The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	7524	59714	4745660	protease,transposase	Acidithiobacillus_phage(16.67%)	37	NA	NA
QBI14478.1|7524_8361_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBI14479.1|8545_9352_+	M48 family peptidase	NA	NA	NA	NA	NA
QBI14480.1|9628_10822_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
QBI14481.1|10975_11644_+	energy transducer TonB	NA	NA	NA	NA	NA
QBI14482.1|11728_12490_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
QBI14483.1|12536_12959_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
QBI14484.1|12962_13376_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
QBI14485.1|13671_14439_-	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
QBI14486.1|14449_14719_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14487.1|14793_16254_-	cardiolipin synthase	NA	NA	NA	NA	NA
QBI17741.1|17399_18776_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.1	1.9e-76
QBI14488.1|19004_19883_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	1.5e-87
QBI17742.1|19906_21008_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	1.1e-42
QBI14489.1|21267_22395_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
QBI14490.1|23465_24806_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14491.1|25023_25716_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
QBI14492.1|25832_26153_+	DUF1820 family protein	NA	NA	NA	NA	NA
QBI14493.1|27450_28974_-	PDZ domain-containing protein	NA	A0A0R6PIZ1	Moraxella_phage	29.2	1.0e-25
QBI14494.1|29078_30314_-	peptidase M23	NA	NA	NA	NA	NA
QBI14495.1|30474_31131_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14496.1|31293_33105_+	M20/M25/M40 family metallo-hydrolase	NA	NA	NA	NA	NA
QBI14497.1|33252_33603_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
QBI14498.1|33909_35040_-	glycoside hydrolase family 5 protein	NA	NA	NA	NA	NA
QBI17743.1|35822_36875_-	glycoside hydrolase family 5 protein	NA	NA	NA	NA	NA
QBI14499.1|37575_38649_-	glycoside hydrolase family 5 protein	NA	NA	NA	NA	NA
QBI14500.1|38765_38972_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14501.1|38957_40016_+	NAD(P)-dependent alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	45.7	3.9e-77
QBI14502.1|42281_42626_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14503.1|42985_44467_-	glutamate synthase small subunit	NA	NA	NA	NA	NA
QBI14504.1|44660_49133_-	glutamate synthase large subunit	NA	NA	NA	NA	NA
QBI14505.1|49334_49715_-	Elastase inhibitor AFLEI Flags: Precursor	NA	NA	NA	NA	NA
QBI14506.1|49860_51048_+	DNA topoisomerase IB	NA	A0A0U2TSJ7	Niemeyer_virus	35.3	1.3e-41
QBI14507.1|51250_51556_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17744.1|52742_53882_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
QBI14508.1|54195_54981_-	DUF1868 domain-containing protein	NA	NA	NA	NA	NA
QBI14509.1|54991_57580_-	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI14510.1|58951_59714_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	327747	391047	4745660	transposase	Ralstonia_phage(33.33%)	53	NA	NA
QBI17761.1|327747_328850_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	3.8e-43
QBI14702.1|329716_330163_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14703.1|332932_333403_-	4-hydroxyphenylacetate 3-monooxygenase	NA	NA	NA	NA	NA
QBI14704.1|333457_333739_-	serine kinase	NA	NA	NA	NA	NA
QBI14705.1|333819_334062_-	serine kinase	NA	NA	NA	NA	NA
QBI14706.1|334071_335010_-	serine kinase	NA	NA	NA	NA	NA
QBI14707.1|335006_335834_-	4-hydroxyphenylacetate catabolism regulator HpaA	NA	NA	NA	NA	NA
QBI14708.1|335830_336091_-	EscS/YscS/HrcS family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
QBI17762.1|336095_336740_-	EscR/YscR/HrcR family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
QBI14709.1|336726_337680_-	YscQ/HrcQ family type III secretion apparatus protein	NA	NA	NA	NA	NA
QBI14710.1|337772_338414_-	type III secretion protein HpaP	NA	NA	NA	NA	NA
QBI17764.1|338413_340336_-	EscV/YscV/HrcV family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
QBI17763.1|340344_341418_-	EscU/YscU/HrcU family type III secretion system export apparatus switch protein	NA	NA	NA	NA	NA
QBI14711.1|341633_342089_+	HrpB1 family type III secretion system apparatus protein	NA	NA	NA	NA	NA
QBI14712.1|342122_342515_+	type III secretion protein HrpB2	NA	NA	NA	NA	NA
QBI14713.1|342516_343281_+	EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein	NA	NA	NA	NA	NA
QBI14714.1|343288_343918_+	type III secretion protein HrpB4	NA	NA	NA	NA	NA
QBI14715.1|343902_344604_+	HrpE/YscL family type III secretion apparatus protein	NA	NA	NA	NA	NA
QBI14716.1|344593_345922_+	EscN/YscN/HrcN family type III secretion system ATPase	NA	NA	NA	NA	NA
QBI14717.1|345914_346424_+	type III secretion protein HrpB7	NA	NA	NA	NA	NA
QBI14718.1|346420_347251_+	EscT/YscT/HrcT family type III secretion system export apparatus protein	NA	NA	NA	NA	NA
QBI14719.1|347333_349157_+	EscC/YscC/HrcC family type III secretion system outer membrane ring protein	NA	NA	NA	NA	NA
QBI14720.1|349896_350328_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14721.1|350717_351281_+	lytic transglycosylase	NA	A0A0K2QQJ4	Ralstonia_phage	39.4	5.2e-12
QBI14722.1|351744_353298_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14723.1|354564_354906_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17765.1|355090_357649_+	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
QBI14724.1|357667_357928_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14725.1|358007_358976_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI14726.1|359101_360826_-	AarF/ABC1/UbiB kinase family protein	NA	A0A0P0CRE2	Ostreococcus_lucimarinus_virus	28.7	3.0e-34
QBI14727.1|360836_361049_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14728.1|361066_362008_+	DUF808 domain-containing protein	NA	NA	NA	NA	NA
QBI14729.1|363560_365189_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
QBI14730.1|365726_367256_+	glycogen synthase GlgA	NA	NA	NA	NA	NA
QBI14731.1|367252_369484_+	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA	NA
QBI14732.1|369486_371244_+	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
QBI17766.1|371300_373190_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
QBI14733.1|373186_375790_+	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
QBI14734.1|375812_375998_+	DUF2934 domain-containing protein	NA	NA	NA	NA	NA
QBI14735.1|376111_378274_+	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
QBI14736.1|378290_378923_+	NAD-dependent epimerase/dehydratase family protein	NA	NA	NA	NA	NA
QBI17767.1|379288_380665_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI14737.1|380746_381502_-	SDR family oxidoreductase	NA	NA	NA	NA	NA
QBI14738.1|381465_381771_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14739.1|381879_383289_+	FAD-binding protein	NA	NA	NA	NA	NA
QBI14740.1|383444_383639_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14741.1|383637_384069_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17768.1|384539_385916_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	3.2e-63
QBI17769.1|386108_387485_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI14742.1|387521_387716_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14743.1|388155_389445_-	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.2	6.0e-40
QBI14744.1|389452_389704_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14745.1|390066_391047_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	56.7	1.4e-89
>prophage 3
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	488505	662923	4745660	tRNA,protease,transposase	Acidithiobacillus_phage(12.12%)	107	NA	NA
QBI14822.1|488505_489069_-|tRNA	tRNA threonylcarbamoyladenosine biosynthesis protein RimN	tRNA	NA	NA	NA	NA
QBI14823.1|489079_491572_-	DNA topoisomerase I	NA	A0A0G2YA05	Acanthamoeba_polyphaga_mimivirus	35.3	1.9e-114
QBI14824.1|491754_493029_-	RDD family protein	NA	NA	NA	NA	NA
QBI14825.1|493070_493793_-	DUF4339 domain-containing protein	NA	NA	NA	NA	NA
QBI14826.1|493833_494307_-	DUF494 family protein	NA	NA	NA	NA	NA
QBI14827.1|494349_495492_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
QBI14828.1|495563_496700_-	LysM peptidoglycan-binding domain-containing protein	NA	G3MBQ1	Bacillus_virus	57.1	1.7e-09
QBI14829.1|496832_497345_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	43.0	2.6e-18
QBI14830.1|498660_499974_+	16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB	NA	NA	NA	NA	NA
QBI14831.1|501915_503193_+	O-antigen ligase family protein	NA	NA	NA	NA	NA
QBI14832.1|503390_504215_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
QBI14833.1|504215_505274_+	CDP-glycerol glycerophosphotransferase	NA	NA	NA	NA	NA
QBI14834.1|505440_506946_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17780.1|506942_507452_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14835.1|507561_508695_-	GTP cyclohydrolase II RibA	NA	A0A2H4PQS2	Staphylococcus_phage	44.2	6.1e-28
QBI14836.1|508937_509459_+	N-acetyltransferase family protein	NA	NA	NA	NA	NA
QBI14837.1|509657_510572_-	lauroyl acyltransferase	NA	NA	NA	NA	NA
QBI14838.1|510672_511113_+|tRNA	D-tyrosyl-tRNA(Tyr) deacylase	tRNA	NA	NA	NA	NA
QBI17781.1|511221_513096_+	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	35.5	1.8e-37
QBI17782.1|513288_513609_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14839.1|514226_514460_-	hypothetical protein	NA	V9IQN0	Stenotrophomonas_phage	53.1	4.1e-16
QBI14840.1|516336_518226_-	transcription termination factor Rho	NA	NA	NA	NA	NA
QBI14841.1|518442_518784_-	thioredoxin TrxA	NA	A0A1J0GW78	Streptomyces_phage	44.4	2.3e-15
QBI14842.1|518982_520707_+	ATP-dependent RNA helicase RhlB	NA	A0A1V0SBR7	Catovirus	29.1	1.8e-47
QBI14843.1|520782_521469_+	cell division ATP-binding protein FtsE	NA	NA	NA	NA	NA
QBI14844.1|521465_522416_+	ABC transporter permease	NA	NA	NA	NA	NA
QBI17783.1|522472_523267_+	response regulator	NA	NA	NA	NA	NA
QBI14845.1|523263_523989_+	uracil-DNA glycosylase	NA	A0A0B5IW78	Pandoravirus	44.3	4.7e-50
QBI14846.1|524205_525081_+	RNA polymerase sigma factor RpoH	NA	A0A248SJA5	Salicola_phage	39.5	3.6e-44
QBI14847.1|525159_525774_-	trimeric intracellular cation channel family protein	NA	NA	NA	NA	NA
QBI14848.1|525826_527119_-	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
QBI14849.1|529409_529697_+	co-chaperone GroES	NA	A0A221S331	uncultured_virus	40.0	5.1e-16
QBI14850.1|529840_531481_+	chaperonin GroEL	NA	A0A2I7SAK5	Vibrio_phage	63.5	5.1e-177
QBI17784.1|531781_534058_-	type III secretion system effector protein	NA	NA	NA	NA	NA
QBI14851.1|535165_536134_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
QBI14852.1|538507_539476_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI14853.1|540406_541480_+	3-deoxy-7-phosphoheptulonate synthase	NA	S4W5F1	Pandoravirus	47.9	4.3e-84
QBI14854.1|541996_544174_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14855.1|544267_546685_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14856.1|546948_547869_-	SMP-30/gluconolactonase/LRE family protein	NA	NA	NA	NA	NA
QBI14857.1|547868_548387_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14858.1|548548_551374_+	bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase	NA	NA	NA	NA	NA
QBI14859.1|551469_552030_-	VUT family protein	NA	A0A2I7SAW6	Vibrio_phage	30.2	1.4e-12
QBI14860.1|553303_554680_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	52.7	3.9e-61
QBI14861.1|554577_555180_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14862.1|557685_558186_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14863.1|559086_560034_-	nucleoside-diphosphate sugar epimerase	NA	NA	NA	NA	NA
QBI14864.1|560169_560760_+	malonic semialdehyde reductase	NA	NA	NA	NA	NA
QBI14865.1|560970_561714_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
QBI14866.1|564029_566717_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
QBI14867.1|566803_567541_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17785.1|567551_568964_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	7.3e-63
QBI14868.1|570313_570874_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17786.1|571191_572568_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	7.1e-63
QBI14869.1|572878_575608_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	30.7	3.8e-68
QBI14870.1|575676_576852_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14871.1|576898_578815_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17787.1|578831_579933_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	2.2e-43
QBI14872.1|581181_582144_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
QBI14873.1|583292_587117_+	avirulence protein	NA	NA	NA	NA	NA
QBI14874.1|588186_589770_-	SDR family oxidoreductase	NA	M1NLX1	Moumouvirus	27.5	6.5e-36
QBI14875.1|590160_590352_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14876.1|592852_595177_-	S9 family peptidase	NA	NA	NA	NA	NA
QBI14877.1|597080_598172_-	DUF1615 domain-containing protein	NA	NA	NA	NA	NA
QBI14878.1|598284_598533_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17789.1|599136_600015_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QBI17788.1|600203_601088_+	DMT family transporter	NA	NA	NA	NA	NA
QBI14879.1|601365_603138_-	cellulase	NA	NA	NA	NA	NA
QBI14880.1|603535_605236_-	1,4-beta-cellobiosidase	NA	NA	NA	NA	NA
QBI14881.1|606390_607767_+	D-serine/D-alanine/glycine transporter	NA	NA	NA	NA	NA
QBI14882.1|607853_608849_-	type III secretion system effector protein	NA	NA	NA	NA	NA
QBI14883.1|609094_610006_+	magnesium transporter	NA	NA	NA	NA	NA
QBI14884.1|610540_610825_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14885.1|611154_611601_+	autotransporter	NA	NA	NA	NA	NA
