bac_id	bac_def	spacer_id	hit_contig_id	hit_contig_def	identity	alignment_length	mismatch	gapopen	query_start	query_end	hit_start	hit_end	crispr_array_of_hit_genome	evalue	bitscore	coverage	spacer_sequence	hit_contig_region	hit_contig_sequence	hmm_mismatch
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	2.1|318187|32|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	32	0	0	1	32	487221	487190	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	3e-09	52.3	1.0	AATAAAGGAATTTCTTTATACCAATTAGGGCA	487190-487221	TGCCCTAATTGGTATAAAGAAATTCCTTTATT	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	155630	155659	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	155630-155659	TATAGAGATTGGTGAAACTAAAGGCATAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	349446	349417	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	349417-349446	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	497916	497945	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	497916-497945	TATAGAGATTGGTGAAACTAAAGGCATAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	1624220	1624249	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1624220-1624249	TATAGAGATTGGTGAAACTAAAGGCATAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	1895446	1895417	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1895417-1895446	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	2033648	2033619	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2033619-2033648	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	2368487	2368458	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2368458-2368487	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	78998	78969	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	78969-78998	GCTCTGCCTTTAGTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	729186	729215	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	729186-729215	TATAGAGATTGGTGAAACTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	972410	972381	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	972381-972410	GCTATGCCTTTAGTCTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	1412014	1412043	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1412014-1412043	TATAGAGATTGGTGAAACTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	1583993	1583964	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1583964-1583993	GCTCTGCCTTTAGTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	2430921	2430950	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2430921-2430950	TATAGAGATTGGTGAAACTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	78962	78933	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	78933-78962	GCTATGCCTTTAATCTCACCAATCTCTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	155666	155695	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	155666-155695	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	280492	280521	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	280492-280521	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	349350	349321	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	349321-349350	GCTCTGCCTTTAGTCTCACCAATCTCTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	349398	349369	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	349369-349398	GCTATGCCTTTAATCTCACCAATCTCTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	729222	729251	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	729222-729251	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1624280	1624309	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1624280-1624309	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1785192	1785221	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1785192-1785221	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1785228	1785257	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1785228-1785257	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1946945	1946974	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1946945-1946974	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.1|497964|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	2328229	2328258	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2328229-2328258	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	155630	155659	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	155630-155659	TATAGAGATTGGTGAAACTAAAGGCATAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	349446	349417	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	349417-349446	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	497916	497945	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	497916-497945	TATAGAGATTGGTGAAACTAAAGGCATAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	1624220	1624249	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1624220-1624249	TATAGAGATTGGTGAAACTAAAGGCATAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	1895446	1895417	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1895417-1895446	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	2033648	2033619	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2033619-2033648	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	30	0	0	1	30	2368487	2368458	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-08	49.1	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2368458-2368487	GCTATGCCTTTAGTTTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	78998	78969	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	78969-78998	GCTCTGCCTTTAGTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	729186	729215	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	729186-729215	TATAGAGATTGGTGAAACTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	972410	972381	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	972381-972410	GCTATGCCTTTAGTCTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	1412014	1412043	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1412014-1412043	TATAGAGATTGGTGAAACTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	1583993	1583964	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1583964-1583993	GCTCTGCCTTTAGTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.67	30	1	0	1	30	2430921	2430950	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-07	46.0	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2430921-2430950	TATAGAGATTGGTGAAACTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	78962	78933	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	78933-78962	GCTATGCCTTTAATCTCACCAATCTCTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	155666	155695	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	155666-155695	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	280492	280521	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	280492-280521	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	349350	349321	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	349321-349350	GCTCTGCCTTTAGTCTCACCAATCTCTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	