The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	324178	393556	5451414	head,portal,tail,terminase,tRNA,integrase,capsid,protease	uncultured_Caudovirales_phage(61.11%)	74	359937:359954	375932:375949
QBI05705.1|324178_324673_-|protease	ClpXP protease specificity-enhancing factor	protease	A0A1S5R3H3	Pseudomonas_phage	54.8	1.5e-26
QBI05706.1|324676_325315_-	stringent starvation protein A	NA	NA	NA	NA	NA
QBI10372.1|325313_325517_+	hypothetical protein	NA	NA	NA	NA	NA
QBI05707.1|325626_326019_-	30S ribosomal protein S9	NA	NA	NA	NA	NA
QBI05708.1|326034_326463_-	50S ribosomal protein L13	NA	NA	NA	NA	NA
QBI05709.1|326728_327856_-	cell division protein ZapE	NA	NA	NA	NA	NA
QBI05710.1|328046_328445_+	DUF1043 family protein	NA	NA	NA	NA	NA
QBI05711.1|328618_329986_+|protease	serine endoprotease DegQ	protease	A0A1B1IT49	uncultured_Mediterranean_phage	25.3	6.0e-22
QBI05712.1|330073_331132_+|protease	serine endoprotease DegS	protease	NA	NA	NA	NA
QBI05713.1|331268_332207_-	malate dehydrogenase	NA	NA	NA	NA	NA
QBI05714.1|332621_333092_+	transcriptional regulator ArgR	NA	NA	NA	NA	NA
QBI05715.1|333467_333731_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA	NA
QBI05716.1|333829_334096_+	peroxide/acid stress response protein YhcN	NA	NA	NA	NA	NA
QBI05717.1|334146_334422_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05718.1|334501_336469_-	p-hydroxybenzoic acid efflux pump subunit AaeB	NA	NA	NA	NA	NA
QBI05719.1|336474_337407_-	p-hydroxybenzoic acid efflux pump subunit AaeA	NA	NA	NA	NA	NA
QBI05720.1|337414_337618_-	DUF1656 domain-containing protein	NA	NA	NA	NA	NA
QBI05721.1|337749_338679_+	HTH-type transcriptional activator AaeR	NA	NA	NA	NA	NA
QBI05722.1|338714_340160_-|protease	metalloprotease TldD	protease	NA	NA	NA	NA
QBI05723.1|340248_344046_-	AsmA2 domain-containing protein	NA	NA	NA	NA	NA
QBI05724.1|344083_345553_-	ribonuclease G	NA	NA	NA	NA	NA
QBI05725.1|345555_346137_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
QBI05726.1|346144_346633_-	rod shape-determining protein MreD	NA	NA	NA	NA	NA
QBI05727.1|346632_347625_-	rod shape-determining protein MreC	NA	NA	NA	NA	NA
QBI05728.1|347695_348739_-	rod shape-determining protein	NA	F2Y0P3	Organic_Lake_phycodnavirus	22.3	6.7e-05
QBI05729.1|349044_350985_-	RNase E specificity factor CsrD	NA	NA	NA	NA	NA
QBI05730.1|351064_351256_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05731.1|351484_352486_+	protein-methionine-sulfoxide reductase catalytic subunit MsrP	NA	NA	NA	NA	NA
QBI05732.1|352485_353094_+	protein-methionine-sulfoxide reductase heme-binding subunit MsrQ	NA	NA	NA	NA	NA
QBI05733.1|353317_353770_+	type II 3-dehydroquinate dehydratase	NA	NA	NA	NA	NA
QBI05734.1|353792_354260_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
QBI05735.1|354270_355620_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
QBI05736.1|355730_355973_+	DUF997 family protein	NA	NA	NA	NA	NA
QBI10373.1|355962_357414_+	sodium/pantothenate symporter	NA	NA	NA	NA	NA
QBI05737.1|357425_358307_+	50S ribosomal protein L11 methyltransferase	NA	NA	NA	NA	NA
QBI05738.1|358279_358507_+	hypothetical protein	NA	NA	NA	NA	NA
QBI05739.1|358664_359630_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
QBI05740.1|359654_359951_+	DNA-binding transcriptional regulator Fis	NA	NA	NA	NA	NA
359937:359954	attL	TACGGCATGAACTGATAC	NA	NA	NA	NA
QBI05741.1|360104_360296_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05742.1|360298_361960_-|terminase	terminase large subunit	terminase	A0A2H4JB64	uncultured_Caudovirales_phage	98.0	0.0e+00
QBI05743.1|361943_362300_-|terminase	phage terminase small subunit P27 family	terminase	A0A2H4JHS3	uncultured_Caudovirales_phage	99.2	5.5e-60
QBI05744.1|362257_362449_-|terminase	terminase	terminase	NA	NA	NA	NA
QBI05745.1|362575_363019_-	HNH endonuclease	NA	A0A2H4JAS8	uncultured_Caudovirales_phage	91.8	2.8e-77
QBI05746.1|363018_363318_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A2H4JD08	uncultured_Caudovirales_phage	80.8	3.4e-39
QBI05747.1|363314_363650_-|head,tail	head-tail adaptor	head,tail	A0A2H4JHK5	uncultured_Caudovirales_phage	57.8	3.7e-26
QBI05748.1|363646_364888_-|portal	phage portal protein	portal	A0A2H4JFJ9	uncultured_Caudovirales_phage	96.5	1.0e-230
QBI05749.1|364889_365450_-|head,protease	HK97 family phage prohead protease	head,protease	A0A2H4JB68	uncultured_Caudovirales_phage	95.7	1.2e-98
QBI05750.1|365501_366668_-|capsid	phage major capsid protein	capsid	A0A2H4JED2	uncultured_Caudovirales_phage	95.9	9.8e-207
QBI05751.1|366931_367444_+	hypothetical protein	NA	NA	NA	NA	NA
QBI05752.1|367492_367828_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05753.1|368170_370306_-	DUF927 domain-containing protein	NA	A0A1W6JPG0	Morganella_phage	62.4	3.4e-205
QBI05754.1|370305_370671_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05755.1|370667_371036_-	hypothetical protein	NA	A0A2H4JCX7	uncultured_Caudovirales_phage	81.1	3.7e-51
QBI05756.1|371032_371347_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05757.1|371339_371528_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10374.1|371520_371790_-	host cell division inhibitor Icd-like protein	NA	A0A2H4JGW3	uncultured_Caudovirales_phage	94.4	2.4e-44
QBI10375.1|371923_372118_+	toxin-antitoxin system HicB family antitoxin	NA	NA	NA	NA	NA
QBI05758.1|372241_373021_-	hypothetical protein	NA	Q8HA02	Enterobacteria_phage	51.5	6.2e-40
QBI05759.1|373031_373316_-	AlpA family phage regulatory protein	NA	NA	NA	NA	NA
QBI05760.1|373497_374439_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05761.1|374531_375758_-|integrase	site-specific integrase	integrase	A0A2H4JB45	uncultured_Caudovirales_phage	62.2	1.8e-150
QBI05762.1|376033_376684_-	acrEF/envCD operon transcriptional regulator	NA	NA	NA	NA	NA
375932:375949	attR	TACGGCATGAACTGATAC	NA	NA	NA	NA
QBI05763.1|377062_378202_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QBI05764.1|378214_381325_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QBI05765.1|381618_381840_+	hypothetical protein	NA	NA	NA	NA	NA
QBI05766.1|387635_388190_+	gamma carbonic anhydrase family protein	NA	NA	NA	NA	NA
QBI05767.1|388165_388423_-	DUF1488 domain-containing protein	NA	NA	NA	NA	NA
QBI05768.1|388419_389238_-	shikimate dehydrogenase	NA	NA	NA	NA	NA
QBI05769.1|389241_389814_-	L-threonylcarbamoyladenylate synthase type 1 TsaC	NA	NA	NA	NA	NA
QBI05770.1|389818_390361_-	hypothetical protein	NA	NA	NA	NA	NA
QBI05771.1|390386_390860_-	DUF494 domain-containing protein	NA	NA	NA	NA	NA
QBI05772.1|390831_391956_-	DNA-protecting protein DprA	NA	NA	NA	NA	NA
QBI05773.1|392084_392594_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	40.3	2.6e-18
QBI05774.1|392608_393556_+|tRNA	methionyl-tRNA formyltransferase	tRNA	E3SNR5	Prochlorococcus_phage	37.2	2.2e-07
>prophage 2
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	1471265	1478891	5451414	transposase	Enterobacteria_phage(83.33%)	8	NA	NA
QBI06741.1|1471265_1472246_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
QBI06742.1|1473066_1473633_-	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
