assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004323735.1_ASM432373v1	CP036455	Streptomonospora sp. M2 chromosome, complete genome	1	15952-17089	1,1,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	Type I-E	GTGCTCCCCGCGCACGCGGGGATGGTCC,GTGCTCCCCGCGCACGCGGGGATGGTCCC,GTGCTCCCCGCGCACGCGGGGATGGTCCC	28,29,29	0	0	NA	NA	I-E:I-E:I-E	16,18,18	18	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	NA,NA	NA|NA	NA	NA|NA	NA	NA|691aa|up_7|CP036455.1_27_2100_+	PRK14086, dnaA, chromosomal replication initiator protein DnaA	NA|379aa|up_6|CP036455.1_4191_5328_+	PRK07761, PRK07761, DNA polymerase III subunit beta; Validated	NA|302aa|up_5|CP036455.1_5386_6292_+	PRK09599, PRK09599, NADP-dependent phosphogluconate dehydrogenase	NA|377aa|up_4|CP036455.1_6508_7639_+	PRK00064, recF, recombination protein F; Reviewed	NA|169aa|up_3|CP036455.1_7631_8138_+	PRK03195, PRK03195, DUF721 family protein	NA|646aa|up_2|CP036455.1_8534_10472_+	PRK05644, gyrB, DNA gyrase subunit B; Validated	NA|889aa|up_1|CP036455.1_10525_13192_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|549aa|up_0|CP036455.1_13462_15109_+	pfam12089, DUF3566, Transmembrane domain of unknown function (DUF3566)	cas3|984aa|down_0|CP036455.1_17176_20128_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|551aa|down_1|CP036455.1_20117_21770_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|223aa|down_2|CP036455.1_21766_22435_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|394aa|down_3|CP036455.1_22431_23613_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|234aa|down_4|CP036455.1_23621_24323_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|237aa|down_5|CP036455.1_24322_25033_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|318aa|down_6|CP036455.1_25043_25997_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|117aa|down_7|CP036455.1_25993_26344_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|268aa|down_8|CP036455.1_30701_31505_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|737aa|down_9|CP036455.1_31888_34099_+	pfam00931, NB-ARC, NB-ARC domain
GCA_004323735.1_ASM432373v1	CP036455	Streptomonospora sp. M2 chromosome, complete genome	2	26435-30498	2,2,2,3	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	Type I-E	GTGCTCCCCGCGCACGCGGGGATGGTCCC,GTGCTCCCCGCGCACGCGGGGATGGTCCC,GTGCTCCCCGCGCACGCGGGGATGGTCCC,GTGCTCCCCGCGCACGCGGGGATGGTCC	29,29,29,28	0	0	NA	NA	I-E:I-E:I-E:I-E	63,66,66,63	66	TypeI-E	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	NA,NA|169aa|down_4|CP036455.1_37269_37776_+,NA|124aa|down_5|CP036455.1_37818_38190_+,NA|256aa|down_6|CP036455.1_38262_39030_+,NA|168aa|down_7|CP036455.1_39069_39573_+,NA|129aa|down_9|CP036455.1_40325_40712_-	NA|889aa|up_9|CP036455.1_10525_13192_+	PRK05560, PRK05560, DNA gyrase subunit A; Validated	NA|549aa|up_8|CP036455.1_13462_15109_+	pfam12089, DUF3566, Transmembrane domain of unknown function (DUF3566)	cas3|984aa|up_7|CP036455.1_17176_20128_+	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	cas8e|551aa|up_6|CP036455.1_20117_21770_+	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cse2gr11|223aa|up_5|CP036455.1_21766_22435_+	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas7|394aa|up_4|CP036455.1_22431_23613_+	pfam09344, Cas_CT1975, CT1975-like protein	cas5|234aa|up_3|CP036455.1_23621_24323_+	cd09645, Cas5_I-E, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas6e|237aa|up_2|CP036455.1_24322_25033_+	pfam08798, CRISPR_assoc, CRISPR associated protein	cas1|318aa|up_1|CP036455.1_25043_25997_+	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas2|117aa|up_0|CP036455.1_25993_26344_+	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	NA|268aa|down_0|CP036455.1_30701_31505_-	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|737aa|down_1|CP036455.1_31888_34099_+	pfam00931, NB-ARC, NB-ARC domain	NA|560aa|down_2|CP036455.1_34125_35805_-	COG1887, TagB, Putative glycosyl/glycerophosphate transferases involved in teichoic acid biosynthesis TagF/TagB/EpsJ/RodC [Cell envelope biogenesis, outer membrane]	NA|274aa|down_3|CP036455.1_36233_37055_+	pfam04672, Methyltransf_19, S-adenosyl methyltransferase	NA|169aa|down_4|CP036455.1_37269_37776_+	NA	NA|124aa|down_5|CP036455.1_37818_38190_+	NA	NA|256aa|down_6|CP036455.1_38262_39030_+	NA	NA|168aa|down_7|CP036455.1_39069_39573_+	NA	NA|127aa|down_8|CP036455.1_39823_40204_-	pfam18029, Glyoxalase_6, Glyoxalase-like domain	NA|129aa|down_9|CP036455.1_40325_40712_-	NA