349398	349369	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	349369-349398	GCTATGCCTTTAATCTCACCAATCTCTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	729222	729251	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	729222-729251	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1624280	1624309	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1624280-1624309	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1785192	1785221	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1785192-1785221	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1785228	1785257	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1785228-1785257	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	1946945	1946974	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	1946945-1946974	TATAGAGATTGGTGAGATTAAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.2|498012|30|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	93.33	30	2	0	1	30	2328229	2328258	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-06	42.8	1.0	TATAGAGATTGGTGAAACTAAAGGCATAGC	2328229-2328258	TATAGAGATTGGTGAGACTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	155666	155683	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	TATAGAGATTGGTGAGAC	155666-155683	TATAGAGATTGGTGAGAC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	349350	349333	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	TATAGAGATTGGTGAGAC	349333-349350	GTCTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	972410	972393	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	TATAGAGATTGGTGAGAC	972393-972410	GTCTCACCAATCTCTATA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624280	1624297	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	TATAGAGATTGGTGAGAC	1624280-1624297	TATAGAGATTGGTGAGAC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1785192	1785209	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	TATAGAGATTGGTGAGAC	1785192-1785209	TATAGAGATTGGTGAGAC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	78998	78981	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	78981-78998	GTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	155630	155647	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	155630-155647	TATAGAGATTGGTGAAAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	349446	349429	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	349429-349446	GTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	497916	497933	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	497916-497933	TATAGAGATTGGTGAAAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	729186	729203	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	729186-729203	TATAGAGATTGGTGAAAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1135557	1135574	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	1135557-1135574	TATAGAGATTGGCGAGAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1412014	1412031	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	1412014-1412031	TATAGAGATTGGTGAAAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1583993	1583976	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	1583976-1583993	GTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1624220	1624237	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	1624220-1624237	TATAGAGATTGGTGAAAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1895446	1895429	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	1895429-1895446	GTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	2033648	2033631	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	2033631-2033648	GTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	2368487	2368470	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	2368470-2368487	GTTTCACCAATCTCTATA	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	2430921	2430938	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	TATAGAGATTGGTGAGAC	2430921-2430938	TATAGAGATTGGTGAAAC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	912909	912926	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	TATAGAGATTGGTGAGAC	912909-912926	TATAAAGCTTGGTGAGAC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1349861	1349878	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	TATAGAGATTGGTGAGAC	1349861-1349878	TATAAAGCTTGGTGAGAC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1465039	1465056	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	TATAGAGATTGGTGAGAC	1465039-1465056	TATAAAGCTTGGTGAGAC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1803428	1803445	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	TATAGAGATTGGTGAGAC	1803428-1803445	TATAAAGCTTGGTGAGAC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.3|498060|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	2209169	2209152	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	TATAGAGATTGGTGAGAC	2209152-2209169	GTCTCACCAAGCTTTATA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	78914	78897	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	78897-78914	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	78926	78909	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	78909-78926	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	155690	155707	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	155690-155707	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	155702	155719	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	155702-155719	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	180100	180083	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	180083-180100	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	180112	180095	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	180095-180112	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	280528	280545	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	280528-280545	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	280540	280557	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	280540-280557	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	349314	349297	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	349297-349314	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	349326	349309	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	349309-349326	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	434863	434846	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	434846-434863	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	498120	498137	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	498120-498137	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	682335	682352	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	682335-682352	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	729258	729275	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	729258-729275	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	729270	729287	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	729270-729287	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	912885	912902	