1561473_1561866_+	formate dehydrogenase iron-sulfur subunit	NA	NA	NA	NA	NA
SPR39506.1|1561862_1562096_+	putative lipoprotein	NA	NA	NA	NA	NA
SPR39508.1|1562108_1563266_+	formate dehydrogenase subunit C	NA	NA	NA	NA	NA
SPR39509.1|1563288_1563663_+	exported protein	NA	NA	NA	NA	NA
SPR39511.1|1563696_1564812_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39513.1|1565711_1566416_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
SPR39515.1|1566412_1567231_+	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR39516.1|1567514_1568918_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
SPR39518.1|1568932_1569583_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
SPR39519.1|1569664_1570741_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
SPR39520.1|1570927_1572058_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
SPR39521.1|1572228_1573812_+	membrane protein	NA	NA	NA	NA	NA
SPR39522.1|1573815_1574628_+|tRNA	tRNA pseudouridine synthase A	tRNA	NA	NA	NA	NA
SPR39523.1|1574772_1575867_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR39524.1|1576078_1576708_+	membrane protein	NA	NA	NA	NA	NA
SPR39525.1|1576710_1578378_+	membrane protein	NA	NA	NA	NA	NA
SPR39526.1|1578392_1579049_+	N-(5'-phosphoribosyl)anthranilate isomerase	NA	NA	NA	NA	NA
SPR39527.1|1579528_1580479_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 13
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1626161	1692488	4144451	transposase	Streptococcus_virus(10.0%)	60	NA	NA
SPR39615.1|1626161_1627112_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39616.1|1627118_1628231_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
SPR39618.1|1628917_1630120_+	membrane protein	NA	NA	NA	NA	NA
SPR39620.1|1630155_1630302_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39622.1|1630323_1632984_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39623.1|1632996_1636401_+	nuclease/helicase	NA	NA	NA	NA	NA
SPR39625.1|1637068_1639294_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
SPR39627.1|1639340_1639667_+	nucleoid-associated protein	NA	NA	NA	NA	NA
SPR39628.1|1639717_1640326_+	recombination protein RecR	NA	NA	NA	NA	NA
SPR39630.1|1640424_1641375_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39632.1|1641444_1642209_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39634.1|1642205_1642742_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39636.1|1642908_1643760_-	membrane protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
SPR39638.1|1643819_1644446_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39640.1|1644442_1645393_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39642.1|1645491_1646613_-	exported protein	NA	NA	NA	NA	NA
SPR39644.1|1646593_1647595_-	aminopeptidase	NA	NA	NA	NA	NA
SPR39645.1|1647700_1649113_-	thiol oxidoreductase	NA	NA	NA	NA	NA
SPR39647.1|1649208_1650513_-	exported protein	NA	NA	NA	NA	NA
SPR39649.1|1650624_1651182_-	membrane protein	NA	NA	NA	NA	NA
SPR39651.1|1651452_1652007_+	chromate reductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
SPR39652.1|1652462_1652678_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39654.1|1652932_1655530_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
SPR39656.1|1655526_1656714_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39657.1|1656982_1657324_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39659.1|1657370_1657985_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
SPR39661.1|1658073_1659195_-	lipoprotein	NA	NA	NA	NA	NA
SPR39663.1|1659212_1660118_-	dihydrodipicolinate synthase	NA	NA	NA	NA	NA
SPR39665.1|1660203_1660602_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39666.1|1661010_1661961_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39667.1|1662142_1662895_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR39668.1|1663023_1663623_+	glutamine ABC transporter permease	NA	NA	NA	NA	NA
SPR39669.1|1663619_1664348_+	glutamine transport ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
SPR39670.1|1664360_1666640_-	guanosine-3'5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
SPR39671.1|1666664_1666868_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
SPR39672.1|1666909_1667542_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	2.4e-13
SPR39673.1|1667677_1668595_-	cytochrome C	NA	NA	NA	NA	NA
SPR39674.1|1668591_1669305_-	cytochrome C	NA	NA	NA	NA	NA
SPR39675.1|1669542_1670313_+	putative oxidoreductase	NA	NA	NA	NA	NA
SPR39676.1|1670317_1670917_-	NlpC/P60 family protein	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
SPR39677.1|1671161_1672652_+	AMP nucleosidase	NA	NA	NA	NA	NA
SPR39679.1|1672710_1672995_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR39681.1|1672991_1673120_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39684.1|1673132_1673288_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39686.1|1673560_1674487_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39687.1|1674623_1675364_+	ribonuclease PH	NA	NA	NA	NA	NA
SPR39689.1|1675530_1676907_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39691.1|1677088_1677994_+	probable transcriptional regulator	NA	NA	NA	NA	NA
SPR39693.1|1678076_1679768_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.1	1.0e-10
SPR39694.1|1679645_1681448_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39696.1|1681574_1682216_+	non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
SPR39698.1|1682314_1683265_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39699.1|1683286_1684507_+	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
SPR39702.1|1684692_1686105_+	glutamine synthetase	NA	NA	NA	NA	NA
SPR39703.1|1686168_1687236_+	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
SPR39705.1|1687235_1688723_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
SPR39707.1|1688732_1689677_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39709.1|1689836_1690535_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39710.1|1690612_1691518_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39712.1|1691537_1692488_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 14
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1728352	1783943	4144451	transposase	uncultured_Caudovirales_phage(40.0%)	54	NA	NA
SPR39761.1|1728352_1729303_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39762.1|1729361_1730135_+	oxidoreductase	NA	NA	NA	NA	NA
SPR39765.1|1730127_1731684_+	capsular polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
SPR39766.1|1731680_1732631_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39768.1|1733094_1733982_+	oxidoreductase	NA	NA	NA	NA	NA
SPR39770.1|1733957_1734560_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39772.1|1734799_1735501_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
SPR39773.1|1735494_1736277_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
SPR39775.1|1736461_1737412_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39777.1|1737510_1738248_-	membrane protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
SPR39779.1|1738437_1739196_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SPR39781.1|1739242_1740232_-	exported protein	NA	NA	NA	NA	NA
SPR39783.1|1740409_1741378_-	exported protein	NA	NA	NA	NA	NA
SPR39785.1|1742409_1742862_+	formylglycine-generating enzyme family protein	NA	NA	NA	NA	NA
SPR39787.1|1742917_1743886_+	regulatory protein	NA	NA	NA	NA	NA
SPR39789.1|1743894_1744836_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39791.1|1744832_1746320_+	von Willebrand factor type A domain protein	NA	NA	NA	NA	NA
SPR39793.1|1746310_1747825_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39795.1|1747821_1749168_+	exported protein	NA	NA	NA	NA	NA
SPR39797.1|1749170_1750205_+	nonspecific acid phosphatase	NA	NA	NA	NA	NA
SPR39799.1|1750254_1751880_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
SPR39801.1|1752432_1753383_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39802.1|1753487_1754435_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39804.1|1754488_1756303_-	two component system sensor histidine kinase	NA	NA	NA	NA	NA
