The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	173008	184792	2041494		Streptococcus_phage(72.73%)	13	NA	NA
QBK27406.1|173008_173656_-	replication initiator protein A	NA	A0A2P0VK56	Streptococcus_phage	33.7	7.0e-13
QBK27407.1|173764_174283_-	ClbS/DfsB family four-helix bundle protein	NA	NA	NA	NA	NA
QBK27408.1|174509_175379_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	76.1	2.7e-116
QBK27409.1|175381_175699_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	60.0	2.9e-28
QBK27410.1|175738_176629_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	51.7	4.9e-73
QBK27411.1|176625_177264_-	dTMP kinase	NA	M1PSC7	Streptococcus_phage	68.1	1.3e-75
QBK27412.1|177379_178177_-	pyrroline-5-carboxylate reductase	NA	A0A1X9I6T5	Streptococcus_phage	50.6	2.7e-59
QBK27413.1|178180_179443_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	64.5	2.5e-139
QBK27414.1|179452_180583_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	58.4	1.9e-114
QBK27415.1|180662_182546_-	MBL fold metallo-hydrolase	NA	I2E8W4	Clostridium_phage	24.3	2.0e-12
QBK27416.1|182548_183436_-	RluA family pseudouridine synthase	NA	A0A2H4UV25	Bodo_saltans_virus	27.5	6.5e-09
QBK27417.1|183425_183887_-	signal peptidase II	NA	NA	NA	NA	NA
QBK27418.1|183883_184792_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	27.7	3.1e-06
>prophage 2
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	689282	695649	2041494	transposase	Escherichia_phage(42.86%)	8	NA	NA
QBK27846.1|689282_689798_-	hypothetical protein	NA	S5VTD3	Leptospira_phage	29.7	1.7e-06
QBK29074.1|689734_690133_-|transposase	transposase	transposase	NA	NA	NA	NA
QBK27847.1|690256_691108_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.4	1.5e-26
QBK27848.1|691173_692223_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.5	1.8e-71
QBK27849.1|692235_692829_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	H9NC63	Sphingomonas_phage	33.1	3.9e-10
QBK27850.1|692829_693699_-	glucose-1-phosphate thymidylyltransferase	NA	K7QKA7	Escherichia_phage	64.6	2.2e-102
QBK27851.1|693776_694382_-	UDP-galactopuranose mutase	NA	E4ZFQ1	Streptococcus_phage	62.6	1.7e-69
QBK27852.1|694410_695649_-	nucleotide sugar dehydrogenase	NA	M1I6D5	Acanthocystis_turfacea_Chlorella_virus	49.9	3.3e-104
>prophage 3
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	838172	890364	2041494	tRNA,bacteriocin,protease	Staphylococcus_phage(25.0%)	54	NA	NA
QBK27995.1|838172_838850_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBK27996.1|838846_839410_-	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
QBK27997.1|839419_840013_-	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
QBK27998.1|840416_841517_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	38.2	3.8e-51
QBK27999.1|841501_842137_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	46.9	2.2e-43
QBK28000.1|842156_843362_+	bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	7.7e-106
QBK28001.1|843362_843857_+	6,7-dimethyl-8-ribityllumazine synthase	NA	A0A2H4PQS3	Staphylococcus_phage	53.0	1.5e-39
QBK28002.1|844155_846105_-	DNA mismatch repair protein HexB	NA	A0A1B2LRQ5	Wolbachia_phage	32.1	1.0e-70
QBK28003.1|846461_846902_+	response regulator transcription factor	NA	NA	NA	NA	NA
QBK28004.1|846898_847357_+	DUF3021 domain-containing protein	NA	NA	NA	NA	NA
QBK28005.1|847666_848929_+	divalent metal cation transporter	NA	NA	NA	NA	NA
QBK29076.1|849109_849196_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
QBK28006.1|849221_849692_-	ribonucleotide reductase assembly protein NrdI	NA	NA	NA	NA	NA
QBK28007.1|849769_850351_-	ABC transporter permease	NA	NA	NA	NA	NA
QBK28008.1|850354_851641_-	response regulator transcription factor	NA	NA	NA	NA	NA
QBK29077.1|851652_853323_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	25.2	1.1e-09
QBK28009.1|853300_853915_-	DUF624 domain-containing protein	NA	NA	NA	NA	NA
QBK28010.1|854049_854619_+	Trep_Strep domain-containing protein	NA	NA	NA	NA	NA
QBK28011.1|854648_855341_-	ABC transporter permease	NA	NA	NA	NA	NA
