The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	174272	251184	4883650	head,tRNA,portal,protease,integrase,tail,terminase,capsid	uncultured_Caudovirales_phage(52.63%)	78	211287:211304	227512:227529
QBI27830.1|174272_174776_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	7.3e-26
QBI27831.1|174781_175420_-	stringent starvation protein A	NA	NA	NA	NA	NA
QBI27832.1|175534_175819_+	hypothetical protein	NA	NA	NA	NA	NA
QBI27833.1|175736_176129_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
QBI27834.1|176144_176573_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
QBI27835.1|176791_177919_-	cell division protein ZapE	NA	NA	NA	NA	NA
QBI32051.1|178111_178510_+	hypothetical protein	NA	NA	NA	NA	NA
QBI27836.1|178678_180046_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.6	1.5e-20
QBI27837.1|180135_181203_+|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
QBI27838.1|181259_182195_-	malate dehydrogenase	NA	NA	NA	NA	NA
QBI27839.1|182631_183102_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
QBI27840.1|183478_183745_+	DUF1471 domain-containing protein	NA	NA	NA	NA	NA
QBI27841.1|183802_184081_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27842.1|184200_186168_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
QBI27843.1|186173_187106_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
QBI27844.1|187113_187317_-	protein AaeX	NA	NA	NA	NA	NA
QBI27845.1|187501_188431_+	transcriptional regulator	NA	NA	NA	NA	NA
QBI32052.1|188517_189963_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
QBI27846.1|190124_193940_-	TIGR02099 family protein	NA	NA	NA	NA	NA
QBI27847.1|194051_195521_-	ribonuclease E/G	NA	NA	NA	NA	NA
QBI27848.1|195510_196104_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
QBI27849.1|196111_196600_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
QBI27850.1|196600_197623_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
QBI27851.1|197689_198733_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
QBI32053.1|198830_199031_+	hypothetical protein	NA	NA	NA	NA	NA
QBI27852.1|199039_200980_-	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
QBI27853.1|201205_202180_+	oxidoreductase	NA	NA	NA	NA	NA
QBI27854.1|202299_203304_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
QBI27855.1|203304_203904_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
QBI27856.1|204296_204767_+	acetyl-CoA carboxylase biotin carboxyl carrier protein subunit	NA	NA	NA	NA	NA
QBI27857.1|204777_206127_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
QBI27858.1|206234_206477_+	hypothetical protein	NA	NA	NA	NA	NA
QBI27859.1|206466_207918_+	sodium/panthothenate symporter	NA	NA	NA	NA	NA
QBI27860.1|207929_208811_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
QBI27861.1|208938_209715_+	carbonic anhydrase	NA	NA	NA	NA	NA
QBI27862.1|210013_210979_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
QBI27863.1|211004_211301_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
211287:211304	attL	TACGGCATGAACTGATAC	NA	NA	NA	NA
QBI27864.1|211458_211767_-	DUF3892 domain-containing protein	NA	NA	NA	NA	NA
QBI27865.1|211917_213579_-|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	97.5	0.0e+00
QBI27866.1|213562_213919_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
QBI27867.1|213876_214068_-|terminase	terminase	terminase	NA	NA	NA	NA
QBI27868.1|214049_214202_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27869.1|214194_214638_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	63.3	1.1e-49
QBI27870.1|214637_214931_-	hypothetical protein	NA	A0A2H4JD08	uncultured_Caudovirales_phage	85.6	2.0e-44
QBI27871.1|214927_215266_-|head,tail	head-tail adaptor protein	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	90.2	1.8e-52
QBI32054.1|215262_216489_-|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	97.3	5.8e-234
QBI27872.1|216499_217060_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	98.9	4.5e-101
QBI27873.1|217111_218278_-|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	99.2	7.5e-215