QBI06743.1|1473650_1473896_-	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
QBI06744.1|1473892_1474630_-	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.1e-70
QBI06745.1|1475453_1476002_+	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	69.4	1.1e-30
QBI06746.1|1475998_1476226_+	hypothetical protein	NA	NA	NA	NA	NA
QBI06747.1|1476222_1476543_+	hypothetical protein	NA	NA	NA	NA	NA
QBI06748.1|1476557_1478891_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	83.9	0.0e+00
>prophage 3
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	1949535	1961188	5451414		Enterobacteria_phage(70.0%)	13	NA	NA
QBI07148.1|1949535_1951869_-	DNA primase	NA	Q7M2A8	Enterobacteria_phage	82.2	0.0e+00
QBI07149.1|1951880_1952201_-	hypothetical protein	NA	NA	NA	NA	NA
QBI07150.1|1952197_1952425_-	hypothetical protein	NA	NA	NA	NA	NA
QBI07151.1|1952421_1952979_-	host cell division inhibitor Icd-like protein	NA	Q7M2A7	Enterobacteria_phage	70.4	1.8e-33
QBI07152.1|1952975_1953242_-	AlpA family transcriptional regulator	NA	Q7M299	Enterobacteria_phage	71.6	2.6e-30
QBI07153.1|1953783_1954521_+	glycoprotein 3	NA	Q7M2A2	Enterobacteria_phage	59.4	1.9e-70
QBI07154.1|1954517_1954763_+	hypothetical protein	NA	Q7M294	Enterobacteria_phage	56.8	5.5e-19
QBI07155.1|1954780_1955347_+	Polarity suppression protein	NA	Q7M2A1	Enterobacteria_phage	63.8	9.7e-59
QBI07156.1|1955914_1956340_-	hypothetical protein	NA	NA	NA	NA	NA
QBI07157.1|1956339_1957290_-	cobyrinic acid a,c-diamide synthase	NA	A0A1X9IGI7	Lactococcus_phage	27.1	1.2e-13
QBI07158.1|1957277_1958468_-	DUF4102 domain-containing protein	NA	Q7M297	Enterobacteria_phage	62.7	6.4e-145
QBI07159.1|1958820_1960074_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	44.9	8.9e-89
QBI07160.1|1960084_1961188_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	40.5	4.8e-62
>prophage 4
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	2604886	2642221	5451414	head,portal,tail,terminase,plate,integrase,capsid,lysis	Salmonella_phage(86.84%)	46	2601125:2601140	2638314:2638329
2601125:2601140	attL	GCGACGCTGCTGGCGC	NA	NA	NA	NA
QBI07732.1|2604886_2605939_-|integrase	site-specific integrase	integrase	A0A218M4I3	Erwinia_phage	57.0	1.0e-106
QBI07733.1|2606106_2606358_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10475.1|2606357_2607842_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI07734.1|2607940_2608885_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10476.1|2608896_2609775_-	Repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	39.9	1.7e-30
QBI07735.1|2609920_2610142_+	regulator	NA	NA	NA	NA	NA
QBI07736.1|2610174_2610684_+	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.8	5.8e-87
QBI07737.1|2610691_2610892_+	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	97.0	1.6e-32
QBI07738.1|2610855_2611197_+	hypothetical protein	NA	E5G6L5	Salmonella_phage	99.1	4.6e-56
QBI07739.1|2611264_2611498_+	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	96.1	4.1e-32
QBI07740.1|2611497_2611725_+	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	6.0e-36
QBI07741.1|2611721_2612579_+	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	95.4	2.0e-156
QBI07742.1|2612575_2614990_+	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.5	0.0e+00
QBI10477.1|2615143_2615332_+	hypothetical protein	NA	E5G6M0	Salmonella_phage	98.4	5.5e-27
QBI07743.1|2615270_2615576_+	DinI family protein	NA	E5G6M1	Salmonella_phage	100.0	4.7e-36
QBI07744.1|2615690_2616368_+	hypothetical protein	NA	NA	NA	NA	NA
QBI07745.1|2616643_2618386_+	hypothetical protein	NA	NA	NA	NA	NA
QBI07746.1|2618447_2619473_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	86.7	7.6e-171
QBI07747.1|2619472_2621239_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	99.0	0.0e+00
QBI07748.1|2621381_2622215_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	88.8	6.3e-123
QBI07749.1|2622231_2623290_+|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	1.1e-180
QBI07750.1|2623293_2623944_+	hypothetical protein	NA	E5G6M7	Salmonella_phage	96.3	8.7e-112
QBI07751.1|2624039_2624504_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	8.4e-77
QBI07752.1|2624503_2624707_+|tail	phage tail protein	tail	A0A1S6KZY4	Salmonella_phage	88.1	1.3e-29
QBI07753.1|2624710_2624926_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	90.1	3.6e-30
QBI07754.1|2624906_2625416_+	lysozyme	NA	E5G6N1	Salmonella_phage	83.4	2.1e-81
QBI07755.1|2625420_2625804_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	42.0	2.1e-17
QBI07756.1|2625800_2626229_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	77.9	9.6e-51
QBI07757.1|2626324_2626756_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	82.5	9.9e-64
QBI07758.1|2626748_2627195_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	71.2	2.2e-50
QBI07759.1|2627191_2627884_-	hypothetical protein	NA	NA	NA	NA	NA
QBI07760.1|2627978_2628551_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	72.3	4.7e-77
QBI07761.1|2628547_2628910_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	83.9	4.9e-48
QBI07762.1|2628896_2629805_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	66.9	7.6e-106
QBI07763.1|2629797_2630397_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	60.5	1.3e-58
QBI07764.1|2630398_2633350_+	hypothetical protein	NA	A0A2H4N7A3	Pectobacterium_phage	50.9	1.2e-06
QBI07765.1|2633353_2634085_+	hypothetical protein	NA	NA	NA	NA	NA
QBI07766.1|2634081_2634285_+	hypothetical protein	NA	NA	NA	NA	NA
QBI07767.1|2635528_2636701_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	93.3	1.9e-210
QBI07768.1|2636710_2637226_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	85.4	1.3e-81
QBI07769.1|2637278_2637578_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	79.0	3.7e-33
QBI07770.1|2637592_2637712_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
QBI07771.1|2637704_2640332_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	42.0	5.6e-117
2638314:2638329	attR	GCGACGCTGCTGGCGC	NA	NA	NA	NA
QBI07772.1|2640328_2640814_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	75.6	7.2e-63
QBI07773.1|2640810_2641911_+	phage late control D family protein	NA	A0A1S6KZZ5	Salmonella_phage	87.4	4.9e-176
QBI07774.1|2642002_2642221_+	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
>prophage 5
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	2676637	2686101	5451414	tRNA,protease	Dickeya_phage(16.67%)	8	NA	NA
QBI07808.1|2676637_2677753_+	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
QBI07809.1|2677749_2679690_+	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
QBI07810.1|2679766_2679988_-	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
QBI07811.1|2680313_2680631_+|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
QBI07812.1|2680661_2682941_+|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
QBI07813.1|2683061_2683280_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
QBI07814.1|2683633_2684335_-|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
QBI07815.1|2684379_2686101_-	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	22.4	3.4e-14