SPR39806.1|1756295_1756970_-	response regulator protein	NA	NA	NA	NA	NA
SPR39808.1|1757099_1760174_+	autotransporter	NA	NA	NA	NA	NA
SPR39810.1|1760187_1760487_-	putative DNA-binding protein	NA	NA	NA	NA	NA
SPR39812.1|1760489_1760660_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39813.1|1760801_1761425_-	glutathione S-transferase	NA	NA	NA	NA	NA
SPR39815.1|1761668_1762538_+	alpha-ketoglutarate-dependent 24-dichlorophenoxyacetate dioxygenase	NA	NA	NA	NA	NA
SPR39817.1|1762515_1763460_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39819.1|1763545_1764517_-	exported protein	NA	NA	NA	NA	NA
SPR39821.1|1764584_1765358_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
SPR39823.1|1765354_1766551_-	lactate dehydrogenase	NA	NA	NA	NA	NA
SPR39825.1|1766581_1767532_-	hydrolase	NA	NA	NA	NA	NA
SPR39827.1|1767753_1768443_+	short chain dehydrogenase	NA	NA	NA	NA	NA
SPR39829.1|1768507_1769263_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
SPR39830.1|1769314_1770307_+	exported protein	NA	NA	NA	NA	NA
SPR39832.1|1770316_1771270_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39833.1|1771385_1772348_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR39835.1|1772362_1773556_+	partial	NA	NA	NA	NA	NA
SPR39837.1|1773749_1774178_+	LamB/YcsF domain protein	NA	NA	NA	NA	NA
SPR39839.1|1774174_1775125_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39840.1|1775233_1775422_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39842.1|1775418_1776156_-	NADPH-dependent FMN reductase	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
SPR39844.1|1776133_1776406_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	71.1	1.9e-28
SPR39845.1|1776579_1777767_-	membrane protein	NA	NA	NA	NA	NA
SPR39847.1|1777770_1778121_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR39849.1|1778354_1779767_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39851.1|1779870_1780842_+	exported protein	NA	NA	NA	NA	NA
SPR39853.1|1780855_1781569_+	short chain dehydrogenase	NA	NA	NA	NA	NA
SPR39855.1|1781573_1782476_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR39857.1|1782597_1782894_+	putative membrane protein	NA	NA	NA	NA	NA
SPR39859.1|1782992_1783943_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 15
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1828488	1879001	4144451	protease,transposase,tRNA	Bacillus_phage(16.67%)	43	NA	NA
SPR39934.1|1828488_1829439_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39936.1|1829587_1829926_-	putative exported protein	NA	NA	NA	NA	NA
SPR39938.1|1829983_1830145_-	putative membrane protein	NA	NA	NA	NA	NA
SPR39940.1|1830176_1830377_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR39942.1|1830642_1833216_-	cyanophycin synthetase	NA	NA	NA	NA	NA
SPR39944.1|1833286_1835836_-	cyanophycin synthetase	NA	NA	NA	NA	NA
SPR39946.1|1836100_1836316_+	putative ABC transporter	NA	NA	NA	NA	NA
SPR39948.1|1836617_1838390_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	32.4	5.7e-57
SPR39950.1|1838386_1838875_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39951.1|1838966_1840097_-	hypothetical protein	NA	NA	NA	NA	NA
SPR39953.1|1840102_1840993_+	exported protein	NA	NA	NA	NA	NA
SPR39955.1|1841031_1842261_+	peptidoglycan-binding protein	NA	NA	NA	NA	NA
SPR39957.1|1842389_1842830_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39959.1|1842940_1843891_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39960.1|1843887_1844361_-	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
SPR39962.1|1844522_1845461_+	membrane protein	NA	NA	NA	NA	NA
SPR39964.1|1845462_1846671_-	bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
SPR39965.1|1846775_1847282_-	lipoprotein signal peptidase	NA	NA	NA	NA	NA
SPR39966.1|1847284_1850146_-|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
SPR39968.1|1850135_1851101_-	bifunctional riboflavin kinase/FMN adenylyltransferase	NA	NA	NA	NA	NA
SPR39970.1|1851160_1853155_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
SPR39971.1|1853253_1854204_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR39973.1|1854200_1854575_-	exported protein	NA	NA	NA	NA	NA
SPR39975.1|1854836_1856045_+	fatty acid desaturase	NA	NA	NA	NA	NA
SPR39977.1|1856041_1858342_+	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
SPR39979.1|1858394_1861007_-	exported protein	NA	NA	NA	NA	NA
SPR39980.1|1861366_1863274_-	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
SPR39983.1|1863288_1864185_-	50S ribosomal protein L3 glutamine methyltransferase	NA	NA	NA	NA	NA
SPR39985.1|1864191_1865331_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
SPR39986.1|1865330_1866152_-	2345-tetrahydropyridine-26-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
SPR39988.1|1866177_1866900_-	N-succinyl-LL-diaminopimelate aminotransferase	NA	NA	NA	NA	NA
SPR39990.1|1867722_1868052_-	exported protein	NA	NA	NA	NA	NA
SPR39992.1|1868434_1869691_+	autotransporter	NA	NA	NA	NA	NA
SPR39994.1|1869765_1870047_+	putative membrane protein	NA	NA	NA	NA	NA
SPR39995.1|1870088_1870409_+	hypothetical protein	NA	NA	NA	NA	NA
SPR39997.1|1870715_1870919_+	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
SPR39999.1|1871002_1871569_+	DUF924 domain-containing protein	NA	NA	NA	NA	NA
SPR40000.1|1871914_1872115_+	cold shock-like protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
SPR40001.1|1872226_1872787_-	hypothetical protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
SPR40003.1|1872983_1874294_+	trigger factor	NA	NA	NA	NA	NA
SPR40005.1|1874296_1874950_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
SPR40007.1|1875054_1876359_+|protease	ATP-dependent Clp protease ATP-binding protein	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
SPR40009.1|1876547_1879001_+|protease	Lon protease	protease	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
>prophage 16
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	1891309	1946738	4144451	transposase,tRNA	uncultured_Caudovirales_phage(16.67%)	52	NA	NA
SPR40033.1|1891309_1892260_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40035.1|1892514_1893591_+	autotransporter	NA	NA	NA	NA	NA
SPR40036.1|1893817_1894468_-	LexA repressor	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
SPR40038.1|1894596_1895799_-	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
SPR40039.1|1895876_1897913_+	excinuclease ABC subunit B	NA	NA	NA	NA	NA
SPR40040.1|1898165_1898657_+	low molecular weight protein-tyrosine-phosphatase	NA	NA	NA	NA	NA
SPR40041.1|1898872_1899385_+	putative DNA-binding protein	NA	NA	NA	NA	NA
SPR40043.1|1899402_1900614_+	cysteine desulfurase	NA	NA	NA	NA	NA
SPR40044.1|1900651_1901062_+	[Fe-S] cluster formation/repair protein	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
SPR40045.1|1901063_1901387_+	[Fe-S] cluster formation/repair protein	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
SPR40046.1|1901389_1901902_+	co-chaperone protein HscB	NA	NA	NA	NA	NA
SPR40047.1|1902031_1903894_+	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
SPR40048.1|1903903_1904245_+	ferredoxin 2Fe-2S	NA	NA	NA	NA	NA
SPR40049.1|1904244_1904439_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40050.1|1904563_1905457_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40051.1|1905453_1906404_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40052.1|1906528_1907338_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
SPR40053.1|1907538_1908489_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40054.1|1908767_1909028_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40055.1|1909762_1910980_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40056.1|1910976_1912032_+	pyridoxal phosphate biosynthetic protein	NA	NA	NA	NA	NA
SPR40057.1|1912036_1912939_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR40058.1|1913015_1913888_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40059.1|1914018_1914387_+	aspartate 1-decarboxylase	NA	NA	NA	NA	NA
