The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	155566	193525	3060363	portal,tail	Corynebacterium_phage(53.12%)	53	NA	NA
SPJ39412.1|155566_156601_-	Putative phenylalanine aminotransferase	NA	A0A1X6WGT4	Pacmanvirus	25.1	8.3e-16
SPJ39413.1|157132_158140_+	hypothetical protein	NA	A0A220NQR4	Corynebacterium_phage	58.2	1.4e-108
SPJ39414.1|158368_159595_-	Tyrosine recombinase XerC	NA	A0A1W6JRD7	Corynebacterium_phage	91.7	4.8e-220
SPJ39415.1|159765_160605_-	hypothetical protein	NA	A0A1W6JRH2	Corynebacterium_phage	93.2	7.7e-145
SPJ39416.1|160607_161417_-	hypothetical protein	NA	A0A1W6JRC0	Corynebacterium_phage	93.6	5.5e-148
SPJ39417.1|161440_161674_-	hypothetical protein	NA	A0A1W6JRB8	Corynebacterium_phage	93.0	2.8e-36
SPJ39418.1|161670_161820_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ39419.1|161894_162029_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ39420.1|162124_162532_-	hypothetical protein	NA	A0A1W6JRC2	Corynebacterium_phage	94.1	1.5e-69
SPJ39421.1|162541_163033_-	hypothetical protein	NA	A0A1W6JRB0	Corynebacterium_phage	95.7	6.6e-80
SPJ39422.1|163096_163387_+	helix-turn-helix protein	NA	A0A1W6JRC7	Corynebacterium_phage	100.0	5.0e-35
SPJ39423.1|163435_163903_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39424.1|164126_164507_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ39425.1|164694_164961_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ39426.1|165054_165873_+	Phage antirepressor protein KilAC domain protein	NA	A0A1W6JRI1	Corynebacterium_phage	89.7	1.3e-136
SPJ39427.1|165890_166091_+	Helix-turn-helix domain protein	NA	NA	NA	NA	NA
SPJ39428.1|166087_166330_+	hypothetical protein	NA	A0A1W6JRC8	Corynebacterium_phage	60.3	2.9e-20
SPJ39429.1|166341_166566_+	hypothetical protein	NA	A0A1W6JRD0	Corynebacterium_phage	44.4	4.9e-06
SPJ39430.1|166562_166709_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39431.1|166698_166986_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39432.1|166978_167128_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39433.1|167124_167826_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39434.1|167822_168233_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39435.1|168261_169254_+	hypothetical protein	NA	A0A220NQT1	Corynebacterium_phage	61.2	7.5e-115
SPJ39436.1|169246_169834_+	hypothetical protein	NA	A0A1W6JRC6	Corynebacterium_phage	59.5	4.5e-59
SPJ39437.1|170453_170927_+	hypothetical protein	NA	A0A1C9EHY3	Gordonia_phage	49.6	4.5e-25
SPJ39438.1|170910_171978_+	hypothetical protein	NA	A0A1C9EHW4	Gordonia_phage	57.4	2.4e-119
SPJ39439.1|171952_172564_+	hypothetical protein	NA	A0A1C9EHV3	Gordonia_phage	57.8	4.7e-59
SPJ39440.1|172560_173889_+|portal	Phage portal protein, SPP1 Gp6-like	portal	A0A222YZB0	Rhodococcus_phage	34.1	8.1e-56
SPJ39441.1|173905_175618_+	hypothetical protein	NA	A0A1C9EHV4	Gordonia_phage	33.3	4.7e-40
SPJ39442.1|175614_175917_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39443.1|175991_176612_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39444.1|176623_177613_+	hypothetical protein	NA	G9FH86	Rhodococcus_phage	60.1	6.3e-106
SPJ39445.1|177621_177921_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39446.1|177931_178342_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39447.1|178338_178707_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39448.1|178703_179024_+	hypothetical protein	NA	A0A1C9EHV8	Gordonia_phage	43.7	4.8e-15
SPJ39449.1|179032_179476_+	hypothetical protein	NA	A0A1C9EI09	Gordonia_phage	28.9	5.9e-11