>prophage 6
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	2913815	3001694	5451414	head,portal,tail,terminase,tRNA,integrase,capsid,holin	Klebsiella_phage(45.45%)	97	2910113:2910127	2968233:2968247
2910113:2910127	attL	GGTGACGCAGCAGGG	NA	NA	NA	NA
QBI08008.1|2913815_2914922_-|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
QBI08009.1|2914978_2915437_-	NUDIX hydrolase	NA	NA	NA	NA	NA
QBI08010.1|2915453_2916104_-	23S rRNA pseudouridine(2457) synthase RluE	NA	NA	NA	NA	NA
QBI08011.1|2916344_2917595_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.6	1.1e-19
QBI08012.1|2917712_2918840_-|integrase	integrase	integrase	O21925	Phage_21	58.4	4.4e-119
QBI08013.1|2918820_2919066_-	excisionase	NA	NA	NA	NA	NA
QBI08014.1|2919118_2921257_-	exonuclease	NA	S4TNL0	Salmonella_phage	42.7	5.6e-99
QBI08015.1|2921398_2921743_-	transcriptional regulator	NA	NA	NA	NA	NA
QBI08016.1|2921785_2921980_-	DUF1482 family protein	NA	NA	NA	NA	NA
QBI08017.1|2921989_2922208_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10492.1|2922370_2922685_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08018.1|2923006_2923444_-	helix-turn-helix domain-containing protein	NA	H6WRX4	Salmonella_phage	62.2	1.3e-39
QBI08019.1|2923532_2923757_+	Cro/Cl family transcriptional regulator	NA	H6WRX5	Salmonella_phage	62.5	1.3e-19
QBI08020.1|2923759_2924314_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10493.1|2924373_2925378_+	DNA-binding protein	NA	A0A0U2RT81	Escherichia_phage	40.0	1.4e-31
QBI08021.1|2925370_2925835_+	replication protein	NA	A0A0U2JGJ0	Escherichia_phage	72.2	4.1e-63
QBI08022.1|2925848_2926289_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08023.1|2926637_2928029_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10494.1|2928117_2928987_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08024.1|2929338_2930052_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08025.1|2930225_2931587_+	deoxyguanosinetriphosphate triphosphohydrolase family protein	NA	NA	NA	NA	NA
QBI08026.1|2932176_2932428_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10495.1|2932427_2933912_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI08027.1|2933990_2934224_+	DinI family protein	NA	K7PM44	Enterobacteria_phage	71.1	3.7e-25
QBI08028.1|2934235_2934526_+	hypothetical protein	NA	H6WRY6	Salmonella_phage	56.9	8.0e-17
QBI08029.1|2934566_2934959_+	DNA-binding protein	NA	K7PHB4	Enterobacterial_phage	36.6	8.0e-12
QBI08030.1|2934955_2935159_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08031.1|2935158_2936190_+	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	49.6	4.7e-96
QBI08032.1|2936206_2936809_+	hypothetical protein	NA	H9C175	Pectobacterium_phage	68.6	1.1e-76
QBI08033.1|2937052_2937256_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08034.1|2939060_2939276_+|holin	holin	holin	A5LH82	Enterobacteria_phage	88.7	2.7e-30
QBI08035.1|2939275_2939773_+	lysozyme	NA	A0A1V0E5Q7	Salmonella_phage	84.6	1.1e-77
QBI08036.1|2939769_2940120_+	hypothetical protein	NA	R9TPM9	Aeromonas_phage	38.1	7.9e-11
QBI08037.1|2941069_2941507_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08038.1|2941545_2941770_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08039.1|2942096_2942459_+	HNH endonuclease	NA	Q6UAS2	Klebsiella_phage	83.3	1.2e-57
QBI08040.1|2942410_2942734_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08041.1|2942730_2943162_+	hypothetical protein	NA	Q6UAS0	Klebsiella_phage	61.6	1.8e-41
QBI08042.1|2943410_2943845_+|terminase	phage terminase small subunit P27 family	terminase	A0A1J0GV10	Halomonas_phage	61.9	9.4e-30
QBI08043.1|2943844_2945566_+|terminase	terminase large subunit	terminase	Q7Y413	Yersinia_phage	57.4	1.5e-190
QBI08044.1|2945559_2945739_+	hypothetical protein	NA	Q6UAX9	Klebsiella_phage	57.6	3.1e-11
QBI08045.1|2945738_2946998_+|portal	phage portal protein	portal	Q6UAX8	Klebsiella_phage	89.8	1.8e-222
QBI08046.1|2947034_2947955_+	S49 family peptidase	NA	Q6UAX7	Klebsiella_phage	88.2	9.6e-149
QBI08047.1|2948032_2949319_+|capsid	phage major capsid protein	capsid	Q6UAX6	Klebsiella_phage	89.0	9.8e-216
QBI08048.1|2949377_2949638_+	hypothetical protein	NA	Q6UAX5	Klebsiella_phage	60.5	7.4e-22
QBI08049.1|2949618_2949936_+|head,tail	phage gp6-like head-tail connector protein	head,tail	Q6UAX4	Klebsiella_phage	89.8	1.5e-45
QBI08050.1|2949932_2950271_+|head,tail	head-tail adaptor protein	head,tail	Q6UAX3	Klebsiella_phage	89.3	1.4e-52
QBI08051.1|2950251_2950641_+	hypothetical protein	NA	Q6UAX2	Klebsiella_phage	86.0	9.6e-58
QBI08052.1|2950637_2951039_+	hypothetical protein	NA	Q6UAX1	Klebsiella_phage	94.0	2.3e-62
QBI08053.1|2951070_2951532_+|tail	phage tail protein	tail	Q6UAX0	Klebsiella_phage	83.7	7.8e-67
QBI08054.1|2951589_2951955_+|tail	phage tail protein	tail	Q6UAW8	Klebsiella_phage	89.3	1.6e-51
QBI10496.1|2951969_2952188_+	hypothetical protein	NA	Q6UAW9	Klebsiella_phage	90.5	5.4e-34
QBI08055.1|2952187_2955523_+|tail	phage tail tape measure protein	tail	Q6UAW7	Klebsiella_phage	88.3	0.0e+00
QBI08056.1|2955522_2955861_+|tail	phage tail protein	tail	Q6UAW6	Klebsiella_phage	88.4	1.4e-57
QBI08057.1|2955857_2956613_+|tail	phage minor tail protein L	tail	Q6UAW5	Klebsiella_phage	80.5	4.6e-125
QBI08058.1|2956614_2957325_+	peptidase P60	NA	Q6UAW4	Klebsiella_phage	90.3	1.9e-136
QBI08059.1|2957366_2957789_+	hypothetical protein	NA	J9Q806	Salmonella_phage	50.0	5.9e-29
QBI08060.1|2957815_2958409_+|tail	tail assembly protein	tail	K7PHE5	Enterobacteria_phage	76.6	8.0e-80
QBI08061.1|2958471_2971176_+	DUF1983 domain-containing protein	NA	Q6UAW1	Klebsiella_phage	47.1	0.0e+00
2968233:2968247	attR	GGTGACGCAGCAGGG	NA	NA	NA	NA
QBI08062.1|2971244_2972741_+|tail	tail fiber domain-containing protein	tail	A0A0P0IDN1	Klebsiella_phage	63.7	1.4e-125
QBI08063.1|2972895_2973048_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	92.0	3.8e-18
QBI08064.1|2973320_2974034_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QBI08065.1|2974030_2974423_-	amino acid-binding protein	NA	NA	NA	NA	NA
QBI08066.1|2974415_2974739_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
QBI08067.1|2975175_2975403_-	DUF1272 domain-containing protein	NA	NA	NA	NA	NA
QBI08068.1|2975515_2976709_-	glutathione-dependent formaldehyde dehydrogenase	NA	NA	NA	NA	NA
QBI08069.1|2977330_2977516_+	stress-induced acidophilic repeat motif-containing protein	NA	NA	NA	NA	NA
QBI08070.1|2977606_2978101_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
QBI08071.1|2978127_2978634_+	ferritin-like domain-containing protein	NA	NA	NA	NA	NA
QBI08072.1|2978650_2979538_+	manganese catalase family protein	NA	NA	NA	NA	NA
QBI08073.1|2979593_2981000_+	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
QBI08074.1|2980996_2982007_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
QBI08075.1|2982122_2982320_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08076.1|2982886_2983519_+	DNA-binding protein	NA	NA	NA	NA	NA
QBI08077.1|2983558_2983738_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08078.1|2984135_2984822_+	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI08079.1|2985132_2986641_-	UbiD family decarboxylase	NA	NA	NA	NA	NA