QBK28012.1|855342_856404_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.7	6.7e-29
QBK28013.1|856396_857770_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
QBK28014.1|857869_858724_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBK28015.1|858877_859708_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBK28016.1|859811_860408_-	AzlC protein	NA	NA	NA	NA	NA
QBK28017.1|860617_861847_-	MFS transporter	NA	NA	NA	NA	NA
QBK28018.1|861915_862581_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBK28019.1|862592_863270_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBK28020.1|863291_863525_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28021.1|863815_864679_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QBK28022.1|865073_866246_-	nucleotide sugar dehydrogenase	NA	O41091	Paramecium_bursaria_Chlorella_virus	43.8	2.1e-79
QBK28023.1|866258_867014_-	PIG-L family deacetylase	NA	NA	NA	NA	NA
QBK28024.1|867019_867448_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28025.1|867796_869413_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.5	4.6e-21
QBK28026.1|869422_870376_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
QBK28027.1|870368_871583_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
QBK28028.1|874175_875186_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	41.6	9.8e-62
QBK28029.1|875175_875613_-	ribosomal-protein-alanine N-acetyltransferase	NA	NA	NA	NA	NA
QBK28030.1|875609_876293_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	tRNA	NA	NA	NA	NA
QBK28031.1|876470_876656_+|bacteriocin	fratricide two-peptide bacteriocin subunit CibA	bacteriocin	NA	NA	NA	NA
QBK28032.1|876657_876810_+|bacteriocin	fratricide two-peptide bacteriocin subunit CibB	bacteriocin	NA	NA	NA	NA
QBK28033.1|876803_877001_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28034.1|877022_877244_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28035.1|877627_877861_+	DUF1447 family protein	NA	NA	NA	NA	NA
QBK28036.1|879931_881845_-|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
QBK28037.1|881854_882337_-	NUDIX domain-containing protein	NA	NA	NA	NA	NA
QBK28038.1|882450_883572_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
QBK28039.1|886108_886387_-	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	50.5	2.5e-20
QBK28040.1|886371_886671_-	hypothetical protein	NA	M1Q0Z8	Streptococcus_phage	51.4	2.9e-14
QBK28041.1|887069_887267_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28042.1|887745_888504_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28043.1|888470_888857_-	argininosuccinate lyase	NA	NA	NA	NA	NA
QBK28044.1|888879_889782_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28045.1|889800_889983_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28046.1|889989_890364_-|bacteriocin	SPH_0224 family bacteriocin-like peptide	bacteriocin	NA	NA	NA	NA
>prophage 4
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	962190	973646	2041494		Cyanophage(33.33%)	8	NA	NA
QBK28112.1|962190_962736_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.0	7.4e-24
QBK28113.1|962732_963755_-	phosphoribosylformylglycinamidine cyclo-ligase	NA	A0A1D7SE90	Cyanophage	43.9	1.6e-64
QBK28114.1|963791_965234_-	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	35.4	2.6e-55
QBK28115.1|965326_969052_-	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	25.8	2.1e-37
QBK29080.1|969108_969252_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	NA	NA	NA	NA
QBK28116.1|969253_970003_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A1D7SE76	Cyanophage	39.7	1.9e-41
QBK28117.1|970130_971480_-	HlyD family secretion protein	NA	NA	NA	NA	NA
QBK28118.1|971492_973646_-	peptide cleavage/export ABC transporter	NA	W8CYL7	Bacillus_phage	28.0	1.0e-44
>prophage 5
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	1001422	1061221	2041494	tRNA,transposase,holin,protease	Streptococcus_phage(38.89%)	54	NA	NA
QBK28137.1|1001422_1003381_-|protease	ATP-dependent zinc metalloprotease FtsH	protease	H8ZJI5	Ostreococcus_tauri_virus	45.8	3.2e-109