QBI17790.1|611912_613014_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
QBI14886.1|613113_614145_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
QBI17791.1|614812_616189_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	3.2e-63
QBI14887.1|617361_619053_-	alpha,alpha-trehalase TreA	NA	NA	NA	NA	NA
QBI14888.1|619305_620091_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
QBI14889.1|621334_622339_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14890.1|622377_623307_-	GAF domain-containing protein	NA	NA	NA	NA	NA
QBI14891.1|623842_626731_-	insulinase family protein	NA	NA	NA	NA	NA
QBI14892.1|626983_629566_+	PAS domain S-box protein	NA	G3MA91	Bacillus_virus	29.2	3.2e-08
QBI14893.1|630143_630942_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI14894.1|633545_635006_-	endoglucanase	NA	H2DE45	Erwinia_phage	32.6	5.2e-48
QBI14895.1|635213_636701_+	SulP family inorganic anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	57.1	2.4e-125
QBI17792.1|636980_637934_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	38.0	1.7e-15
QBI14896.1|638102_639752_+	M28 family peptidase	NA	NA	NA	NA	NA
QBI17793.1|640820_642680_+	glucans biosynthesis glucosyltransferase MdoH	NA	NA	NA	NA	NA
QBI14897.1|642831_643500_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QBI14898.1|643504_644557_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	33.6	1.4e-18
QBI14899.1|644587_645325_+	response regulator transcription factor	NA	NA	NA	NA	NA
QBI14900.1|645355_646270_+	hydroxymethylbilane synthase	NA	NA	NA	NA	NA
QBI14901.1|646832_647633_-	DUF481 domain-containing protein	NA	NA	NA	NA	NA
QBI14902.1|648194_649160_+	YafY family transcriptional regulator	NA	NA	NA	NA	NA
QBI14903.1|649268_649838_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14904.1|650222_650534_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14905.1|650601_652695_+	S9 family peptidase	NA	NA	NA	NA	NA
QBI14906.1|653289_654474_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
QBI14907.1|654583_656719_+	oligopeptidase B	NA	F2Y2Z7	Organic_Lake_phycodnavirus	26.1	1.8e-28
QBI14908.1|657062_657461_+	DUF454 domain-containing protein	NA	NA	NA	NA	NA
QBI14909.1|657518_657761_+	sugar transporter	NA	NA	NA	NA	NA
QBI14910.1|657750_658605_+	diaminopimelate epimerase	NA	NA	NA	NA	NA
QBI14911.1|658592_659273_+	DUF484 family protein	NA	NA	NA	NA	NA
QBI14912.1|659466_660384_+	tyrosine recombinase XerC	NA	A0A142F2H8	Mycobacterium_phage	28.1	1.7e-12
QBI14913.1|660899_661451_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
QBI14914.1|661555_662923_+|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A2H5BJT2	Erwinia_phage	29.5	4.7e-43
>prophage 4
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	714646	799876	4745660	transposase	Ralstonia_phage(17.65%)	60	NA	NA
QBI14952.1|714646_715615_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	2.3e-100
QBI17796.1|715666_715765_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14953.1|716643_719352_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI14954.1|719502_722397_+	glycoside hydrolase family 2 protein	NA	L0N6M2	Herpes_simplex_virus	25.2	2.0e-22
QBI14955.1|722393_724790_+	alpha-N-acetylglucosaminidase	NA	NA	NA	NA	NA
QBI14956.1|724923_726090_+	DUF1624 domain-containing protein	NA	NA	NA	NA	NA
QBI14957.1|726304_727072_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QBI14958.1|727116_728394_+	glucose/galactose MFS transporter	NA	NA	NA	NA	NA
QBI14959.1|728434_729511_+	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QBI14960.1|729507_730536_+	SIS domain-containing protein	NA	NA	NA	NA	NA
QBI14961.1|730538_731693_+	N-acetylglucosamine-6-phosphate deacetylase	NA	NA	NA	NA	NA
QBI14962.1|732196_732802_-	poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD	NA	NA	NA	NA	NA
QBI14963.1|732798_734052_-	poly-beta-1,6 N-acetyl-D-glucosamine synthase	NA	NA	NA	NA	NA
QBI17797.1|734053_735952_-	poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase PgaB	NA	NA	NA	NA	NA
QBI14964.1|739207_740440_-	multifunctional CCA addition/repair protein	NA	K4IEX3	Salmonella_phage	41.5	2.3e-73
QBI14965.1|740660_741629_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI14966.1|747048_748080_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.3e-74
QBI17798.1|748074_748818_-	EEP domain-containing protein	NA	NA	NA	NA	NA
QBI14967.1|748867_749683_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
QBI14968.1|749774_750425_-	thiol:disulfide interchange protein DsbA/DsbL	NA	NA	NA	NA	NA
QBI17799.1|750518_751259_-	cytochrome c4	NA	NA	NA	NA	NA
QBI14969.1|751460_752084_+	YihA family ribosome biogenesis GTP-binding protein	NA	NA	NA	NA	NA
QBI14970.1|752177_752873_-	VIT family protein	NA	NA	NA	NA	NA
QBI14971.1|753088_754453_+	glutamate--cysteine ligase	NA	NA	NA	NA	NA
QBI14972.1|756875_757361_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14973.1|758303_759224_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14974.1|759256_760756_-	HAMP domain-containing histidine kinase	NA	W8CYF6	Bacillus_phage	24.1	3.6e-12
QBI14975.1|760752_761472_-	response regulator transcription factor	NA	NA	NA	NA	NA
QBI14976.1|761610_762711_+	glycosyltransferase	NA	A0A142BZU7	Faustovirus	28.5	9.8e-15
QBI14977.1|763845_764121_+	metal/formaldehyde-sensitive transcriptional repressor	NA	NA	NA	NA	NA
QBI14978.1|764185_765295_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.4	3.8e-35
QBI14979.1|765363_765939_+	S-(hydroxymethyl)glutathione synthase	NA	NA	NA	NA	NA
QBI14980.1|765998_766829_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
QBI14981.1|766958_767168_+	DUF4386 family protein	NA	NA	NA	NA	NA
QBI14982.1|767219_768188_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI14983.1|768361_768838_+	DUF4386 domain-containing protein	NA	NA	NA	NA	NA
QBI14984.1|768834_769179_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14985.1|769354_771016_-	energy-dependent translational throttle protein EttA	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.3e-39
QBI14986.1|771241_771739_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17800.1|771907_772132_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14987.1|772409_774740_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI14988.1|774925_776179_+	serine hydroxymethyltransferase	NA	A0A219Y950	Aeromonas_phage	54.4	1.6e-101
QBI14989.1|776192_776708_+	hypothetical protein	NA	NA	NA	NA	NA
QBI14990.1|776707_777232_+	transcriptional repressor NrdR	NA	NA	NA	NA	NA
QBI14991.1|777228_777714_+	N-acetyltransferase	NA	NA	NA	NA	NA
QBI17801.1|777725_778820_+	bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD	NA	A0A1V0SE20	Indivirus	35.4	1.8e-45
QBI14992.1|778875_779499_-	hypothetical protein	NA	NA	NA	NA	NA
QBI14993.1|780059_780662_+	riboflavin synthase	NA	A0A2H4PQS5	Staphylococcus_phage	36.0	3.9e-26
QBI14994.1|780658_781798_+	3,4-dihydroxy-2-butanone-4-phosphate synthase	NA	A0A2H4PQS2	Staphylococcus_phage	34.0	6.1e-52
QBI14995.1|782571_783042_+	transcription antitermination factor NusB	NA	NA	NA	NA	NA
QBI14996.1|783262_784237_+	thiamine-phosphate kinase	NA	NA	NA	NA	NA
QBI14997.1|784324_785122_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI14998.1|787072_788425_+	F-box domain-containing protein	NA	NA	NA	NA	NA
QBI14999.1|788874_788967_+	potassium-transporting ATPase subunit F	NA	NA	NA	NA	NA
QBI15000.1|788982_790776_+	potassium-transporting ATPase subunit KdpA	NA	NA	NA	NA	NA
QBI15001.1|790788_792837_+	K(+)-transporting ATPase subunit B	NA	E4ZFI9	Streptococcus_phage	28.2	1.7e-36
QBI15002.1|792877_793507_+	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
QBI15003.1|793557_796218_+	sensor histidine kinase KdpD	NA	B5LWN0	Feldmannia_species_virus	28.1	1.6e-10
QBI15004.1|796207_796924_+	response regulator transcription factor	NA	NA	NA	NA	NA
QBI17802.1|798774_799876_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
>prophage 5
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1024217	1085222	4745660	protease,transposase	Leptospira_phage(18.18%)	43	NA	NA
QBI15189.1|1024217_1025249_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.3e-74
QBI15190.1|1026309_1027278_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	2.8e-98
QBI15191.1|1029180_1030554_-	MFS transporter	NA	NA	NA	NA	NA
QBI15192.1|1030652_1032692_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
QBI15193.1|1032899_1033922_-	zinc-binding alcohol dehydrogenase family protein	NA	NA	NA	NA	NA
QBI15194.1|1033895_1034090_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15195.1|1034337_1035435_+	OmpA family protein	NA	NA	NA	NA	NA
QBI15196.1|1035627_1036137_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15197.1|1036156_1037017_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
QBI15198.1|1036967_1037360_-	HNH endonuclease	NA	NA	NA	NA	NA
QBI15199.1|1037362_1038571_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	26.5	2.9e-20
QBI15200.1|1038661_1039759_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBI15201.1|1039762_1040623_+	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
QBI15202.1|1040619_1041573_+	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
QBI15203.1|1041580_1042615_+	sulfate/molybdate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.7	2.0e-25
QBI15204.1|1042974_1043688_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17818.1|1043757_1044780_-	L-threonine 3-dehydrogenase	NA	NA	NA	NA	NA
QBI15205.1|1045295_1047629_-	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI17819.1|1050042_1052193_+	S46 family peptidase	NA	NA	NA	NA	NA
QBI15206.1|1052284_1052929_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
QBI15207.1|1053899_1055198_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
QBI15208.1|1055265_1056348_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
QBI15209.1|1056562_1057303_+	CvpA family protein	NA	NA	NA	NA	NA
QBI15210.1|1057339_1058806_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	40.1	8.3e-86
QBI15211.1|1058944_1059769_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
QBI15212.1|1060488_1061287_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI15213.1|1061749_1062169_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15214.1|1062348_1063092_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
QBI15215.1|1063719_1064262_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
QBI15216.1|1064242_1065379_-	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
QBI15217.1|1065583_1067110_-	exopolyphosphatase	NA	NA	NA	NA	NA
QBI15218.1|1067281_1069384_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
QBI15219.1|1069487_1070831_-	phosphate regulon sensor histidine kinase PhoR	NA	W8CYF6	Bacillus_phage	33.8	5.0e-29
QBI15220.1|1070888_1071578_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	35.7	5.9e-34
QBI15221.1|1071752_1073399_-	M48 family peptidase	NA	NA	NA	NA	NA
QBI15222.1|1073548_1073857_+	glutaredoxin 3	NA	A0A2L0UZG6	Agrobacterium_phage	43.2	4.7e-07
QBI15223.1|1073853_1074249_+	carboxymuconolactone decarboxylase family protein	NA	NA	NA	NA	NA
QBI15224.1|1074463_1075471_+	isocitrate dehydrogenase	NA	NA	NA	NA	NA
QBI15225.1|1075611_1076373_-	Bax inhibitor-1/YccA family protein	NA	NA	NA	NA	NA
QBI15226.1|1077579_1078638_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	42.9	2.6e-73
QBI15227.1|1079954_1080923_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
QBI15228.1|1083210_1084503_+	trigger factor	NA	NA	NA	NA	NA
QBI15229.1|1084595_1085222_+|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.4	1.0e-56
>prophage 6
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1109749	1172026	4745660	protease,transposase	Ralstonia_phage(18.18%)	53	NA	NA
QBI17822.1|1109749_1110841_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.0	9.3e-42
QBI17823.1|1110838_1111330_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15249.1|1111700_1112912_+	DNA polymerase III subunit gamma/tau	NA	E7DN81	Pneumococcus_phage	40.7	1.8e-46
QBI17824.1|1113112_1113796_+	DNA polymerase III subunit gamma/tau	NA	NA	NA	NA	NA
QBI15250.1|1113802_1114123_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
QBI15251.1|1114220_1114814_+	recombination protein RecR	NA	NA	NA	NA	NA
QBI15252.1|1114915_1115266_+	histidine triad nucleotide-binding protein	NA	NA	NA	NA	NA
QBI15253.1|1115385_1115919_-	Slp family lipoprotein	NA	NA	NA	NA	NA
QBI15254.1|1115918_1117868_-	DUF3488 domain-containing protein	NA	NA	NA	NA	NA
QBI15255.1|1117860_1118817_-	DUF58 domain-containing protein	NA	NA	NA	NA	NA
QBI15256.1|1118822_1119776_-	MoxR family ATPase	NA	NA	NA	NA	NA
QBI15257.1|1119813_1121682_+	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
QBI17825.1|1121832_1123626_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15258.1|1123730_1124306_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
QBI17826.1|1124418_1124928_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
QBI15259.1|1125025_1125220_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
QBI15260.1|1125309_1126287_+	ketoacyl-ACP synthase III	NA	NA	NA	NA	NA
QBI15261.1|1126518_1126959_+	MEKHLA domain-containing protein	NA	NA	NA	NA	NA
QBI15262.1|1127236_1128181_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
QBI15263.1|1128242_1128986_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	30.5	5.2e-12
QBI15264.1|1129190_1129430_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	44.6	5.9e-10
QBI15265.1|1129571_1130807_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
QBI15266.1|1130977_1132333_+	aminodeoxychorismate synthase component I	NA	NA	NA	NA	NA
QBI15267.1|1132393_1133467_+	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