QBI08080.1|2986761_2987652_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI08081.1|2987658_2989443_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	36.1	5.8e-17
QBI08082.1|2989516_2990725_-	HD domain-containing protein	NA	NA	NA	NA	NA
QBI08083.1|2991027_2992071_+	type II asparaginase	NA	NA	NA	NA	NA
QBI08084.1|2992325_2992517_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08085.1|2992732_2993647_+	kdo(2)-lipid IV(A) palmitoleoyltransferase	NA	A0A1W6JP29	Morganella_phage	50.4	1.1e-72
QBI08086.1|2993736_2994375_+	leucine efflux protein LeuE	NA	NA	NA	NA	NA
QBI08087.1|2994505_2994769_+	DUF2534 family protein	NA	NA	NA	NA	NA
QBI08088.1|2994828_2994954_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10497.1|2995071_2995146_-	protein YoaJ	NA	NA	NA	NA	NA
QBI08089.1|2995145_2995247_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08090.1|2995304_2996318_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	29.0	1.4e-12
QBI08091.1|2996618_2996858_+	DUF333 domain-containing protein	NA	NA	NA	NA	NA
QBI10498.1|2996847_2997204_-	DUF488 domain-containing protein	NA	NA	NA	NA	NA
QBI08092.1|2997190_2997700_-	DUF523 domain-containing protein	NA	NA	NA	NA	NA
QBI08093.1|2997845_2998538_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08094.1|2998569_2999754_-	MFS transporter	NA	NA	NA	NA	NA
QBI10499.1|2999855_3000647_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBI08095.1|3000630_3001077_-	DUF441 domain-containing protein	NA	NA	NA	NA	NA
QBI08096.1|3001193_3001694_-|tRNA	YbaK/prolyl-tRNA synthetase associated domain-containing protein	tRNA	NA	NA	NA	NA
>prophage 7
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	3107418	3161511	5451414	integrase,holin,transposase,protease	Enterobacteria_phage(33.33%)	65	3121344:3121359	3144183:3144198
QBI08195.1|3107418_3108465_+|protease	protease SohB	protease	NA	NA	NA	NA
QBI08196.1|3108512_3108764_-	DUF2498 family protein	NA	NA	NA	NA	NA
QBI08197.1|3109170_3111768_+	type I DNA topoisomerase	NA	A0A2K9L5F8	Tupanvirus	35.6	2.9e-89
QBI08198.1|3112113_3113088_+	HTH-type transcriptional regulator CysB	NA	NA	NA	NA	NA
QBI08199.1|3113333_3113501_+	YmiA family putative membrane protein	NA	NA	NA	NA	NA
QBI08200.1|3113672_3113879_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08201.1|3113889_3116562_+	aconitate hydratase AcnA	NA	NA	NA	NA	NA
QBI08202.1|3116608_3117211_-	GTP cyclohydrolase II	NA	A0A2H4PQS2	Staphylococcus_phage	49.5	1.2e-43
QBI08203.1|3117374_3118142_+	phosphatidylglycerophosphatase B	NA	NA	NA	NA	NA
QBI08204.1|3118277_3118586_+	LapA family protein	NA	NA	NA	NA	NA
QBI08205.1|3118592_3119762_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
QBI08206.1|3119953_3120691_+	orotidine-5'-phosphate decarboxylase	NA	NA	NA	NA	NA
QBI08207.1|3120690_3121017_+	stress response translation initiation inhibitor YciH	NA	NA	NA	NA	NA
QBI08208.1|3121148_3121370_-	osmotically-inducible lipoprotein OsmB	NA	NA	NA	NA	NA
3121344:3121359	attL	CATTTTTTTGCTCGTT	NA	NA	NA	NA
QBI08209.1|3121642_3122392_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
QBI08210.1|3122463_3122643_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08211.1|3122801_3124736_-	exoribonuclease II	NA	A0A2H4UVB7	Bodo_saltans_virus	24.6	7.0e-08
QBI08212.1|3124817_3125975_-	CMD domain-containing protein	NA	NA	NA	NA	NA
QBI08213.1|3126165_3126954_-	enoyl-ACP reductase FabI	NA	NA	NA	NA	NA
QBI08214.1|3127152_3127695_-	HutD family protein	NA	NA	NA	NA	NA
QBI08215.1|3127891_3129322_+	cytosine permease	NA	NA	NA	NA	NA
QBI08216.1|3129366_3130176_-	peptide ABC transporter ATP-binding protein SapF	NA	A0A2H4PQG7	Staphylococcus_phage	28.9	2.1e-14
QBI08217.1|3130177_3131170_-	peptide ABC transporter ATP-binding protein SapD	NA	G9BWD6	Planktothrix_phage	27.2	3.0e-07
QBI08218.1|3131169_3132060_-	peptide ABC transporter permease SapC	NA	NA	NA	NA	NA
QBI08219.1|3132236_3133424_+|integrase	site-specific integrase	integrase	K7PGY1	Enterobacteria_phage	52.4	1.1e-120
QBI08220.1|3133320_3133635_-	hypothetical protein	NA	K7PM28	Enterobacteria_phage	50.8	1.6e-10
QBI08221.1|3133631_3134294_-	DNA methyltransferase	NA	G8C7S6	Escherichia_phage	84.6	2.7e-105
QBI08222.1|3134290_3134719_-	regulator	NA	M9NYX4	Enterobacteria_phage	80.3	7.5e-64
QBI08223.1|3134715_3135396_-	exonuclease	NA	A0A0M3ULE0	Salmonella_phage	91.2	8.2e-121
QBI08224.1|3135397_3135685_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08225.1|3135681_3136527_-	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	59.2	1.8e-69
QBI08226.1|3136542_3136827_-	host nuclease inhibitor GamL	NA	G8C7T1	Escherichia_phage	79.8	1.1e-39
QBI08227.1|3136915_3137110_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08228.1|3137538_3137742_+	hypothetical protein	NA	A0A192Y6Q5	Salmonella_phage	71.6	3.9e-18
QBI08229.1|3137823_3138900_-	ParA family protein	NA	H2BD62	Pseudomonas_phage	37.9	9.1e-58
QBI08230.1|3139045_3139165_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10503.1|3139187_3139886_-	helix-turn-helix transcriptional regulator	NA	Q76H56	Enterobacteria_phage	84.1	3.7e-108
QBI08231.1|3139997_3140225_+	helix-turn-helix domain-containing protein	NA	Q76H55	Enterobacteria_phage	77.1	1.4e-24
QBI08232.1|3140265_3140487_+	transcriptional regulator	NA	G8EYH8	Enterobacteria_phage	41.7	6.9e-05
QBI08233.1|3140572_3141433_+	replication protein	NA	K7PGT1	Enterobacteria_phage	53.3	1.0e-59
QBI08234.1|3141429_3142278_+	AAA family ATPase	NA	K7PLU3	Enterobacteria_phage	60.1	5.1e-88
QBI08235.1|3142274_3142577_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QBI08236.1|3142632_3142878_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08237.1|3143085_3144114_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08238.1|3144634_3145102_+	recombination protein NinB	NA	Q8VNP6	Enterobacteria_phage	45.8	3.4e-33
3144183:3144198	attR	AACGAGCAAAAAAATG	NA	NA	NA	NA
QBI08239.1|3145082_3145250_+	NinE family protein	NA	K7P7K0	Enterobacteria_phage	62.5	4.6e-09
QBI08240.1|3145246_3145915_+	serine/threonine protein phosphatase	NA	K7P6H8	Enterobacteria_phage	78.7	1.4e-104
QBI08241.1|3145907_3146546_+	hypothetical protein	NA	H6WRY9	Salmonella_phage	69.8	3.2e-74
QBI08242.1|3146542_3146683_+	YlcG family protein	NA	NA	NA	NA	NA
QBI10504.1|3146682_3147372_+	antiterminator	NA	I6PDF8	Cronobacter_phage	53.1	2.1e-55
QBI08243.1|3147597_3148644_+|transposase	IS481-like element ISKpn28 family transposase	transposase	A0A0M3LR35	Mannheimia_phage	21.9	1.3e-05
QBI10505.1|3149122_3149422_+|holin	holin	holin	A0A286N2Q5	Klebsiella_phage	100.0	4.5e-47
QBI08244.1|3149418_3149958_+	hypothetical protein	NA	A0A286N2Q6	Klebsiella_phage	98.9	3.3e-101
QBI08245.1|3149954_3150242_+	hypothetical protein	NA	A0A286N2Q7	Klebsiella_phage	95.4	4.4e-36
QBI08246.1|3150278_3150983_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10506.1|3151964_3152756_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA2	NA	NA	NA	NA	NA
QBI08247.1|3152919_3153267_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