QBK28138.1|1003396_1003939_-	hypoxanthine phosphoribosyltransferase	NA	A0A1V0SEQ1	Hokovirus	26.2	4.4e-08
QBK28139.1|1003942_1005220_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
QBK28140.1|1005216_1006485_-	serine hydrolase	NA	NA	NA	NA	NA
QBK29082.1|1006604_1006904_-	septum formation initiator family protein	NA	NA	NA	NA	NA
QBK28141.1|1006970_1007237_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
QBK28142.1|1007294_1010804_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
QBK28143.1|1010804_1011374_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
QBK28144.1|1011444_1012560_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
QBK28145.1|1012643_1012838_-	DUF951 family protein	NA	NA	NA	NA	NA
QBK28146.1|1012902_1014039_-	DNA polymerase III subunit beta	NA	A0A1L2BX73	Bacteriophage	26.2	8.5e-14
QBK28147.1|1014197_1015559_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
QBK28148.1|1015771_1016530_-	ParB/RepB/Spo0J family partition protein	NA	S5VTK0	Leptospira_phage	32.5	5.2e-15
QBK28149.1|1016587_1017781_-|protease	serine protease	protease	A0A1B1IT49	uncultured_Mediterranean_phage	26.1	1.5e-16
QBK28150.1|1017951_1018431_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
QBK28151.1|1018712_1018838_+	competence-stimulating peptide ComC	NA	NA	NA	NA	NA
QBK28152.1|1018858_1020184_+	sensor histidine kinase	NA	NA	NA	NA	NA
QBK28153.1|1020180_1020933_+	response regulator transcription factor	NA	NA	NA	NA	NA
QBK28154.1|1021175_1021718_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QBK28155.1|1023116_1023431_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28156.1|1023531_1026084_-	ABC transporter permease	NA	NA	NA	NA	NA
QBK28157.1|1026145_1027768_-	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	26.2	3.4e-48
QBK28158.1|1027973_1028999_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
QBK28159.1|1030678_1031776_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
QBK28160.1|1031778_1032147_-	S4 domain-containing protein YaaA	NA	A0A1X9I5V8	Streptococcus_phage	57.3	7.0e-18
QBK28161.1|1032305_1033556_+	insulinase family protein	NA	A0A1X9I714	Streptococcus_phage	42.3	3.5e-93
QBK28162.1|1033552_1034836_+	insulinase family protein	NA	A0A167R9K4	Powai_lake_megavirus	23.6	7.1e-17
QBK28163.1|1034868_1035699_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QBK28164.1|1035709_1036255_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
QBK28165.1|1036251_1037079_+	energy-coupling factor transporter ATPase	NA	G9BWD6	Planktothrix_phage	32.9	2.8e-22
QBK28166.1|1037063_1037903_+	energy-coupling factor transporter ATPase	NA	A0A2K9L3Z8	Tupanvirus	29.8	1.0e-16
QBK28167.1|1037895_1038690_+	energy-coupling factor transporter transmembrane protein EcfT	NA	NA	NA	NA	NA
QBK28168.1|1038748_1039567_+	rod shape-determining protein MreC	NA	NA	NA	NA	NA
QBK28169.1|1039566_1040061_+	rod shape-determining protein MreD	NA	NA	NA	NA	NA
QBK28170.1|1040154_1041333_+	CHAP domain-containing protein	NA	NA	NA	NA	NA
QBK28171.1|1041556_1042336_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
QBK28172.1|1042401_1043442_+	elongation factor Ts	NA	NA	NA	NA	NA
QBK28173.1|1043687_1043975_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QBK28174.1|1044430_1044829_+|transposase	transposase	transposase	NA	NA	NA	NA
QBK29083.1|1044807_1044951_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28175.1|1045025_1045946_-	cysteine synthase A	NA	A0A1X9I5K7	Streptococcus_phage	80.7	1.3e-137
QBK28176.1|1046230_1046866_-	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	71.5	4.4e-76
QBK28177.1|1046921_1048220_+	DEAD/DEAH box helicase	NA	A0A1X9I5S6	Streptococcus_phage	66.6	9.3e-166
QBK28178.1|1048216_1048879_+	ComF family protein	NA	NA	NA	NA	NA
QBK28179.1|1048958_1049507_+	ribosome-associated translation inhibitor RaiA	NA	NA	NA	NA	NA
QBK28180.1|1051616_1052069_+	50S ribosomal protein L9	NA	NA	NA	NA	NA
QBK28181.1|1052112_1053465_+	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	61.3	6.3e-149