QBI15268.1|1133463_1134423_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
QBI15269.1|1134419_1134773_+	pilus assembly protein PilZ	NA	NA	NA	NA	NA
QBI17827.1|1135360_1136737_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
QBI17828.1|1136831_1137290_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17829.1|1137493_1137820_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15270.1|1138056_1139832_-	propionate catabolism operon regulatory protein PrpR	NA	NA	NA	NA	NA
QBI15271.1|1139800_1140697_+	methylisocitrate lyase	NA	NA	NA	NA	NA
QBI15272.1|1140772_1141927_+	2-methylcitrate synthase	NA	NA	NA	NA	NA
QBI15273.1|1142124_1144716_+	Fe/S-dependent 2-methylisocitrate dehydratase AcnD	NA	NA	NA	NA	NA
QBI15274.1|1145038_1145176_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
QBI17830.1|1145260_1145464_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15275.1|1146661_1147630_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	2.3e-100
QBI15276.1|1147769_1148987_+	2-methylaconitate cis-trans isomerase PrpF	NA	NA	NA	NA	NA
QBI15277.1|1149491_1151708_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI15278.1|1151785_1152796_+	nucleoside hydrolase	NA	NA	NA	NA	NA
QBI15279.1|1153022_1153490_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15280.1|1153700_1156688_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI15281.1|1156862_1157810_+	glycerophosphodiester phosphodiesterase family protein	NA	A0A0S2MYI4	Enterococcus_phage	36.0	6.5e-07
QBI15282.1|1158800_1159361_-	bacterioferritin	NA	NA	NA	NA	NA
QBI15283.1|1160049_1160526_+	Hsp20/alpha crystallin family protein	NA	NA	NA	NA	NA
QBI15284.1|1160936_1161836_+	J domain-containing protein	NA	A0A2L0UZR4	Agrobacterium_phage	27.7	4.5e-18
QBI15285.1|1162397_1162784_+	response regulator	NA	W8CYM9	Bacillus_phage	31.8	9.6e-10
QBI15286.1|1163088_1163283_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15287.1|1163409_1164537_+|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
QBI15288.1|1164536_1165400_+|protease	protease modulator HflC	protease	NA	NA	NA	NA
QBI17831.1|1165694_1165880_+	DUF2065 family protein	NA	NA	NA	NA	NA
QBI15289.1|1166218_1167511_+	adenylosuccinate synthase	NA	W5S5V7	Pithovirus	37.7	2.2e-74
QBI15290.1|1167836_1170509_+	M1 family peptidase	NA	A0A0P0IY26	Acinetobacter_phage	28.2	4.7e-79
QBI15291.1|1170994_1172026_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1187377	1347465	4745660	plate,protease,transposase	Leptospira_phage(16.67%)	119	NA	NA
QBI15300.1|1187377_1188175_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI15301.1|1188633_1189059_-	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A1B3AYM0	Gordonia_phage	42.9	2.2e-07
QBI15302.1|1189068_1189290_-	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
QBI17836.1|1190093_1190696_+	translesion DNA synthesis-associated protein ImuA	NA	NA	NA	NA	NA
QBI15303.1|1190705_1192124_+	DNA polymerase Y family protein	NA	NA	NA	NA	NA
QBI17835.1|1192359_1195557_+	error-prone DNA polymerase	NA	A0A1B1PA77	Streptomyces_phage	25.0	5.4e-82
QBI15304.1|1195868_1196687_+	HDOD domain-containing protein	NA	NA	NA	NA	NA
QBI15305.1|1196799_1198197_-|protease	serine protease	protease	NA	NA	NA	NA
QBI15306.1|1198624_1200595_+	oligopeptide transporter, OPT family	NA	NA	NA	NA	NA
QBI15307.1|1200509_1201184_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15308.1|1201439_1202285_+	transporter	NA	NA	NA	NA	NA
QBI15309.1|1202573_1204694_+	S9 family peptidase	NA	NA	NA	NA	NA
QBI15310.1|1204970_1205432_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15311.1|1205563_1206289_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBI15312.1|1207106_1209248_+	outer protein P	NA	NA	NA	NA	NA
QBI15313.1|1209364_1211500_+	outer protein P	NA	NA	NA	NA	NA
QBI17837.1|1211662_1212468_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	37.1	5.3e-10
QBI17838.1|1213570_1214809_-	type III secretion system effector protein	NA	NA	NA	NA	NA
QBI15314.1|1215634_1217740_-	catalase	NA	A0A2K9L0T1	Tupanvirus	47.7	1.9e-136
QBI15315.1|1219341_1220037_-	VRR-NUC domain-containing protein	NA	Q8W6S1	Burkholderia_virus	45.5	7.0e-35
QBI15316.1|1220033_1220585_-	PAAR domain-containing protein	NA	NA	NA	NA	NA
QBI15317.1|1220708_1220891_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15318.1|1220950_1223884_-	glycine dehydrogenase (aminomethyl-transferring)	NA	M4QFZ1	Prochlorococcus_phage	49.9	1.4e-257
QBI15319.1|1224351_1224534_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15320.1|1224964_1225768_+	sulfotransferase	NA	M4QPS9	Synechococcus_phage	27.7	1.5e-25
QBI17839.1|1225856_1227068_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI15321.1|1230033_1230438_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15322.1|1230519_1232538_-	peptidase M2 family protein	NA	NA	NA	NA	NA
QBI15323.1|1232649_1234320_-	phosphoethanolamine transferase	NA	NA	NA	NA	NA
QBI15324.1|1234316_1235081_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
QBI17840.1|1235180_1236914_-	glycosyltransferase family 39 protein	NA	NA	NA	NA	NA
QBI15325.1|1237132_1237849_+	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	34.4	2.8e-23
QBI15326.1|1237841_1239134_+	HAMP domain-containing histidine kinase	NA	NA	NA	NA	NA
QBI15327.1|1239285_1239777_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15328.1|1239845_1240103_-	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
QBI15329.1|1240105_1240915_-	septum site-determining protein MinD	NA	NA	NA	NA	NA
QBI15330.1|1240950_1241691_-	septum site-determining protein MinC	NA	NA	NA	NA	NA
QBI15331.1|1241695_1242295_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QBI15332.1|1242539_1243736_+	sensor histidine kinase	NA	NA	NA	NA	NA
QBI15333.1|1243735_1244377_+	response regulator transcription factor	NA	NA	NA	NA	NA
QBI15334.1|1244727_1245924_+	polyketide cyclase	NA	NA	NA	NA	NA
QBI15335.1|1246005_1246392_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
QBI15336.1|1247131_1247929_-	D-alanyl-D-alanine carboxypeptidase family protein	NA	NA	NA	NA	NA
QBI15337.1|1248059_1248239_-	Arc family DNA binding domain-containing protein	NA	NA	NA	NA	NA
QBI15338.1|1248235_1248520_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15339.1|1249135_1250338_+	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
QBI15340.1|1250536_1250746_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15341.1|1250742_1251159_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15342.1|1251314_1252046_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15343.1|1252245_1253124_+	M15 family peptidase	NA	A8ATW4	Listeria_phage	34.5	3.9e-06
QBI15344.1|1253231_1253492_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
QBI15345.1|1253551_1255033_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15346.1|1258781_1259765_+	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
QBI15347.1|1259761_1260556_+	OmpA family protein	NA	NA	NA	NA	NA
QBI15348.1|1260608_1261679_-	type VI secretion system protein TssA	NA	NA	NA	NA	NA
QBI15349.1|1262609_1263641_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
QBI15350.1|1263712_1266532_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.4	1.0e-52
QBI15351.1|1267037_1268054_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.3	5.6e-49
QBI17841.1|1269161_1270538_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	3.0e-77
QBI17842.1|1270681_1272058_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	5.1e-61
QBI15352.1|1272722_1273691_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI15353.1|1273846_1274905_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	2.4e-74
QBI15354.1|1275070_1275664_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15355.1|1275660_1275864_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15356.1|1275879_1276911_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.3e-74
QBI15357.1|1276950_1277457_-	hypothetical protein	NA	K4I3P0	Salmonella_phage	36.4	2.1e-12
QBI15358.1|1277440_1277656_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17843.1|1278492_1279869_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
QBI15359.1|1280202_1281123_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15360.1|1281147_1282179_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
QBI15361.1|1282218_1282803_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17844.1|1285280_1286069_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
QBI15362.1|1286068_1287403_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
QBI15363.1|1287554_1288163_-	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
QBI17845.1|1288548_1289037_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15364.1|1289083_1289584_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
QBI15365.1|1289587_1291084_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
QBI15366.1|1291225_1291723_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
QBI15367.1|1291870_1292359_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
QBI15368.1|1292361_1294197_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
QBI15369.1|1294160_1295252_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
QBI15370.1|1295337_1298070_+	type VI secretion system ATPase TssH	NA	A0A223W0B1	Agrobacterium_phage	29.6	7.1e-91
QBI15371.1|1298100_1298454_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15372.1|1298546_1301279_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	27.4	4.0e-41
QBI15373.1|1301253_1302126_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17846.1|1304162_1305265_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	2.9e-43
QBI15374.1|1306231_1307257_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15375.1|1307569_1308634_-	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
QBI15376.1|1308648_1308900_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15377.1|1309199_1310312_-	3-dehydroquinate synthase	NA	NA	NA	NA	NA
QBI15378.1|1310308_1310851_-	shikimate kinase	NA	NA	NA	NA	NA
QBI15379.1|1311017_1311617_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
QBI15380.1|1311797_1312214_+	DUF2170 family protein	NA	NA	NA	NA	NA
QBI15381.1|1312226_1313000_+	PspA/IM30 family protein	NA	NA	NA	NA	NA
QBI15382.1|1313025_1314108_+	potassium channel protein	NA	NA	NA	NA	NA
QBI15383.1|1314110_1314782_+	DUF2491 family protein	NA	NA	NA	NA	NA
QBI15384.1|1314819_1315224_+	DUF350 domain-containing protein	NA	NA	NA	NA	NA
QBI15385.1|1315236_1315809_+	DUF1190 domain-containing protein	NA	A0A191ZBZ0	Erwinia_phage	28.1	6.4e-10
QBI15386.1|1315810_1316977_+	glutathionylspermidine synthase family protein	NA	B2ZXR7	Ralstonia_phage	41.6	6.4e-73
QBI17847.1|1317339_1317801_-	MFS transporter	NA	NA	NA	NA	NA
QBI15387.1|1319598_1321605_+	M1 family peptidase	NA	NA	NA	NA	NA
QBI17848.1|1322654_1325801_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI17849.1|1325820_1326057_-	transcriptional regulator	NA	NA	NA	NA	NA
QBI15388.1|1326132_1326885_+	peptide ABC transporter permease	NA	NA	NA	NA	NA
QBI15389.1|1326895_1327942_+	cupin-like domain-containing protein	NA	NA	NA	NA	NA
QBI15390.1|1327982_1329500_+	tryptophan 7-halogenase	NA	A0A1D7SF58	Cyanophage	31.8	5.8e-50
QBI15391.1|1329537_1330542_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
QBI17850.1|1330686_1331085_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17851.1|1331216_1332593_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.3	1.1e-60
QBI15392.1|1332735_1332921_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15393.1|1333182_1334580_-|protease	serine protease	protease	NA	NA	NA	NA
QBI15394.1|1335021_1336404_-	APC family permease	NA	NA	NA	NA	NA
QBI15395.1|1336596_1337361_+	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
QBI15396.1|1337674_1338616_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
QBI15397.1|1339371_1340760_+	amino acid permease	NA	NA	NA	NA	NA
QBI15398.1|1342709_1344164_-|transposase	ISL3 family transposase	transposase	A0A2D1GQC1	Lysinibacillus_phage	41.0	9.0e-93
QBI15399.1|1344120_1345023_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15400.1|1345022_1346264_-	DNA cytosine methyltransferase	NA	M1PSQ0	Streptococcus_phage	34.7	3.2e-54
QBI15401.1|1346496_1347465_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.6e-98
>prophage 8
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1416016	1478661	4745660	tRNA,protease,transposase	uncultured_Caudovirales_phage(22.22%)	49	NA	NA
QBI15472.1|1416016_1416985_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
QBI15473.1|1416987_1417281_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15474.1|1417239_1418238_-	octaprenyl-diphosphate synthase	NA	NA	NA	NA	NA
QBI15475.1|1418513_1419047_+	single-stranded DNA-binding protein	NA	L7TJL2	Pseudomonas_virus	60.9	1.9e-32
QBI15476.1|1419329_1420814_-	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.5	5.0e-14
QBI15477.1|1421107_1421815_+	NAD(P)-dependent alcohol dehydrogenase	NA	NA	NA	NA	NA
QBI15478.1|1424326_1425004_+	HAD family hydrolase	NA	NA	NA	NA	NA
QBI15479.1|1425239_1425446_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15480.1|1425540_1425765_-	putative selenoprotein	NA	NA	NA	NA	NA
QBI15481.1|1425764_1427837_-	carbon starvation protein A	NA	NA	NA	NA	NA
QBI15482.1|1428068_1428926_+	pirin family protein	NA	NA	NA	NA	NA
QBI15483.1|1429012_1429384_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15484.1|1429787_1432604_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.6	4.7e-53
QBI17857.1|1432603_1433500_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