QBI08248.1|3153882_3154587_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI08249.1|3155179_3155602_+	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	3.6e-26
QBI08250.1|3156248_3156500_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10507.1|3156499_3157984_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI08251.1|3158063_3158483_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	57.5	1.4e-35
QBI08252.1|3158484_3159750_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	82.7	9.6e-208
QBI10508.1|3159825_3160653_-	FRG domain-containing protein	NA	A0A1S6KZX9	Salmonella_phage	30.2	8.4e-19
QBI08253.1|3160839_3161511_-	SOS response-associated peptidase	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	59.6	4.5e-79
>prophage 8
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	3194444	3267141	5451414	head,tail,terminase,transposase,plate,lysis	uncultured_Caudovirales_phage(32.08%)	88	NA	NA
QBI08283.1|3194444_3195206_+	SDR family oxidoreductase	NA	Q06VL0	Trichoplusia_ni_ascovirus	32.5	2.4e-20
QBI08284.1|3195422_3196955_+	HD domain-containing protein	NA	A0A1B1ISR1	uncultured_Mediterranean_phage	30.0	1.1e-21
QBI08285.1|3197153_3197702_-	DJ-1/PfpI family protein	NA	NA	NA	NA	NA
QBI08286.1|3197898_3199080_+	DUF4102 domain-containing protein	NA	A0A0M4QX09	Salmonella_phage	84.2	5.6e-202
QBI08287.1|3199060_3199303_-	AlpA family transcriptional regulator	NA	A0A0M4RTZ2	Salmonella_phage	73.8	2.2e-20
QBI08288.1|3199481_3199961_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08289.1|3199957_3200170_-	hypothetical protein	NA	A0A286S2B6	Klebsiella_phage	98.6	3.4e-33
QBI08290.1|3200166_3200391_-	hypothetical protein	NA	A0A286S2B3	Klebsiella_phage	89.2	3.1e-29
QBI08291.1|3200380_3201091_-	DNA-binding protein	NA	A0A286S260	Klebsiella_phage	88.3	2.1e-111
QBI10512.1|3201096_3201615_-	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	98.8	1.7e-94
QBI08292.1|3201719_3202547_-	SPFH/Band 7/PHB domain protein	NA	Q8W654	Enterobacteria_phage	84.0	5.5e-111
QBI08293.1|3202543_3202738_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08294.1|3202734_3203160_-	hypothetical protein	NA	A0A286S1S2	Klebsiella_phage	77.9	3.5e-53
QBI08295.1|3203156_3203375_-	hypothetical protein	NA	A0A286S1P6	Klebsiella_phage	98.6	6.6e-32
QBI08296.1|3203346_3203601_-	hypothetical protein	NA	A0A286SGR4	Klebsiella_phage	97.6	3.1e-41
QBI08297.1|3203593_3203959_-	hypothetical protein	NA	A0A286S1Q6	Klebsiella_phage	99.2	6.9e-58
QBI08298.1|3204128_3204317_-	hypothetical protein	NA	A0A286S1P8	Klebsiella_phage	100.0	4.6e-26
QBI08299.1|3204309_3204624_-	hypothetical protein	NA	A0A286S1T9	Klebsiella_phage	100.0	1.0e-49
QBI08300.1|3204794_3205463_-	LexA family transcriptional regulator	NA	A0A286S2B2	Klebsiella_phage	99.5	2.4e-125
QBI08301.1|3205560_3205782_+	XRE family transcriptional regulator	NA	A0A286S2C1	Klebsiella_phage	100.0	3.0e-32
QBI08302.1|3205756_3206050_+	hypothetical protein	NA	A0A286S2B5	Klebsiella_phage	97.6	2.8e-38
QBI08303.1|3206358_3208017_+	DEAD/DEAH box helicase	NA	A0A286N2P9	Klebsiella_phage	96.0	0.0e+00
QBI08304.1|3208018_3208981_+	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	99.4	4.8e-183
QBI08305.1|3208977_3209454_+	hypothetical protein	NA	A0A286N2Q1	Klebsiella_phage	100.0	1.8e-90
QBI08306.1|3209450_3210233_+	antitermination protein	NA	F1C595	Cronobacter_phage	76.8	7.2e-113
QBI08307.1|3210638_3210887_+|lysis	lysis protein	lysis	NA	NA	NA	NA
QBI08308.1|3210889_3211420_+	lysozyme	NA	K7PLY1	Enterobacteria_phage	77.1	2.7e-79
QBI08309.1|3211416_3211806_+	lipase chaperone	NA	A0A192Y6H8	Salmonella_phage	49.2	9.4e-21
QBI08310.1|3211690_3211948_+	Rz1 lytic protein	NA	S5FXQ4	Shigella_phage	70.9	2.3e-23
QBI08311.1|3212040_3212361_+	negative regulator GrlR	NA	NA	NA	NA	NA
QBI08312.1|3212462_3213215_+	hypothetical protein	NA	A0A077KBY7	Edwardsiella_phage	66.0	4.0e-12
QBI08313.1|3213165_3214566_+|terminase	PBSX family phage terminase large subunit	terminase	A0A077KAW0	Edwardsiella_phage	69.0	9.4e-188
QBI08314.1|3214803_3216255_+	DUF1073 domain-containing protein	NA	A0A0M4S6U1	Salmonella_phage	68.8	3.8e-192
QBI10513.1|3216310_3216859_+	hypothetical protein	NA	A0A0M4REK0	Salmonella_phage	56.3	3.0e-49
QBI08315.1|3216910_3218113_+	DUF2213 domain-containing protein	NA	A0A0M4R5A6	Salmonella_phage	54.1	2.6e-106
QBI08316.1|3218116_3218611_+	hypothetical protein	NA	A0A2H4JHM9	uncultured_Caudovirales_phage	62.7	4.2e-50
QBI08317.1|3218622_3219564_+	DUF2184 domain-containing protein	NA	A0A2H4J191	uncultured_Caudovirales_phage	77.1	1.7e-137
QBI08318.1|3219603_3219885_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08319.1|3219853_3220273_+	DUF4054 domain-containing protein	NA	A0A0M5M3S2	Salmonella_phage	60.7	3.3e-40
QBI08320.1|3220269_3220776_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08321.1|3220775_3221162_+|head,tail	head-tail adaptor	head,tail	A0A2H4J1A4	uncultured_Caudovirales_phage	78.2	1.1e-48
QBI10514.1|3221256_3221697_+	hypothetical protein	NA	A0A2H4J1A0	uncultured_Caudovirales_phage	51.7	1.6e-40
QBI08322.1|3221700_3222846_+	DUF3383 domain-containing protein	NA	A0A2H4J8G4	uncultured_Caudovirales_phage	76.9	6.3e-166
QBI08323.1|3222856_3223297_+	DUF3277 family protein	NA	A0A0M5M1K6	Salmonella_phage	80.1	3.3e-62
QBI08324.1|3223300_3223726_+	hypothetical protein	NA	A0A2H4J2V6	uncultured_Caudovirales_phage	63.4	2.6e-40
QBI08325.1|3223761_3223914_+	NTP pyrophosphohydrolase	NA	A0A2H4J1A2	uncultured_Caudovirales_phage	88.0	7.6e-19
QBI08326.1|3223903_3225907_+	lytic transglycosylase domain-containing protein	NA	A0A2H4J9N7	uncultured_Caudovirales_phage	63.6	1.2e-247
QBI08327.1|3225906_3226506_+	hypothetical protein	NA	A0A2H4J1B3	uncultured_Caudovirales_phage	57.6	9.9e-54
QBI08328.1|3226506_3226809_+	hypothetical protein	NA	A0A2H4J495	uncultured_Caudovirales_phage	55.2	2.0e-26
QBI08329.1|3226811_3227834_+	hypothetical protein	NA	A0A2H4J1B2	uncultured_Caudovirales_phage	54.2	9.2e-100
QBI08330.1|3227833_3228175_+	hypothetical protein	NA	A0A2H4J1A5	uncultured_Caudovirales_phage	46.6	1.8e-23
QBI08331.1|3228227_3228413_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08332.1|3228449_3229016_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08333.1|3229069_3229723_+	hypothetical protein	NA	A0A2H4J8H6	uncultured_Caudovirales_phage	63.5	1.0e-59
QBI08334.1|3229724_3230078_+	hypothetical protein	NA	A0A2H4J629	uncultured_Caudovirales_phage	80.3	2.3e-50
QBI08335.1|3230077_3231274_+	hypothetical protein	NA	A0A0M4RD32	Salmonella_phage	72.9	3.9e-158
QBI08336.1|3231270_3232044_+	DUF2612 domain-containing protein	NA	A0A2H4J1A9	uncultured_Caudovirales_phage	54.4	2.8e-77
QBI08337.1|3232043_3232910_+	hypothetical protein	NA	A0A2H4IYR0	uncultured_Caudovirales_phage	64.5	1.9e-34
QBI08338.1|3232909_3233107_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10515.1|3235457_3236186_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08339.1|3236196_3236928_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08340.1|3236924_3237134_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08341.1|3237238_3237523_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08342.1|3237745_3237994_-	DinI family protein	NA	S5MQI1	Escherichia_phage	70.4	1.4e-25