SPJ39450.1|179485_180022_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39451.1|180018_180327_+	hypothetical protein	NA	A0A1W6JRH0	Corynebacterium_phage	48.8	1.1e-13
SPJ39452.1|180417_180771_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39453.1|180878_181214_+	hypothetical protein	NA	A0A1C9EHV2	Gordonia_phage	43.5	1.3e-07
SPJ39454.1|181230_183678_+|tail	Phage-related minor tail protein	tail	A0A166XZ24	Gordonia_phage	44.1	1.6e-62
SPJ39455.1|183677_187202_+	Chromosome partition protein Smc	NA	A0A0F6WEB4	Mycobacterium_phage	35.8	2.7e-18
SPJ39456.1|187218_188001_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39457.1|188001_188898_+	hypothetical protein	NA	Q37921	Corynephage	40.1	2.1e-52
SPJ39458.1|188890_190015_+	hypothetical protein	NA	Q37922	Corynephage	61.0	1.9e-90
SPJ39459.1|190014_191238_+	hypothetical protein	NA	A0A1W6JRF8	Corynebacterium_phage	50.0	6.1e-42
SPJ39460.1|191237_191489_+	Carbohydrate binding domain protein	NA	NA	NA	NA	NA
SPJ39461.1|191622_192393_+	N-acetyl-anhydromuranmyl-L-alanine amidase	NA	A0A2P1JY73	Gordonia_phage	53.7	5.9e-67
SPJ39462.1|192395_192719_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39463.1|192725_193190_+	hypothetical protein	NA	A0A1W6JRF4	Corynebacterium_phage	74.8	1.3e-56
SPJ39464.1|193186_193525_+	hypothetical protein	NA	A0A1W6JRH1	Corynebacterium_phage	45.9	2.6e-19
>prophage 2
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	337720	345538	3060363		Escherichia_phage(33.33%)	9	NA	NA
SPJ39605.1|337720_337921_-	hypothetical protein	NA	Q6H9S3	Enterobacteria_phage	44.0	6.7e-07
SPJ39606.1|338153_338744_-	Integrase core domain protein	NA	S5FNT8	Shigella_phage	41.8	5.4e-12
SPJ39607.1|338864_339014_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ39608.1|339001_339313_-	Transposase	NA	NA	NA	NA	NA
SPJ39609.1|339351_339735_-	hypothetical protein	NA	A0A0N7C1X7	Escherichia_phage	48.7	2.1e-20
SPJ39610.1|340773_342426_-	Long-chain-fatty-acid--CoA ligase	NA	A0A2K9L3I8	Tupanvirus	22.2	1.9e-14
SPJ39611.1|342474_343344_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ39612.1|343307_344180_-	Glucose-1-phosphate thymidylyltransferase	NA	H9NC64	Sphingomonas_phage	58.4	3.8e-94
SPJ39613.1|344191_345538_-	putative dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A1D8EQE2	Escherichia_phage	36.6	6.3e-24
>prophage 3
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	520729	529712	3060363		Erysipelothrix_phage(25.0%)	9	NA	NA
SPJ39808.1|520729_520948_-	VRR-NUC domain protein	NA	A0A1S7FZ22	Listeria_phage	53.0	1.4e-13
SPJ39809.1|521084_523352_-	hypothetical protein	NA	A0A1B0RXC5	Streptococcus_phage	45.5	2.1e-184
SPJ39810.1|523348_523792_-	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	48.2	5.5e-33
SPJ39811.1|523788_524556_-	Phage antirepressor protein KilAC domain protein	NA	A0A1Q1PVZ8	Staphylococcus_phage	45.9	6.5e-58
SPJ39812.1|524813_525734_+	Abi-like protein	NA	A3QSC6	Clostridium_virus	25.4	1.9e-16
SPJ39813.1|525730_527692_-	DNA polymerase I, thermostable	NA	A0A2K5B2B0	Erysipelothrix_phage	54.4	6.1e-209
SPJ39814.1|527770_527980_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ39815.1|527997_528552_-	hypothetical protein	NA	A0A0A7RVM4	Clostridium_phage	57.3	2.6e-48
SPJ39816.1|528578_529712_-	PD-(D/E)XK nuclease superfamily protein	NA	A0A1W6JQ97	Corynebacterium_phage	59.0	4.1e-117
>prophage 4
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	809467	818196	3060363		Bacillus_phage(33.33%)	9	NA	NA
