The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035504	Kocuria indica strain CE7 chromosome, complete genome	2809846	764466	773429	2809846		uncultured_virus(33.33%)	7	NA	NA
QBJ22561.1|764466_765444_+	ABC transporter permease	NA	A0A2H4IY97	uncultured_Caudovirales_phage	39.6	2.0e-59
QBJ21004.1|765436_766474_+	enterochelin ABC transporter permease	NA	NA	NA	NA	NA
QBJ21005.1|766470_767226_+	ATP-binding cassette domain-containing protein	NA	A0A2R8FG22	Brazilian_cedratvirus	28.5	3.3e-14
QBJ21006.1|767518_767815_+	co-chaperone GroES	NA	A0A221S4M3	uncultured_virus	46.3	1.5e-18
QBJ21007.1|767922_769506_+	chaperonin GroEL	NA	A0A219YK78	uncultured_virus	50.4	1.6e-138
QBJ21008.1|769737_771849_+	acyltransferase	NA	C6ZR20	Salmonella_phage	28.8	9.3e-30
QBJ22562.1|771932_773429_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	40.8	9.9e-95
>prophage 2
CP035504	Kocuria indica strain CE7 chromosome, complete genome	2809846	1605102	1654251	2809846	transposase,integrase,tRNA	Leptospira_phage(20.0%)	48	1618239:1618257	1654616:1654634
QBJ21611.1|1605102_1606182_-|tRNA	tRNA (adenine-N1)-methyltransferase	tRNA	NA	NA	NA	NA
QBJ21612.1|1606331_1607519_-	peptidase M50B family protein	NA	NA	NA	NA	NA
QBJ21613.1|1607591_1608488_+	PAC2 family protein	NA	NA	NA	NA	NA
QBJ21614.1|1608516_1609827_-	cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase	NA	A0A1V0SAQ2	Catovirus	26.2	2.9e-21
QBJ21615.1|1609939_1610773_-	undecaprenyl-diphosphate phosphatase	NA	NA	NA	NA	NA
QBJ21616.1|1610897_1611275_-	primosomal protein	NA	NA	NA	NA	NA
QBJ22640.1|1611362_1611560_+	hypothetical protein	NA	NA	NA	NA	NA
QBJ21617.1|1611573_1612758_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
QBJ21618.1|1612912_1614232_-	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
QBJ22641.1|1614446_1614950_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QBJ21619.1|1615205_1615652_-	pyridoxamine 5'-phosphate oxidase family protein	NA	NA	NA	NA	NA
QBJ21620.1|1615785_1616595_-	SOS response-associated peptidase	NA	A0A218MNF5	uncultured_virus	36.2	4.8e-11
QBJ21621.1|1616626_1617349_-	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
1618239:1618257	attL	CTCAGAAGTCCCAGTCCTC	NA	NA	NA	NA
QBJ21622.1|1618562_1619306_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
QBJ21623.1|1619302_1620580_-	hypothetical protein	NA	NA	NA	NA	NA
QBJ21624.1|1620576_1621389_-	hypothetical protein	NA	NA	NA	NA	NA
QBJ21625.1|1621369_1623241_-	ATPase	NA	NA	NA	NA	NA
QBJ21626.1|1625554_1626304_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
QBJ21627.1|1626327_1626888_+	NAD(P)H dehydrogenase	NA	NA	NA	NA	NA
QBJ21628.1|1626887_1628447_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
QBJ21629.1|1628443_1629814_+	FAD-dependent monooxygenase	NA	NA	NA	NA	NA
QBJ21630.1|1629810_1631577_+	2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase	NA	NA	NA	NA	NA
QBJ21631.1|1631573_1632494_+	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
QBJ21632.1|1632526_1633612_+	alkene reductase	NA	NA	NA	NA	NA
QBJ21633.1|1633608_1634724_+	hypothetical protein	NA	NA	NA	NA	NA
QBJ21634.1|1634762_1635245_+	Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
QBJ21635.1|1635378_1636528_+|transposase	IS3-like element ISPfr10 family transposase	transposase	S5WIU1	Leptospira_phage	37.5	6.6e-38
QBJ21636.1|1636593_1636773_+	hypothetical protein	NA	NA	NA	NA	NA
QBJ22642.1|1636755_1638063_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	71.3	3.6e-181
QBJ21637.1|1638624_1639872_+|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	42.1	2.8e-82
QBJ21638.1|1640056_1640680_-	4-phosphopantetheinyl transferase family protein	NA	NA	NA	NA	NA
QBJ21639.1|1640759_1641116_+	hypothetical protein	NA	NA	NA	NA	NA
QBJ22643.1|1641106_1642354_-|transposase	ISL3 family transposase	transposase	A0A2H4PDF8	Mycobacterium_phage	42.2	1.2e-72
QBJ21640.1|1642431_1643559_+	hypothetical protein	NA	A0A2K9L3I8	Tupanvirus	22.2	6.9e-08
QBJ21641.1|1643562_1643823_+	acyl carrier protein	NA	NA	NA	NA	NA
QBJ21642.1|1643879_1644254_+	cupin domain-containing protein	NA	NA	NA	NA	NA