QBI08343.1|3238322_3238532_-	hypothetical protein	NA	NA	NA	NA	NA
QBI08344.1|3238589_3239570_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
QBI08345.1|3240039_3240531_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
QBI08346.1|3240573_3242118_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
QBI10516.1|3242130_3243471_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
QBI08347.1|3243467_3244157_+	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
QBI08348.1|3244153_3245860_+	OmpA family protein	NA	NA	NA	NA	NA
QBI08349.1|3245864_3246356_+	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
QBI08350.1|3246620_3249275_+	type VI secretion system ATPase TssH	NA	K4FB40	Cronobacter_phage	33.4	2.5e-96
QBI08351.1|3249267_3251646_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	33.8	9.2e-18
QBI08352.1|3251646_3252426_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
QBI08353.1|3252489_3253020_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI08354.1|3253088_3253619_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI08355.1|3253686_3254217_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI08356.1|3254285_3254816_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI08357.1|3254883_3255414_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QBI08358.1|3255401_3257819_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
QBI08359.1|3257863_3258121_+	PAAR domain-containing protein	NA	NA	NA	NA	NA
QBI08360.1|3258117_3259257_+	hypothetical protein	NA	NA	NA	NA	NA
QBI08361.1|3259240_3262666_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
QBI08362.1|3262665_3263073_+	type VI secretion protein	NA	NA	NA	NA	NA
QBI08363.1|3263124_3264258_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
QBI08364.1|3264337_3266092_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
QBI08365.1|3266055_3267141_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 9
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	3450542	3461429	5451414		Escherichia_phage(87.5%)	9	NA	NA
QBI08531.1|3450542_3451163_-	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
QBI08532.1|3451155_3452421_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	99.5	6.6e-233
QBI08533.1|3452432_3453335_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	99.3	7.7e-159
QBI08534.1|3453595_3454357_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
QBI08535.1|3454377_3455238_-	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
QBI08536.1|3455535_3455796_+	hypothetical protein	NA	A0A077SK33	Escherichia_phage	97.7	3.5e-40
QBI08537.1|3455882_3456971_+	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
QBI08538.1|3457001_3458267_-	MFS transporter	NA	NA	NA	NA	NA
QBI08539.1|3458321_3461429_-	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.6	0.0e+00
>prophage 10
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	4455888	4467563	5451414	transposase	Escherichia_phage(33.33%)	10	NA	NA
QBI09445.1|4455888_4456869_-|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
QBI09446.1|4456909_4457821_-	acyltransferase	NA	NA	NA	NA	NA
QBI09447.1|4458183_4459350_-	UDP-glucose 6-dehydrogenase	NA	M1I798	Paramecium_bursaria_Chlorella_virus	54.7	9.1e-112
QBI09448.1|4459529_4460084_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	58.2	2.9e-52
QBI09449.1|4460098_4460989_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	34.2	2.8e-28
QBI09450.1|4461020_4461890_-	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	66.7	1.7e-110
QBI09451.1|4461903_4462968_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	54.7	9.8e-105
QBI09452.1|4463122_4464493_-	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	25.9	6.4e-32
QBI09453.1|4464514_4465930_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	31.0	1.4e-53
QBI09454.1|4466156_4467563_-	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	4.7e-38
>prophage 11
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	4510908	4517813	5451414		Bacillus_phage(33.33%)	6	NA	NA
QBI09484.1|4510908_4512387_+	two-component system sensor histidine kinase BaeS	NA	W8CYF6	Bacillus_phage	28.3	1.9e-29
QBI09485.1|4512383_4513106_+	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
QBI09486.1|4513424_4514786_+	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
QBI10586.1|4515031_4515925_+	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
QBI09487.1|4516165_4516939_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.7	3.9e-26
QBI10587.1|4516949_4517813_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	7.4e-10
>prophage 12
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	4821216	4925996	5451414	head,portal,tail,terminase,transposase,plate,tRNA,coat,capsid,holin,lysis,protease	Salmonella_phage(60.87%)	110	NA	NA
QBI09752.1|4821216_4823220_-|tRNA	tRNA(Met) cytidine acetyltransferase	tRNA	NA	NA	NA	NA
QBI09753.1|4823229_4824105_-	neutral zinc metallopeptidase	NA	NA	NA	NA	NA
QBI09754.1|4824224_4824938_-	phosphoribosylaminoimidazolesuccinocarboxamide synthase	NA	A0A127KMU1	Cyanophage	35.7	1.1e-38
QBI09755.1|4825153_4826188_-	outer membrane protein assembly factor BamC	NA	NA	NA	NA	NA
QBI09756.1|4826204_4827083_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
QBI09757.1|4827170_4827803_+	glycine cleavage system transcriptional repressor	NA	NA	NA	NA	NA
QBI09758.1|4827806_4828277_+	thioredoxin-dependent thiol peroxidase	NA	NA	NA	NA	NA
QBI09759.1|4828338_4829400_-	AI-2E family transporter	NA	NA	NA	NA	NA
QBI09760.1|4829622_4831086_+|protease	beta-barrel assembly-enhancing protease	protease	NA	NA	NA	NA
QBI09761.1|4831095_4831455_+	arsenate reductase (glutaredoxin)	NA	NA	NA	NA	NA
QBI09762.1|4831582_4832494_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	58.8	3.5e-74
QBI09763.1|4832490_4833192_-	DnaA inactivator Hda	NA	NA	NA	NA	NA
QBI09764.1|4833290_4834577_-	uracil permease	NA	Q9KX94	Enterobacteria_phage	38.1	1.9e-65
QBI09765.1|4834672_4835299_-	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
QBI09766.1|4835516_4836950_-	6-phospho-beta-glucosidase	NA	NA	NA	NA	NA
QBI09767.1|4836959_4837853_-	beta-glucoside kinase	NA	NA	NA	NA	NA
QBI09768.1|4838116_4839154_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	44.5	8.2e-72
QBI09769.1|4839150_4839792_+	phosphoribosylglycinamide formyltransferase	NA	E3SNR5	Prochlorococcus_phage	41.1	1.2e-28
QBI09770.1|4839972_4842033_+	polyphosphate kinase 1	NA	NA	NA	NA	NA
QBI09771.1|4842036_4843569_+	exopolyphosphatase	NA	NA	NA	NA	NA
QBI09772.1|4843622_4845851_-	sensor domain-containing phosphodiesterase	NA	NA	NA	NA	NA
QBI09773.1|4846203_4846395_+	DUF2633 family protein	NA	G9L6F2	Escherichia_phage	79.3	3.3e-19
QBI09774.1|4846491_4847379_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBI09775.1|4847476_4848709_+	MFS transporter	NA	NA	NA	NA	NA
QBI09776.1|4849002_4850181_+	anaerobic sulfatase maturase	NA	NA	NA	NA	NA
QBI09777.1|4850164_4852033_+	phosphatase	NA	A0A2P0VMN7	Tetraselmis_virus	22.6	2.6e-07
