The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
LT985475	Listeria monocytogenes isolate JF5861 complete genome genome assembly, chromosome: 1	2913696	123377	129904	2913696	tail	Listeria_phage(33.33%)	10	NA	NA
SPE82740.1|123377_123839_-	toxin	NA	A0A059T7S0	Listeria_phage	47.9	3.1e-31
SPE82741.1|123835_124171_-	repressor C1	NA	A0A2H4JAR9	uncultured_Caudovirales_phage	52.5	4.0e-20
SPE82743.1|124387_124816_+	hypothetical protein	NA	NA	NA	NA	NA
SPE82744.1|124827_125244_+	transcriptional regulator	NA	A8ASQ1	Listeria_phage	38.6	1.3e-20
SPE82746.1|125523_125913_+	antigen B	NA	NA	NA	NA	NA
SPE82748.1|125925_126438_+	antigen A	NA	A0A097PBF4	Streptococcus_pyogenes_phage	62.7	1.2e-47
SPE82750.1|126485_126788_+	hypothetical protein	NA	NA	NA	NA	NA
SPE82752.1|126829_127234_+	hypothetical protein	NA	NA	NA	NA	NA
SPE82754.1|127220_129089_+|tail	phage tail protein	tail	A0A097PAU2	Streptococcus_pyogenes_phage	45.8	3.5e-20
SPE82755.1|129085_129904_+|tail	phage tail family protein	tail	A0A2H4JAE4	uncultured_Caudovirales_phage	34.9	1.7e-40
>prophage 2
LT985475	Listeria monocytogenes isolate JF5861 complete genome genome assembly, chromosome: 1	2913696	1272460	1329312	2913696	protease,tRNA,integrase	Bacillus_virus(16.67%)	56	1281426:1281442	1316613:1316629
SPE84479.1|1272460_1273600_-|protease	PrsW family intramembrane metalloprotease	protease	NA	NA	NA	NA
SPE84481.1|1273679_1274075_-	transcriptional regulator	NA	A9D9J6	Lactobacillus_prophage	57.4	1.3e-14
SPE84483.1|1274225_1274441_+	transcriptional regulator	NA	NA	NA	NA	NA
SPE84485.1|1274564_1275098_+	hypothetical protein	NA	NA	NA	NA	NA
SPE84487.1|1275113_1275779_+	hypothetical protein	NA	NA	NA	NA	NA
SPE84488.1|1276040_1276979_+	hypothetical protein	NA	NA	NA	NA	NA
SPE84490.1|1277093_1278377_+	trigger factor	NA	NA	NA	NA	NA
SPE84492.1|1278561_1279821_+|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	63.2	1.4e-145
SPE84494.1|1279939_1280506_+	type I signal peptidase	NA	NA	NA	NA	NA
SPE84496.1|1280540_1281110_+	type I signal peptidase	NA	NA	NA	NA	NA
SPE84498.1|1281211_1281754_+	type I signal peptidase	NA	NA	NA	NA	NA
1281426:1281442	attL	GAAAAGAATACATCAAG	NA	NA	NA	NA
SPE84500.1|1281763_1282627_+	ribosomal biogenesis GTPase	NA	NA	NA	NA	NA
SPE84501.1|1282623_1283409_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	37.6	6.7e-26
SPE84503.1|1283542_1284403_+	DNA processing protein DprA	NA	NA	NA	NA	NA
SPE84506.1|1284675_1286754_+	DNA topoisomerase I	NA	A0A1V0SB35	Catovirus	37.5	5.4e-107
SPE84508.1|1286816_1288121_+|tRNA	tRNA (uracil-5-)-methyltransferase Gid	tRNA	NA	NA	NA	NA
SPE84510.1|1288403_1289306_+|integrase	integrase/recombinase	integrase	A0A142K7N4	Mycobacterium_phage	29.5	1.8e-14
SPE84512.1|1289326_1289866_+|protease	ATP-dependent protease peptidase subunit	protease	NA	NA	NA	NA
SPE84514.1|1289879_1291289_+|protease	ATP-dependent protease ATP-binding subunit HslU	protease	W6AS21	Erwinia_phage	27.8	7.5e-44
SPE84516.1|1291309_1292089_+	transcriptional repressor CodY	NA	NA	NA	NA	NA
SPE84518.1|1292191_1292611_+	Putative esterase	NA	NA	NA	NA	NA
SPE84520.1|1292633_1292945_+	hypothetical protein	NA	NA	NA	NA	NA
SPE84522.1|1292947_1293820_+	LacX protein	NA	NA	NA	NA	NA
SPE84524.1|1293861_1294458_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
SPE84526.1|1294615_1295023_+	CoA-binding protein	NA	NA	NA	NA	NA
SPE84527.1|1295203_1297171_+	DNA topoisomerase IV subunit B	NA	G3M9Z3	Bacillus_virus	42.5	8.7e-123
SPE84530.1|1297167_1299627_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	31.8	1.1e-101
SPE84532.1|1299709_1300177_+	S-ribosylhomocysteinase	NA	NA	NA	NA	NA
SPE84534.1|1300804_1302625_+	LPXTG cell wall anchor domain-containing protein	NA	NA	NA	NA	NA
SPE84536.1|1302657_1304544_-	acetyltransferase	NA	B5WZU0	Pseudomonas_phage	32.2	3.8e-43
SPE84538.1|1304756_1305455_+	glycerophosphodiester phosphodiesterase	NA	A0A0S2MYI4	Enterococcus_phage	31.9	6.4e-12
SPE84540.1|1305687_1307364_+	glycerol-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