QBI27874.1|218510_218813_-	hypothetical protein	NA	A0A2H4JB54	uncultured_Caudovirales_phage	86.3	2.0e-42
QBI27875.1|219167_221858_-	DNA primase	NA	A0A1W6JPG0	Morganella_phage	53.7	1.4e-272
QBI27876.1|221854_222109_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27877.1|222098_222305_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27878.1|222301_222496_-	hypothetical protein	NA	NA	NA	NA	NA
QBI32056.1|222488_222680_-	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
QBI32055.1|222822_223026_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
QBI27879.1|224565_224850_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
QBI27880.1|225470_226121_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27881.1|226120_227341_-|integrase	integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.7	1.3e-153
QBI27882.1|227614_228499_+	adenine-specific DNA-methyltransferase	NA	M4QNN5	Ostreococcus_lucimarinus_virus	32.8	2.8e-28
227512:227529	attR	TACGGCATGAACTGATAC	NA	NA	NA	NA
QBI27883.1|228581_228746_+	DUF2556 domain-containing protein	NA	NA	NA	NA	NA
QBI27884.1|228791_229448_-	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
QBI27885.1|229867_231028_+	MexX family efflux pump subunit	NA	NA	NA	NA	NA
QBI27886.1|231039_234153_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QBI27887.1|234423_234645_+	hypothetical protein	NA	NA	NA	NA	NA
QBI27888.1|235105_236131_+	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	39.8	5.3e-71
QBI27889.1|236200_237382_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QBI27890.1|237391_238495_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
QBI27891.1|238502_239261_+	amino acid ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	3.1e-20
QBI27892.1|245020_245233_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27893.1|245260_245815_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
QBI27894.1|245790_246048_-	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
QBI27895.1|246044_246866_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
QBI27896.1|246867_247440_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
QBI27897.1|247444_247987_-	hypothetical protein	NA	NA	NA	NA	NA
QBI27898.1|248013_248487_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
QBI27899.1|248458_249583_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
QBI27900.1|249712_250222_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
QBI27901.1|250236_251184_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	39.8	2.0e-08
>prophage 2
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	2686500	2758618	4883650	head,tRNA,integrase,portal,tail,terminase,holin,transposase,capsid	Klebsiella_phage(25.86%)	91	2683330:2683344	2704186:2704200
2683330:2683344	attL	CTGGCTGATACGGTG	NA	NA	NA	NA
QBI30050.1|2686500_2687787_-|integrase	site-specific integrase	integrase	A0A0U2JGI6	Escherichia_phage	50.4	5.5e-110
QBI30051.1|2687786_2688002_-	hypothetical protein	NA	A0A0U2RY08	Escherichia_phage	56.3	5.7e-20
QBI30052.1|2688068_2690540_-	exodeoxyribonuclease VIII	NA	K7P6V4	Enterobacteria_phage	38.8	6.0e-113
QBI32148.1|2690681_2691008_-	transcriptional regulator	NA	NA	NA	NA	NA
QBI30053.1|2691293_2691608_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30054.1|2691983_2692364_-	transcriptional regulator	NA	K7PH71	Enterobacterial_phage	66.7	6.5e-19
QBI30055.1|2692469_2692682_+	XRE family transcriptional regulator	NA	A0A077K9X2	Edwardsiella_phage	59.7	3.8e-16
QBI30056.1|2692685_2693240_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30057.1|2694270_2694861_+	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	77.5	3.5e-67
QBI30058.1|2694984_2695338_+	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	51.9	4.8e-24
QBI30059.1|2695385_2695748_+	arsenical resistance operon transcriptional repressor ArsD	NA	NA	NA	NA	NA
QBI30060.1|2695765_2697517_+	arsenical pump-driving ATPase	NA	NA	NA	NA	NA
QBI30061.1|2697563_2698853_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	73.8	9.6e-171