QBI15485.1|1433496_1433961_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI17858.1|1433984_1434464_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI17859.1|1434613_1435093_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI17860.1|1435179_1436916_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
QBI17861.1|1437695_1439072_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	9.9e-65
QBI15486.1|1439722_1440319_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI15487.1|1440318_1442550_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
QBI15488.1|1443504_1443966_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15489.1|1445281_1445938_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15490.1|1446205_1446919_-	deoxyribonuclease V	NA	NA	NA	NA	NA
QBI15491.1|1447022_1447772_+	2,3-diphosphoglycerate-dependent phosphoglycerate mutase	NA	NA	NA	NA	NA
QBI17862.1|1449213_1450335_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
QBI15492.1|1450349_1451177_-	protein-glutamate O-methyltransferase CheR	NA	NA	NA	NA	NA
QBI15493.1|1451160_1452444_-	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI15494.1|1452470_1452986_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
QBI15495.1|1452996_1455153_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.5	1.4e-09
QBI15496.1|1455064_1455247_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15497.1|1455221_1457225_-	chemotaxis protein CheA	NA	NA	NA	NA	NA
QBI15498.1|1457243_1457573_-	anti-sigma factor antagonist	NA	NA	NA	NA	NA
QBI15499.1|1457603_1457831_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15500.1|1458062_1461527_-	transcription-repair coupling factor	NA	NA	NA	NA	NA
QBI15501.1|1461922_1462465_-	N-acetyltransferase	NA	NA	NA	NA	NA
QBI15502.1|1462889_1463798_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
QBI15503.1|1465328_1466141_-	peptidase C1	NA	NA	NA	NA	NA
QBI15504.1|1467086_1467698_+	N-acetyltransferase	NA	NA	NA	NA	NA
QBI17863.1|1467816_1468701_+	nitrilase	NA	NA	NA	NA	NA
QBI15505.1|1468722_1469814_+	DUF3616 domain-containing protein	NA	NA	NA	NA	NA
QBI15506.1|1469882_1471286_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
QBI15507.1|1471299_1471806_+	transcriptional repressor	NA	NA	NA	NA	NA
QBI15508.1|1472208_1472667_+	cupin domain-containing protein	NA	NA	NA	NA	NA
QBI15509.1|1473444_1473648_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15510.1|1473811_1474955_+|transposase	IS3 family transposase	transposase	U5P429	Shigella_phage	56.9	1.2e-84
QBI15511.1|1475064_1476081_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	1.9e-49
QBI17864.1|1476366_1477743_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	53.7	8.9e-74
QBI17865.1|1477770_1478661_-|protease	trypsin-like serine protease	protease	NA	NA	NA	NA
>prophage 9
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1483954	1618775	4745660	tRNA,protease,transposase	Ralstonia_phage(21.43%)	110	NA	NA
QBI15513.1|1483954_1484986_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	1.3e-74
QBI15514.1|1489558_1489969_+	MerC domain-containing protein	NA	NA	NA	NA	NA
QBI15515.1|1490268_1490451_+	30S ribosomal protein THX	NA	NA	NA	NA	NA
QBI15516.1|1490583_1491624_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
QBI15517.1|1491696_1493142_-	chloride channel protein	NA	A0A1X9I5Z9	Streptococcus_phage	31.5	6.4e-14
QBI15518.1|1494724_1495693_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	5.6e-99
QBI15519.1|1495980_1496526_-	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A1S5V092	Saudi_moumouvirus	50.6	1.6e-13
QBI17866.1|1497474_1498737_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15520.1|1498813_1499068_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15521.1|1499469_1500003_+	DUF4019 domain-containing protein	NA	NA	NA	NA	NA
QBI15522.1|1500028_1500430_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15523.1|1500519_1500762_-	RNA-binding S4 domain-containing protein	NA	NA	NA	NA	NA
QBI15524.1|1500798_1501446_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15525.1|1501474_1501972_-	sigma-70 family RNA polymerase sigma factor	NA	NA	NA	NA	NA
QBI15526.1|1502143_1504048_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	36.2	3.8e-59
QBI15527.1|1504311_1506717_+	EAL domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.3	1.6e-14
QBI15528.1|1506852_1507575_+	pseudouridine synthase	NA	NA	NA	NA	NA
QBI15529.1|1507762_1508710_-	DMT family transporter	NA	NA	NA	NA	NA
QBI15530.1|1509119_1509953_-	DUF72 domain-containing protein	NA	NA	NA	NA	NA
QBI15531.1|1510525_1511026_+	RraA family protein	NA	NA	NA	NA	NA
QBI15532.1|1510967_1512644_+	serine hydrolase	NA	NA	NA	NA	NA
QBI15533.1|1512790_1514047_+	cation:proton antiporter	NA	NA	NA	NA	NA
QBI15534.1|1514114_1515308_-	HAMP domain-containing protein	NA	W8CYF6	Bacillus_phage	23.9	3.1e-22
QBI15535.1|1515304_1515994_-	response regulator transcription factor	NA	Q6XM27	Feldmannia_irregularis_virus	29.2	1.2e-07
QBI15536.1|1516099_1517569_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
QBI15537.1|1517588_1518425_+	MipA/OmpV family protein	NA	NA	NA	NA	NA
QBI15538.1|1519549_1522606_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QBI15539.1|1522671_1523268_+	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
QBI15540.1|1523435_1525268_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.9	6.2e-30
QBI15541.1|1527626_1527983_+	aldehyde-activating protein	NA	NA	NA	NA	NA
QBI15542.1|1527979_1528789_+	DUF4349 domain-containing protein	NA	NA	NA	NA	NA
QBI15543.1|1528851_1529820_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI15544.1|1530143_1530437_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15545.1|1530515_1530929_-	DUF2867 domain-containing protein	NA	NA	NA	NA	NA
QBI17867.1|1531620_1532607_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
QBI15546.1|1532657_1532891_-	DUF378 domain-containing protein	NA	NA	NA	NA	NA
QBI15547.1|1533364_1533658_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15548.1|1534550_1535000_-	DUF4442 domain-containing protein	NA	NA	NA	NA	NA
QBI15549.1|1535265_1536123_-	thioredoxin	NA	A0A1J0GW78	Streptomyces_phage	41.8	1.0e-11
QBI15550.1|1536327_1536939_+	DUF998 domain-containing protein	NA	NA	NA	NA	NA
QBI15551.1|1537037_1539680_+|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	40.0	4.7e-172
QBI15552.1|1540193_1540829_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15553.1|1540851_1541880_+	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
QBI15554.1|1541876_1542776_+	nicotinate-nucleotide adenylyltransferase	NA	NA	NA	NA	NA
QBI15555.1|1542832_1543249_+	ribosome silencing factor	NA	NA	NA	NA	NA
QBI15556.1|1543260_1544376_+	J domain-containing protein	NA	NA	NA	NA	NA
QBI15557.1|1545465_1545936_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
QBI15558.1|1546373_1547048_-	energy transducer TonB	NA	NA	NA	NA	NA
QBI15559.1|1547357_1550468_-	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI15560.1|1550934_1551663_-	SIMPL domain-containing protein	NA	NA	NA	NA	NA
QBI15561.1|1551801_1552374_+	Maf-like protein	NA	NA	NA	NA	NA
QBI15562.1|1552373_1553873_+	ribonuclease G	NA	NA	NA	NA	NA
QBI15563.1|1554013_1557934_+	TIGR02099 family protein	NA	NA	NA	NA	NA
QBI17868.1|1557939_1558692_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15564.1|1558790_1560236_+|protease	metalloprotease TldD	protease	NA	NA	NA	NA
QBI15565.1|1560492_1561074_-	ribosome-associated protein	NA	NA	NA	NA	NA
QBI15566.1|1561219_1562587_+|protease	metalloprotease PmbA	protease	NA	NA	NA	NA
QBI17869.1|1562661_1563066_+	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
QBI15567.1|1563117_1563579_+	DUF4870 domain-containing protein	NA	NA	NA	NA	NA
QBI15568.1|1563648_1564746_-|protease	protease	protease	NA	NA	NA	NA
QBI15569.1|1565152_1565950_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI15570.1|1566062_1566938_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
QBI15571.1|1566939_1567200_-	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
QBI15572.1|1567231_1568536_-|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
QBI15573.1|1568569_1570276_-	alkaline phosphatase	NA	NA	NA	NA	NA
QBI15574.1|1570418_1571759_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
QBI15575.1|1571768_1572605_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QBI15576.1|1572611_1572839_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15577.1|1572851_1573343_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
QBI15578.1|1573550_1574300_-	NlpC/P60 family protein	NA	A0A0K2SUC1	Clostridium_phage	38.5	1.2e-19
QBI17870.1|1574409_1574946_-	NlpC/P60 family protein	NA	A0A1V0DZX6	Clostridioides_phage	40.5	3.2e-19
QBI15579.1|1575056_1575536_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
QBI15580.1|1575764_1577009_+	DUF418 domain-containing protein	NA	NA	NA	NA	NA
QBI15581.1|1577016_1578267_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
QBI15582.1|1578263_1579634_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.8	2.4e-34
QBI17871.1|1581191_1581488_+	cysteine methyltransferase	NA	NA	NA	NA	NA
QBI15583.1|1581528_1582227_+|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
QBI15584.1|1582477_1583446_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
QBI15585.1|1584029_1585055_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	1.9e-49
QBI15586.1|1586172_1586634_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15587.1|1587450_1589466_-	M13 family peptidase	NA	NA	NA	NA	NA
QBI15588.1|1590135_1591152_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	3.3e-49
QBI15589.1|1591548_1592517_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI15590.1|1592627_1593170_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15591.1|1593535_1594387_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
QBI15592.1|1594482_1595052_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	74.9	4.5e-72
QBI17872.1|1595086_1595272_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15593.1|1595417_1595846_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15594.1|1595848_1596817_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI15595.1|1596976_1597144_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15596.1|1597171_1597606_-	HIT family protein	NA	NA	NA	NA	NA
QBI15597.1|1597602_1598265_-	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
QBI15598.1|1598445_1599810_+	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
QBI15599.1|1599872_1600841_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	3.3e-99
QBI15600.1|1601488_1602001_-	transcription elongation factor GreB	NA	NA	NA	NA	NA
QBI17873.1|1602159_1603261_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.2	2.3e-40
QBI15601.1|1603482_1604499_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	2.5e-49
QBI17874.1|1604575_1605154_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15602.1|1605173_1606679_-	DUF853 family protein	NA	A0A248XCZ8	Klebsiella_phage	45.4	5.5e-85
QBI15603.1|1606868_1607054_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15604.1|1606973_1608557_+	LysM peptidoglycan-binding domain-containing protein	NA	I1VXB7	Halocynthia_phage	30.6	4.7e-10
QBI15605.1|1609106_1609955_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
QBI15606.1|1609951_1610602_-	SCO family protein	NA	NA	NA	NA	NA
QBI15607.1|1610682_1611609_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
QBI15608.1|1611619_1612723_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	40.7	1.4e-74
QBI15609.1|1612715_1613789_+	D-glycerate dehydrogenase	NA	M1HTA3	Paramecium_bursaria_Chlorella_virus	24.1	1.2e-14
QBI15610.1|1613872_1614898_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
QBI17875.1|1615358_1617425_+	ferrous iron transporter B	NA	NA	NA	NA	NA
QBI15611.1|1617421_1617829_+	VOC family protein	NA	NA	NA	NA	NA
QBI15612.1|1618001_1618775_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
>prophage 10
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1696964	1704255	4745660		Vibrio_phage(16.67%)	15	NA	NA
QBI15682.1|1696964_1698320_+	DNA cytosine methyltransferase	NA	A0A2I7RFJ9	Vibrio_phage	37.0	3.1e-55
QBI15683.1|1698490_1698682_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15684.1|1698881_1699322_+	hypothetical protein	NA	A0A0H5AUD0	Pseudomonas_phage	45.6	1.3e-26
QBI15685.1|1699318_1700383_+	site-specific DNA-methyltransferase	NA	A0A060D598	Salmonella_phage	46.7	7.9e-78
QBI15686.1|1700382_1700568_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15687.1|1700567_1701011_+	HNH endonuclease	NA	NA	NA	NA	NA
QBI15688.1|1701007_1701328_+	DUF1364 family protein	NA	Q8W6N7	Burkholderia_virus	47.9	7.2e-11
QBI15689.1|1701324_1701624_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15690.1|1701620_1701821_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15691.1|1701813_1702200_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15692.1|1702196_1702436_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15693.1|1702432_1702906_+	hypothetical protein	NA	R9ZZU8	Cellulophaga_phage	47.5	8.1e-27
QBI15694.1|1702902_1703136_+	DUF3310 domain-containing protein	NA	NA	NA	NA	NA
QBI15695.1|1703132_1703582_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15696.1|1703772_1704255_+	hypothetical protein	NA	A0A0M3LSH2	Mannheimia_phage	54.3	4.1e-42
>prophage 11
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1707397	1716258	4745660		Xylella_phage(66.67%)	11	NA	NA
QBI15703.1|1707397_1709470_+	hypothetical protein	NA	C8CLI5	Xylella_phage	44.3	4.5e-138
QBI15704.1|1709477_1710383_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15705.1|1710398_1711607_+	hypothetical protein	NA	A0A1B1IR95	uncultured_Mediterranean_phage	33.0	1.6e-47