QBK28182.1|1053466_1053733_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28183.1|1053821_1055168_+|holin	choline binding-anchored murein hydrolase CbpD	holin	A0A2I6QR39	Streptococcus_phage	33.6	1.8e-07
QBK28184.1|1055674_1056436_+	ABC transporter permease	NA	NA	NA	NA	NA
QBK28185.1|1057481_1058210_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.2	1.0e-28
QBK28186.1|1058328_1058787_+	CtsR family transcriptional regulator	NA	NA	NA	NA	NA
QBK28187.1|1058788_1061077_+|protease	ATP-dependent Clp protease ATP-binding subunit	protease	A0A223W0B1	Agrobacterium_phage	40.7	4.0e-119
QBK28188.1|1061077_1061221_+|protease	Clp protease	protease	NA	NA	NA	NA
>prophage 6
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	1311507	1363579	2041494	tRNA,transposase,bacteriocin,protease	Streptococcus_phage(45.45%)	51	NA	NA
QBK28393.1|1311507_1312275_-|bacteriocin	bacteriocin-associated integral membrane family protein	bacteriocin	NA	NA	NA	NA
QBK28394.1|1312325_1314065_-|protease	serine protease	protease	A0A2H4PQH1	Staphylococcus_phage	39.5	4.2e-52
QBK28395.1|1314088_1316197_-	peptidase domain-containing ABC transporter	NA	F2Y302	Organic_Lake_phycodnavirus	31.9	6.0e-21
QBK28396.1|1316193_1317123_-	M50 family peptidase	NA	NA	NA	NA	NA
QBK28397.1|1317103_1317808_-	flavodoxin family protein	NA	NA	NA	NA	NA
QBK28398.1|1318157_1321148_-	type 2 lantipeptide synthetase LanM	NA	NA	NA	NA	NA
QBK28399.1|1321263_1321452_-|bacteriocin	two-peptide bacteriocin subunit PneA2	bacteriocin	NA	NA	NA	NA
QBK28400.1|1321458_1321683_-|bacteriocin	two-peptide bacteriocin subunit PneA1	bacteriocin	NA	NA	NA	NA
QBK28401.1|1321785_1321956_-	hypothetical protein	NA	NA	NA	NA	NA
QBK28402.1|1322147_1323011_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBK28403.1|1323125_1323263_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
QBK28404.1|1323393_1324014_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28405.1|1324099_1324543_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
QBK28406.1|1324532_1325051_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QBK28407.1|1325058_1326075_+	LytR family transcriptional regulator	NA	NA	NA	NA	NA
QBK28408.1|1326159_1327416_+	competence/damage-inducible protein A	NA	NA	NA	NA	NA
QBK28409.1|1327470_1328637_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.7	5.9e-119
QBK28410.1|1328943_1330314_+	MATE family efflux transporter	NA	NA	NA	NA	NA
QBK28411.1|1330689_1331646_+	N-acetylmuramoyl-L-alanine amidase family protein	NA	A0A1S5SE15	Streptococcus_phage	95.6	6.0e-154
QBK28412.1|1332004_1332178_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBK28413.1|1332128_1332371_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28414.1|1332416_1332776_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28415.1|1332904_1333330_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28416.1|1333737_1334532_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28417.1|1334535_1334733_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28418.1|1334719_1335274_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28419.1|1335332_1335593_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28420.1|1337351_1337960_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28421.1|1337952_1338363_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28422.1|1338373_1339789_+	cholesterol-dependent cytolysin pneumolysin	NA	NA	NA	NA	NA
QBK29092.1|1340148_1340238_+	DNA alkylation repair protein	NA	NA	NA	NA	NA
QBK28423.1|1340669_1341386_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QBK28424.1|1341401_1341497_+	single-stranded DNA-binding protein	NA	NA	NA	NA	NA
QBK28425.1|1342823_1343855_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	28.5	4.9e-16
QBK28426.1|1343920_1344283_+	DUF2200 domain-containing protein	NA	NA	NA	NA	NA
QBK28427.1|1344279_1344783_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
QBK28428.1|1344896_1345343_+	response regulator transcription factor	NA	NA	NA	NA	NA