SPJ40090.1|809467_811240_-	Iron import ATP-binding/permease protein IrtB	NA	W8CYL7	Bacillus_phage	26.5	8.9e-26
SPJ40091.1|811232_812981_-	Iron import ATP-binding/permease protein IrtA	NA	W8CYL7	Bacillus_phage	27.0	3.6e-35
SPJ40092.1|812977_814459_-	Putative HMP/thiamine import ATP-binding protein YkoD	NA	G9BWD6	Planktothrix_phage	32.1	8.0e-12
SPJ40093.1|814455_815181_-	Cobalt transport protein	NA	NA	NA	NA	NA
SPJ40094.1|815177_815813_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ40095.1|815990_816143_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40096.1|816437_816857_+	Integrase core domain protein	NA	A0A1B3AZE5	Gordonia_phage	47.2	9.7e-24
SPJ40097.1|816923_817232_+	hypothetical protein	NA	Q8W6R2	Burkholderia_virus	42.4	5.1e-06
SPJ40098.1|817335_818196_-	Integrase core domain protein	NA	S5FNT8	Shigella_phage	29.3	9.3e-13
>prophage 5
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	854689	897782	3060363	integrase,capsid,portal	Mycobacterium_phage(20.59%)	65	857555:857571	901575:901591
SPJ40143.1|854689_855580_+	Cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	1.2e-26
SPJ40144.1|855596_856499_+	Cell division protein FtsX	NA	NA	NA	NA	NA
SPJ40145.1|856603_857095_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	51.6	4.5e-36
857555:857571	attL	ATTCCCGGCAGCTCCAC	NA	NA	NA	NA
SPJ40146.1|857746_859000_+|integrase	Putative prophage phiRv2 integrase	integrase	G1JV00	Mycobacterium_phage	27.1	7.0e-25
SPJ40147.1|859016_859244_-	hypothetical protein	NA	A0A1W6JRB8	Corynebacterium_phage	54.9	1.3e-17
SPJ40148.1|859487_859616_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ40149.1|859664_860189_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40150.1|860284_860623_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ40151.1|860619_861069_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ40152.1|861207_861582_-	hypothetical protein	NA	A0A1P8D5N3	Corynebacterium_phage	58.7	1.9e-34
SPJ40153.1|861593_862295_-	hypothetical protein	NA	A0A1P8D5Q1	Corynebacterium_phage	48.2	3.8e-28
SPJ40154.1|862589_862820_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40155.1|862887_863649_+	hypothetical protein	NA	A0A1L6BZH6	Pasteurella_phage	60.6	7.6e-83
SPJ40156.1|863677_864061_+	hypothetical protein	NA	G8I4X6	Mycobacterium_virus	44.0	8.6e-27
SPJ40157.1|864057_864810_+	Phage antirepressor protein KilAC domain protein	NA	A0A0K0N5U2	Gordonia_phage	40.0	1.3e-26
SPJ40158.1|864869_865040_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40159.1|865036_865228_+	Helix-turn-helix domain protein	NA	NA	NA	NA	NA
SPJ40160.1|865247_865514_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40161.1|865873_866083_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40162.1|866079_866598_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40163.1|866587_866767_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40164.1|866763_866976_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40165.1|866972_867161_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40166.1|867157_868069_+	YqaJ-like viral recombinase domain protein	NA	A0A2K9VGR3	Pontimonas_phage	36.9	4.0e-14
SPJ40167.1|868065_868896_+	ERF superfamily protein	NA	A0A1B0XTM7	Freshwater_phage	47.4	1.2e-28
SPJ40168.1|868879_869263_+	hypothetical protein	NA	A0A0K2FMZ9	Mycobacterium_phage	43.0	2.2e-14
SPJ40169.1|869283_869664_+	HNH endonuclease	NA	NA	NA	NA	NA
SPJ40170.1|869651_870479_+	DeoR-like helix-turn-helix domain protein	NA	A0A0F6YQJ2	Mycobacterium_phage	43.5	9.6e-07
