The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LT985474	Listeria monocytogenes isolate JF5203_1 genome assembly, chromosome: 1	2900890	132410	138584	2900890		Listeria_phage(33.33%)	12	NA	NA
SPE79893.1|132410_132872_-	toxin	NA	A0A059T7S0	Listeria_phage	47.9	3.1e-31
SPE79894.1|132868_133204_-	repressor C1	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
SPE79895.1|133420_133849_+	hypothetical protein	NA	NA	NA	NA	NA
SPE79896.1|133860_134277_+	transcriptional regulator	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
SPE79897.1|134556_134946_+	antigen B	NA	NA	NA	NA	NA
SPE79898.1|134958_135528_+	minor structural protein	NA	A0A097PBF4	Streptococcus_pyogenes_phage	68.0	3.0e-23
SPE79899.1|135517_135817_+	hypothetical protein	NA	NA	NA	NA	NA
SPE79900.1|135831_136407_+	hypothetical protein	NA	NA	NA	NA	NA
SPE79901.1|136421_136901_+	hypothetical protein	NA	NA	NA	NA	NA
SPE79902.1|136897_137434_+	hypothetical protein	NA	NA	NA	NA	NA
SPE79903.1|137452_137875_+	hypothetical protein	NA	Q2I8E7	Bacillus_phage	47.1	8.6e-28
SPE79904.1|137855_138584_+	N-acetylmuramoyl-L-alanine amidase	NA	E5DV68	Deep-sea_thermophilic_phage	48.0	9.6e-35
>prophage 2
LT985474	Listeria monocytogenes isolate JF5203_1 genome assembly, chromosome: 1	2900890	1263671	1320528	2900890	protease,integrase,tRNA	Bacillus_virus(16.67%)	56	1272637:1272653	1307829:1307845
SPE81016.1|1263671_1264811_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
SPE81017.1|1264890_1265286_-	transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
SPE81018.1|1265436_1265652_+	transcriptional regulator	NA	NA	NA	NA	NA
SPE81019.1|1265775_1266309_+	hypothetical protein	NA	NA	NA	NA	NA
SPE81020.1|1266324_1266990_+	hypothetical protein	NA	NA	NA	NA	NA
SPE81021.1|1267251_1268190_+	hypothetical protein	NA	NA	NA	NA	NA
SPE81022.1|1268304_1269588_+	trigger factor	NA	NA	NA	NA	NA
SPE81023.1|1269772_1271032_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
SPE81024.1|1271150_1271717_+	type I signal peptidase	NA	NA	NA	NA	NA
SPE81025.1|1271751_1272321_+	type I signal peptidase	NA	NA	NA	NA	NA
SPE81026.1|1272422_1272965_+	type I signal peptidase	NA	NA	NA	NA	NA
1272637:1272653	attL	GAAAAGAATACATCAAG	NA	NA	NA	NA
SPE81027.1|1272974_1273838_+	ribosomal biogenesis GTPase	NA	NA	NA	NA	NA
SPE81028.1|1273834_1274620_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
SPE81029.1|1274753_1275614_+	DNA processing protein DprA	NA	NA	NA	NA	NA
SPE81030.1|1275886_1277965_+	DNA topoisomerase I	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
SPE81031.1|1278027_1279332_+|tRNA	tRNA (uracil-5-)-methyltransferase Gid	tRNA	NA	NA	NA	NA
SPE81032.1|1279614_1280517_+|integrase	integrase/recombinase	integrase	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
SPE81033.1|1280537_1281077_+|protease	ATP-dependent protease peptidase subunit	protease	NA	NA	NA	NA
SPE81034.1|1281090_1282500_+|protease	ATP-dependent protease ATP-binding subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
SPE81035.1|1282520_1283300_+	transcriptional repressor CodY	NA	NA	NA	NA	NA
SPE81036.1|1283402_1283822_+	Putative esterase	NA	NA	NA	NA	NA
SPE81037.1|1283844_1284156_+	hypothetical protein	NA	NA	NA	NA	NA
SPE81038.1|1284158_1285031_+	LacX protein	NA	NA	NA	NA	NA
SPE81039.1|1285072_1285669_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SPE81040.1|1285826_1286234_+	CoA-binding protein	NA	NA	NA	NA	NA
SPE81041.1|1286414_1288382_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	5.1e-123
SPE81042.1|1288378_1290838_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.8	1.1e-101
SPE81043.1|1290920_1291388_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
SPE81044.1|1292014_1293841_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
SPE81045.1|1293873_1295760_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