QBI15706.1|1711618_1711831_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15707.1|1711840_1712152_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15708.1|1712213_1712618_+	hypothetical protein	NA	C8CLI8	Xylella_phage	50.4	2.6e-26
QBI15709.1|1712617_1713982_+	hypothetical protein	NA	C8CLI9	Xylella_phage	49.2	3.1e-119
QBI15710.1|1714065_1714932_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15711.1|1714928_1715150_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15712.1|1715152_1715614_+	hypothetical protein	NA	I3PUW8	Vibrio_phage	37.3	1.9e-20
QBI15713.1|1715610_1716258_+	hypothetical protein	NA	C8CLJ1	Xylella_phage	48.0	3.2e-26
>prophage 12
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1745858	1756934	4745660		Xylella_phage(71.43%)	12	NA	NA
QBI15746.1|1745858_1746602_+	hypothetical protein	NA	C8CLI5	Xylella_phage	46.8	2.8e-34
QBI15747.1|1746609_1747515_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15748.1|1747530_1748739_+	hypothetical protein	NA	A0A1B1IR95	uncultured_Mediterranean_phage	33.0	1.6e-47
QBI15749.1|1748750_1748963_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15750.1|1748972_1749284_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15751.1|1749299_1749749_+	hypothetical protein	NA	C8CLI8	Xylella_phage	49.5	7.0e-20
QBI15752.1|1749748_1752064_+	hypothetical protein	NA	C8CLI9	Xylella_phage	47.1	2.1e-120
QBI15753.1|1752060_1752282_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15754.1|1752284_1752746_+	hypothetical protein	NA	I3PUW8	Vibrio_phage	37.3	1.9e-20
QBI15755.1|1752742_1753390_+	hypothetical protein	NA	C8CLJ1	Xylella_phage	48.0	3.2e-26
QBI15756.1|1753389_1754841_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15757.1|1754843_1756934_+	hypothetical protein	NA	C8CLJ3	Xylella_phage	32.0	1.7e-07
>prophage 13
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1782938	1816582	4745660	tRNA,protease,transposase,integrase	Leptospira_phage(33.33%)	24	1773986:1774001	1816922:1816937
1773986:1774001	attL	GCGCGCACCGTCCAGC	NA	NA	NA	NA
QBI15781.1|1782938_1783736_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI17885.1|1783931_1785033_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.4	2.9e-43
QBI17886.1|1785452_1785920_-	TonB family protein	NA	NA	NA	NA	NA
QBI15782.1|1786350_1787319_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	3.0e-100
QBI15783.1|1787440_1788208_-	energy transducer TonB	NA	NA	NA	NA	NA
QBI15784.1|1788214_1789606_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	49.6	1.0e-93
QBI15785.1|1790066_1790651_-	FMN-dependent NADH-azoreductase	NA	NA	NA	NA	NA
QBI15786.1|1790750_1791767_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI17887.1|1792390_1793809_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
QBI15787.1|1793904_1794147_+	PbsX family transcriptional regulator	NA	NA	NA	NA	NA
QBI15788.1|1794140_1794482_+	toxin MazF	NA	NA	NA	NA	NA
QBI17888.1|1795033_1796134_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	7.2e-42
QBI15789.1|1801156_1803268_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	32.2	1.3e-15
QBI17889.1|1805660_1806005_-	response regulator	NA	NA	NA	NA	NA
QBI15790.1|1806307_1807825_+	circadian clock protein KaiC	NA	NA	NA	NA	NA
QBI15791.1|1807811_1809884_+	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
QBI15792.1|1810028_1810730_-	C-type cytochrome biogenesis protein	NA	NA	NA	NA	NA
QBI17890.1|1810729_1811227_-	cytochrome c-type biogenesis protein CcmH	NA	NA	NA	NA	NA
QBI15793.1|1811226_1811769_-	DsbE family thiol:disulfide interchange protein	NA	NA	NA	NA	NA
QBI15794.1|1811765_1813754_-	heme lyase CcmF/NrfE family subunit	NA	NA	NA	NA	NA
QBI15795.1|1813817_1814288_-	cytochrome c biogenesis protein CcmE	NA	NA	NA	NA	NA
QBI15796.1|1814284_1814491_-	heme exporter protein CcmD	NA	NA	NA	NA	NA
QBI15797.1|1814487_1815246_-	heme ABC transporter permease	NA	NA	NA	NA	NA
QBI15798.1|1815256_1816582_-|protease	serine protease	protease	A0A217EQY2	Bacillus_phage	36.7	4.0e-23
1816922:1816937	attR	GCGCGCACCGTCCAGC	NA	NA	NA	NA
>prophage 14
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1875678	1885566	4745660	tRNA	Micromonas_sp._RCC1109_virus(16.67%)	8	NA	NA
QBI17897.1|1875678_1877355_+	2-polyprenylphenol 6-hydroxylase	NA	E5EQ95	Micromonas_sp._RCC1109_virus	27.3	2.1e-37
QBI17896.1|1877443_1878085_+	LexA repressor 2	NA	A0A1W6JNS2	Morganella_phage	40.2	2.4e-13
QBI15852.1|1878257_1879292_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.0	1.6e-112
QBI17898.1|1879360_1879582_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15853.1|1879593_1880082_+	recombination regulator RecX	NA	NA	NA	NA	NA
QBI15854.1|1880183_1882832_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.8	2.4e-83
QBI15855.1|1882971_1883184_+	carbon storage regulator	NA	J7I430	Pseudomonas_phage	76.5	1.3e-13
QBI15856.1|1885074_1885566_+	lysozyme	NA	D5LH07	Escherichia_phage	67.1	1.7e-56
>prophage 15
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	1994080	2073376	4745660	tRNA,transposase	uncultured_Caudovirales_phage(42.11%)	46	NA	NA
QBI17909.1|1994080_1995183_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.0	1.5e-42
QBI17910.1|1995207_1995516_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15946.1|1995759_1996962_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
QBI15947.1|1996958_1997678_+	MOSC domain-containing protein	NA	NA	NA	NA	NA
QBI15948.1|1998109_1998826_+	4-hydroxy-tetrahydrodipicolinate reductase	NA	NA	NA	NA	NA
QBI15949.1|1999065_2000190_+	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	31.9	4.6e-44
QBI15950.1|2000189_2000633_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15951.1|2000641_2003884_+	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
QBI15952.1|2003880_2004357_+	transcription elongation factor GreA	NA	NA	NA	NA	NA
QBI15953.1|2004373_2005294_+	phosphoglycerate mutase	NA	NA	NA	NA	NA
QBI15954.1|2005290_2007030_+	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.0	4.6e-43
QBI17911.1|2008483_2009698_-	acyltransferase	NA	NA	NA	NA	NA
QBI15955.1|2009857_2010805_+	LytTR family transcriptional regulator	NA	NA	NA	NA	NA
QBI15956.1|2011058_2012183_+	peptide chain release factor 2	NA	A0A0S4KWG0	Pseudomonas_phage	39.7	9.4e-05
QBI15957.1|2012388_2013906_+|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	38.5	8.6e-86
QBI15958.1|2014047_2015184_+	two-component system response regulator	NA	NA	NA	NA	NA
QBI15959.1|2015185_2015524_+	hypothetical protein	NA	NA	NA	NA	NA
QBI15960.1|2015548_2017726_+	response regulator	NA	A0A1V0SGX0	Hokovirus	33.1	1.3e-47
QBI15961.1|2017737_2018607_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
QBI15962.1|2018783_2020466_-	long-chain fatty acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	26.0	1.0e-31
QBI15963.1|2021114_2023883_-	aconitate hydratase AcnA	NA	NA	NA	NA	NA
QBI15964.1|2024030_2024279_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
QBI15965.1|2024275_2024686_+	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
QBI15966.1|2024751_2027343_+	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
QBI15967.1|2027696_2028512_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
QBI15968.1|2029167_2031411_-	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI15969.1|2031519_2032596_-	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
QBI15970.1|2032592_2033189_-	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
QBI15971.1|2033185_2034052_-	chemotaxis protein CheR	NA	NA	NA	NA	NA
QBI15972.1|2034297_2036688_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	58.3	3.9e-08
QBI17912.1|2036766_2037111_-	hypothetical protein	NA	NA	NA	NA	NA
QBI15973.1|2037465_2037948_-	chemotaxis protein CheW	NA	NA	NA	NA	NA
QBI15974.1|2038083_2038881_-	flagellar brake protein	NA	NA	NA	NA	NA
QBI15975.1|2039922_2042184_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	54.5	1.3e-10
QBI15976.1|2042595_2044857_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	2.5e-12
QBI15977.1|2045447_2047922_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	47.4	1.9e-10
QBI15978.1|2047967_2048999_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	7.9e-75
QBI15979.1|2052026_2054270_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.8	3.4e-14
QBI17913.1|2054779_2056156_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI15980.1|2056437_2058651_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	63.2	1.9e-09
QBI15981.1|2058848_2061218_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.7	2.7e-09
QBI15982.1|2061231_2061993_-	transporter	NA	NA	NA	NA	NA
QBI15983.1|2067500_2069762_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	61.4	2.8e-08
QBI15984.1|2069880_2070897_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	2.5e-49
QBI15985.1|2070873_2071660_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI15986.1|2072344_2073376_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
>prophage 16
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	2277679	2406036	4745660	plate,transposase	Tupanvirus(53.33%)	46	NA	NA
QBI16115.1|2277679_2278081_-|transposase	transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	37.1	2.6e-10
QBI16116.1|2278133_2282444_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	25.7	4.9e-54
QBI16117.1|2282522_2285144_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	24.9	4.0e-67
QBI16118.1|2285089_2285797_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16119.1|2286027_2298861_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	25.1	6.1e-132
QBI16120.1|2298551_2305508_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	25.3	9.5e-132
QBI16121.1|2305513_2309719_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	23.6	1.6e-97
QBI16122.1|2309670_2315130_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	24.7	1.5e-68
QBI16123.1|2314820_2327924_-	amino acid adenylation domain-containing protein	NA	A0A2K9KZV5	Tupanvirus	25.0	6.6e-134
QBI16124.1|2327920_2342407_-	non-ribosomal peptide synthetase	NA	A0A2K9KZV5	Tupanvirus	24.9	1.4e-124
QBI16125.1|2342537_2342783_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16126.1|2342938_2344033_+	type III polyketide synthase	NA	NA	NA	NA	NA
QBI16127.1|2344072_2344816_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
QBI16128.1|2344812_2346090_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
QBI16129.1|2346077_2347433_+	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
QBI16130.1|2347429_2348227_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
QBI16131.1|2348303_2350010_+	cyclic peptide export ABC transporter	NA	Q9EMR9	Amsacta_moorei_entomopoxvirus	22.4	2.0e-06
QBI16132.1|2350108_2350327_+	MbtH family NRPS accessory protein	NA	NA	NA	NA	NA
QBI16133.1|2350709_2352293_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
QBI16134.1|2356300_2359426_-	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QBI16135.1|2359477_2360590_-	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI16136.1|2360713_2361292_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16137.1|2363852_2365940_+	type III effector	NA	NA	NA	NA	NA
QBI16138.1|2367877_2370967_+	histidine kinase	NA	NA	NA	NA	NA
QBI17934.1|2373251_2373959_+	response regulator	NA	NA	NA	NA	NA
QBI16139.1|2373955_2374948_+	c-type cytochrome	NA	NA	NA	NA	NA
QBI16140.1|2374944_2377404_+	two-component system VirA-like sensor kinase	NA	NA	NA	NA	NA
QBI16141.1|2377517_2378498_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16142.1|2378506_2379535_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
QBI16143.1|2379707_2380034_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16144.1|2380030_2382934_-	serine/threonine protein kinase	NA	A0A2R8FF19	Brazilian_cedratvirus	25.0	1.9e-09
QBI16145.1|2382930_2383653_-	serine/threonine-protein phosphatase	NA	NA	NA	NA	NA
QBI16146.1|2383649_2384297_-	type VI secretion system-associated protein TagF	NA	NA	NA	NA	NA
QBI16147.1|2384293_2387752_-	type VI secretion system membrane subunit TssM	NA	NA	NA	NA	NA
QBI16148.1|2387755_2389072_-	type VI secretion system protein TssL	NA	NA	NA	NA	NA
QBI16149.1|2389073_2390411_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
QBI16150.1|2390407_2391796_-	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
QBI16151.1|2391792_2392332_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16152.1|2392340_2394278_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	28.6	7.7e-39
QBI16153.1|2394541_2395003_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16154.1|2395105_2395309_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16155.1|2397277_2398294_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	2.5e-49
QBI16156.1|2398970_2399939_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	5.6e-99
QBI16157.1|2400380_2403152_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	29.3	1.2e-77
QBI16158.1|2403184_2404195_-|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
QBI16159.1|2404158_2406036_-|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
>prophage 17
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	2636534	2806281	4745660	tRNA,protease,transposase	Ralstonia_phage(20.69%)	110	NA	NA
QBI16332.1|2636534_2637602_+|tRNA	tRNA epoxyqueuosine(34) reductase QueG	tRNA	NA	NA	NA	NA
QBI16333.1|2637746_2639084_+	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	35.8	6.5e-37
QBI16334.1|2639379_2640642_-	virulence factor	NA	NA	NA	NA	NA
QBI16335.1|2641111_2642080_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
QBI16336.1|2642082_2642298_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16337.1|2642460_2644296_-	formylglycine-generating enzyme family protein	NA	A0A075BSL8	Microcystis_phage	33.1	9.5e-23
QBI16338.1|2644567_2645659_+	ribonuclease D	NA	NA	NA	NA	NA