QBI30062.1|2698865_2699291_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	4.3e-51
QBI30063.1|2699358_2699655_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QBI30064.1|2699755_2700847_+	permease	NA	NA	NA	NA	NA
QBI30065.1|2701133_2701367_+	DinI family protein	NA	K7PM44	Enterobacteria_phage	83.1	6.0e-31
QBI30066.1|2701412_2701658_+	hypothetical protein	NA	H6WRY6	Salmonella_phage	63.0	2.9e-20
QBI30067.1|2701787_2701988_+	hypothetical protein	NA	H6WRY8	Salmonella_phage	60.0	1.2e-16
QBI30068.1|2701990_2702350_+	RusA family crossover junction endodeoxyribonuclease	NA	G8C7V6	Escherichia_phage	64.4	1.2e-41
QBI30069.1|2702346_2703387_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.7	1.3e-96
QBI32149.1|2703400_2704015_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	76.9	1.0e-85
QBI30070.1|2704101_2704299_-	oxidoreductase	NA	NA	NA	NA	NA
2704186:2704200	attR	CACCGTATCAGCCAG	NA	NA	NA	NA
QBI30071.1|2704767_2705184_-	hypothetical protein	NA	NA	NA	NA	NA
QBI30072.1|2705286_2705475_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30073.1|2705628_2705907_+|holin	holin	holin	K7P6H9	Enterobacteria_phage	100.0	3.9e-45
QBI30074.1|2705878_2706427_+	lysozyme	NA	K7PM52	Enterobacteria_phage	94.5	2.1e-98
QBI30075.1|2706405_2706939_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
QBI30076.1|2706935_2707166_+	hypothetical protein	NA	NA	NA	NA	NA
QBI32150.1|2707556_2707754_+	hypothetical protein	NA	K7PHC3	Enterobacterial_phage	90.8	3.7e-26
QBI30077.1|2707791_2707947_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
QBI30078.1|2708325_2708538_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	72.9	4.6e-22
QBI32151.1|2708548_2708737_+	cold-shock protein	NA	NA	NA	NA	NA
QBI30079.1|2708810_2709041_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30080.1|2709245_2709419_+	addiction module toxin, GnsA/GnsB family	NA	NA	NA	NA	NA
QBI30081.1|2709791_2710331_-	cytochrome b	NA	A0A0U2QLA7	Escherichia_phage	79.0	6.4e-44
QBI30082.1|2710606_2710969_+	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	86.7	3.7e-56
QBI32152.1|2711280_2711658_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZBP6	Stx2-converting_phage	90.4	2.4e-58
QBI30083.1|2711657_2712005_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	98.3	4.8e-61
QBI30084.1|2712054_2713593_+|transposase	IS66 family transposase	transposase	A0A0P0ZBS5	Stx2-converting_phage	91.0	5.7e-271
QBI30085.1|2713643_2714150_+|terminase	phage terminase small subunit P27 family	terminase	Q8HAD7	Salmonella_phage	93.9	1.0e-83
QBI30086.1|2714146_2715874_+|terminase	terminase large subunit	terminase	Q8HAD6	Salmonella_phage	92.8	0.0e+00
QBI30087.1|2715867_2716047_+	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	71.2	3.3e-13
QBI30088.1|2716046_2717306_+|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.0	7.1e-219
QBI30089.1|2717342_2718263_+	serine peptidase	NA	Q6UAX7	Klebsiella_phage	79.7	6.0e-135
QBI30090.1|2718335_2719622_+|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	87.6	8.0e-210
QBI30091.1|2719719_2720097_+	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	59.5	3.2e-18
QBI32153.1|2720077_2720395_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	79.6	2.8e-39
QBI30092.1|2720391_2720742_+|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	73.9	1.6e-43
QBI30093.1|2720710_2721100_+	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	63.7	4.3e-42
QBI30094.1|2721096_2721498_+	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	85.0	1.1e-56
QBI30095.1|2721531_2722014_+|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	81.2	4.7e-62
QBI30096.1|2722076_2722439_+|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	56.8	2.5e-28
QBI32154.1|2722453_2722687_+	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	66.2	8.3e-25
QBI30097.1|2722686_2725977_+|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	65.3	0.0e+00
QBI30098.1|2725977_2726310_+|tail	phage tail protein	tail	A0A0P0ZDL9	Stx2-converting_phage	67.0	2.0e-40