QBI09778.1|4852219_4852720_-	DUF2514 domain-containing protein	NA	Q858E9	Salmonella_phage	76.9	1.3e-59
QBI09779.1|4852716_4853346_-	glycoside hydrolase family 19 protein	NA	Q858F0	Salmonella_phage	76.9	1.8e-90
QBI09780.1|4853335_4853641_-|holin	phage holin family protein	holin	A0A193GYK3	Enterobacter_phage	81.4	2.7e-39
QBI09781.1|4853627_4854032_-	hypothetical protein	NA	T1SA79	Salmonella_phage	81.1	8.7e-54
QBI09782.1|4854118_4855435_-	right-handed parallel beta-helix repeat-containing protein	NA	A0A0K2FI18	Enterobacter_phage	32.3	2.3e-34
QBI09783.1|4856543_4857806_+|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
QBI09784.1|4858674_4859655_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
QBI09785.1|4860074_4860902_+	hypothetical protein	NA	NA	NA	NA	NA
QBI09786.1|4860942_4861206_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09787.1|4864033_4864330_+	hypothetical protein	NA	T1SA06	Salmonella_phage	63.9	6.9e-24
QBI09788.1|4864428_4864581_+	transmembrane anchored protein	NA	G9L6D9	Escherichia_phage	83.7	2.5e-14
QBI09789.1|4864615_4864810_-	hypothetical protein	NA	Q858F7	Salmonella_phage	67.2	6.5e-15
QBI09790.1|4864806_4867563_-	hypothetical protein	NA	Q858F8	Salmonella_phage	95.4	0.0e+00
QBI09791.1|4867562_4869473_-	hypothetical protein	NA	Q858F9	Salmonella_phage	82.7	5.4e-287
QBI10598.1|4869472_4872007_-	hypothetical protein	NA	Q858G0	Salmonella_phage	84.1	0.0e+00
QBI09792.1|4872017_4872557_-	hypothetical protein	NA	A0A0F6TJ56	Escherichia_coli_O157_typing_phage	80.0	8.0e-71
QBI09793.1|4872556_4873021_-	hypothetical protein	NA	Q858G2	Salmonella_phage	81.2	1.5e-70
QBI09794.1|4873020_4875498_-	hypothetical protein	NA	Q858G3	Salmonella_phage	84.4	0.0e+00
QBI09795.1|4875497_4876103_-	hypothetical protein	NA	A0A0F6TJN5	Escherichia_coli_O157_typing_phage	77.0	4.0e-87
QBI09796.1|4876102_4876426_-	hypothetical protein	NA	G9L6C8	Escherichia_phage	85.0	5.3e-46
QBI09797.1|4876476_4876818_-	hypothetical protein	NA	G9L6C7	Escherichia_phage	70.8	2.4e-36
QBI09798.1|4876828_4877266_-	hypothetical protein	NA	A0A193GYT9	Enterobacter_phage	91.7	1.3e-66
QBI09799.1|4877319_4878306_-	hypothetical protein	NA	A0A193GZ49	Enterobacter_phage	94.2	2.5e-179
QBI09800.1|4878320_4879001_-	peptidase	NA	G9L6C4	Escherichia_phage	84.0	6.1e-76
QBI09801.1|4879003_4879300_-	hypothetical protein	NA	T1SBI9	Salmonella_phage	70.4	1.2e-33
QBI09802.1|4879296_4880979_-|tail	phage tail protein	tail	A0A0F6TJD8	Escherichia_coli_O157_typing_phage	84.4	1.5e-264
QBI09803.1|4880993_4881200_-	hypothetical protein	NA	T1SA67	Salmonella_phage	88.2	4.8e-08
QBI09804.1|4881661_4881904_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09805.1|4881953_4882325_+	hypothetical protein	NA	A0A0F6TJP2	Escherichia_coli_O157_typing_phage	91.9	3.7e-59
QBI09806.1|4882368_4883844_-|terminase	terminase	terminase	Q858H3	Salmonella_phage	93.1	6.4e-280
QBI09807.1|4883840_4884425_-|terminase	terminase small subunit	terminase	T1SBI8	Salmonella_phage	88.6	2.2e-90
QBI09808.1|4884502_4884760_-	lF-82	NA	NA	NA	NA	NA
QBI09809.1|4884912_4885164_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10599.1|4885163_4886648_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI09810.1|4886755_4886944_+	hypothetical protein	NA	A0A1S6L006	Salmonella_phage	90.3	2.2e-23
QBI09811.1|4886955_4887189_+	DinI family protein	NA	A0A0M4S6H1	Salmonella_phage	96.1	2.0e-34
QBI09812.1|4887284_4887968_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09813.1|4887954_4889034_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09814.1|4889033_4890035_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09815.1|4890556_4890826_+	hypothetical protein	NA	D2IZW1	Enterococcus_phage	41.3	1.4e-15
QBI09816.1|4890882_4891926_-|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	85.6	3.1e-172
QBI09817.1|4891925_4893689_-|terminase	terminase ATPase subunit family protein	terminase	A0A1S6KZW3	Salmonella_phage	91.8	0.0e+00
QBI09818.1|4893829_4894663_+|capsid	GPO family capsid scaffolding protein	capsid	A0A1S6KZW9	Salmonella_phage	77.6	4.4e-100
QBI09819.1|4894679_4895732_+|capsid	phage major capsid protein, P2 family	capsid	A0A1S6KZZ3	Salmonella_phage	91.0	6.8e-175
QBI09820.1|4895735_4896389_+	hypothetical protein	NA	A0A1S6KZX1	Salmonella_phage	80.0	1.9e-90
QBI09821.1|4896484_4896949_+|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	85.7	1.5e-73
QBI09822.1|4896948_4897152_+|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	89.6	9.8e-30
QBI10600.1|4897155_4897371_+	hypothetical protein	NA	E5G6N0	Salmonella_phage	88.7	6.1e-30
QBI09823.1|4897351_4897861_+	lysozyme	NA	E5G6N1	Salmonella_phage	85.2	1.6e-81
QBI09824.1|4897865_4898249_+	hypothetical protein	NA	A0A1S6KZZ2	Salmonella_phage	45.4	1.9e-18
QBI09825.1|4898245_4898674_+|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	82.5	7.1e-54
QBI09826.1|4898603_4898807_+	hypothetical protein	NA	A0A1S6KZX6	Salmonella_phage	77.6	3.0e-23
QBI09827.1|4898769_4899192_+|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	83.2	8.2e-63
QBI09828.1|4899184_4899631_+	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	72.3	2.5e-54
QBI09829.1|4899653_4900520_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09830.1|4900614_4901187_+|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	70.8	1.4e-76
QBI09831.1|4901183_4901546_+|plate	baseplate assembly protein	plate	A0A1S6KZZ4	Salmonella_phage	85.6	8.4e-48
QBI09832.1|4901532_4902441_+|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	68.9	1.9e-109
QBI09833.1|4902433_4903105_+|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	58.9	3.2e-61
QBI09834.1|4903106_4905056_+|coat	spore coat protein CotH	coat	Q6QI97	Burkholderia_phage	38.9	1.0e-06
QBI09835.1|4905065_4906184_+	hypothetical protein	NA	A0A248XD67	Klebsiella_phage	38.0	4.4e-55
QBI09836.1|4906235_4907309_+|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	53.6	6.6e-40
QBI09837.1|4907457_4908630_+|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	91.5	3.4e-207
QBI09838.1|4908639_4909155_+|tail	phage major tail tube protein	tail	E5G6P8	Salmonella_phage	84.2	1.4e-80
QBI09839.1|4909207_4909507_+|tail	phage tail assembly protein	tail	E5G6P9	Salmonella_phage	78.0	8.2e-33
QBI09840.1|4909521_4909641_+|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	87.2	2.2e-13
QBI09841.1|4909633_4912264_+|tail	phage tail tape measure protein	tail	E5FFG5	Burkholderia_phage	41.9	8.9e-115
QBI09842.1|4912260_4912746_+|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	80.1	5.2e-61
QBI09843.1|4912742_4913837_+	phage late control D family protein	NA	E5G6Q3	Salmonella_phage	83.6	2.4e-170
QBI09844.1|4913903_4914122_+	levansucrase regulator	NA	Q53ZE7	Salmonella_virus	72.2	1.9e-26
QBI09845.1|4914149_4914527_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09846.1|4915130_4915613_-	SsrA-binding protein SmpB	NA	W5RAM5	Staphylococcus_phage	47.4	2.3e-29
QBI09847.1|4915723_4916200_+	type II toxin-antitoxin system RatA family toxin	NA	NA	NA	NA	NA
QBI09848.1|4916189_4916480_+	RnfH family protein	NA	NA	NA	NA	NA