QBJ21643.1|1644162_1645398_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
QBJ21644.1|1645394_1646060_+	transglutaminase family protein	NA	NA	NA	NA	NA
QBJ21645.1|1646076_1646850_+	maleate cis-trans isomerase	NA	NA	NA	NA	NA
QBJ22644.1|1646888_1647362_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QBJ21646.1|1647453_1648074_+	thioredoxin	NA	NA	NA	NA	NA
QBJ21647.1|1648070_1648559_+	nucleoside deaminase	NA	S4VYZ2	Pandoravirus	32.4	7.4e-07
QBJ21648.1|1648595_1648916_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
QBJ21649.1|1648956_1649391_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
QBJ21650.1|1649387_1650470_+	MFS transporter	NA	NA	NA	NA	NA
QBJ21651.1|1650699_1651587_+	polysaccharide deacetylase	NA	NA	NA	NA	NA
QBJ22645.1|1651741_1652892_-|transposase	IS3-like element ISPfr10 family transposase	transposase	S5WIU1	Leptospira_phage	37.5	8.6e-38
QBJ21652.1|1652982_1654251_-|integrase	site-specific integrase	integrase	A0A2P1CI94	Actinomyces_phage	37.6	3.5e-56
1654616:1654634	attR	CTCAGAAGTCCCAGTCCTC	NA	NA	NA	NA
>prophage 3
CP035504	Kocuria indica strain CE7 chromosome, complete genome	2809846	1850333	1888640	2809846	transposase,tRNA	Staphylococcus_phage(20.0%)	35	NA	NA
QBJ21800.1|1850333_1851641_-|tRNA	tyrosine--tRNA ligase	tRNA	A0A1S6UA79	Serratia_phage	38.3	2.9e-66
QBJ21801.1|1851654_1853970_-	AAA family ATPase	NA	NA	NA	NA	NA
QBJ21802.1|1854039_1854567_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	41.5	2.5e-24
QBJ21803.1|1854607_1855318_-	DNA-3-methyladenine glycosylase	NA	NA	NA	NA	NA
QBJ21804.1|1855314_1856760_-	argininosuccinate lyase	NA	NA	NA	NA	NA
QBJ21805.1|1856900_1858106_-	argininosuccinate synthase	NA	NA	NA	NA	NA
QBJ21806.1|1859904_1860336_+	ankyrin repeat domain-containing protein	NA	NA	NA	NA	NA
QBJ21807.1|1860445_1860940_-	arginine repressor	NA	NA	NA	NA	NA
QBJ21808.1|1860936_1861908_-	ornithine carbamoyltransferase	NA	NA	NA	NA	NA
QBJ21809.1|1861944_1863207_-	acetylornithine transaminase	NA	B5LJF5	Mycobacterium_phage	31.3	6.6e-07
QBJ21810.1|1863203_1864154_-	acetylglutamate kinase	NA	NA	NA	NA	NA
QBJ21811.1|1864164_1865370_-	bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ	NA	NA	NA	NA	NA
QBJ22664.1|1865414_1866464_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
QBJ21812.1|1866668_1867646_+	quinone oxidoreductase	NA	NA	NA	NA	NA
QBJ21813.1|1867839_1868073_-	hypothetical protein	NA	NA	NA	NA	NA
QBJ21814.1|1869188_1870154_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	33.9	8.5e-23
QBJ21815.1|1870146_1871394_-|transposase	IS256 family transposase	transposase	A0A220NQR7	Corynebacterium_phage	42.1	2.8e-82
QBJ21816.1|1871509_1872046_-|transposase	IS30 family transposase	transposase	NA	NA	NA	NA
QBJ21817.1|1872185_1872590_+	VOC family protein	NA	NA	NA	NA	NA
QBJ21818.1|1872994_1873804_-	ATP-binding protein	NA	NA	NA	NA	NA
QBJ21819.1|1873800_1875198_-|transposase	transposase	transposase	NA	NA	NA	NA
QBJ21820.1|1875205_1875802_-	recombinase family protein	NA	I1ZBD6	Salisaeta_icosahedral_phage	40.4	4.3e-25
QBJ21821.1|1875995_1876355_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QBJ21822.1|1877271_1877853_-	hypothetical protein	NA	A0A0R6PI79	Moraxella_phage	38.0	1.8e-23
QBJ21823.1|1877984_1878545_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QBJ21824.1|1878929_1879742_-	hypothetical protein	NA	NA	NA	NA	NA
QBJ21825.1|1879835_1880207_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
QBJ21826.1|1880555_1881572_-	hypothetical protein	NA	NA	NA	NA	NA
QBJ21827.1|1881798_1882416_+	LysE family translocator	NA	NA	NA	NA	NA
QBJ21828.1|1882498_1882762_+	hypothetical protein	NA	NA	NA	NA	NA
QBJ21829.1|1882766_1883099_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
QBJ21830.1|1883229_1883796_+	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	47.5	8.0e-29
QBJ21831.1|1884759_1884975_+	hypothetical protein	NA	NA	NA	NA	NA
QBJ22665.1|1885403_1886417_-|transposase	IS30 family transposase	transposase	Q9MBM9	Staphylococcus_prophage	35.6	4.0e-39
QBJ21832.1|1887254_1888640_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	31.1	9.7e-36