QBI30099.1|2726318_2727014_+|tail	phage minor tail protein L	tail	Q687F1	Enterobacteria_phage	71.0	1.0e-94
QBI30100.1|2727025_2727760_+|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	77.9	3.2e-115
QBI30101.1|2727657_2728335_+|tail	tail assembly protein	tail	A0A2R9YJH6	Escherichia_phage	71.1	2.0e-71
QBI30102.1|2728407_2731809_+	host specificity protein J	NA	K7PKJ2	Enterobacteria_phage	70.4	0.0e+00
QBI30103.1|2731850_2733803_+	hypothetical protein	NA	A0A0P0ZCC1	Stx2-converting_phage	50.4	1.2e-18
QBI30104.1|2733814_2734399_+	DUF4376 domain-containing protein	NA	Q7BQC6	Enterobacteria_phage	47.9	1.1e-46
QBI30105.1|2734634_2735363_+	MerR family transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	44.8	7.8e-45
QBI30106.1|2735566_2736001_+	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
QBI30107.1|2735997_2736717_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
QBI30108.1|2736713_2737970_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
QBI30109.1|2737971_2738694_+	DUF1365 domain-containing protein	NA	NA	NA	NA	NA
QBI30110.1|2738690_2739911_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QBI30111.1|2739907_2740393_+	DUF2878 domain-containing protein	NA	NA	NA	NA	NA
QBI30112.1|2740389_2740917_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30113.1|2740913_2741444_+	DUF3833 domain-containing protein	NA	NA	NA	NA	NA
QBI30114.1|2741457_2742417_+	DUF1722 domain-containing protein	NA	NA	NA	NA	NA
QBI30115.1|2742599_2742836_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30116.1|2743140_2743809_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	60.8	1.3e-81
QBI30117.1|2744245_2745616_-	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.6	4.7e-107
QBI32155.1|2745619_2746261_-	lysogenization protein HflD	NA	NA	NA	NA	NA
QBI30118.1|2746295_2747402_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
QBI30119.1|2747455_2747917_-	NUDIX hydrolase	NA	NA	NA	NA	NA
QBI30120.1|2747926_2748865_-	hypothetical protein	NA	NA	NA	NA	NA
QBI30121.1|2748899_2749523_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
QBI30122.1|2749725_2750976_+	isocitrate dehydrogenase (NADP(+))	NA	Q77Z09	Phage_21	96.3	1.9e-22
QBI30123.1|2751114_2751624_-	DedA family protein	NA	NA	NA	NA	NA
QBI30124.1|2751798_2752041_-	DinI family protein	NA	Q6UAW0	Klebsiella_phage	77.9	1.5e-29
QBI30125.1|2752119_2752353_+	DNA polymerase V	NA	A0A222YZE2	Escherichia_phage	80.3	6.6e-22
QBI30126.1|2752429_2753128_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.1	3.8e-89
QBI32156.1|2753213_2753534_+	transcriptional regulator	NA	A0A2H4J145	uncultured_Caudovirales_phage	44.8	3.2e-19
QBI30127.1|2753578_2754868_+	arsenical efflux pump membrane protein ArsB	NA	A0A2H4J144	uncultured_Caudovirales_phage	70.4	3.2e-166
QBI30128.1|2754880_2755306_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	70.7	4.7e-50
QBI30129.1|2756194_2756680_+	hypothetical protein	NA	A0A1B0VBR9	Salmonella_phage	34.9	2.3e-08
QBI30130.1|2756690_2756945_+	hypothetical protein	NA	NA	NA	NA	NA
QBI30131.1|2757450_2758618_+|transposase	IS3 family transposase	transposase	Q716C2	Shigella_phage	89.5	8.4e-166
>prophage 3
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	2851351	2861389	4883650	tRNA	Tupanvirus(14.29%)	10	NA	NA
QBI30219.1|2851351_2852335_+|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2K9L3A8	Tupanvirus	38.5	1.4e-33
QBI30220.1|2852350_2854738_+|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
QBI30221.1|2854742_2855042_+	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	40.0	7.2e-13
QBI30222.1|2855195_2856176_+	vitamin B12 ABC transporter permease BtuC	NA	A0A2H4IY97	uncultured_Caudovirales_phage	24.8	6.7e-15
QBI30223.1|2856236_2856788_+	glutathione peroxidase	NA	NA	NA	NA	NA
QBI30224.1|2856787_2857537_+	vitamin B12 ABC transporter ATP-binding protein BtuD	NA	A0A2R8FG22	Brazilian_cedratvirus	30.3	9.3e-09
QBI30225.1|2857614_2858079_+	endopeptidase	NA	A0A1V0DZX6	Clostridioides_phage	38.2	3.5e-14
QBI30226.1|2858395_2859109_+	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI30227.1|2859170_2860613_+	SELO family protein	NA	A0A075BSJ0	Microcystis_phage	35.3	4.5e-52