SPJ40171.1|870475_871027_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40172.1|871198_871696_+	Single-stranded DNA-binding protein	NA	A0A2H4YHU9	Gordonia_phage	56.7	1.0e-32
SPJ40173.1|871695_871848_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40174.1|872032_872284_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40175.1|872437_872755_+	Endodeoxyribonuclease RusA	NA	NA	NA	NA	NA
SPJ40176.1|872775_873174_+	hypothetical protein	NA	A0A222ZS52	Mycobacterium_phage	55.7	5.8e-10
SPJ40177.1|873166_873871_+	Secreted effector protein pipB2	NA	A0A2H4P8Q0	Corynebacterium_phage	42.5	3.8e-12
SPJ40178.1|873870_874236_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40179.1|874232_875159_+	Type I restriction enzyme EcoKI M protein	NA	A0A2I6PG28	Plesiomonas_phage	45.0	3.8e-68
SPJ40180.1|875155_875686_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40181.1|875718_876024_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40182.1|876084_876627_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40183.1|876459_876894_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ40184.1|877248_877932_+	HNH endonuclease	NA	A0A2H4PF54	Gordonia_phage	28.7	6.5e-17
SPJ40185.1|877944_878361_+	hypothetical protein	NA	A0A162E1R7	Tsukamurella_phage	45.0	2.5e-24
SPJ40186.1|878338_878737_+	hypothetical protein	NA	A0A159B6M5	Tsukamurella_phage	64.9	5.6e-37
SPJ40187.1|878714_880115_+	hypothetical protein	NA	A0A159B6M5	Tsukamurella_phage	58.7	7.0e-143
SPJ40188.1|880111_881563_+|portal	Phage portal protein, SPP1 Gp6-like	portal	A0A159B6N0	Tsukamurella_phage	39.3	4.2e-74
SPJ40189.1|881575_882724_+	hypothetical protein	NA	A0A220NQN8	Corynebacterium_phage	26.1	1.1e-13
SPJ40190.1|882713_882965_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40191.1|883184_883748_+	hypothetical protein	NA	A0A2P1CHD0	Mycobacterium_phage	38.4	5.9e-08
SPJ40192.1|883780_884164_+	hypothetical protein	NA	A0A160DEN0	Gordonia_phage	43.2	1.8e-16
SPJ40193.1|884164_885190_+|capsid	Phage major capsid protein E	capsid	A0A166XYQ6	Gordonia_phage	46.8	3.1e-79
SPJ40194.1|885206_885431_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40195.1|885411_885786_+	hypothetical protein	NA	A0A1J0MDW8	Mycobacterium_phage	40.3	1.8e-08
SPJ40196.1|885790_886150_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40197.1|886153_886330_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40198.1|886335_886575_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40199.1|886571_886934_+	hypothetical protein	NA	A0A2D1G9Q5	Mycobacterium_phage	31.2	2.1e-06
SPJ40200.1|886968_887865_+	hypothetical protein	NA	A0A2H4PEW8	Gordonia_phage	36.6	2.0e-21
SPJ40201.1|887957_888236_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40202.1|888292_888847_+	hypothetical protein	NA	A0A2H4PEX5	Gordonia_phage	29.4	1.2e-05
SPJ40203.1|888865_893713_+	hypothetical protein	NA	A0A1P8BLF5	Lactococcus_phage	41.2	4.1e-73
SPJ40204.1|893738_894530_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ40205.1|894496_895417_+	hypothetical protein	NA	A0A1P8D5L4	Corynebacterium_phage	31.6	7.1e-27
SPJ40206.1|895416_896589_+	hypothetical protein	NA	Q37922	Corynephage	51.0	8.1e-76
SPJ40207.1|896588_897782_+	hypothetical protein	NA	A0A1W6JRF8	Corynebacterium_phage	50.0	6.0e-42
901575:901591	attR	ATTCCCGGCAGCTCCAC	NA	NA	NA	NA
>prophage 6
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	2071480	2079704	3060363		Erysipelothrix_phage(37.5%)	13	NA	NA
SPJ41340.1|2071480_2071927_+	Integrase core domain protein	NA	A0A1P8CWQ3	Bacillus_phage	35.2	1.2e-11