SPE81046.1|1295972_1296671_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
SPE81047.1|1296903_1298580_+	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SPE81048.1|1298706_1299624_+|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
SPE81049.1|1299745_1299979_+	host factor-1 protein	NA	NA	NA	NA	NA
SPE81050.1|1300089_1301313_+	GTPase HflX	NA	NA	NA	NA	NA
SPE81051.1|1301305_1302532_+	aluminum resistance protein	NA	NA	NA	NA	NA
SPE81052.1|1302733_1303102_+	glutamine synthetase repressor	NA	NA	NA	NA	NA
SPE81053.1|1303172_1304507_+	glutamine synthetase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
SPE81054.1|1304650_1305946_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	1.1e-147
SPE81055.1|1305979_1306504_-	N-acetyltransferase	NA	NA	NA	NA	NA
SPE81056.1|1306534_1307149_-	LexA family transcriptional regulator	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
SPE81057.1|1307305_1307635_+	cell division suppressor	NA	NA	NA	NA	NA
SPE81058.1|1307728_1307956_+	hypothetical protein	NA	NA	NA	NA	NA
1307829:1307845	attR	GAAAAGAATACATCAAG	NA	NA	NA	NA
SPE81059.1|1308102_1310097_+	transketolase	NA	NA	NA	NA	NA
SPE81060.1|1310317_1310557_+	hypothetical protein	NA	NA	NA	NA	NA
SPE81061.1|1310605_1311337_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
SPE81062.1|1311358_1311865_-	chromosome partitioning protein ParB	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
SPE81063.1|1311874_1313179_-	phosphoadenosine phosphosulfate sulfurtransferase	NA	A0A220GKF8	Streptococcus_phage	51.9	4.7e-133
SPE81064.1|1313168_1314368_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	5.3e-91
SPE81065.1|1314351_1314726_-	hypothetical protein	NA	NA	NA	NA	NA
SPE81066.1|1315018_1315747_+	uridylate kinase	NA	NA	NA	NA	NA
SPE81067.1|1315746_1316304_+	ribosome recycling factor	NA	NA	NA	NA	NA
SPE81068.1|1316534_1317293_+	UDP pyrophosphate synthase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
SPE81069.1|1317306_1318095_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
SPE81070.1|1318109_1319252_+	1-deoxy-D-xylulose 5-phosphate reductoisomerase	NA	NA	NA	NA	NA
SPE81071.1|1319265_1320528_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 3
LT985474	Listeria monocytogenes isolate JF5203_1 genome assembly, chromosome: 1	2900890	1813462	1821748	2900890		Synechococcus_phage(33.33%)	8	NA	NA
SPE81519.1|1813462_1814029_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	36.4	8.3e-26
SPE81520.1|1814025_1815075_-	phosphoribosylaminoimidazole synthetase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
SPE81521.1|1815093_1816521_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	34.6	1.1e-53
SPE81522.1|1816505_1818725_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
SPE81523.1|1818717_1819401_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
SPE81524.1|1819404_1819650_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
SPE81525.1|1819661_1820375_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
SPE81526.1|1820455_1821748_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 4
LT985474	Listeria monocytogenes isolate JF5203_1 genome assembly, chromosome: 1	2900890	2497002	2504847	2900890		Streptococcus_phage(50.0%)	7	NA	NA
SPE82166.1|2497002_2497974_-	sporulation regulator WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
SPE82167.1|2497981_2498950_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.3	3.9e-68
SPE82168.1|2498951_2499827_-	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
SPE82169.1|2499934_2501665_-	phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	53.3	5.6e-174
SPE82170.1|2501706_2502699_-	aldose 1-epimerase	NA	NA	NA	NA	NA
SPE82171.1|2502784_2503768_-	UDP-glucose 4-epimerase	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
SPE82172.1|2503887_2504847_-	thioredoxin reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