SPR40060.1|1914444_1915491_+	CDP-6-deoxy-L-threo-D-glycero-4-hexulose-3-dehy drase reductase	NA	NA	NA	NA	NA
SPR40061.1|1915686_1916943_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA	NA
SPR40062.1|1916947_1918285_+	glycerol-3-phosphate-binding periplasmic protein precursor	NA	NA	NA	NA	NA
SPR40063.1|1918434_1919391_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR40064.1|1920854_1921214_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40065.1|1921261_1922836_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR40066.1|1922888_1923833_+	ABC transporter permease	NA	NA	NA	NA	NA
SPR40067.1|1923850_1924681_+	binding-protein-dependent transport system inner membrane protein	NA	NA	NA	NA	NA
SPR40068.1|1924673_1926308_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	8.2e-18
SPR40069.1|1926304_1927660_+	amidase	NA	NA	NA	NA	NA
SPR40070.1|1927837_1928419_+	type IV secretion system protein PtlF domain protein	NA	NA	NA	NA	NA
SPR40071.1|1928566_1930144_+	lipoprotein	NA	NA	NA	NA	NA
SPR40072.1|1930147_1931422_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40073.1|1931396_1931894_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40075.1|1931890_1934743_+	type II/IV secretion system domain protein	NA	NA	NA	NA	NA
SPR40076.1|1934780_1935386_+	fimbrial protein	NA	NA	NA	NA	NA
SPR40077.1|1935382_1936201_+	exported protein	NA	NA	NA	NA	NA
SPR40078.1|1936272_1938897_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
SPR40079.1|1938883_1939138_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40080.1|1939306_1940257_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40081.1|1940253_1940835_-	exported protein	NA	NA	NA	NA	NA
SPR40082.1|1941138_1941399_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
SPR40083.1|1941564_1942188_+	ribosome maturation factor	NA	NA	NA	NA	NA
SPR40084.1|1942187_1942961_+|tRNA	tRNA (guanine-N(1)-)-methyltransferase	tRNA	NA	NA	NA	NA
SPR40085.1|1942957_1944166_-	class-V aminotransferase	NA	NA	NA	NA	NA
SPR40086.1|1944191_1944665_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40087.1|1944738_1945689_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40088.1|1945787_1946738_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 17
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2015683	2068937	4144451	transposase	Mycobacterium_phage(25.0%)	52	NA	NA
SPR40167.1|2015683_2016634_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40169.1|2016732_2017140_-	N-acetyltransferase	NA	NA	NA	NA	NA
SPR40170.1|2017286_2018237_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40172.1|2018255_2018603_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40174.1|2018631_2020071_-	transmembrane efflux protein	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
SPR40175.1|2020089_2020485_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40177.1|2020659_2021268_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40179.1|2021280_2022099_+	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
SPR40181.1|2022050_2023025_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
SPR40182.1|2023053_2024100_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40184.1|2024111_2026328_-	exported oxidoreductase subunit	NA	NA	NA	NA	NA
SPR40185.1|2026341_2026800_-	oxidoreductase subunit	NA	NA	NA	NA	NA
SPR40187.1|2026957_2027302_-	exported protein	NA	NA	NA	NA	NA
SPR40189.1|2027458_2028364_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR40191.1|2028486_2029464_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40192.1|2029471_2030395_-	3-deoxy-7-phosphoheptulonate synthase	NA	A0A0B6VT43	Edwardsiella_phage	50.2	8.0e-79
SPR40194.1|2031530_2032460_+	IS110 family	NA	NA	NA	NA	NA
SPR40196.1|2032602_2033955_-	glutathione reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
SPR40198.1|2034129_2034426_+	putative membrane protein	NA	NA	NA	NA	NA
SPR40199.1|2034524_2035475_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40201.1|2035799_2036783_-	Crp/Fnr family transcriptional regulator	NA	NA	NA	NA	NA
SPR40202.1|2036821_2037793_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR40204.1|2037796_2038651_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40205.1|2038669_2039491_+	hydrolase	NA	NA	NA	NA	NA
SPR40207.1|2039522_2040317_+	amidase	NA	NA	NA	NA	NA
SPR40208.1|2040928_2041762_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SPR40210.1|2042047_2043553_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40212.1|2043594_2044377_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
SPR40213.1|2044446_2044893_-	membrane protein	NA	NA	NA	NA	NA
SPR40214.1|2044889_2046116_-	membrane protein	NA	NA	NA	NA	NA
SPR40215.1|2046108_2046513_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40216.1|2046672_2046975_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40217.1|2046971_2047922_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40218.1|2048143_2049094_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40220.1|2049514_2050141_-	partial	NA	NA	NA	NA	NA
SPR40222.1|2050239_2051205_-	exported protein	NA	NA	NA	NA	NA
SPR40224.1|2051342_2052155_-	putative lysR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR40225.1|2052778_2054602_+	DUF3604 domain-containing protein	NA	NA	NA	NA	NA
SPR40227.1|2054959_2056330_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40229.1|2056340_2057537_+	thiolase	NA	NA	NA	NA	NA
SPR40231.1|2057609_2058929_+	acyl-CoA ligase	NA	NA	NA	NA	NA
SPR40232.1|2058925_2059801_+	esterase	NA	NA	NA	NA	NA
SPR40234.1|2059831_2060980_-	fatty-acyl-CoA racemase	NA	NA	NA	NA	NA
SPR40236.1|2060997_2061312_-	ferredoxin	NA	NA	NA	NA	NA
SPR40237.1|2061333_2062056_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
SPR40239.1|2062055_2062868_-	enoyl-CoA hydratase/isomerase-like protein	NA	NA	NA	NA	NA
SPR40241.1|2062878_2063406_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40242.1|2063411_2064668_-	dioxygenase hydroxylase large subunit	NA	NA	NA	NA	NA
SPR40243.1|2065026_2066166_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR40244.1|2066243_2067116_+	ABC transporter permease	NA	NA	NA	NA	NA
SPR40245.1|2067119_2067905_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR40246.1|2067986_2068937_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 18
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2103719	2148101	4144451	transposase,tRNA	uncultured_Caudovirales_phage(25.0%)	39	NA	NA
SPR40304.1|2103719_2104670_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40306.1|2104768_2105719_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40308.1|2105800_2107075_-	cyclopropane-fatty-acyl-phospholipid synthase	NA	NA	NA	NA	NA
SPR40309.1|2107261_2108434_+	transmembrane transport protein	NA	NA	NA	NA	NA
SPR40311.1|2108802_2109039_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
SPR40313.1|2109102_2109270_+	50S ribosomal protein L33	NA	NA	NA	NA	NA
SPR40315.1|2109383_2111189_-	sulfate transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.2e-19
SPR40317.1|2111442_2112393_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40319.1|2112669_2113107_+	DNA-binding protein Bph2	NA	NA	NA	NA	NA
SPR40320.1|2113229_2113742_+	putative MarR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR40321.1|2113738_2114941_+	transmembrane transport protein	NA	NA	NA	NA	NA
SPR40322.1|2115018_2117676_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
SPR40323.1|2117691_2118351_+	putative lipoprotein	NA	NA	NA	NA	NA
SPR40324.1|2118353_2119409_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
SPR40325.1|2119530_2120790_+	gamma-glutamyl phosphate reductase	NA	A0A1X9I5D4	Streptococcus_phage	45.7	1.1e-91
SPR40326.1|2120786_2121182_+	putative membrane protein	NA	NA	NA	NA	NA
SPR40327.1|2121204_2122599_-	amidase	NA	NA	NA	NA	NA