QBI30228.1|2860609_2861389_-	heme ABC transporter ATP-binding protein	NA	A0A285PWH2	Cedratvirus	26.7	7.9e-11
>prophage 4
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	3701981	3709606	4883650		Enterobacteria_phage(42.86%)	7	NA	NA
QBI31005.1|3701981_3702986_+	NAD-dependent epimerase	NA	A0A0K0KW07	Prochlorococcus_phage	32.2	1.9e-17
QBI31006.1|3703044_3704211_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	55.0	1.5e-114
QBI31007.1|3704409_3705816_-	phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating)	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.5	1.4e-37
QBI31008.1|3706148_3707021_-	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	65.2	1.7e-107
QBI31009.1|3707059_3707959_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	3.0e-30
QBI31010.1|3707958_3709047_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.0	4.1e-98
QBI31011.1|3709063_3709606_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	60.7	3.3e-56
>prophage 5
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	3760795	3803057	4883650	head,plate,portal,integrase,protease,tail,terminase,lysis,capsid	Erwinia_phage(24.39%)	45	3765057:3765083	3797741:3797767
QBI31049.1|3760795_3762199_+	two-component system sensor histidine kinase BaeA	NA	W8CYF6	Bacillus_phage	29.2	5.0e-32
QBI31050.1|3762195_3762918_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	32.7	9.2e-30
QBI31051.1|3763053_3763386_+	DUF1508 domain-containing protein	NA	NA	NA	NA	NA
QBI31052.1|3763545_3764907_+	U32 family peptidase	NA	Q6DW11	Phage_TP	92.9	5.3e-204
3765057:3765083	attL	CCCTTACGCAGGCTTATTTTTTGCCTG	NA	NA	NA	NA
QBI31053.1|3765458_3765719_+	hypothetical protein	NA	NA	NA	NA	NA
QBI31054.1|3765945_3766167_-	transcriptional regulator	NA	A0A2I8TV89	Erwinia_phage	75.3	7.6e-28
QBI31055.1|3766242_3767412_-	hypothetical protein	NA	Q6K1G4	Salmonella_virus	78.6	4.6e-172
QBI31056.1|3767408_3767873_-|tail	phage tail protein	tail	A0A218M4I2	Erwinia_phage	72.1	7.9e-59
QBI31057.1|3767886_3770328_-|tail	phage tail tape measure protein	tail	Q858U7	Yersinia_virus	74.3	9.6e-305
QBI31058.1|3770317_3770440_-|tail	GpE family phage tail protein	tail	O80316	Escherichia_phage	87.2	1.3e-13
QBI31059.1|3770472_3770787_-|tail	phage tail assembly protein	tail	A0A0M4S5P8	Salmonella_phage	66.0	2.2e-28
QBI31060.1|3770840_3771359_-|tail	phage major tail tube protein	tail	A0A218M4J0	Erwinia_phage	81.4	1.4e-77
QBI31061.1|3771371_3772565_-|tail	phage tail protein	tail	S4TRX2	Salmonella_phage	83.1	3.0e-187
QBI31062.1|3772700_3773279_-|tail	tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	57.1	1.3e-58
QBI31063.1|3773278_3775210_-|tail	phage tail protein	tail	Q6K1H2	Salmonella_virus	83.2	2.0e-148
QBI31064.1|3775220_3775751_-|tail	phage tail protein I	tail	Q37841	Escherichia_phage	92.0	2.1e-95
QBI31065.1|3775743_3776652_-|plate	baseplate assembly protein	plate	A0A0F7LCQ9	Escherichia_phage	85.8	3.6e-140
QBI31066.1|3776867_3777218_-|plate	baseplate assembly protein	plate	A0A0M4RE59	Salmonella_phage	74.1	2.1e-40
QBI31067.1|3777214_3777856_-|plate	phage baseplate assembly protein V	plate	A0A0M4S6F6	Salmonella_phage	82.2	1.2e-94
QBI31068.1|3778135_3780730_-	hypothetical protein	NA	NA	NA	NA	NA
QBI31069.1|3780988_3781435_-	phage virion morphogenesis protein	NA	O80313	Escherichia_phage	68.0	2.7e-48
QBI31070.1|3781427_3781895_-|tail	phage tail protein	tail	A0A218M4K6	Erwinia_phage	74.2	4.5e-62
QBI31071.1|3781857_3782016_-|lysis	phage lysis protein	lysis	A0A218M4L1	Erwinia_phage	75.0	2.4e-15
QBI31072.1|3781990_3782419_-	protein lysB	NA	A0A218M4K2	Erwinia_phage	63.0	8.4e-39
QBI31073.1|3782400_3782832_-	lysA protein	NA	A0A218M4L6	Erwinia_phage	62.9	1.4e-46
QBI31074.1|3782828_3783341_-	glycoside hydrolase	NA	A0A218M4K3	Erwinia_phage	88.8	1.3e-83
QBI31075.1|3783324_3783546_-	primosomal protein	NA	A0A218M4L5	Erwinia_phage	79.2	2.2e-27
QBI31076.1|3783536_3783740_-|tail	phage tail protein	tail	S4TTA0	Salmonella_phage	85.1	4.5e-27