QBK28429.1|1345348_1346023_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28430.1|1346183_1346375_+	cell wall-binding protein	NA	NA	NA	NA	NA
QBK28431.1|1346711_1347011_+	DUF4651 domain-containing protein	NA	NA	NA	NA	NA
QBK28432.1|1347007_1347325_+	thioredoxin	NA	NA	NA	NA	NA
QBK28433.1|1347340_1347967_+	DUF4479 domain-containing protein	NA	NA	NA	NA	NA
QBK28434.1|1348842_1349238_+	single-stranded DNA-binding protein	NA	A1EAD1	Streptococcus_phage	45.5	3.0e-27
QBK28435.1|1349393_1349678_+	co-chaperone GroES	NA	A0A221S2Y9	uncultured_virus	37.2	3.1e-05
QBK28436.1|1349693_1351316_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	56.1	2.3e-153
QBK28437.1|1351414_1352644_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.6	1.7e-217
QBK28438.1|1352803_1353010_+	transcriptional regulator	NA	NA	NA	NA	NA
QBK28439.1|1353363_1353897_-	DUF402 domain-containing protein	NA	NA	NA	NA	NA
QBK28440.1|1353985_1354762_-	recombination regulator RecX	NA	NA	NA	NA	NA
QBK28441.1|1354799_1356155_+	RNA methyltransferase	NA	E4ZFI6	Streptococcus_phage	33.7	5.3e-71
QBK28442.1|1363141_1363579_-|transposase	ISL3 family transposase	transposase	A0A1S5SBP9	Streptococcus_phage	91.2	1.9e-22
>prophage 7
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	1747278	1753056	2041494		Streptococcus_phage(50.0%)	9	NA	NA
QBK28802.1|1747278_1747773_+	N-acetyltransferase	NA	M1PSC3	Streptococcus_phage	50.9	2.1e-41
QBK28803.1|1747772_1748303_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	M1PFU9	Streptococcus_phage	54.3	1.4e-46
QBK28804.1|1748296_1748653_+	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	57.3	1.2e-33
QBK28805.1|1748810_1749611_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QBK28806.1|1749610_1750354_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	40.5	4.7e-29
QBK28807.1|1750419_1750656_+	DUF4059 family protein	NA	NA	NA	NA	NA
QBK28808.1|1750721_1751633_+	thioredoxin-disulfide reductase	NA	G3MA85	Bacillus_virus	51.8	4.5e-90
QBK28809.1|1751671_1752400_-	23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB	NA	NA	NA	NA	NA
QBK28810.1|1752444_1753056_-	peptide deformylase	NA	E3SLL2	Synechococcus_phage	42.4	4.9e-16
>prophage 8
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	1848083	1906986	2041494	holin,protease	Bacillus_phage(17.65%)	53	NA	NA
QBK28906.1|1848083_1848671_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBK28907.1|1848872_1849010_+	SapB/AmfS family lantipeptide	NA	NA	NA	NA	NA
QBK28908.1|1849161_1851798_+	lanthionine synthetase	NA	NA	NA	NA	NA
QBK28909.1|1851830_1853771_+	S9 family peptidase	NA	F2Y2S5	Organic_Lake_phycodnavirus	32.0	8.6e-06
QBK28910.1|1853767_1855375_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	22.4	6.0e-13
QBK28911.1|1855371_1856130_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.8	1.0e-23
QBK28912.1|1856132_1857452_+	FtsX-like permease family protein	NA	NA	NA	NA	NA
QBK28913.1|1857584_1857722_+	SapB/AmfS family lantipeptide	NA	NA	NA	NA	NA
QBK28914.1|1857901_1858081_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28915.1|1859629_1860328_+	N-acetylmannosamine-6-phosphate 2-epimerase	NA	NA	NA	NA	NA
QBK28916.1|1860351_1861275_+	cyclically-permuted mutarotase family protein	NA	NA	NA	NA	NA
QBK28917.1|1861356_1862985_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBK28918.1|1863049_1864045_+	ABC transporter permease	NA	NA	NA	NA	NA
QBK28919.1|1864061_1864913_+	ABC transporter permease	NA	NA	NA	NA	NA
QBK28920.1|1864925_1866908_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	5.3e-19
QBK28921.1|1866908_1868327_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28922.1|1868331_1868820_+	phosphatidylglycerophosphatase A	NA	G3MBC5	Bacillus_virus	53.3	4.9e-35
QBK28923.1|1869107_1869515_+	cytidine deaminase	NA	NA	NA	NA	NA
QBK28924.1|1871684_1872326_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	40.1	1.7e-19
QBK28925.1|1872338_1872509_+	hypothetical protein	NA	NA	NA	NA	NA
QBK28926.1|1873004_1874351_-	NADP-specific glutamate dehydrogenase	NA	NA	NA	NA	NA