SPR40328.1|2122780_2123728_+	hydroxlacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR40329.1|2123724_2123997_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40331.1|2124226_2124505_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40332.1|2131058_2131307_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40333.1|2131395_2132358_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR40334.1|2132913_2133540_+	partial	NA	NA	NA	NA	NA
SPR40336.1|2133589_2135107_-	acyl-CoA transferase	NA	NA	NA	NA	NA
SPR40338.1|2135332_2136244_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR40340.1|2136388_2136619_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40341.1|2136605_2137556_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40342.1|2137623_2138073_-	putative exported protein	NA	NA	NA	NA	NA
SPR40343.1|2138458_2139229_-	integral membrane protein	NA	NA	NA	NA	NA
SPR40344.1|2139232_2140135_-	integral membrane protein	NA	NA	NA	NA	NA
SPR40345.1|2140203_2140503_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40346.1|2140638_2140929_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
SPR40347.1|2140935_2141322_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR40348.1|2141334_2141958_-	exonuclease	NA	A0A2K9V2V7	Faecalibacterium_phage	31.8	3.6e-06
SPR40349.1|2142144_2144736_+	aconitate hydratase B	NA	NA	NA	NA	NA
SPR40350.1|2145130_2145469_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40351.1|2145471_2146020_+	lipoprotein	NA	NA	NA	NA	NA
SPR40352.1|2146101_2147052_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40353.1|2147150_2148101_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 19
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2322533	2363347	4144451	transposase,tRNA	Yellowstone_lake_phycodnavirus(16.67%)	39	NA	NA
SPR40616.1|2322533_2322986_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40618.1|2323215_2323716_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40619.1|2323702_2324653_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40621.1|2324751_2325702_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40623.1|2325818_2326538_+	GntR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR40624.1|2326710_2327697_+	exported protein	NA	NA	NA	NA	NA
SPR40627.1|2327697_2328180_+	membrane protein	NA	NA	NA	NA	NA
SPR40629.1|2328183_2329467_+	membrane protein	NA	NA	NA	NA	NA
SPR40631.1|2329463_2330402_+	citrate lyase subunit beta	NA	NA	NA	NA	NA
SPR40633.1|2330398_2332108_+	acetolactate synthase large subunit	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
SPR40635.1|2332117_2333365_+	N-carbamoyl-L-amino acid amidohydrolase	NA	NA	NA	NA	NA
SPR40637.1|2333414_2335034_+	aldehyde dehydrogenase	NA	NA	NA	NA	NA
SPR40639.1|2334975_2336265_-	glutamate dehydrogenase	NA	NA	NA	NA	NA
SPR40641.1|2336457_2337201_-	formimidoylglutamase	NA	NA	NA	NA	NA
SPR40642.1|2337402_2338176_-	glutamine transport ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
SPR40644.1|2338445_2338841_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR40646.1|2338837_2339581_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR40648.1|2339655_2340396_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR40650.1|2340591_2341428_-	exported protein	NA	NA	NA	NA	NA
SPR40651.1|2341478_2342249_-	hypothetical protein	NA	NA	NA	NA	NA
SPR40653.1|2342298_2343351_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
SPR40655.1|2343347_2343974_-	thymidylate kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
SPR40657.1|2343970_2345005_-	exported protein	NA	NA	NA	NA	NA
SPR40658.1|2345183_2346200_+	hypothetical protein	NA	NA	NA	NA	NA
SPR40660.1|2346298_2347249_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40662.1|2347383_2349165_+	error-prone DNA polymerase	NA	A0A2H4P750	Pseudomonas_phage	30.0	4.6e-54
SPR40664.1|2349207_2349924_+	error-prone DNA polymerase	NA	NA	NA	NA	NA
SPR40665.1|2349989_2351279_-	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA	NA
SPR40667.1|2351397_2351835_-	DNA-binding protein	NA	NA	NA	NA	NA
SPR40669.1|2351878_2353087_-	nitric oxide dioxygenase	NA	NA	NA	NA	NA
SPR40671.1|2353233_2353698_+|tRNA	aspartyl-tRNA amidotransferase subunit B	tRNA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
SPR40673.1|2353721_2354672_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR40674.1|2354770_2355331_-	L-24-diaminobutyric acid acetyltransferase	NA	NA	NA	NA	NA
SPR40676.1|2355327_2355873_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
SPR40678.1|2356068_2357097_+	SIS family regulator	NA	NA	NA	NA	NA
SPR40680.1|2357137_2358478_+	aminotransferase	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
SPR40682.1|2358586_2359591_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR40684.1|2359697_2362298_+	inner membrane protein	NA	NA	NA	NA	NA
SPR40687.1|2362396_2363347_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 20
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2610973	2664554	4144451	protease,transposase,tRNA	Salmonella_phage(22.22%)	51	NA	NA
SPR41129.1|2610973_2611924_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41130.1|2612022_2612805_-	putative oxidoreductase	NA	NA	NA	NA	NA
SPR41132.1|2612893_2614120_-	transporter	NA	NA	NA	NA	NA
SPR41134.1|2614845_2616231_+	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
SPR41136.1|2616249_2616855_+	alcaligin biosynthesis protein	NA	NA	NA	NA	NA
SPR41138.1|2616851_2618708_+	alcaligin biosynthesis protein	NA	NA	NA	NA	NA
SPR41140.1|2618704_2619505_+	siderophore ferric iron reductase	NA	NA	NA	NA	NA
SPR41142.1|2619519_2620713_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
SPR41143.1|2620843_2621755_+	transcriptional regulator	NA	NA	NA	NA	NA
SPR41145.1|2621877_2623101_+	drug resistance translocase	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
SPR41147.1|2623211_2625416_+	ferric alcaligin siderophore receptor	NA	NA	NA	NA	NA
SPR41149.1|2625710_2626370_+	antibiotic resistance protein	NA	NA	NA	NA	NA
SPR41151.1|2626377_2626584_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41153.1|2626922_2627678_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
SPR41155.1|2627693_2627948_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41157.1|2627948_2628464_+	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
SPR41159.1|2628736_2629054_+	Virulence protein	NA	NA	NA	NA	NA
SPR41161.1|2629123_2629276_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41163.1|2629241_2629490_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41165.1|2629768_2631124_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
SPR41167.1|2631170_2632511_-	recombination factor protein RarA	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
SPR41169.1|2632612_2633245_-	outer-membrane lipoprotein carrier protein	NA	NA	NA	NA	NA
SPR41171.1|2633244_2635605_-	cell division protein	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
SPR41173.1|2635646_2636606_+	thioredoxin reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
SPR41175.1|2636592_2637279_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41177.1|2637275_2637608_+	mebrane transport protein	NA	NA	NA	NA	NA
SPR41179.1|2637723_2638674_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41180.1|2638772_2639294_+	partial	NA	NA	NA	NA	NA
SPR41182.1|2639280_2639721_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41184.1|2639717_2641784_-	membrane transport protein	NA	NA	NA	NA	NA
SPR41186.1|2641783_2642056_-	putative integral membrane protein	NA	NA	NA	NA	NA
SPR41188.1|2642655_2642754_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41190.1|2642750_2642840_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41192.1|2642839_2644624_+	potassium-transporting ATPase subunit A	NA	NA	NA	NA	NA
SPR41194.1|2644647_2646813_+	potassium-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
SPR41196.1|2646829_2647423_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
SPR41198.1|2647488_2650203_+	two component system sensor histidine kinase	NA	NA	NA	NA	NA
SPR41200.1|2650244_2650940_+	two-component system response regulator KdpE	NA	NA	NA	NA	NA
SPR41202.1|2650948_2651899_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41204.1|2651997_2653239_-	exported protein	NA	NA	NA	NA	NA