SPJ41341.1|2071943_2072657_-	ParB-like nuclease domain protein	NA	A0A2I4R670	Erysipelothrix_phage	54.1	1.6e-66
SPJ41342.1|2072628_2073603_-	S-adenosylmethionine synthase	NA	A0A2K5B278	Erysipelothrix_phage	58.6	2.4e-89
SPJ41343.1|2073648_2074131_+	Transposase	NA	NA	NA	NA	NA
SPJ41344.1|2074196_2074991_+	Integrase core domain protein	NA	A0A1B1P773	Bacillus_phage	41.6	1.2e-54
SPJ41345.1|2075017_2075266_-	S-adenosylmethionine synthase	NA	A0A1B0RXC1	Streptococcus_phage	47.3	1.1e-06
SPJ41346.1|2075381_2075954_-	hypothetical protein	NA	A0A2K5B277	Erysipelothrix_phage	51.1	1.6e-48
SPJ41347.1|2076213_2076591_-	HNH endonuclease	NA	A0A075M5R4	Enterococcus_phage	33.0	1.5e-10
SPJ41348.1|2076798_2077119_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41349.1|2077175_2077787_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41350.1|2077768_2078248_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41351.1|2078375_2078771_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41352.1|2078831_2079704_-	hypothetical protein	NA	A0A1L6BZE2	Pasteurella_phage	59.5	5.8e-95
>prophage 7
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	2168797	2185383	3060363	protease	Streptococcus_phage(23.08%)	19	NA	NA
SPJ41455.1|2168797_2169427_-|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	A0A223W000	Agrobacterium_phage	44.0	3.6e-38
SPJ41456.1|2169444_2170044_-|protease	ATP-dependent Clp protease proteolytic subunit 2	protease	A0A223W000	Agrobacterium_phage	46.7	3.3e-41
SPJ41457.1|2170208_2171555_-	Trigger factor	NA	NA	NA	NA	NA
SPJ41458.1|2172285_2173125_-	Recombinase	NA	Q6DMS5	Streptococcus_phage	34.9	3.3e-39
SPJ41459.1|2173084_2173840_-	Transposon Tn3 resolvase	NA	M1PSD6	Streptococcus_phage	66.1	8.3e-74
SPJ41460.1|2173844_2175083_-	Transposon Tn3 resolvase	NA	D0R0F3	Streptococcus_phage	36.5	1.5e-59
SPJ41461.1|2175162_2175345_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41462.1|2175389_2175842_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41463.1|2175944_2176877_-	N-acetylmuramoyl-L-alanine amidase A	NA	A0A221J6T7	Arthrobacter_phage	52.6	9.4e-27
SPJ41464.1|2176873_2177434_-	Holin family protein	NA	A0A2K5B2A2	Erysipelothrix_phage	61.6	1.6e-37
SPJ41465.1|2177457_2177700_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41466.1|2177885_2178197_+	Transposase	NA	NA	NA	NA	NA
SPJ41467.1|2178184_2179045_+	Integrase core domain protein	NA	S5FNT8	Shigella_phage	28.9	2.5e-13
SPJ41468.1|2179105_2179531_-	hypothetical protein	NA	A0A2K5B270	Erysipelothrix_phage	45.2	7.8e-29
SPJ41469.1|2179527_2180325_-	Phage antirepressor protein KilAC domain protein	NA	A0A1Q1PVZ8	Staphylococcus_phage	47.3	4.8e-56
SPJ41470.1|2180677_2181655_+	Abi-like protein	NA	NA	NA	NA	NA
SPJ41471.1|2181651_2183601_-	DNA polymerase I, thermostable	NA	A0A1W6JQ98	Corynebacterium_phage	54.6	1.6e-201
SPJ41472.1|2183685_2184234_-	hypothetical protein	NA	A0A2K5B2A9	Erysipelothrix_phage	65.6	2.4e-62
SPJ41473.1|2184252_2185383_-	PD-(D/E)XK nuclease superfamily protein	NA	A0A1W6JQ97	Corynebacterium_phage	59.0	2.6e-119
>prophage 8
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	2281913	2295124	3060363	portal	Corynebacterium_phage(46.15%)	20	NA	NA
SPJ41581.1|2281913_2282747_+	NH(3)-dependent NAD(+) synthetase	NA	G3MA24	Bacillus_virus	56.5	2.3e-80
SPJ41582.1|2282743_2283181_-	Pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
SPJ41583.1|2283273_2283519_-	hypothetical protein	NA	Q9MBM9	Staphylococcus_prophage	53.2	2.2e-12
SPJ41584.1|2283748_2284024_+	Transposase, Mutator family	NA	A0A220NQR7	Corynebacterium_phage	38.8	4.6e-06