QBI16339.1|2647708_2647873_-	DUF3606 domain-containing protein	NA	NA	NA	NA	NA
QBI16340.1|2648097_2648499_+	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
QBI16341.1|2649309_2650395_+	sensor domain-containing diguanylate cyclase	NA	NA	NA	NA	NA
QBI16342.1|2650437_2650947_-	purine-binding chemotaxis protein CheW	NA	NA	NA	NA	NA
QBI16343.1|2650958_2652617_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	26.6	2.7e-08
QBI16344.1|2655677_2656094_+	DUF3301 domain-containing protein	NA	NA	NA	NA	NA
QBI16345.1|2656665_2657106_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	46.0	7.1e-25
QBI16346.1|2657184_2657820_-	stringent starvation protein A	NA	NA	NA	NA	NA
QBI17953.1|2658215_2658959_-	cytochrome c1	NA	NA	NA	NA	NA
QBI16347.1|2658966_2660226_-	cytochrome bc complex cytochrome b subunit	NA	NA	NA	NA	NA
QBI16348.1|2660225_2660870_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
QBI17954.1|2661397_2662384_-	lytic transglycosylase domain-containing protein	NA	A0A0H3V0Q1	Geobacillus_virus	56.0	1.3e-29
QBI16349.1|2663736_2664030_+	glutathione S-transferase family protein	NA	NA	NA	NA	NA
QBI16350.1|2664046_2664286_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16351.1|2664324_2665779_+|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
QBI16352.1|2666202_2667189_+	PhoH family protein	NA	A0A1B2ICF6	Erwinia_phage	47.7	4.8e-45
QBI17955.1|2667573_2668263_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16353.1|2668317_2668803_+	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
QBI16354.1|2668802_2669321_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16355.1|2669415_2670294_+	CBS domain-containing protein	NA	NA	NA	NA	NA
QBI16356.1|2670290_2671571_+	DUF4105 domain-containing protein	NA	NA	NA	NA	NA
QBI16357.1|2671586_2672588_+	magnesium and cobalt transport protein CorA	NA	NA	NA	NA	NA
QBI16358.1|2672739_2674104_-	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
QBI16359.1|2674578_2675427_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
QBI16360.1|2675423_2676335_-	ABC transporter permease subunit	NA	NA	NA	NA	NA
QBI16361.1|2676463_2677597_-	polyamine ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.3	7.4e-26
QBI16362.1|2677742_2679254_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
QBI16363.1|2679240_2680827_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
QBI16364.1|2680823_2682026_-	HlyD family secretion protein	NA	NA	NA	NA	NA
QBI16365.1|2682874_2683843_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	3.6e-98
QBI16366.1|2686462_2687848_-	glutamine synthetase	NA	NA	NA	NA	NA
QBI16367.1|2688494_2689874_+	glutamine synthetase	NA	NA	NA	NA	NA
QBI16368.1|2689873_2691190_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
QBI17956.1|2691326_2692577_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	35.9	4.8e-18
QBI16369.1|2692882_2694163_-	MFS transporter	NA	NA	NA	NA	NA
QBI17957.1|2694464_2694773_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16370.1|2694732_2697081_-	FdhF/YdeP family oxidoreductase	NA	NA	NA	NA	NA
QBI16371.1|2697077_2697923_-	formate dehydrogenase accessory sulfurtransferase FdhD	NA	NA	NA	NA	NA
QBI16372.1|2697929_2699609_-	MFS transporter	NA	NA	NA	NA	NA
QBI16373.1|2700137_2701490_+	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
QBI16374.1|2701550_2704682_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16375.1|2704846_2705701_+	plasmid replication/partition related protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	38.7	3.2e-13
QBI16376.1|2705871_2707176_+	DUF445 family protein	NA	NA	NA	NA	NA
QBI16377.1|2711443_2712430_+	response regulator	NA	W8CYM9	Bacillus_phage	26.8	4.8e-05
QBI16378.1|2712614_2713583_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI16379.1|2714375_2715719_+	MFS transporter	NA	NA	NA	NA	NA
QBI16380.1|2715601_2716111_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16381.1|2717266_2717425_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16382.1|2717816_2718074_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17958.1|2718084_2719452_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.8	3.1e-79
QBI16383.1|2719642_2720059_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16384.1|2720169_2721138_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI17959.1|2721435_2722537_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	2.2e-43
QBI16385.1|2722768_2727778_-	NAD-glutamate dehydrogenase	NA	NA	NA	NA	NA
QBI16386.1|2728055_2728715_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16387.1|2728729_2730037_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI16388.1|2730049_2733220_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QBI16389.1|2735911_2736907_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QBI16390.1|2737067_2739584_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	28.5	6.3e-09
QBI16391.1|2739580_2740537_+	1-phosphofructokinase	NA	NA	NA	NA	NA
QBI16392.1|2740695_2742438_+	PTS fructose transporter subunit EIIBC	NA	NA	NA	NA	NA
QBI17960.1|2742756_2743893_+	carbohydrate porin	NA	NA	NA	NA	NA
QBI17961.1|2747318_2748044_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16393.1|2748055_2751040_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16394.1|2751036_2751780_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17962.1|2752396_2753773_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	9.2e-63
QBI17963.1|2754112_2755214_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	2.2e-43
QBI16395.1|2755422_2756391_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	29.9	6.8e-28
QBI16396.1|2756504_2758349_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
QBI16397.1|2758539_2758893_-	preprotein translocase subunit YajC	NA	NA	NA	NA	NA
QBI16398.1|2759024_2760170_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	46.2	2.2e-86
QBI16399.1|2760239_2761310_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
QBI16400.1|2761475_2761907_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
QBI16401.1|2762029_2763526_+	aminotransferase class III-fold pyridoxal phosphate-dependent enzyme	NA	NA	NA	NA	NA
QBI16402.1|2763874_2764582_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16403.1|2764717_2765167_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16404.1|2765449_2766571_-	phytase	NA	NA	NA	NA	NA
QBI16405.1|2770353_2770986_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
QBI16406.1|2771339_2773133_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
QBI16407.1|2773129_2773414_-	YfhL family 4Fe-4S dicluster ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	57.0	1.4e-18
QBI16408.1|2773404_2773587_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17964.1|2773645_2774131_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16409.1|2774189_2774696_-	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	41.8	2.1e-25
QBI16410.1|2774692_2775313_-	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
QBI16411.1|2775552_2777457_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.7	3.0e-112
QBI17965.1|2778069_2779446_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	5.1e-61
QBI16412.1|2781424_2781811_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16413.1|2781869_2784215_-	S9 family peptidase	NA	NA	NA	NA	NA
QBI16414.1|2784537_2786124_-	glycosyl hydrolase family 43	NA	NA	NA	NA	NA
QBI16415.1|2786120_2790479_-	carbohydrate-binding protein	NA	NA	NA	NA	NA
QBI16416.1|2790717_2793555_-	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	25.7	1.3e-47
QBI16417.1|2794033_2796391_-	Tat pathway signal protein	NA	NA	NA	NA	NA
QBI16418.1|2796661_2796880_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16419.1|2796854_2798426_+	peptidase S53	NA	A0A1V0SLL0	Klosneuvirus	37.6	4.7e-71
QBI16420.1|2798633_2798930_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16421.1|2798926_2799232_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16422.1|2799274_2799865_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16423.1|2799840_2800113_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16424.1|2800112_2800328_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16425.1|2800370_2800658_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16426.1|2803026_2803995_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI16427.1|2804157_2805178_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.5	8.8e-95
QBI16428.1|2805330_2806281_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	2951195	3013948	4745660	transposase	Bacillus_phage(18.75%)	47	NA	NA
QBI16545.1|2951195_2952164_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI16546.1|2953667_2954570_-	CAP domain-containing protein	NA	NA	NA	NA	NA
QBI16547.1|2954767_2956135_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	47.7	4.8e-112
QBI16548.1|2956386_2956899_+	DUF3060 domain-containing protein	NA	NA	NA	NA	NA
QBI16549.1|2956828_2957068_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
QBI16550.1|2957410_2958910_+	cupin domain-containing protein	NA	NA	NA	NA	NA
QBI16551.1|2958906_2959839_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QBI16552.1|2960019_2962848_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
QBI16553.1|2962890_2964093_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
QBI16554.1|2964334_2965771_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	26.8	3.7e-38
QBI16555.1|2965969_2966563_+	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	27.5	1.6e-11
QBI16556.1|2966827_2967421_+	YigZ family protein	NA	A0A1X9I5T8	Streptococcus_phage	41.2	8.1e-16
QBI16557.1|2967417_2969187_+	ATP-binding cassette domain-containing protein	NA	W8CYL7	Bacillus_phage	30.5	5.2e-58
QBI16558.1|2969429_2970284_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16559.1|2970280_2971684_+	TolC family protein	NA	NA	NA	NA	NA
QBI16560.1|2972035_2972230_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16561.1|2972509_2973631_-	prephenate dehydrogenase	NA	NA	NA	NA	NA
QBI16562.1|2973627_2974545_-	pyridoxal kinase	NA	NA	NA	NA	NA
QBI16563.1|2975072_2976203_-	molecular chaperone DnaJ	NA	Q8QNB4	Ectocarpus_siliculosus_virus	30.3	1.8e-24
QBI16564.1|2976362_2978288_-	molecular chaperone DnaK	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	50.6	2.2e-147
QBI16565.1|2978429_2978948_-	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
QBI16566.1|2979048_2980101_-	heat-inducible transcriptional repressor HrcA	NA	NA	NA	NA	NA
QBI16567.1|2980217_2981882_+	DNA repair protein RecN	NA	NA	NA	NA	NA
QBI16568.1|2982324_2982750_-	ferric iron uptake transcriptional regulator	NA	NA	NA	NA	NA
QBI16569.1|2982839_2983235_+	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
QBI16570.1|2983581_2983857_-	RnfH family protein	NA	NA	NA	NA	NA
QBI16571.1|2983870_2984302_-	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
QBI16572.1|2984362_2984866_+	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	41.9	5.8e-23
QBI16573.1|2985009_2987457_-	serine peptidase	NA	A0A218KC60	Bacillus_phage	26.7	2.6e-15
QBI16574.1|2989206_2990175_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	5.1e-100
QBI17975.1|2990397_2991774_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	9.9e-65
QBI17976.1|2992542_2993235_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16575.1|2993353_2993779_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17977.1|2994157_2995259_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	5.0e-43
QBI16576.1|2996238_2996487_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16577.1|2996763_2997918_+	2-aminoethylphosphonate--pyruvate transaminase	NA	NA	NA	NA	NA
QBI16578.1|2997917_2999240_+	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	NA	NA	NA	NA	NA
QBI17978.1|2999266_3000307_+	dihydrorhizobitoxine desaturase	NA	NA	NA	NA	NA
QBI16579.1|3000324_3001185_+	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	NA	NA	NA	NA	NA
QBI17979.1|3001220_3001820_+	LysE family translocator	NA	NA	NA	NA	NA
QBI16580.1|3001886_3002822_+	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
QBI17980.1|3002887_3004240_+	glutamine synthetase	NA	NA	NA	NA	NA
QBI17981.1|3004788_3006165_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.1	1.9e-76
QBI16581.1|3009125_3010100_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	37.0	2.6e-19
QBI16582.1|3011962_3012688_-	OmpA family protein	NA	G3M9Z0	Bacillus_virus	33.9	1.8e-09
QBI17982.1|3012697_3012877_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16583.1|3013150_3013948_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	3026731	3096006	4745660	tRNA,protease,coat,transposase	Ralstonia_phage(20.0%)	53	NA	NA
QBI16592.1|3026731_3027562_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
QBI16593.1|3027634_3028063_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16594.1|3028194_3028674_+	glycine zipper 2TM domain-containing protein	NA	NA	NA	NA	NA
QBI16595.1|3028924_3029140_-	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	59.7	6.5e-16
QBI16596.1|3029106_3029340_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16597.1|3029367_3029853_+	DUF456 domain-containing protein	NA	NA	NA	NA	NA
QBI16598.1|3032471_3034703_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	59.7	1.5e-09
QBI17983.1|3034846_3036223_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
QBI16599.1|3037341_3038310_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	5.6e-99
QBI16600.1|3038631_3039705_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16601.1|3039877_3040846_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	1.5e-99
QBI16602.1|3041936_3042572_-	glutathione S-transferase family protein	NA	NA	NA	NA	NA
QBI16603.1|3042707_3044225_-	fumarate hydratase	NA	NA	NA	NA	NA