SPR41206.1|2653388_2654369_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41208.1|2654567_2655824_-	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
SPR41210.1|2656026_2656452_+	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
SPR41212.1|2656493_2656856_-	putative cytochrome	NA	NA	NA	NA	NA
SPR41214.1|2656868_2657222_-	putative cytochrome	NA	NA	NA	NA	NA
SPR41216.1|2657388_2658339_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41218.1|2658431_2659319_+	MoxR family ATPase	NA	NA	NA	NA	NA
SPR41220.1|2659340_2660513_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41222.1|2660516_2661059_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41224.1|2661096_2661471_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41226.1|2661803_2664554_+|protease	zinc protease	protease	A0A2K9LA15	Tupanvirus	28.1	1.5e-19
>prophage 21
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2738016	2778685	4144451	transposase,tRNA	Salmonella_phage(33.33%)	41	NA	NA
SPR41309.1|2738016_2738967_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41310.1|2739077_2739260_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41311.1|2739359_2739953_-	lipoprotein	NA	NA	NA	NA	NA
SPR41312.1|2740139_2741231_+	exported protein	NA	NA	NA	NA	NA
SPR41313.1|2741730_2742141_-	putative MerR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR41314.1|2742199_2742529_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
SPR41315.1|2742546_2744964_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
SPR41316.1|2744976_2745999_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
SPR41317.1|2746073_2746433_-	50s ribosomal protein	NA	NA	NA	NA	NA
SPR41318.1|2746448_2746646_-	50s ribosomal protein l35	NA	NA	NA	NA	NA
SPR41319.1|2746981_2747932_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41320.1|2748126_2748576_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
SPR41321.1|2748572_2749523_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41322.1|2749633_2751082_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41323.1|2751196_2751442_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41324.1|2751581_2752532_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41325.1|2752776_2753490_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41326.1|2754134_2754773_-	DedA family integral membrane protein	NA	NA	NA	NA	NA
SPR41328.1|2754881_2755916_+	integral membrane protein	NA	NA	NA	NA	NA
SPR41329.1|2755912_2756863_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41330.1|2756880_2757270_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41331.1|2757278_2757803_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
SPR41332.1|2757806_2758076_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41333.1|2758274_2759336_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
SPR41334.1|2759419_2761054_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
SPR41335.1|2761055_2761910_-	ABC transporter permease	NA	NA	NA	NA	NA
SPR41336.1|2761887_2762847_-	ABC transporter permease	NA	NA	NA	NA	NA
SPR41337.1|2762850_2764362_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR41338.1|2764401_2765457_-	partial	NA	NA	NA	NA	NA
SPR41339.1|2765837_2766308_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41340.1|2766343_2766955_-	membrane transport protein	NA	NA	NA	NA	NA
SPR41341.1|2766985_2767609_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41342.1|2767689_2769222_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41343.1|2769256_2770474_-	membrane protein	NA	NA	NA	NA	NA
SPR41344.1|2770541_2771573_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
SPR41345.1|2771569_2772739_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41346.1|2772732_2773413_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41347.1|2773574_2774417_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41348.1|2774579_2775551_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
SPR41349.1|2776623_2777694_-	FUSC family protein	NA	NA	NA	NA	NA
SPR41350.1|2777734_2778685_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 22
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2839209	2889808	4144451	transposase	Moraxella_phage(16.67%)	39	NA	NA
SPR41411.1|2839209_2840160_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41413.1|2840156_2847818_-	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
SPR41415.1|2848058_2852105_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
SPR41417.1|2852462_2852999_+	integral membrane protein	NA	NA	NA	NA	NA
SPR41419.1|2852995_2854294_+	membrane permease	NA	NA	NA	NA	NA
SPR41421.1|2854373_2855402_+	exported protein	NA	NA	NA	NA	NA
SPR41423.1|2855662_2856613_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41424.1|2856609_2857560_-|transposase	transposase for IS1002	transposase	NA	NA	NA	NA
SPR41426.1|2857876_2858482_+	fimbrial protein	NA	NA	NA	NA	NA
SPR41428.1|2858535_2859849_-	phenylacetate-coenzyme A ligase	NA	NA	NA	NA	NA
SPR41430.1|2859923_2860394_-	phenylacetic acid degradation protein	NA	NA	NA	NA	NA
SPR41432.1|2860393_2861182_-	2-(12-epoxy-12-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
SPR41434.1|2861192_2862845_-	oxidoreductase	NA	NA	NA	NA	NA
SPR41435.1|2862932_2863883_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41437.1|2863869_2865033_-	PaaK subunit	NA	V5UTY8	Synechococcus_phage	46.7	5.9e-10
SPR41439.1|2865044_2865551_-	phenylacetic acid degradation protein	NA	NA	NA	NA	NA
SPR41441.1|2865547_2866312_-	phenylacetic acid degradation protein	NA	NA	NA	NA	NA
SPR41443.1|2866327_2866612_-	phenylacetate-CoA oxygenase subunit PaaB	NA	NA	NA	NA	NA
SPR41444.1|2866676_2867666_-	12-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
SPR41446.1|2867837_2868767_+	phenylacetic acid degradation operon negative regulatory protein	NA	NA	NA	NA	NA
SPR41448.1|2868738_2869425_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
SPR41450.1|2869458_2870004_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
SPR41452.1|2870048_2871314_+	peptidase M48	NA	NA	NA	NA	NA
SPR41453.1|2871310_2872213_+	putative ATP/GTP-binding protein	NA	NA	NA	NA	NA
SPR41455.1|2872510_2873398_-	ABC transporter permease	NA	NA	NA	NA	NA
SPR41457.1|2873394_2874339_-	ABC transporter permease	NA	NA	NA	NA	NA
SPR41459.1|2874433_2875951_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR41461.1|2875992_2877621_-	gamma-glutamyltranspeptidase	NA	NA	NA	NA	NA
SPR41462.1|2877728_2878610_+	LysR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR41464.1|2879689_2881147_-	DUF839 domain-containing protein	NA	NA	NA	NA	NA
SPR41466.1|2881263_2881608_-	partial	NA	NA	NA	NA	NA
SPR41468.1|2881722_2882097_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
SPR41470.1|2882093_2883044_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41472.1|2883170_2883509_-	nitrogen regulatory protein	NA	NA	NA	NA	NA
SPR41473.1|2883552_2885187_-	NAD synthetase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
SPR41475.1|2885225_2886572_-	putative membrane transport protein	NA	NA	NA	NA	NA
SPR41477.1|2886679_2888101_+	argininosuccinate lyase	NA	NA	NA	NA	NA
SPR41479.1|2888170_2888755_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41480.1|2888857_2889808_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 23
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2910163	2960824	4144451	protease,transposase	uncultured_Mediterranean_phage(33.33%)	37	NA	NA
SPR41515.1|2910163_2911114_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41517.1|2911110_2911905_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41518.1|2911936_2912641_-	oxidoreductase	NA	NA	NA	NA	NA
SPR41520.1|2912715_2913516_-	SurF1-family protein	NA	NA	NA	NA	NA
SPR41521.1|2913512_2913920_-	cytochrome ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
SPR41523.1|2913916_2914558_-	cytochrome ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
SPR41525.1|2914550_2916572_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