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	912885-912902	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	912933	912950	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	912933-912950	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	972350	972333	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	972333-972350	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	972362	972345	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	972345-972362	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1230055	1230072	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1230055-1230072	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1349837	1349854	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1349837-1349854	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1349885	1349902	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1349885-1349902	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1412050	1412067	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1412050-1412067	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1465075	1465092	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1465075-1465092	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1507881	1507864	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1507864-1507881	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1583933	1583916	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1583916-1583933	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1583945	1583928	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1583928-1583945	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1583957	1583940	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1583940-1583957	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1583969	1583952	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1583952-1583969	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624256	1624273	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624256-1624273	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624316	1624333	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624316-1624333	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624328	1624345	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624328-1624345	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624340	1624357	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624340-1624357	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624352	1624369	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624352-1624369	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624364	1624381	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624364-1624381	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1624376	1624393	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1624376-1624393	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1785264	1785281	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1785264-1785281	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1803452	1803469	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1803452-1803469	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1895386	1895369	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1895369-1895386	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	1895398	1895381	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	1895381-1895398	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2209145	2209128	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2209128-2209145	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2209193	2209176	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2209176-2209193	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2328265	2328282	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2328265-2328282	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2328277	2328294	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2328277-2328294	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2360496	2360513	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2360496-2360513	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2368403	2368386	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2368386-2368403	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2368415	2368398	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2368398-2368415	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2368427	2368410	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2368410-2368427	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2368439	2368422	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2368422-2368439	GCTCTGCCTTCAGCTCTG	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2430945	2430962	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2430945-2430962	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2430957	2430974	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2430957-2430974	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	18	0	0	1	18	2430969	2430986	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.008	30.1	1.0	CAGAGCTGAAGGCAGAGC	2430969-2430986	CAGAGCTGAAGGCAGAGC	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1135581	1135598	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1135581-1135598	CAGAGCTGAAGGCATAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1412038	1412055	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1412038-1412055	CAGAGCTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1465015	1465032	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1465015-1465032	CAGAGCTGAAGGCAGGGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1465063	1465080	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1465063-1465080	CAAAGCTGAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1624304	1624321	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1624304-1624321	CAGAGCTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1946993	1947010	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1946993-1947010	CAGAGCTGAAGGCATAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1947005	1947022	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1947005-1947022	CATAGCTGAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1947017	1947034	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1947017-1947034	CAGAGCTGAAGGCATAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	1947029	1947046	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	1947029-1947046	CATAGCTGAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	94.44	18	1	0	1	18	2328253	2328270	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.076	26.9	1.0	CAGAGCTGAAGGCAGAGC	2328253-2328270	CAGAGCTAAAGGCAGAGC	1