QBI16604.1|3044558_3046439_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	38.9	5.2e-24
QBI16605.1|3046626_3047406_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
QBI16606.1|3047487_3047973_-	glutathione peroxidase	NA	A0A1S7DM81	Molluscum_contagiosum_virus	36.2	2.8e-14
QBI16607.1|3047950_3048199_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16608.1|3050430_3050670_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16609.1|3050919_3051633_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16610.1|3053146_3053653_+	RNA polymerase sigma factor	NA	NA	NA	NA	NA
QBI17984.1|3053814_3054393_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16611.1|3054484_3054985_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16612.1|3055051_3055861_-	DUF4163 domain-containing protein	NA	NA	NA	NA	NA
QBI16613.1|3055946_3056225_-	N-acetyltransferase	NA	NA	NA	NA	NA
QBI16614.1|3056444_3056633_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16615.1|3057046_3057655_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
QBI16616.1|3058851_3060669_+	peptidase M14	NA	NA	NA	NA	NA
QBI17985.1|3060797_3062987_+	glycosyl hydrolase	NA	NA	NA	NA	NA
QBI16617.1|3063432_3064230_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI16618.1|3064416_3064632_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16619.1|3066096_3067677_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
QBI16620.1|3067683_3068877_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI16621.1|3068899_3070405_-	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
QBI17986.1|3070401_3070842_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16622.1|3070964_3071816_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBI16623.1|3071876_3074120_+	DNA topoisomerase IV subunit A	NA	G3M9Z5	Bacillus_virus	34.6	7.2e-81
QBI16624.1|3074565_3075051_-	bacterioferritin	NA	NA	NA	NA	NA
QBI16625.1|3075197_3077615_+	penicillin acylase family protein	NA	NA	NA	NA	NA
QBI16626.1|3077587_3077860_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16627.1|3078197_3080324_+	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
QBI16628.1|3080812_3081865_+	right-handed parallel beta-helix repeat-containing protein	NA	NA	NA	NA	NA
QBI16629.1|3081933_3083628_-	asparagine synthase B	NA	A0A0P0C1V4	Ostreococcus_lucimarinus_virus	38.8	1.3e-87
QBI16630.1|3083922_3085053_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
QBI16631.1|3085057_3085573_-	GNAT family N-acetyltransferase	NA	A0A1X9I687	Streptococcus_phage	36.9	1.6e-20
QBI16632.1|3085569_3085926_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
QBI16633.1|3085922_3086393_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16634.1|3086389_3087586_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
QBI16635.1|3087602_3090212_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
QBI16636.1|3090208_3090985_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
QBI16637.1|3091303_3091828_+	SCPU domain-containing protein	NA	NA	NA	NA	NA
QBI16638.1|3091836_3092607_+	molecular chaperone	NA	NA	NA	NA	NA
QBI16639.1|3092623_3094975_+	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
QBI16640.1|3094971_3096006_+|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
>prophage 20
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	3223599	3311256	4745660	protease,transposase	Acidithiobacillus_phage(26.67%)	52	NA	NA
QBI17991.1|3223599_3224976_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	1.2e-62
QBI16743.1|3225890_3226244_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16744.1|3226410_3228342_-	alpha-L-fucosidase	NA	NA	NA	NA	NA
QBI17992.1|3229677_3233226_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	33.3	2.6e-45
QBI17993.1|3233719_3237286_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	33.3	7.7e-45
QBI17994.1|3237351_3240909_-	hybrid sensor histidine kinase/response regulator	NA	A0A1V0SGX0	Hokovirus	30.7	8.3e-39
QBI16745.1|3244879_3245542_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
QBI16746.1|3245538_3246102_+	cytochrome b	NA	NA	NA	NA	NA
QBI16747.1|3246111_3246681_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
QBI17995.1|3246998_3247388_+	excalibur calcium-binding domain-containing protein	NA	NA	NA	NA	NA
QBI16748.1|3247473_3247707_-	glutaredoxin family protein	NA	NA	NA	NA	NA
QBI16749.1|3247794_3249177_+	L-serine ammonia-lyase	NA	NA	NA	NA	NA
QBI16750.1|3250944_3252162_-	O-succinylhomoserine (thiol)-lyase	NA	NA	NA	NA	NA
QBI16751.1|3252158_3253190_-	homoserine O-succinyltransferase	NA	NA	NA	NA	NA
QBI16752.1|3253520_3254408_+	M23 family metallopeptidase	NA	S5M424	Bacillus_phage	30.6	3.0e-06
QBI16753.1|3254540_3256145_+	peptide chain release factor 3	NA	NA	NA	NA	NA
QBI16754.1|3256220_3256865_+	hemolysin III family protein	NA	NA	NA	NA	NA
QBI17996.1|3258469_3259846_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.5	2.0e-78
QBI16755.1|3260273_3260702_-	CBS domain-containing protein	NA	NA	NA	NA	NA
QBI16756.1|3260661_3261708_-	glycosyltransferase	NA	F1C5B0	Cronobacter_phage	42.6	1.3e-72
QBI16757.1|3261710_3262448_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
QBI16758.1|3262522_3263413_+	Hsp33 family molecular chaperone HslO	NA	NA	NA	NA	NA
QBI16759.1|3264797_3267707_+	TonB-dependent receptor	NA	A0A0P0I887	Acinetobacter_phage	24.4	6.6e-26
QBI17997.1|3267815_3268424_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QBI16760.1|3268560_3269484_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QBI16761.1|3269480_3271955_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
QBI16762.1|3272349_3272703_-	DUF1304 domain-containing protein	NA	NA	NA	NA	NA
QBI16763.1|3274681_3276061_+	serine hydrolase	NA	NA	NA	NA	NA
QBI16764.1|3276747_3277191_-	histidine biosynthesis protein HisIE	NA	NA	NA	NA	NA
QBI16765.1|3277548_3277824_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16766.1|3278206_3278602_-	glycine cleavage system protein GcvH	NA	NA	NA	NA	NA
QBI16767.1|3278738_3279848_-	glycine cleavage system aminomethyltransferase GcvT	NA	NA	NA	NA	NA
QBI16768.1|3280020_3280455_-	NfeD family protein	NA	NA	NA	NA	NA
QBI16769.1|3280458_3281424_-	SPFH/Band 7/PHB domain protein	NA	J3IZE5	Acanthamoeba_polyphaga_lentillevirus	33.5	1.5e-22
QBI16770.1|3281721_3282057_-	YnfA family protein	NA	A0A218MNG8	uncultured_virus	56.4	9.2e-25
QBI16771.1|3282053_3283073_-	nucleoside triphosphate pyrophosphohydrolase	NA	NA	NA	NA	NA
QBI16772.1|3283317_3284118_-	3'(2'),5'-bisphosphate nucleotidase	NA	NA	NA	NA	NA
QBI16773.1|3284114_3284672_-	ADP compounds hydrolase NudE	NA	NA	NA	NA	NA
QBI16774.1|3284704_3286123_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	NA	NA	NA	NA
QBI16775.1|3286113_3286848_+	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
QBI16776.1|3287149_3288166_-	ROK family protein	NA	NA	NA	NA	NA
QBI16777.1|3288866_3291575_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI16778.1|3291783_3293469_+	alpha-L-fucosidase	NA	NA	NA	NA	NA
QBI16779.1|3293472_3294540_+	glycosyl hydrolase	NA	A0A2P1CFB9	Microbacterium_phage	24.3	3.0e-08
QBI17998.1|3298117_3300091_+	glycoside hydrolase family 2 protein	NA	NA	NA	NA	NA
QBI16780.1|3300299_3302969_+	glycoside hydrolase family 3 protein	NA	NA	NA	NA	NA
QBI16781.1|3303113_3305228_-	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.5	1.4e-33
QBI17999.1|3305231_3306059_-|protease	rhomboid family intramembrane serine protease	protease	NA	NA	NA	NA
QBI18000.1|3306489_3307866_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI18001.1|3308365_3309742_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
QBI16782.1|3309857_3310181_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16783.1|3310287_3311256_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	4.3e-99
>prophage 21
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	3603368	3623395	4745660	tRNA,transposase	Ralstonia_phage(60.0%)	16	NA	NA
QBI16965.1|3603368_3604337_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.6e-98
QBI16966.1|3604431_3604623_-	hypothetical protein	NA	NA	NA	NA	NA
QBI16967.1|3604695_3605088_-	histone-like nucleoid-structuring protein	NA	NA	NA	NA	NA
QBI16968.1|3606872_3607763_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16969.1|3608230_3609199_+|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI18022.1|3609443_3610820_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI18023.1|3611084_3612188_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.5	2.9e-43
QBI16970.1|3613048_3614051_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.5	4.2e-97
QBI16971.1|3617134_3617335_+	sulfur carrier protein ThiS	NA	NA	NA	NA	NA
QBI16972.1|3617697_3618492_+	thiazole synthase	NA	NA	NA	NA	NA
QBI16973.1|3618484_3618778_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16974.1|3618793_3619552_+|tRNA	tRNA (guanosine(46)-N7)-methyltransferase TrmB	tRNA	NA	NA	NA	NA
QBI16975.1|3619627_3621490_+	SLC13 family permease	NA	NA	NA	NA	NA
QBI16976.1|3621547_3621889_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
QBI16977.1|3622147_3622423_+	hypothetical protein	NA	NA	NA	NA	NA
QBI16978.1|3622596_3623395_-|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	3711027	3771022	4745660	protease,transposase	Ralstonia_phage(25.0%)	49	NA	NA
QBI18027.1|3711027_3712404_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
QBI17037.1|3712668_3713319_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17038.1|3713691_3714981_-	citrate synthase	NA	NA	NA	NA	NA
QBI17039.1|3715215_3715458_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
QBI17040.1|3715528_3716467_-	nucleoside hydrolase	NA	NA	NA	NA	NA
QBI17041.1|3716599_3718753_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
QBI17042.1|3718773_3719154_-	RidA family protein	NA	NA	NA	NA	NA
QBI17043.1|3719233_3721405_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A2I2L310	Orpheovirus	38.8	2.8e-13
QBI17044.1|3721533_3721833_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
QBI17045.1|3722101_3722713_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	31.5	1.8e-10
QBI17046.1|3722828_3723689_-	YicC family protein	NA	NA	NA	NA	NA
QBI17047.1|3723798_3724524_+	ribonuclease PH	NA	NA	NA	NA	NA
QBI17048.1|3724885_3725509_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	C6K8R3	Cassava_brown_streak_virus	34.2	2.0e-12
QBI17049.1|3725524_3726682_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
QBI17050.1|3726848_3729269_+	DUF1631 domain-containing protein	NA	NA	NA	NA	NA
QBI17051.1|3729265_3729613_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
QBI17052.1|3729811_3731137_+	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
QBI17053.1|3732023_3733364_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
QBI17054.1|3733374_3733917_-	YecA family protein	NA	NA	NA	NA	NA
QBI17055.1|3734154_3734376_+	TIGR02449 family protein	NA	NA	NA	NA	NA
QBI17056.1|3734372_3734672_+	cell division protein ZapA	NA	NA	NA	NA	NA
QBI17057.1|3735282_3735873_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
QBI17058.1|3735869_3736340_+	EVE domain-containing protein	NA	NA	NA	NA	NA
QBI17059.1|3736431_3737079_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
QBI17060.1|3737233_3737683_+	DUF192 domain-containing protein	NA	NA	NA	NA	NA
QBI17061.1|3737832_3738714_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
QBI17062.1|3738763_3739003_-	rubredoxin	NA	NA	NA	NA	NA
QBI17063.1|3739026_3739650_+	thiamine phosphate synthase	NA	NA	NA	NA	NA
QBI17064.1|3743557_3744847_+	glutamate-1-semialdehyde-2,1-aminomutase	NA	NA	NA	NA	NA
QBI17065.1|3745119_3745356_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17066.1|3745374_3748146_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
QBI17067.1|3748224_3748674_-	azurin	NA	NA	NA	NA	NA
QBI17068.1|3750117_3750621_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17069.1|3751069_3752036_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	2.5e-99
QBI17070.1|3754616_3755234_+	hydrolase	NA	NA	NA	NA	NA
QBI17071.1|3755218_3755428_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17072.1|3755479_3756706_-	acetylornithine transaminase	NA	A0A1V0SKB7	Klosneuvirus	24.2	9.9e-16
QBI17073.1|3758875_3759673_+|transposase	IS5 family transposase	transposase	NA	NA	NA	NA
QBI17074.1|3759720_3760380_-	serine/threonine protein kinase	NA	NA	NA	NA	NA
QBI17075.1|3760531_3762619_+	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
QBI17076.1|3762732_3763002_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17077.1|3763341_3764226_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17078.1|3764372_3764969_-|protease	ATP-dependent protease	protease	NA	NA	NA	NA
QBI17079.1|3764968_3766327_-	UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase	NA	NA	NA	NA	NA
QBI17080.1|3766691_3767255_-	adenylate kinase	NA	A0A1B4XWI3	Tenacibaculum_phage	31.4	2.1e-13
QBI17081.1|3767414_3768671_+	6-phosphofructokinase	NA	NA	NA	NA	NA
QBI17082.1|3768589_3768967_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17083.1|3768969_3769938_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	59.7	1.6e-98
QBI17084.1|3770059_3771022_-|transposase	IS1595 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	3809192	3846294	4745660	protease,transposase	Ralstonia_phage(28.57%)	31	NA	NA
QBI17109.1|3809192_3810161_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.7	5.1e-100
QBI17110.1|3810163_3810442_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17111.1|3811273_3811612_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17112.1|3811608_3812634_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.2	7.3e-73