SPR41526.1|2916608_2917100_-	partial	NA	NA	NA	NA	NA
SPR41528.1|2917811_2919143_+	membrane transport protein	NA	NA	NA	NA	NA
SPR41530.1|2919139_2920090_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41532.1|2920643_2921690_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
SPR41533.1|2921796_2922063_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41535.1|2922770_2923109_+	nitrogen regulatory protein P-II	NA	NA	NA	NA	NA
SPR41537.1|2923134_2923860_+	ammonium transporter	NA	NA	NA	NA	NA
SPR41539.1|2924437_2926558_-	autotransporter BapC	NA	NA	NA	NA	NA
SPR41541.1|2927661_2928264_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41543.1|2928360_2929650_+	membrane transport protein	NA	NA	NA	NA	NA
SPR41545.1|2929707_2930439_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
SPR41547.1|2930435_2931239_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
SPR41549.1|2931235_2932324_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
SPR41551.1|2932320_2933250_-	ABC transporter permease	NA	NA	NA	NA	NA
SPR41553.1|2933398_2934544_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR41555.1|2934565_2935516_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41557.1|2935846_2939668_-	trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase	NA	NA	NA	NA	NA
SPR41559.1|2939824_2940493_-	lipoprotein	NA	NA	NA	NA	NA
SPR41560.1|2940497_2942171_-	membrane protein	NA	NA	NA	NA	NA
SPR41562.1|2942189_2943386_-	exported protein	NA	NA	NA	NA	NA
SPR41564.1|2943513_2945829_-|protease	ATP-dependent Clp protease ATP-binding protein	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
SPR41566.1|2945884_2948053_-	penicillin-binding protein	NA	NA	NA	NA	NA
SPR41568.1|2948049_2953230_-	exported protein	NA	NA	NA	NA	NA
SPR41570.1|2953328_2953643_-|protease	ATP-dependent Clp protease adaptor protein ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
SPR41572.1|2953870_2954116_+	putative cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
SPR41574.1|2954237_2954729_+	exported protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	4.8e-14
SPR41575.1|2954828_2956034_-	beta-ketoadipyl CoA thiolase	NA	NA	NA	NA	NA
SPR41577.1|2956149_2957547_-	putative chloride-channel protein	NA	NA	NA	NA	NA
SPR41579.1|2957663_2958242_-	superoxide dismutase	NA	NA	NA	NA	NA
SPR41581.1|2959873_2960824_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 24
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	2970470	3088430	4144451	transposase,tRNA	Staphylococcus_phage(20.0%)	117	NA	NA
SPR41604.1|2970470_2971421_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41606.1|2971417_2971969_-	partial	NA	NA	NA	NA	NA
SPR41608.1|2972796_2973756_-	partial	NA	NA	NA	NA	NA
SPR41610.1|2973804_2974917_-	malate dehydrogenase	NA	NA	NA	NA	NA
SPR41612.1|2974973_2975924_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41614.1|2976132_2976354_-	lipoprotein	NA	NA	NA	NA	NA
SPR41616.1|2976567_2977974_-	threonine synthase	NA	NA	NA	NA	NA
SPR41618.1|2977970_2979275_-	homoserine dehydrogenase	NA	NA	NA	NA	NA
SPR41620.1|2979271_2980459_-	aminotransferase	NA	NA	NA	NA	NA
SPR41622.1|2980675_2981128_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41623.1|2981130_2981595_+	peroxiredoxin	NA	NA	NA	NA	NA
SPR41626.1|2981674_2983354_+	phosphate starvation protein PhoH	NA	A0A2I7SAD7	Vibrio_phage	36.7	7.3e-70
SPR41628.1|2983458_2984436_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
SPR41629.1|2984515_2985484_+	exported protein	NA	NA	NA	NA	NA
SPR41632.1|2985504_2986878_-	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	58.2	4.0e-135
SPR41634.1|2986874_2987711_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41636.1|2987827_2988283_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
SPR41638.1|2988298_2988571_-	30s ribosomal protein s18	NA	NA	NA	NA	NA
SPR41640.1|2988663_2988912_-	primosomal replication protein n	NA	NA	NA	NA	NA
SPR41641.1|2989034_2989415_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
SPR41643.1|2989634_2990432_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41645.1|2990588_2992451_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
SPR41647.1|2992500_2993412_-	geranyltranstransferase	NA	NA	NA	NA	NA
SPR41649.1|2993416_2993683_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
SPR41651.1|2993769_2994639_-	transcriptional regulator	NA	NA	NA	NA	NA
SPR41652.1|2994774_2995740_+	exported protein	NA	NA	NA	NA	NA
SPR41654.1|2995910_2996921_+	membrane protein	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	24.6	3.6e-16
SPR41656.1|2997068_2998220_+	iron-sulfur protein	NA	NA	NA	NA	NA
SPR41658.1|2998303_2999167_-	IS481 family	NA	NA	NA	NA	NA
SPR41660.1|2999362_3000835_-	cation transport protein	NA	NA	NA	NA	NA
SPR41661.1|3000845_3001256_-	putative thioesterase	NA	NA	NA	NA	NA
SPR41663.1|3001319_3002366_-	putative integral membrane protein	NA	NA	NA	NA	NA
SPR41665.1|3002472_3003351_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41667.1|3003364_3004561_-	hydrolase	NA	NA	NA	NA	NA
SPR41669.1|3004637_3006314_+	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	28.1	9.3e-33
SPR41671.1|3006310_3007261_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41672.1|3007381_3008278_-	inositol monophosphatase	NA	NA	NA	NA	NA
SPR41674.1|3008435_3009623_+|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34)oxidoreductase MnmC	tRNA	NA	NA	NA	NA
SPR41676.1|3009568_3010261_+|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34)oxidoreductase MnmC	tRNA	NA	NA	NA	NA
SPR41677.1|3010555_3012781_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41679.1|3012945_3014034_+	ABC transport protein ATP-binding component	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
SPR41681.1|3013990_3014644_+	ABC transporter permease	NA	NA	NA	NA	NA
SPR41683.1|3014691_3015489_+	lipoprotein	NA	NA	NA	NA	NA
SPR41684.1|3016020_3017079_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41686.1|3017065_3018304_+	IS481 family	NA	NA	NA	NA	NA
SPR41688.1|3018348_3019608_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR41689.1|3019614_3020367_+	DNA-binding protein	NA	NA	NA	NA	NA
SPR41690.1|3020418_3020604_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41691.1|3020762_3021344_+	putative MerR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR41692.1|3021423_3022035_+	hydrolase	NA	NA	NA	NA	NA
SPR41693.1|3022179_3024288_+	exported protein	NA	NA	NA	NA	NA
SPR41694.1|3024284_3025235_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41696.1|3025338_3025902_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41698.1|3026062_3026803_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
SPR41700.1|3027120_3027744_+	IS3 family	NA	NA	NA	NA	NA
SPR41701.1|3028204_3028984_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41703.1|3028814_3029705_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41705.1|3029717_3030668_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41707.1|3030654_3031695_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41709.1|3031703_3032315_-	partial	NA	NA	NA	NA	NA
SPR41710.1|3032631_3033582_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41712.1|3033578_3034487_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41714.1|3034613_3035450_+	probable 3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
SPR41716.1|3035962_3037072_+	outer membrane porin protein	NA	NA	NA	NA	NA
SPR41717.1|3037133_3038084_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41719.1|3038276_3039059_-	short chain dehydrogenase	NA	NA	NA	NA	NA
SPR41721.1|3039072_3039822_-	short chain dehydrogenase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
SPR41722.1|3039849_3041196_-	membrane transport protein	NA	NA	NA	NA	NA
SPR41724.1|3041221_3042151_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41726.1|3042266_3043172_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41728.1|3043168_3044119_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41729.1|3044238_3045438_-	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