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	78938	78921	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	78921-78938	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	180124	180107	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	180107-180124	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	280516	280533	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	280516-280533	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	349374	349357	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	349357-349374	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	349422	349405	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	349405-349422	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	497940	497957	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	497940-497957	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	729246	729263	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	729246-729263	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	798854	798837	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	798837-798854	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	972374	972357	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	972357-972374	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1135593	1135610	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	1135593-1135610	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1411990	1412007	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	1411990-1412007	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1624244	1624261	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	1624244-1624261	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1785252	1785269	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	1785252-1785269	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1895410	1895393	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	1895393-1895410	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	1946981	1946998	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	1946981-1946998	CATAGCTAAAGGCAGAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	2033624	2033607	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	2033607-2033624	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	3.4|498096|18|LS398548|CRT	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	88.89	18	2	0	1	18	2368451	2368434	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	0.69	23.8	1.0	CAGAGCTGAAGGCAGAGC	2368434-2368451	GCTCTGCCTTTAGCTATG	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	4.2|1662361|62|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.77	62	2	0	1	62	117509	117448	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	6e-21	93.5	1.0	GAAAAATCTTGGAAAGCTACTAGAAGCAATTGACAATTATGATCAAGCTATGCGATACAACA	117448-117509	TGCTGTATCGAATAGCTTGATCATAATTGTCAATTGCTTCTAGTAGCTTTCCAAGATTTTTC	4
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	5.1|1790745|55|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	55	0	0	1	55	188975	188921	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	1e-19	88.8	1.0	ATCTGGTTTATACTTAATAGCTAAATCAAAATTCTCTATTGCATCTTGATATTGT	188921-188975	ACAATATCAAGATGCAATAGAGAATTTTGATTTAGCTATTAAGTATAAACCAGAT	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	5.1|1790745|55|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.36	55	2	0	1	55	903203	903257	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	1e-17	82.4	1.0	ATCTGGTTTATACTTAATAGCTAAATCAAAATTCTCTATTGCATCTTGATATTGT	903203-903257	ATCTGGTTTATACTTAATAGCCAAATCAAAATTCTCTATTGCCTCTTGATATTGT	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	5.1|1790745|55|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.36	55	2	0	1	55	1339509	1339563	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	1e-17	82.4	1.0	ATCTGGTTTATACTTAATAGCTAAATCAAAATTCTCTATTGCATCTTGATATTGT	1339509-1339563	ATCTGGTTTATACTTAATAGCCAAATCAAAATTCTCTATTGCCTCTTGATATTGT	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	5.1|1790745|55|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.36	55	2	0	1	55	1455369	1455423	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	1e-17	82.4	1.0	ATCTGGTTTATACTTAATAGCTAAATCAAAATTCTCTATTGCATCTTGATATTGT	1455369-1455423	ATCTGGTTTATACTTAATAGCCAAATCAAAATTCTCTATTGCCTCTTGATATTGT	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	5.1|1790745|55|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.36	55	2	0	1	55	1594978	1594924	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	1e-17	82.4	1.0	ATCTGGTTTATACTTAATAGCTAAATCAAAATTCTCTATTGCATCTTGATATTGT	1594924-1594978	ACAATATCAAGAGGCAATAGAGAATTTTGATTTGGCTATTAAGTATAAACCAGAT	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	5.2|1790847|72|LS398548|PILER-CR	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	72	0	0	1	72	188890	188819	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-27	115	1.0	TTGTAAGCATTTGGTAAATCTGGTTTATACTTAATAGCTTGATCATAATTTTCAATTGCTTCTAGTAGCTTA	188819-188890	TAAGCTACTAGAAGCAATTGAAAATTATGATCAAGCTATTAAGTATAAACCAGATTTACCAAATGCTTACAA	12
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	6.1|2328171|52|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	100.00	52	0	0	1	52	2368449	2368398	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	3e-18	84.0	1.0	TAGCTAAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGC	2368398-2368449	GCTCTGCCTTCAGCTCTGCCTTCAGCTCTGCCTTCAGCTCTGCCTTTAGCTA	0
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	6.1|2328171|52|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.15	52	2	0	1	52	180134	180083	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-16	77.7	1.0	TAGCTAAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGC	180083-180134	GCTCTGCCTTCAGCTCTGCCTTCAGCTCTGCCTTTAGCTATGCCTTTAGCTA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	6.1|2328171|52|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.15	52	2	0	1	52	972384	972333	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-16	77.7	1.0	TAGCTAAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGC	972333-972384	GCTCTGCCTTCAGCTCTGCCTTCAGCTCTGCCTTTAGCTATGCCTTTAGCTA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	6.1|2328171|52|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.15	52	2	0	1	52	1895420	1895369	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-16	77.7	1.0	TAGCTAAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGC	1895369-1895420	GCTCTGCCTTCAGCTCTGCCTTCAGCTCTGCCTTTAGCTATGCCTTTAGCTA	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	6.1|2328171|52|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.15	52	2	0	1	52	1946983	1947034	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-16	77.7	1.0	TAGCTAAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGC	1946983-1947034	TAGCTAAAGGCAGAGCTGAAGGCATAGCTGAAGGCAGAGCTGAAGGCATAGC	2
LS398548	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	6.1|2328171|52|LS398548|CRISPRCasFinder	LS398548.1	Orientia tsutsugamushi isolate Karp genome assembly, chromosome: I	96.15	52	2	0	1	52	2368461	2368410	280424-280506|318163-318242|497946-498131|1662219-1662558|1790698-1790948|2328139-2328254|2404586-2404808	2e-16	77.7	1.0	TAGCTAAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGCTGAAGGCAGAGC	2368410-2368461	GCTCTGCCTTCAGCTCTGCCTTCAGCTCTGCCTTTAGCTATGCCTTTAGCTA	2