SPE84542.1|1307490_1308408_+|tRNA	tRNA delta(2)-isopentenylpyrophosphate transferase	tRNA	NA	NA	NA	NA
SPE84544.1|1308529_1308763_+	host factor-1 protein	NA	NA	NA	NA	NA
SPE84545.1|1308873_1310097_+	GTPase HflX	NA	NA	NA	NA	NA
SPE84546.1|1310089_1311316_+	aluminum resistance protein	NA	NA	NA	NA	NA
SPE84548.1|1311517_1311886_+	glutamine synthetase repressor	NA	NA	NA	NA	NA
SPE84550.1|1311956_1313291_+	glutamine synthetase	NA	A0A1V0SJ53	Klosneuvirus	26.4	2.0e-06
SPE84552.1|1313434_1314730_+	arsenic transporter	NA	A0A2H4PQU3	Staphylococcus_phage	62.6	2.5e-147
SPE84554.1|1314763_1315288_-	N-acetyltransferase	NA	NA	NA	NA	NA
SPE84556.1|1315318_1315933_-	LexA family transcriptional regulator	NA	A0A1B2APZ1	Phage_Wrath	62.1	9.3e-15
SPE84558.1|1316089_1316419_+	cell division suppressor	NA	NA	NA	NA	NA
SPE84560.1|1316512_1316740_+	hypothetical protein	NA	NA	NA	NA	NA
1316613:1316629	attR	GAAAAGAATACATCAAG	NA	NA	NA	NA
SPE84561.1|1316886_1318881_+	transketolase	NA	NA	NA	NA	NA
SPE84563.1|1319101_1319341_+	hypothetical protein	NA	NA	NA	NA	NA
SPE84565.1|1319389_1320121_-	class I SAM-dependent methyltransferase	NA	A0A1X9I6N4	Streptococcus_phage	58.0	2.3e-81
SPE84567.1|1320142_1320649_-	chromosome partitioning protein ParB	NA	A0A220GKT8	Streptococcus_phage	66.7	1.4e-56
SPE84569.1|1320658_1321963_-	phosphoadenosine phosphosulfate sulfurtransferase	NA	A0A220GKF8	Streptococcus_phage	52.1	1.2e-133
SPE84571.1|1321952_1323152_-	helicase SNF2	NA	L0P6E9	Lactobacillus_phage	46.6	5.3e-91
SPE84573.1|1323135_1323510_-	hypothetical protein	NA	NA	NA	NA	NA
SPE84575.1|1323802_1324531_+	uridylate kinase	NA	NA	NA	NA	NA
SPE84577.1|1324530_1325088_+	ribosome recycling factor	NA	NA	NA	NA	NA
SPE84579.1|1325318_1326077_+	UDP pyrophosphate synthase	NA	R9W0U9	Flavobacterium_phage	42.1	4.4e-22
SPE84581.1|1326090_1326879_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
SPE84583.1|1326893_1328036_+	1-deoxy-D-xylulose 5-phosphate reductoisomerase	NA	NA	NA	NA	NA
SPE84585.1|1328049_1329312_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
>prophage 3
LT985475	Listeria monocytogenes isolate JF5861 complete genome genome assembly, chromosome: 1	2913696	1825019	1833305	2913696		Prochlorococcus_phage(33.33%)	8	NA	NA
SPE85479.1|1825019_1825586_-	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	38.5	2.8e-26
SPE85481.1|1825582_1826632_-	phosphoribosylaminoimidazole synthetase	NA	Q58MH8	Prochlorococcus_phage	44.4	3.2e-63
SPE85483.1|1826650_1828078_-	amidophosphoribosyltransferase	NA	A0A1B1ISH6	uncultured_Mediterranean_phage	31.9	1.4e-53
SPE85485.1|1828062_1830282_-	phosphoribosylformylglycinamidine synthase II	NA	A6N228	Microbacterium_phage	40.8	6.5e-159
SPE85487.1|1830274_1830958_-	phosphoribosylformylglycinamidine synthase I	NA	NA	NA	NA	NA
SPE85489.1|1830961_1831207_-	phosphoribosylformylglycinamidine synthase subunit PurS	NA	NA	NA	NA	NA
SPE85490.1|1831218_1831932_-	phosphoribosylaminoimidazole-succinocarboxamide synthase	NA	A0A0E3F9V5	Synechococcus_phage	38.3	2.0e-40
SPE85492.1|1832012_1833305_-	adenylosuccinate lyase	NA	A0A1B3B081	Gordonia_phage	33.0	2.5e-17
>prophage 4
LT985475	Listeria monocytogenes isolate JF5861 complete genome genome assembly, chromosome: 1	2913696	2520298	2528143	2913696		Streptococcus_phage(50.0%)	7	NA	NA
SPE86602.1|2520298_2521270_-	sporulation regulator WhiA	NA	Q7AWZ3	Streptococcus_phage	39.4	5.2e-52
SPE86604.1|2521277_2522246_-	YvcK family protein	NA	A1IMD5	Streptococcus_phage	43.6	1.8e-68
SPE86606.1|2522247_2523123_-	RNase adaptor protein RapZ	NA	A0A0R8VB27	Thermobifida_phage	29.7	1.9e-08
SPE86608.1|2523230_2524961_-	phosphoglucomutase	NA	A0A1X9I671	Streptococcus_phage	53.1	9.5e-174
SPE86610.1|2525002_2525995_-	aldose 1-epimerase	NA	NA	NA	NA	NA
SPE86612.1|2526080_2527064_-	UDP-glucose 4-epimerase	NA	A0A2K9L5H6	Tupanvirus	38.1	4.0e-52
SPE86614.1|2527183_2528143_-	thioredoxin reductase	NA	G3MA85	Bacillus_virus	53.7	2.0e-88