SPJ41585.1|2284109_2284532_+	Transposase, Mutator family	NA	A0A220NQR7	Corynebacterium_phage	42.3	9.5e-19
SPJ41586.1|2285084_2285522_-	hypothetical protein	NA	A0A2H4PEW8	Gordonia_phage	39.4	2.6e-11
SPJ41587.1|2285556_2285919_-	hypothetical protein	NA	A0A2D1G9Q5	Mycobacterium_phage	31.2	2.1e-06
SPJ41588.1|2285915_2286155_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41589.1|2286160_2286337_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41590.1|2286340_2286685_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41591.1|2286678_2287059_-	hypothetical protein	NA	A0A220NQP1	Corynebacterium_phage	45.7	1.7e-22
SPJ41592.1|2287062_2287968_-	hypothetical protein	NA	A0A220NQP6	Corynebacterium_phage	37.9	8.8e-46
SPJ41593.1|2287988_2288360_-	hypothetical protein	NA	A0A0U3TK33	Arthrobacter_phage	41.3	3.5e-09
SPJ41594.1|2288381_2288933_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41595.1|2289136_2290486_+	Transposase, Mutator family	NA	A0A218MNI5	uncultured_virus	36.6	1.4e-34
SPJ41596.1|2290614_2290953_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41597.1|2290936_2292184_-	hypothetical protein	NA	A0A220NQN8	Corynebacterium_phage	31.3	2.0e-32
SPJ41598.1|2292204_2293593_-|portal	Phage portal protein, SPP1 Gp6-like	portal	A0A220NQP2	Corynebacterium_phage	52.3	5.0e-125
SPJ41599.1|2293690_2293816_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41600.1|2293774_2295124_-	Transposase, Mutator family	NA	A0A218MNI5	uncultured_virus	36.6	1.4e-34
>prophage 9
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	2481385	2490744	3060363	terminase	uncultured_virus(25.0%)	18	NA	NA
SPJ41788.1|2481385_2482765_+|terminase	Putative ATPase subunit of terminase (gpP-like)	terminase	A0A1B1P773	Bacillus_phage	33.7	7.9e-38
SPJ41789.1|2482885_2483002_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41790.1|2483260_2483509_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41791.1|2483447_2483687_+	Transposase, Mutator family	NA	NA	NA	NA	NA
SPJ41792.1|2483734_2483920_+	Transposase, Mutator family	NA	NA	NA	NA	NA
SPJ41793.1|2483935_2484358_+	Transposase, Mutator family	NA	A0A218MNI5	uncultured_virus	42.1	7.8e-21
SPJ41794.1|2484338_2484626_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41795.1|2484576_2485926_-	Transposase, Mutator family	NA	A0A218MNI5	uncultured_virus	36.6	1.4e-34
SPJ41796.1|2486852_2486999_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41797.1|2486995_2487295_+	Integrase core domain protein	NA	NA	NA	NA	NA
SPJ41798.1|2487382_2487619_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41799.1|2487672_2487990_+	hypothetical protein	NA	A0A2K5B295	Erysipelothrix_phage	53.3	7.4e-24
SPJ41800.1|2488192_2488480_-	hypothetical protein	NA	A4JWV1	Burkholderia_virus	53.5	1.6e-17
SPJ41801.1|2488476_2488794_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41802.1|2488840_2489497_+	Chromosome partition protein Smc	NA	A0A2K5B297	Erysipelothrix_phage	57.5	1.1e-18
SPJ41803.1|2489521_2489671_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41804.1|2489832_2490372_+	Integrase core domain protein	NA	Q8W6R2	Burkholderia_virus	45.1	1.9e-24
SPJ41805.1|2490474_2490744_+	hypothetical protein	NA	Q6H9S3	Enterobacteria_phage	50.0	1.4e-15
>prophage 10
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	2636064	2651382	3060363	portal,head,tail,protease,capsid	Erysipelothrix_phage(46.15%)	25	NA	NA
SPJ41952.1|2636064_2636925_-	Integrase core domain protein	NA	S5FNT8	Shigella_phage	28.9	2.5e-13