GCA_004323735.1_ASM432373v1	CP036455	Streptomonospora sp. M2 chromosome, complete genome	3	492671-492764	3	CRISPRCasFinder	no	WYL	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	Unclear	CGGGTCGGGTGCTCGCCGGTGGC	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	NA|121aa|up_7|CP036455.1_482218_482581_-,NA|296aa|up_6|CP036455.1_482789_483677_+,NA|33aa|down_5|CP036455.1_498441_498540_+	NA|255aa|up_9|CP036455.1_477880_478645_+	PRK04537, PRK04537, ATP-dependent RNA helicase RhlB; Provisional	WYL|833aa|up_8|CP036455.1_479673_482172_-	pfam13625, Helicase_C_3, Helicase conserved C-terminal domain	NA|121aa|up_7|CP036455.1_482218_482581_-	NA	NA|296aa|up_6|CP036455.1_482789_483677_+	NA	NA|254aa|up_5|CP036455.1_483677_484439_-	TIGR03083, TIGR03083, uncharacterized Actinobacterial protein TIGR03083	NA|139aa|up_4|CP036455.1_484992_485409_+	COG1278, CspC, Cold shock proteins [Transcription]	NA|281aa|up_3|CP036455.1_485554_486397_+	pfam11228, DUF3027, Protein of unknown function (DUF3027)	NA|221aa|up_2|CP036455.1_486567_487230_+	pfam01987, AIM24, Mitochondrial biogenesis AIM24	NA|1040aa|up_1|CP036455.1_487628_490748_+	PRK14083, PRK14083, HSP90 family protein; Provisional	NA|523aa|up_0|CP036455.1_490883_492452_-	pfam05175, MTS, Methyltransferase small domain	NA|127aa|down_0|CP036455.1_493173_493554_-	pfam10745, DUF2530, Protein of unknown function (DUF2530)	NA|503aa|down_1|CP036455.1_493820_495329_+	COG2252, COG2252, Xanthine/uracil/vitamin C permease [Nucleotide transport and    metabolism]	NA|150aa|down_2|CP036455.1_495512_495962_+	smart00347, HTH_MARR, helix_turn_helix multiple antibiotic resistance protein	NA|503aa|down_3|CP036455.1_496048_497557_+	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|208aa|down_4|CP036455.1_497677_498301_+	TIGR02258, UPF0097_protein_AF_2157, 2'-5' RNA ligase	NA|33aa|down_5|CP036455.1_498441_498540_+	NA	NA|242aa|down_6|CP036455.1_498615_499341_-	COG3246, COG3246, Uncharacterized conserved protein [Function unknown]	NA|360aa|down_7|CP036455.1_499440_500520_+	pfam13449, Phytase-like, Esterase-like activity of phytase	NA|321aa|down_8|CP036455.1_500724_501687_-	pfam04655, APH_6_hur, Aminoglycoside/hydroxyurea antibiotic resistance kinase	NA|369aa|down_9|CP036455.1_501683_502790_-	cd08602, GDPD_ScGlpQ1_like, Glycerophosphodiester phosphodiesterase domain of Streptomycin coelicolor (GlpQ1) and similar proteins
GCA_004323735.1_ASM432373v1	CP036455	Streptomonospora sp. M2 chromosome, complete genome	6	2223300-2223396	6	CRISPRCasFinder	no	Cas14u_CAS-V	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	Unclear	CGCCCTCCTCGCCGCTCTCGCCGG	24	0	0	NA	NA	NA	1	1	Unclear	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	NA|112aa|up_9|CP036455.1_2210175_2210511_-,NA|69aa|down_3|CP036455.1_2227428_2227635_+,NA|214aa|down_9|CP036455.1_2232175_2232817_+	NA|112aa|up_9|CP036455.1_2210175_2210511_-	NA	NA|475aa|up_8|CP036455.1_2210755_2212180_-	TIGR00653, Glutamine_synthetase, glutamine synthetase, type I	NA|149aa|up_7|CP036455.1_2212482_2212929_+	pfam06271, RDD, RDD family	NA|249aa|up_6|CP036455.1_2213001_2213748_-	pfam13829, DUF4191, Domain of unknown function (DUF4191)	NA|314aa|up_5|CP036455.1_2214092_2215034_-	PRK05481, PRK05481, lipoyl synthase; Provisional	NA|239aa|up_4|CP036455.1_2215090_2215807_-	PRK14345, PRK14345, lipoyl(octanoyl) transferase LipB	NA|309aa|up_3|CP036455.1_2215799_2216726_-	cd05242, SDR_a8, atypical (a) SDRs, subgroup 8	NA|504aa|up_2|CP036455.1_2217124_2218636_-	TIGR02927, putative_dihydrolipoamide_acyltransferase, 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	