SPR41731.1|3045510_3046203_-	hypothetical protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
SPR41733.1|3046251_3048678_-	cation-transporting ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.2e-86
SPR41735.1|3048722_3049673_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41737.1|3049889_3050258_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41738.1|3050544_3051471_+	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41740.1|3051514_3052525_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
SPR41742.1|3052521_3052956_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41744.1|3053188_3054070_+	exported protein	NA	NA	NA	NA	NA
SPR41746.1|3054081_3054870_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	40.0	1.1e-33
SPR41748.1|3054879_3055662_+	ABC transporter permease	NA	NA	NA	NA	NA
SPR41749.1|3055665_3056757_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41751.1|3056862_3058338_+	acid CoA ligase	NA	Q75ZG1	Hepacivirus	25.6	3.0e-35
SPR41753.1|3058479_3059028_+	hypothetical protein	NA	NA	NA	NA	NA
SPR41754.1|3059043_3059505_-	putative AsnC-family transcriptional regulator	NA	NA	NA	NA	NA
SPR41756.1|3059605_3060595_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
SPR41758.1|3060893_3061595_+	riboflavin synthase subunit alpha	NA	NA	NA	NA	NA
SPR41760.1|3061633_3063007_-	amidase	NA	NA	NA	NA	NA
SPR41762.1|3064424_3065030_-	partial	NA	NA	NA	NA	NA
SPR41764.1|3065218_3066121_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41765.1|3066068_3067289_-	membrane transport protein	NA	NA	NA	NA	NA
SPR41767.1|3067285_3067795_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41769.1|3067784_3068456_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41771.1|3068550_3069420_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
SPR41773.1|3069769_3070720_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41775.1|3070710_3071562_-	putative NADH:flavin oxidoreductase	NA	NA	NA	NA	NA
SPR41777.1|3071580_3072279_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	28.7	3.8e-12
SPR41778.1|3072423_3073050_-	ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	40.7	6.2e-06
SPR41780.1|3073046_3074009_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR41782.1|3074012_3074873_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
SPR41784.1|3074866_3075259_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41786.1|3075289_3076462_-	acetyl-CoA synthetase	NA	A0A2H4PQU7	Staphylococcus_phage	39.6	1.1e-59
SPR41788.1|3076466_3077660_-	putative branched-chain amino acid-binding protein	NA	NA	NA	NA	NA
SPR41790.1|3077832_3078711_+	putative transcriptional regulator	NA	NA	NA	NA	NA
SPR41792.1|3078744_3079524_-	probable short chain dehydrogenase	NA	NA	NA	NA	NA
SPR41794.1|3079552_3080425_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR41796.1|3080446_3081196_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	33.5	6.2e-29
SPR41798.1|3081203_3082061_-	putative inner membrane component of binding-protein-dependent transport system	NA	NA	NA	NA	NA
SPR41800.1|3082101_3082665_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
SPR41802.1|3082695_3082992_-	putative exported protein	NA	NA	NA	NA	NA
SPR41803.1|3083072_3083876_-	putative enoyl-CoA hydratase	NA	NA	NA	NA	NA
SPR41805.1|3083896_3085093_-	CoA transferase	NA	NA	NA	NA	NA
SPR41807.1|3085095_3086037_-	amidase	NA	NA	NA	NA	NA
SPR41810.1|3086449_3086620_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41811.1|3086714_3087377_+	putative GntR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR41812.1|3087479_3088430_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 25
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	3223581	3296339	4144451	transposase,tRNA	Xanthomonas_phage(14.29%)	60	NA	NA
SPR41995.1|3223581_3224532_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR41996.1|3224540_3225089_+	lipid A palmitoyltransferase	NA	NA	NA	NA	NA
SPR41997.1|3225085_3225694_-	hypothetical protein	NA	NA	NA	NA	NA
SPR41998.1|3225876_3226335_-	glutamate uptake regulatory protein	NA	NA	NA	NA	NA
SPR41999.1|3226353_3227610_-	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA	NA
SPR42000.1|3227665_3228478_-	oxidoreductase	NA	NA	NA	NA	NA
SPR42001.1|3228592_3229147_+	cysteine dioxygenase	NA	NA	NA	NA	NA
SPR42002.1|3229156_3230146_-	membrane protein	NA	NA	NA	NA	NA
SPR42003.1|3230325_3231045_-	VOC family protein	NA	NA	NA	NA	NA
SPR42004.1|3231061_3233797_-	protein translocase subunit SecA	NA	NA	NA	NA	NA
SPR42005.1|3233976_3234963_-	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
SPR42007.1|3235091_3235499_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42008.1|3235610_3236534_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
SPR42009.1|3236762_3237947_-	cell division protein FtsZ	NA	NA	NA	NA	NA
SPR42010.1|3238135_3239362_-	cell division protein FtsA	NA	NA	NA	NA	NA
SPR42011.1|3239366_3240188_-	cell division protein FtsQ	NA	NA	NA	NA	NA
SPR42012.1|3240200_3241151_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
SPR42013.1|3241147_3242554_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
SPR42014.1|3242550_3243624_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA	NA
SPR42015.1|3243620_3244814_-	lipid II flippase FtsW	NA	NA	NA	NA	NA
SPR42016.1|3244810_3246343_-	UDP-N-acetylmuramoylalanine--D-glutamate ligase	NA	NA	NA	NA	NA
SPR42017.1|3246339_3247509_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
SPR42018.1|3247498_3250336_-	bifunctional UDP-N-acetylmuramoylalanyl-D-glutamate--2 6-diaminopimelate ligase/UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase	NA	NA	NA	NA	NA
SPR42019.1|3250332_3252063_-	peptidoglycan synthetase	NA	NA	NA	NA	NA
SPR42020.1|3252059_3252338_-	cell division protein FtsL	NA	NA	NA	NA	NA
SPR42021.1|3252337_3253432_-	S-adenosyl-methyltransferase	NA	NA	NA	NA	NA
SPR42022.1|3253440_3253791_-	cell division protein MraZ	NA	NA	NA	NA	NA
SPR42023.1|3254671_3256480_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
SPR42024.1|3256519_3257584_-	dihydroorotase	NA	NA	NA	NA	NA
SPR42025.1|3257595_3258789_-	hydrolase	NA	NA	NA	NA	NA
SPR42026.1|3258938_3259217_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42027.1|3259545_3259911_-	putative membrane protein	NA	NA	NA	NA	NA
SPR42028.1|3266660_3267122_-	leucine-responsive regulatory protein	NA	NA	NA	NA	NA
SPR42029.1|3267289_3268402_+	hemolysin	NA	NA	NA	NA	NA
SPR42030.1|3268469_3269030_-	methionine sulfoxide reductase A	NA	NA	NA	NA	NA
SPR42031.1|3269053_3269386_-	cytochrome C552 precursor	NA	NA	NA	NA	NA
SPR42032.1|3269369_3271058_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
SPR42033.1|3271177_3271966_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
SPR42034.1|3271940_3272513_-	DUF541 domain-containing protein	NA	NA	NA	NA	NA
SPR42035.1|3272673_3273624_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42036.1|3274068_3274380_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR42038.1|3274379_3274826_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42039.1|3275072_3276023_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42040.1|3276121_3277072_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42041.1|3277361_3277826_+	putative membrane protein	NA	NA	NA	NA	NA
SPR42042.1|3277840_3279346_+	membrane protein	NA	NA	NA	NA	NA
SPR42043.1|3279602_3281207_+	gamma-glutamyltranspeptidase	NA	NA	NA	NA	NA
SPR42044.1|3281334_3282168_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
SPR42045.1|3282216_3282570_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
SPR42046.1|3282608_3283559_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42047.1|3283697_3284450_+	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
SPR42048.1|3284724_3286413_+	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	1.6e-48
SPR42049.1|3286501_3287692_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42050.1|3287706_3288801_-|tRNA	tRNA CCA-pyrophosphorylase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