SPJ41953.1|2636912_2637074_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41954.1|2637104_2637224_-	Transposase	NA	NA	NA	NA	NA
SPJ41955.1|2637189_2638161_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41956.1|2638215_2639517_+|portal	Phage portal protein	portal	A0A2K5B287	Erysipelothrix_phage	71.1	4.8e-170
SPJ41957.1|2639513_2640293_+|protease	ATP-dependent Clp protease proteolytic subunit 1	protease	E4ZFM4	Streptococcus_phage	56.3	3.4e-54
SPJ41958.1|2640314_2641544_+|capsid	Phage capsid family protein	capsid	A0A2I4R671	Erysipelothrix_phage	57.4	4.3e-128
SPJ41959.1|2641573_2641891_+|head,tail	Phage gp6-like head-tail connector protein	head,tail	NA	NA	NA	NA
SPJ41960.1|2641907_2642252_+|head,tail	Phage head-tail joining protein	head,tail	NA	NA	NA	NA
SPJ41961.1|2642251_2642497_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41962.1|2642480_2642672_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41963.1|2642668_2643013_+	hypothetical protein	NA	A0A2K5B293	Erysipelothrix_phage	42.7	1.7e-21
SPJ41964.1|2643031_2643640_+	hypothetical protein	NA	A0A2K5B294	Erysipelothrix_phage	66.0	8.5e-69
SPJ41965.1|2643651_2644053_+	hypothetical protein	NA	A0A2K5B295	Erysipelothrix_phage	49.6	1.0e-22
SPJ41966.1|2644387_2644576_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41967.1|2644572_2645508_-	Abi-like protein	NA	A3QSC6	Clostridium_virus	32.1	2.2e-23
SPJ41968.1|2645872_2646802_+	Chromosome partition protein Smc	NA	A0A2K5B297	Erysipelothrix_phage	59.8	4.7e-18
SPJ41969.1|2646859_2646979_+	Transposase	NA	NA	NA	NA	NA
SPJ41970.1|2647009_2647171_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41971.1|2647158_2648019_+	Integrase core domain protein	NA	S5FNT8	Shigella_phage	28.9	2.5e-13
SPJ41972.1|2648015_2648303_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ41973.1|2648600_2649116_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ41974.1|2649112_2650150_-	Recombinase	NA	Q6DMS5	Streptococcus_phage	40.7	3.6e-43
SPJ41975.1|2650326_2650644_+	hypothetical protein	NA	A0A2P1JR43	Mycobacterium_phage	43.3	1.0e-09
SPJ41976.1|2650713_2651382_+	Integrase core domain protein	NA	Q6H9S3	Enterobacteria_phage	47.2	2.4e-40
>prophage 11
LT990688	Corynebacterium diphtheriae strain CHUV2995 genome assembly, chromosome: 1	3060363	2708964	2716829	3060363	terminase	Mycobacterium_phage(28.57%)	12	NA	NA
SPJ42024.1|2708964_2709399_-	hypothetical protein	NA	A0A2H4PDF8	Mycobacterium_phage	68.0	2.3e-28
SPJ42025.1|2709420_2709753_-	Transposase, Mutator family	NA	A0A220NQR7	Corynebacterium_phage	50.0	1.8e-09
SPJ42026.1|2709767_2710238_-	Transposase, Mutator family	NA	A0A0K2CZ57	Paenibacillus_phage	45.0	4.0e-26
SPJ42027.1|2710409_2710658_-	Transposase, Mutator family	NA	NA	NA	NA	NA
SPJ42028.1|2710743_2711238_-	Transposase	NA	A0A2H4PDF8	Mycobacterium_phage	68.3	3.2e-18
SPJ42029.1|2711401_2711827_+	hypothetical protein	NA	NA	NA	NA	NA
SPJ42030.1|2711912_2713262_-	Transposase, Mutator family	NA	A0A218MNI5	uncultured_virus	36.6	1.4e-34
SPJ42031.1|2713404_2713521_-	short chain dehydrogenase	NA	NA	NA	NA	NA
SPJ42032.1|2713513_2714740_-	Multidrug resistance ABC transporter ATP-binding/permease protein BmrA	NA	W8CYL7	Bacillus_phage	27.0	5.6e-35
SPJ42033.1|2714783_2715167_-	hypothetical protein	NA	NA	NA	NA	NA
SPJ42034.1|2715448_2715964_+|terminase	Putative ATPase subunit of terminase (gpP-like)	terminase	NA	NA	NA	NA
SPJ42035.1|2716016_2716829_+	Integrase core domain protein	NA	A0A1B1P773	Bacillus_phage	33.7	2.7e-38