QBI31077.1|3783739_3784246_-|head	head completion/stabilization protein	head	O80306	Escherichia_phage	72.6	8.9e-64
QBI31078.1|3784345_3785101_-|terminase	terminase	terminase	O80305	Escherichia_phage	73.4	1.1e-81
QBI31079.1|3785104_3786172_-|capsid	phage major capsid protein, P2 family	capsid	S4TUA6	Salmonella_phage	84.2	3.0e-170
QBI31080.1|3786233_3787088_-|capsid	GPO family capsid scaffolding protein	capsid	A0A218M4L9	Erwinia_phage	71.5	2.7e-113
QBI31081.1|3787254_3789024_+	oxidoreductase	NA	Q9T0R3	Escherichia_phage	84.7	6.1e-301
QBI31082.1|3789025_3790042_+|portal	phage portal protein	portal	Q6K1J0	Salmonella_virus	83.3	9.2e-169
QBI31083.1|3790555_3792343_-	hypothetical protein	NA	NA	NA	NA	NA
QBI31084.1|3794603_3794867_-	hypothetical protein	NA	U5N3W1	Enterobacteria_phage	61.6	6.1e-24
QBI31085.1|3794897_3795107_-	DUF2732 domain-containing protein	NA	Q7Y4C2	Escherichia_virus	64.8	2.1e-11
QBI31086.1|3795173_3795674_-	replication protein B	NA	M1SV55	Escherichia_phage	74.1	4.1e-69
QBI31087.1|3795854_3796130_-	hypothetical protein	NA	Q1JS60	Enterobacteria_phage	86.4	7.5e-41
QBI31088.1|3796252_3796552_+	XRE family transcriptional regulator	NA	Q1JS63	Enterobacteria_phage	69.7	1.9e-34
QBI31089.1|3796648_3797656_+|integrase	integrase	integrase	Q83VS6	Escherichia_phage	86.3	1.8e-169
QBI31090.1|3797860_3800137_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.1	1.4e-164
3797741:3797767	attR	CCCTTACGCAGGCTTATTTTTTGCCTG	NA	NA	NA	NA
QBI31091.1|3800167_3800488_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	3.5e-13
QBI31092.1|3800811_3801036_+	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.7	3.6e-17
QBI31093.1|3801110_3803057_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	41.8	2.4e-40
>prophage 6
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	3852758	3861177	4883650	tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
QBI31140.1|3852758_3854792_+|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	4.0e-54
QBI31141.1|3854998_3855457_+	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	68.0	5.1e-50
QBI32200.1|3855499_3855970_-	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	76.9	4.9e-64
QBI31142.1|3856016_3856736_-	two-component system response regulator YehT	NA	NA	NA	NA	NA
QBI31143.1|3856732_3858418_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.6	6.7e-281
QBI31144.1|3858643_3859375_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	93.5	1.8e-105
QBI31145.1|3859426_3859534_+	hypothetical protein	NA	NA	NA	NA	NA
QBI31146.1|3859514_3860246_-	osmoprotectant uptake system permease	NA	NA	NA	NA	NA
QBI31147.1|3860229_3861177_-	ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	25.6	2.2e-07
>prophage 7
CP036435	Citrobacter freundii complex strain ABFQG, complete genome	4883650	4401723	4413615	4883650	integrase	Enterobacteria_phage(71.43%)	12	4401651:4401673	4411630:4411652
4401651:4401673	attL	AATTGGTACACGTTTAGGTACAC	NA	NA	NA	NA
QBI31610.1|4401723_4402914_+|integrase	integrase	integrase	A0A1B5FPC6	Escherichia_phage	49.9	1.2e-106
QBI31611.1|4403161_4404130_+	hypothetical protein	NA	NA	NA	NA	NA
QBI31612.1|4404126_4405074_+	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
QBI31613.1|4405412_4405979_-	phage polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	62.2	6.5e-55
QBI31614.1|4405995_4406241_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	77.8	1.6e-31
QBI31615.1|4406237_4406975_-	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	65.7	1.4e-81
QBI31616.1|4407774_4408323_+	Ash-like/host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.4e-30
QBI31617.1|4408319_4408547_+	hypothetical protein	NA	NA	NA	NA	NA
QBI31618.1|4408543_4408864_+	hypothetical protein	NA	NA	NA	NA	NA
QBI31619.1|4408878_4411212_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	84.6	0.0e+00
QBI31620.1|4412017_4413223_+	DUF4236 domain-containing protein	NA	NA	NA	NA	NA
4411630:4411652	attR	AATTGGTACACGTTTAGGTACAC	NA	NA	NA	NA
QBI31621.1|4413396_4413615_-	hypothetical protein	NA	G8C7R9	Escherichia_phage	69.1	1.2e-20