SPR42051.1|3288797_3290924_-	putative transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
SPR42052.1|3290936_3291617_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
SPR42054.1|3291852_3293268_+	integral membrane transport protein	NA	NA	NA	NA	NA
SPR42056.1|3293269_3294289_+	aminohydrolase	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
SPR42058.1|3294352_3295324_+	transcriptional regulator	NA	NA	NA	NA	NA
SPR42060.1|3295388_3296339_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 26
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	3316038	3357203	4144451	transposase,protease	Erwinia_phage(50.0%)	38	NA	NA
SPR42102.1|3316038_3316578_+|protease	ATP-dependent protease subunit HsIV	protease	NA	NA	NA	NA
SPR42104.1|3316599_3317934_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
SPR42106.1|3317947_3318253_-	RND transporter	NA	NA	NA	NA	NA
SPR42108.1|3318677_3319259_+	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
SPR42110.1|3319340_3320291_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42112.1|3320507_3322082_+	phospholipase D	NA	NA	NA	NA	NA
SPR42114.1|3322088_3323198_-	molybdenum ABC transporter ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
SPR42116.1|3323209_3323890_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
SPR42118.1|3323911_3324667_-	molybdate-binding periplasmic protein precursor	NA	NA	NA	NA	NA
SPR42120.1|3324802_3325684_-	putative hydrolase	NA	NA	NA	NA	NA
SPR42123.1|3325774_3326356_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42125.1|3326448_3326571_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42127.1|3326616_3326916_-	exported protein	NA	NA	NA	NA	NA
SPR42129.1|3327067_3327547_-	membrane protein	NA	NA	NA	NA	NA
SPR42131.1|3327562_3327928_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42133.1|3328266_3329703_-	probable TonB-dependent receptor	NA	NA	NA	NA	NA
SPR42135.1|3329699_3330128_-	regulatory protein	NA	NA	NA	NA	NA
SPR42136.1|3330218_3331169_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42138.1|3331250_3331622_-	partial	NA	NA	NA	NA	NA
SPR42139.1|3331696_3332470_-	putative molybdate-binding periplasmic protein	NA	NA	NA	NA	NA
SPR42141.1|3332602_3333613_-	putative exported protein	NA	NA	NA	NA	NA
SPR42143.1|3333764_3335420_-	gamma-glutamyltranspeptidase	NA	NA	NA	NA	NA
SPR42145.1|3335474_3335816_-	conserved hypothetical protein	NA	NA	NA	NA	NA
SPR42146.1|3335829_3337269_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42148.1|3337401_3338217_-	probable MerR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR42151.1|3338410_3339361_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42152.1|3339357_3340320_-	MFS transporter	NA	NA	NA	NA	NA
SPR42154.1|3340754_3341696_+	putative membrane protein	NA	NA	NA	NA	NA
SPR42156.1|3341922_3342663_+	putative TetR-family transcriptional regulator	NA	NA	NA	NA	NA
SPR42158.1|3342748_3343699_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42160.1|3344085_3344571_+	partial	NA	NA	NA	NA	NA
SPR42162.1|3344586_3345090_+	partial	NA	NA	NA	NA	NA
SPR42164.1|3345140_3346712_-	DNA-binding response regulator	NA	NA	NA	NA	NA
SPR42166.1|3347044_3348898_+	autotransporter	NA	NA	NA	NA	NA
SPR42168.1|3348942_3351507_+	autotransporter	NA	NA	NA	NA	NA
SPR42170.1|3351925_3352876_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42172.1|3354025_3355456_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42174.1|3356252_3357203_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
>prophage 27
LS398589	Bordetella pertussis strain VS366 genome assembly, chromosome: I	4144451	3515631	3573523	4144451	transposase,tRNA	Acinetobacter_phage(33.33%)	55	NA	NA
SPR42466.1|3515631_3516582_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42468.1|3516680_3517814_-	partial	NA	NA	NA	NA	NA
SPR42470.1|3518338_3519328_+	partial	NA	NA	NA	NA	NA
SPR42472.1|3519324_3519483_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42474.1|3519503_3520292_-	indole-3-glycerol phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
SPR42476.1|3520288_3521320_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
SPR42478.1|3521338_3521902_-	anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
SPR42480.1|3521957_3523478_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
SPR42481.1|3523741_3524446_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
SPR42483.1|3524453_3525182_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
SPR42485.1|3525296_3525671_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
SPR42487.1|3525713_3527003_+	membrane-bound transglycosylase	NA	NA	NA	NA	NA
SPR42489.1|3526999_3528169_+	ubiquinone biosynthesis hydroxylase family protein	NA	NA	NA	NA	NA
SPR42490.1|3528195_3529005_+	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
SPR42492.1|3529064_3530000_+	2-hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
SPR42494.1|3530012_3530963_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42496.1|3531061_3532024_-|tRNA	tRNA 2-thiocytidine biosynthesis protein	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
SPR42498.1|3532055_3532415_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
SPR42500.1|3532539_3533442_+	oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
SPR42502.1|3533443_3535210_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42504.1|3535250_3536027_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
SPR42506.1|3536323_3537391_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42508.1|3537350_3538301_-|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42511.1|3539152_3539473_+	ABC transporter permease	NA	NA	NA	NA	NA
SPR42513.1|3539545_3540427_+	ATP synthase A chain	NA	NA	NA	NA	NA
SPR42515.1|3540543_3540786_+	ATP synthase c chain	NA	NA	NA	NA	NA
SPR42517.1|3540923_3541394_+	ATP synthase B chain	NA	NA	NA	NA	NA
SPR42519.1|3541406_3541946_+	ATP synthase delta chain	NA	NA	NA	NA	NA
SPR42522.1|3541980_3543522_+	ATP synthase subunit alpha	NA	NA	NA	NA	NA
SPR42524.1|3543620_3544526_+	ATP synthase subunit gamma	NA	NA	NA	NA	NA
SPR42526.1|3544568_3545969_+	ATP synthase subunit beta	NA	NA	NA	NA	NA
SPR42528.1|3545978_3546401_+	ATP synthase epsilon chain	NA	NA	NA	NA	NA
SPR42530.1|3546583_3547468_+	hypothetical protein	NA	NA	NA	NA	NA
SPR42531.1|3547543_3548620_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
SPR42533.1|3548926_3551029_+	primosomal protein N'	NA	NA	NA	NA	NA
SPR42535.1|3551071_3553141_+	ATP-dependent DNA helicase	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
SPR42538.1|3553239_3554190_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42539.1|3554318_3555452_-	peptidase	NA	NA	NA	NA	NA
SPR42541.1|3555495_3556401_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42543.1|3556403_3558104_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
SPR42545.1|3558100_3559021_-	binding-protein-dependent transport permease	NA	NA	NA	NA	NA
SPR42547.1|3559028_3560006_-	putative binding-protein-dependent transport permease	NA	NA	NA	NA	NA
SPR42549.1|3560064_3561024_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
SPR42551.1|3561147_3562068_-	partial	NA	NA	NA	NA	NA
SPR42553.1|3563073_3563310_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42555.1|3563436_3564300_-	ADP-dependent (S)-NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
SPR42557.1|3564388_3565210_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
SPR42559.1|3565289_3566027_-	putative enoyl-CoA hydratase/isomerase	NA	NA	NA	NA	NA
SPR42561.1|3566023_3566995_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42563.1|3567168_3567792_+	TetR family transcriptional repressor	NA	NA	NA	NA	NA
SPR42565.1|3567836_3568985_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR42567.1|3568968_3569724_-	hypothetical protein	NA	NA	NA	NA	NA
SPR42569.1|3570405_3571227_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
SPR42571.1|3571308_3572259_+|transposase	transposase IS481 family	transposase	NA	NA	NA	NA
SPR42573.1|3572599_3573523_+|transposase	transposase for IS1002	transposase	NA	NA	NA	NA