NA|459aa|up_1|CP036455.1_2218712_2220089_-	PRK06416, PRK06416, dihydrolipoamide dehydrogenase; Reviewed	NA|501aa|up_0|CP036455.1_2220182_2221685_-	PRK00913, PRK00913, multifunctional aminopeptidase A; Provisional	NA|300aa|down_0|CP036455.1_2223665_2224565_-	PRK00235, cobS, cobalamin synthase; Reviewed	Cas14u_CAS-V|386aa|down_1|CP036455.1_2224774_2225932_+	COG0675, COG0675, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	NA|348aa|down_2|CP036455.1_2226055_2227099_-	pfam02283, CobU, Cobinamide kinase / cobinamide phosphate guanyltransferase	NA|69aa|down_3|CP036455.1_2227428_2227635_+	NA	NA|333aa|down_4|CP036455.1_2227881_2228880_-	cd19074, Aldo_ket_red_shaker-like, Shaker potassium channel beta subunit family and similar proteins	NA|220aa|down_5|CP036455.1_2229012_2229672_-	pfam11241, DUF3043, Protein of unknown function (DUF3043)	NA|282aa|down_6|CP036455.1_2229760_2230606_+	COG1842, PspA, Phage shock protein A (IM30), suppresses sigma54-dependent transcription [Transcription / Signal transduction mechanisms]	NA|95aa|down_7|CP036455.1_2230602_2230887_+	PRK11750, gltB, glutamate synthase subunit alpha; Provisional	NA|307aa|down_8|CP036455.1_2231165_2232086_+	PRK02391, PRK02391, heat shock protein HtpX; Provisional	NA|214aa|down_9|CP036455.1_2232175_2232817_+	NA
GCA_004323735.1_ASM432373v1	CP036455	Streptomonospora sp. M2 chromosome, complete genome	9	4132714-4132808	8	CRISPRCasFinder	no	DinG	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	Type IV-A	GCGCGCCACCGGCGGGCACCCGA	23	0	0	NA	NA	NA	1	1	Orphan	cas3,cas8e,cse2gr11,cas7,cas5,cas6e,cas1,cas2,Cas14u_CAS-V,WYL,csa3,DEDDh,c2c9_V-U4,c2c10_CAS-V-U3,cas4,casR,csm3gr7,csx25,cas10,csx1,DinG	NA|116aa|up_9|CP036455.1_4121296_4121644_+,NA|175aa|up_7|CP036455.1_4123272_4123797_+,NA|318aa|up_2|CP036455.1_4129640_4130594_+,NA|89aa|down_7|CP036455.1_4141444_4141711_-	NA|116aa|up_9|CP036455.1_4121296_4121644_+	NA	NA|442aa|up_8|CP036455.1_4121800_4123126_+	pfam01594, AI-2E_transport, AI-2E family transporter	NA|175aa|up_7|CP036455.1_4123272_4123797_+	NA	DinG|715aa|up_6|CP036455.1_4123917_4126062_-	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|264aa|up_5|CP036455.1_4126146_4126938_-	pfam04248, NTP_transf_9, Domain of unknown function (DUF427)	NA|525aa|up_4|CP036455.1_4127037_4128612_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|205aa|up_3|CP036455.1_4129029_4129644_+	TIGR02937, RNA_polymerase_sigma_factor, RNA polymerase sigma factor, sigma-70 family	NA|318aa|up_2|CP036455.1_4129640_4130594_+	NA	NA|203aa|up_1|CP036455.1_4130690_4131299_-	pfam06197, DUF998, Protein of unknown function (DUF998)	NA|300aa|up_0|CP036455.1_4131358_4132258_-	PHA03247, PHA03247, large tegument protein UL36; Provisional	NA|282aa|down_0|CP036455.1_4133406_4134252_-	cd01409, SIRT4, SIRT4: Eukaryotic and prokaryotic group (class2) which includes human sirtuin SIRT4 and several bacterial homologs; and are members of the SIR2 family of proteins, silent information regulator 2 (Sir2) enzymes which catalyze NAD+-dependent protein/histone deacetylation	NA|498aa|down_1|CP036455.1_4134840_4136334_+	TIGR00711, Uncharacterized_MFS-type_transporter_YhcA, drug resistance transporter, EmrB/QacA subfamily	NA|209aa|down_2|CP036455.1_4136617_4137244_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|133aa|down_3|CP036455.1_4137304_4137703_-	pfam02410, RsfS, Ribosomal silencing factor during starvation	NA|218aa|down_4|CP036455.1_4137730_4138384_-	PRK00071, nadD, nicotinate-nucleotide adenylyltransferase	NA|355aa|down_5|CP036455.1_4138590_4139655_+	cd07325, M48_Ste24p_like, M48 Ste24 endopeptidase-like, integral membrane metallopeptidase	NA|419aa|down_6|CP036455.1_4139782_4141039_-	PRK00197, proA, gamma-glutamyl phosphate reductase; Provisional	NA|89aa|down_7|CP036455.1_4141444_4141711_-	NA	NA|394aa|down_8|CP036455.1_4141837_4143019_-	PRK05429, PRK05429, gamma-glutamyl kinase; Provisional	NA|455aa|down_9|CP036455.1_4143125_4144490_-	PRK12296, obgE, GTPase CgtA; Reviewed