QBK28927.1|1876335_1876914_+	iron permease	NA	NA	NA	NA	NA
QBK28928.1|1876970_1877213_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
QBK28929.1|1877308_1878244_-	bifunctional oligoribonuclease/PAP phosphatase NrnA	NA	NA	NA	NA	NA
QBK28930.1|1878347_1878791_+	flavodoxin	NA	A7KUZ7	Bacillus_phage	37.4	1.6e-08
QBK28931.1|1878906_1879173_+	chorismate mutase	NA	NA	NA	NA	NA
QBK28932.1|1879169_1879544_+	fluoride efflux transporter CrcB	NA	NA	NA	NA	NA
QBK28933.1|1879537_1879867_+	fluoride efflux transporter CrcB	NA	A0A2H4PQR0	Staphylococcus_phage	37.0	2.4e-09
QBK28934.1|1879985_1880333_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
QBK28935.1|1880500_1881307_-	sugar-phosphatase	NA	NA	NA	NA	NA
QBK28936.1|1881319_1882624_-	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	35.1	3.4e-30
QBK28937.1|1882695_1883073_+	DUF1934 domain-containing protein	NA	NA	NA	NA	NA
QBK28938.1|1883163_1883496_+	putative DNA-binding protein	NA	NA	NA	NA	NA
QBK28939.1|1883507_1885079_+	signal recognition particle protein	NA	NA	NA	NA	NA
QBK28940.1|1885273_1886593_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	35.3	4.1e-60
QBK28941.1|1886908_1887622_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
QBK28942.1|1887715_1888276_+	LemA family protein	NA	A0A1X9IGG1	Lactococcus_phage	32.5	1.1e-11
QBK28943.1|1888277_1889177_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
QBK28944.1|1889325_1890852_-	ABC-F family ATP-binding cassette domain-containing protein	NA	A0A2I4R674	Erysipelothrix_phage	24.0	1.3e-25
QBK28945.1|1891610_1892153_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
QBK28946.1|1892152_1892782_+	endonuclease III	NA	NA	NA	NA	NA
QBK28947.1|1892993_1893515_+	bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR	NA	NA	NA	NA	NA
QBK28948.1|1893533_1894457_+	aspartate carbamoyltransferase	NA	M1HGA5	Paramecium_bursaria_Chlorella_virus	31.7	5.1e-25
QBK28949.1|1894506_1895586_+	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.9	6.3e-59
QBK28950.1|1895898_1899075_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
QBK28951.1|1899349_1900159_-|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	30.3	9.1e-10
QBK28952.1|1900160_1900964_-|holin	phosphorylcholine transferase LicD	holin	A0A1V0SD50	Indivirus	27.1	5.3e-10
QBK28953.1|1900973_1902461_-	type IV teichoic acid flippase	NA	NA	NA	NA	NA
QBK28954.1|1902796_1903504_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
QBK28955.1|1903508_1904531_+	ribitol-5-phosphate dehydrogenase	NA	NA	NA	NA	NA
QBK28956.1|1904547_1905417_+|holin	choline kinase	holin	NA	NA	NA	NA
QBK28957.1|1905406_1906285_+	DMT family transporter	NA	NA	NA	NA	NA
QBK28958.1|1906296_1906986_+|holin	CTP--phosphocholine cytidylyltransferase	holin	G3MA50	Bacillus_virus	46.1	5.5e-08
>prophage 9
CP036529	Streptococcus pneumoniae strain 521 chromosome, complete genome	2041494	1940802	1950906	2041494		Bacillus_phage(25.0%)	11	NA	NA
QBK28988.1|1940802_1941354_-	phosphopantothenoylcysteine decarboxylase	NA	A0A1V0S7W6	Shearwaterpox_virus	36.1	3.1e-25
QBK28989.1|1941365_1942055_-	phosphopantothenate--cysteine ligase	NA	Q9HH70	Methanothermobacter_phage	31.6	5.0e-17
QBK28990.1|1942284_1943955_+	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
QBK28991.1|1944076_1944187_-	chlorohydrolase	NA	NA	NA	NA	NA
QBK28992.1|1944283_1945459_+	A/G-specific adenine glycosylase	NA	G3CB03	Aeropyrum_pernix_spindle-shaped_virus	29.8	8.8e-22
QBK28993.1|1945513_1946218_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	39.8	2.8e-39
QBK28994.1|1946210_1947560_+	cell wall metabolism sensor histidine kinase VicK	NA	W8CYF6	Bacillus_phage	34.6	1.8e-34
QBK28995.1|1947561_1948371_+	MBL fold metallo-hydrolase	NA	A0A0C5AFC1	Paenibacillus_phage	39.0	1.8e-34
QBK28996.1|1948401_1948704_+	antitoxin	NA	NA	NA	NA	NA
QBK28997.1|1948696_1948960_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A1S5S8E8	Streptococcus_phage	50.0	9.4e-17
QBK28998.1|1949028_1950906_+	restriction endonuclease	NA	A0A1V0SF91	Hokovirus	25.1	9.8e-15