QBI17113.1|3812668_3812815_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17114.1|3812815_3813256_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBI17115.1|3814069_3815335_-	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI18031.1|3815882_3817259_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.0	6.0e-62
QBI17116.1|3818248_3818452_+	hypothetical protein	NA	NA	NA	NA	NA
QBI18032.1|3818441_3818804_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBI17117.1|3819534_3820503_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI17118.1|3821853_3822018_+	alpha-mannosidase	NA	NA	NA	NA	NA
QBI17119.1|3822193_3824503_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
QBI17120.1|3824700_3826074_-	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
QBI17121.1|3826368_3827541_+	porin	NA	NA	NA	NA	NA
QBI17122.1|3827862_3830508_+	response regulator	NA	B5LWN0	Feldmannia_species_virus	27.7	5.8e-13
QBI17123.1|3832168_3832948_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBI17124.1|3832939_3833842_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI17125.1|3833854_3834061_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17126.1|3834152_3834758_+	aldo/keto reductase	NA	NA	NA	NA	NA
QBI17127.1|3835474_3835861_+	hypothetical protein	NA	NA	NA	NA	NA
QBI18033.1|3835829_3836468_-	response regulator transcription factor	NA	NA	NA	NA	NA
QBI17128.1|3837556_3838942_-	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	23.7	2.4e-10
QBI17129.1|3838934_3839636_-	response regulator transcription factor	NA	NA	NA	NA	NA
QBI17130.1|3839891_3841085_+	porin	NA	NA	NA	NA	NA
QBI17131.1|3841084_3841318_+	magnesium transporter	NA	NA	NA	NA	NA
QBI17132.1|3841311_3842640_+	TRAP transporter large permease subunit	NA	NA	NA	NA	NA
QBI17133.1|3842754_3843495_+	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
QBI17134.1|3843515_3843713_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17135.1|3843754_3844786_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
QBI18034.1|3844917_3846294_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.7	3.2e-63
>prophage 25
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	3959675	3966045	4745660		Enterobacteria_phage(50.0%)	6	NA	NA
QBI17209.1|3959675_3961022_+	phosphomannomutase/phosphoglucomutase	NA	A0A127AWJ1	Bacillus_phage	26.9	2.6e-33
QBI17210.1|3961067_3962471_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	28.8	1.6e-41
QBI17211.1|3962587_3963496_-	dTDP-4-dehydrorhamnose reductase	NA	A0A1D7XFA3	Escherichia_phage	33.8	5.4e-27
QBI17212.1|3963492_3964050_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	48.1	1.7e-44
QBI18044.1|3964046_3964934_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	58.2	2.2e-94
QBI17213.1|3964989_3966045_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	48.0	4.3e-84
>prophage 26
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	4472180	4619829	4745660	tRNA,transposase	Leptospira_phage(14.29%)	92	NA	NA
QBI17581.1|4472180_4473302_-|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.5	3.9e-43
QBI18083.1|4473320_4474307_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.0e-99
QBI17582.1|4475737_4476706_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	2.5e-99
QBI17583.1|4476969_4480827_-	translocation/assembly module TamB	NA	NA	NA	NA	NA
QBI17584.1|4480823_4482605_-	outer membrane protein assembly factor	NA	NA	NA	NA	NA
QBI17585.1|4485789_4487379_-	sulfotransferase family protein	NA	NA	NA	NA	NA
QBI17586.1|4487378_4489637_-|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
QBI17587.1|4489625_4489910_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17588.1|4489794_4490703_-|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
QBI17589.1|4490792_4492607_+	type II/IV secretion system protein	NA	NA	NA	NA	NA
QBI18084.1|4493000_4501634_-	hypothetical protein	NA	A0A1S5SDF1	Streptococcus_phage	32.0	1.4e-10
QBI17590.1|4503222_4504122_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17591.1|4504274_4505030_-	twin-arginine translocase subunit TatC	NA	NA	NA	NA	NA
QBI17592.1|4505026_4505599_-	twin-arginine translocase subunit TatB	NA	NA	NA	NA	NA
QBI17593.1|4505614_4505842_-	Sec-independent protein translocase subunit TatA	NA	NA	NA	NA	NA
QBI17594.1|4505914_4506820_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17595.1|4506973_4507939_+	ferrochelatase	NA	NA	NA	NA	NA
QBI18085.1|4507941_4508793_+	alpha/beta hydrolase	NA	R4JP33	Mycobacterium_phage	31.3	1.3e-06
QBI17596.1|4508873_4509332_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17597.1|4509602_4510388_-	M48 family peptidase	NA	NA	NA	NA	NA
QBI17598.1|4510363_4510609_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17599.1|4511003_4511909_-	recombination-associated protein RdgC	NA	S4TWL4	Salmonella_phage	33.2	1.4e-43
QBI17600.1|4511972_4512890_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	62.5	3.1e-83
QBI17601.1|4512980_4513520_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17602.1|4513523_4514861_+	xylose isomerase	NA	NA	NA	NA	NA
QBI17603.1|4514985_4516017_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
QBI17604.1|4516175_4517243_-	LacI family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QBI17605.1|4517418_4519614_+	alpha-glucuronidase	NA	NA	NA	NA	NA
QBI17606.1|4521585_4522845_+	D-galactonate dehydratase family protein	NA	Q6A202	Oenococcus_phage	25.8	1.7e-39
QBI17607.1|4522844_4524545_+	glycoside hydrolase family 43 protein	NA	NA	NA	NA	NA
QBI17608.1|4524547_4527262_+	glycoside hydrolase family 3 protein	NA	NA	NA	NA	NA
QBI17609.1|4527470_4528991_+	mannitol dehydrogenase family protein	NA	G8DCZ3	Micromonas_pusilla_virus	31.4	3.3e-45
QBI17610.1|4528985_4530017_-|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
QBI18086.1|4530199_4531576_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI17611.1|4531752_4532856_+	restriction endonuclease	NA	A0A1S5SAB0	Streptococcus_phage	40.4	9.4e-58
QBI17612.1|4532947_4533322_-	VOC family protein	NA	NA	NA	NA	NA
QBI17613.1|4534022_4535039_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.6	1.9e-49
QBI17614.1|4535661_4536717_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17615.1|4536943_4538362_-	glucuronate isomerase	NA	NA	NA	NA	NA
QBI17616.1|4538402_4539380_-	endo-1,4-beta-xylanase	NA	NA	NA	NA	NA
QBI17617.1|4540784_4542266_-	MFS transporter	NA	NA	NA	NA	NA
QBI17618.1|4542607_4545481_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI17619.1|4545579_4547067_+	MFS transporter	NA	NA	NA	NA	NA
QBI17620.1|4547098_4548133_+	alpha-N-arabinofuranosidase	NA	NA	NA	NA	NA
QBI17621.1|4549288_4550257_-|transposase	IS5-like element ISXo1 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
QBI18087.1|4550723_4551528_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	36.0	7.7e-09
QBI17622.1|4551729_4552302_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17623.1|4552440_4552659_+	DUF465 domain-containing protein	NA	NA	NA	NA	NA
QBI17624.1|4553295_4554276_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
QBI17625.1|4554471_4557135_-	glycerol-3-phosphate 1-O-acyltransferase PlsB	NA	NA	NA	NA	NA
QBI17626.1|4557134_4558109_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17627.1|4558107_4558353_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17628.1|4558521_4559574_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
QBI17629.1|4559738_4562777_+	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI17630.1|4563078_4566111_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17631.1|4566220_4567750_+	tryptophan 7-halogenase	NA	M4T1E3	Cyanophage	28.5	3.9e-46
QBI17632.1|4568056_4568836_-	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
QBI17633.1|4568832_4569843_-	5'-nucleotidase, lipoprotein e(P4) family	NA	NA	NA	NA	NA
QBI17634.1|4570122_4570788_+	DUF480 domain-containing protein	NA	NA	NA	NA	NA
QBI17635.1|4572174_4574151_-	DNA helicase Rep	NA	A7KV33	Bacillus_phage	37.0	3.1e-112
QBI17636.1|4574357_4574987_+	thymidine kinase	NA	A0A023W530	Serratia_phage	55.0	1.1e-52
QBI17637.1|4575445_4576684_+	GAF domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
QBI17638.1|4576826_4578425_-	glucan biosynthesis protein D	NA	NA	NA	NA	NA
QBI17639.1|4578493_4579585_-	DUF4380 domain-containing protein	NA	NA	NA	NA	NA
QBI17640.1|4579817_4580633_-	bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA	A0A127AWE5	Bacillus_phage	27.0	1.1e-18
QBI18088.1|4580921_4582298_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	47.3	2.1e-62
QBI17641.1|4588775_4590680_-	GAF domain-containing protein	NA	Q6XLU9	Feldmannia_irregularis_virus	27.7	3.0e-19
QBI17642.1|4590676_4591279_-	biliverdin-producing heme oxygenase	NA	NA	NA	NA	NA
QBI17643.1|4591379_4592639_-	tetracycline resistance MFS efflux pump	NA	NA	NA	NA	NA
QBI17644.1|4592929_4595092_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
QBI17645.1|4595244_4595451_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17646.1|4595658_4596048_-	hypothetical protein	NA	NA	NA	NA	NA
QBI18089.1|4596154_4596976_+	sulfite exporter TauE/SafE family protein	NA	NA	NA	NA	NA
QBI18090.1|4597100_4598477_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	6.6e-61
QBI17647.1|4598608_4599790_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17648.1|4599887_4603319_-	ATP-binding protein	NA	NA	NA	NA	NA
QBI17649.1|4603466_4604165_-	DUF4194 domain-containing protein	NA	NA	NA	NA	NA
QBI17650.1|4604148_4605621_-	DUF3375 domain-containing protein	NA	NA	NA	NA	NA
QBI17651.1|4605617_4606205_-	DUF4276 family protein	NA	NA	NA	NA	NA
QBI17652.1|4606204_4607401_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
QBI17653.1|4607474_4608104_-	GTP cyclohydrolase I FolE	NA	E7DN69	Pneumococcus_phage	49.5	4.2e-47
QBI17654.1|4608197_4608695_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QBI17655.1|4610108_4610633_+	FUSC family protein	NA	NA	NA	NA	NA
QBI17656.1|4610604_4611621_-|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	37.3	5.6e-49
QBI17657.1|4611648_4611840_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17658.1|4612027_4613389_-	MFS transporter	NA	Q6JIH2	Burkholderia_virus	27.1	5.8e-33
QBI18091.1|4613600_4614977_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	48.1	9.9e-65
QBI18092.1|4615665_4616379_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17659.1|4616409_4616916_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17660.1|4617189_4617396_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17661.1|4617382_4618495_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
QBI18093.1|4618727_4619829_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	40.6	3.2e-42
>prophage 27
CP036378	Xanthomonas oryzae pv. oryzae strain CIX298 chromosome, complete genome	4745660	4633836	4682754	4745660	transposase	Ralstonia_phage(30.77%)	34	NA	NA
QBI17671.1|4633836_4634193_-|transposase	transposase	transposase	NA	NA	NA	NA
QBI17672.1|4634235_4637016_-	TonB-dependent receptor	NA	NA	NA	NA	NA
QBI17673.1|4637302_4638325_+	sugar kinase	NA	NA	NA	NA	NA
QBI18097.1|4638945_4640154_-	trans-2-enoyl-CoA reductase family protein	NA	NA	NA	NA	NA
QBI17674.1|4642125_4643292_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
QBI18098.1|4645244_4646621_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	54.8	1.0e-77
QBI17675.1|4646631_4646925_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17676.1|4647035_4649231_-	TonB-dependent receptor	NA	A0A1B0VCF0	Salmonella_phage	40.6	2.4e-65
QBI17677.1|4649329_4650532_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
QBI17678.1|4650802_4651813_+	class 1 fructose-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	37.8	7.3e-49
QBI17679.1|4652087_4652555_+	DUF4410 domain-containing protein	NA	NA	NA	NA	NA
QBI18099.1|4653931_4655308_-|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	55.1	4.6e-78
QBI17680.1|4655422_4655746_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17681.1|4655852_4656821_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	4.3e-99
QBI17682.1|4657245_4657476_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17683.1|4657639_4660285_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17684.1|4660325_4661072_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17685.1|4661093_4662389_+	HlyD family efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI18100.1|4662408_4664535_+	peptidase domain-containing ABC transporter	NA	W8CYL7	Bacillus_phage	26.3	7.9e-29
QBI18101.1|4664791_4666039_+|transposase	IS5 family transposase	transposase	K4ICS3	Acidithiobacillus_phage	46.6	2.1e-61
QBI18102.1|4667331_4667742_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
QBI17686.1|4668001_4668457_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17687.1|4668389_4668650_-	hypothetical protein	NA	NA	NA	NA	NA
QBI17688.1|4668680_4669568_-	pseudouridylate synthase	NA	NA	NA	NA	NA
QBI17689.1|4669901_4671479_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17690.1|4671973_4672801_+	restriction endonuclease	NA	NA	NA	NA	NA
QBI17691.1|4673527_4674586_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	42.9	2.6e-73
QBI17692.1|4675902_4676871_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	9.6e-99
QBI17693.1|4676873_4677077_+	hypothetical protein	NA	NA	NA	NA	NA
QBI17694.1|4677111_4678143_+|transposase	IS630 family transposase	transposase	S5VXX4	Leptospira_phage	43.5	6.0e-75
QBI17695.1|4678589_4679558_-|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.3	4.3e-99
QBI17696.1|4679556_4680117_+	hypothetical protein	NA	NA	NA	NA	NA
QBI18103.1|4680389_4681491_+|transposase	IS3 family transposase	transposase	S5WIU1	Leptospira_phage	41.9	3.8e-43
QBI17697.1|4681785_4682754_+|transposase	IS5 family transposase	transposase	A0A077K814	Ralstonia_phage	60.0	7.3e-99