QBI09849.1|4916546_4916888_-	outer membrane protein assembly factor BamE	NA	NA	NA	NA	NA
QBI09850.1|4917035_4918697_-	DNA repair protein RecN	NA	NA	NA	NA	NA
QBI09851.1|4918783_4919662_-	NAD(+) kinase	NA	NA	NA	NA	NA
QBI09852.1|4919786_4920377_+	nucleotide exchange factor GrpE	NA	NA	NA	NA	NA
QBI09853.1|4920496_4921783_-	DUF21 domain-containing protein	NA	NA	NA	NA	NA
QBI09854.1|4921802_4922594_-	inner membrane protein YpjD	NA	NA	NA	NA	NA
QBI09855.1|4922757_4924122_+	signal recognition particle protein	NA	NA	NA	NA	NA
QBI09856.1|4924381_4924630_+	30S ribosomal protein S16	NA	NA	NA	NA	NA
QBI10601.1|4924648_4925197_+	ribosome maturation factor RimM	NA	NA	NA	NA	NA
QBI09857.1|4925228_4925996_+|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
>prophage 13
CP036365	Klebsiella pneumoniae strain WCHKP115068 chromosome, complete genome	5451414	5030712	5056767	5451414	integrase,transposase	Salmonella_phage(44.12%)	39	5024066:5024080	5064348:5064362
5024066:5024080	attL	CTGCCCGGCGTGAAG	NA	NA	NA	NA
QBI09946.1|5030712_5032179_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	38.7	1.2e-87
QBI09947.1|5032246_5033824_+	glutamine-hydrolyzing GMP synthase	NA	NA	NA	NA	NA
QBI09948.1|5034015_5035266_+	DUF4102 domain-containing protein	NA	A0A1X9TCT6	Enterobacter_phage	84.4	5.8e-205
QBI09949.1|5035208_5035451_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09950.1|5035447_5036041_-	adenine methylase	NA	T1SA14	Salmonella_phage	91.9	6.3e-109
QBI09951.1|5036037_5036700_-	hypothetical protein	NA	A0A059VF56	Pseudomonas_phage	46.6	1.2e-47
QBI09952.1|5036696_5036855_-	DUF1317 family protein	NA	T1SAR0	Salmonella_phage	78.8	1.1e-17
QBI09953.1|5036847_5037141_-	PerC family transcriptional regulator	NA	T1S9J5	Salmonella_phage	71.1	4.0e-32
QBI09954.1|5037250_5037499_-	AlpA family phage regulatory protein	NA	A0A0F6TJ45	Escherichia_coli_O157_typing_phage	76.8	4.9e-31
QBI09955.1|5037547_5038429_-	recombinase RecT	NA	T1SBJ5	Salmonella_phage	84.3	8.9e-136
QBI09956.1|5038425_5039247_-	exodeoxyribonuclease VIII	NA	A0A193GYK2	Enterobacter_phage	80.2	1.8e-130
QBI09957.1|5039243_5039543_-	hypothetical protein	NA	A0A0F6R7M4	Escherichia_coli_O157_typing_phage	54.5	2.1e-20
QBI09958.1|5039909_5040491_-	XRE family transcriptional regulator	NA	Q858D7	Salmonella_phage	64.3	7.1e-65
QBI09959.1|5040645_5040879_+	hypothetical protein	NA	T1SAR5	Salmonella_phage	66.2	9.2e-24
QBI09960.1|5041025_5041235_+	hypothetical protein	NA	A0A193GYW4	Enterobacter_phage	78.3	1.8e-26
QBI09961.1|5041234_5042002_+	primosomal protein	NA	A0A193GZ86	Enterobacter_phage	91.4	8.9e-140
QBI09962.1|5041998_5042784_+	replication protein	NA	A0A193GYX1	Enterobacter_phage	87.7	3.7e-133
QBI09963.1|5042903_5043251_+	DUF1064 domain-containing protein	NA	A0A0F6R8N5	Escherichia_coli_O157_typing_phage	82.6	6.5e-50
QBI09964.1|5043443_5043854_+	hypothetical protein	NA	A0A2P1MXC5	Escherichia_phage	45.1	4.3e-16
QBI09965.1|5043837_5044029_+	hypothetical protein	NA	NA	NA	NA	NA
QBI09966.1|5044025_5044670_+	hypothetical protein	NA	Q1MVG0	Enterobacteria_phage	79.3	8.0e-110
QBI10604.1|5044963_5045431_+	hypothetical protein	NA	A0A2R2Z312	Escherichia_phage	51.7	1.3e-37
QBI09967.1|5045430_5045724_+	hypothetical protein	NA	Q6UAT9	Klebsiella_phage	86.6	2.7e-44
QBI09968.1|5045720_5046341_+	hypothetical protein	NA	Q1MVF7	Enterobacteria_phage	40.7	1.0e-29
QBI10606.1|5046340_5046544_+	hypothetical protein	NA	NA	NA	NA	NA
QBI09969.1|5046536_5046875_+	hypothetical protein	NA	A0A193GYX4	Enterobacter_phage	80.0	1.8e-44
QBI10605.1|5046971_5048456_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI09970.1|5048455_5048707_-	hypothetical protein	NA	NA	NA	NA	NA
QBI09971.1|5048936_5051321_-	replication endonuclease	NA	A0A1S6L028	Salmonella_phage	87.9	0.0e+00
QBI09972.1|5051317_5052169_-	DNA adenine methylase	NA	A0A1S6L011	Salmonella_phage	75.4	2.2e-115
QBI09973.1|5052165_5052393_-	TraR/DksA family transcriptional regulator	NA	A0A1S6L007	Salmonella_phage	92.0	5.1e-35
QBI09974.1|5052392_5052626_-	DUF2732 family protein	NA	A0A1S6L021	Salmonella_phage	90.9	6.0e-31
QBI09975.1|5052693_5053032_-	hypothetical protein	NA	A0A218M4I7	Erwinia_phage	58.0	6.2e-29
QBI09976.1|5052995_5053196_-	DUF2724 domain-containing protein	NA	A0A1S6L005	Salmonella_phage	68.8	4.5e-19
QBI09977.1|5053203_5053713_-	phage regulatory CII family protein	NA	A0A1S6L008	Salmonella_phage	85.8	1.1e-77
QBI09978.1|5053745_5053988_-	Rha family transcriptional regulator	NA	A0A1S6KZZ6	Salmonella_phage	98.8	4.0e-38
QBI09979.1|5054110_5054740_+	phage repressor protein	NA	A0A1S6KZZ7	Salmonella_phage	54.5	1.4e-61
QBI09980.1|5054742_5055741_+|integrase	site-specific integrase	integrase	A0A1S6L016	Salmonella_phage	94.5	2.2e-183
QBI09981.1|5055786_5056767_+|transposase	IS5-like element ISKpn26 family transposase	transposase	Q38213	Escherichia_phage	99.1	8.9e-185
5064348:5064362	attR	CTGCCCGGCGTGAAG	NA	NA	NA	NA
>prophage 1
CP036368	Klebsiella pneumoniae strain WCHKP115068 plasmid p1_115068, complete sequence	59798	2020	36046	59798	integrase,transposase	Escherichia_phage(36.36%)	39	NA	NA
QBI10768.1|2020_2725_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10769.1|5368_6073_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10770.1|7183_7888_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10827.1|8105_8390_-|transposase	transposase	transposase	NA	NA	NA	NA
QBI10771.1|8358_9372_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
QBI10828.1|9663_10218_+	fluoroquinolone-acetylating aminoglycoside 6'-N-acetyltransferase AAC(6')-Ib-cr5	NA	NA	NA	NA	NA
QBI10772.1|10314_10767_+	NAD(+)--rifampin ADP-ribosyltransferase Arr-3	NA	NA	NA	NA	NA
QBI10773.1|10899_11373_+	trimethoprim-resistant dihydrofolate reductase DfrA27	NA	G3MBI7	Bacillus_virus	29.1	1.4e-15
QBI10774.1|11553_12399_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA16	NA	NA	NA	NA	NA
QBI10775.1|12515_12863_+	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
QBI10776.1|12856_13696_+	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
QBI10777.1|13625_13805_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10778.1|13823_14324_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QBI10779.1|14629_14743_-	NTP-binding protein	NA	NA	NA	NA	NA
QBI10780.1|14830_15595_+|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
QBI10781.1|15636_15849_+	resolvase	NA	NA	NA	NA	NA
QBI10782.1|15861_17070_+	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	42.5	1.2e-34
QBI10783.1|17103_18537_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.6	7.0e-106
QBI10784.1|18918_19125_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10829.1|19129_19771_-	restriction endonuclease	NA	NA	NA	NA	NA
QBI10785.1|19826_20138_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10786.1|20173_20488_-	IncN plasmid KikA protein	NA	NA	NA	NA	NA
QBI10787.1|20484_20829_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10788.1|20844_21195_-	KorB	NA	NA	NA	NA	NA
QBI10789.1|21258_21993_+	traL protein	NA	NA	NA	NA	NA
QBI10790.1|22001_22283_+	transcriptional regulator	NA	NA	NA	NA	NA
QBI10791.1|22292_22586_+	conjugal transfer protein TraM	NA	NA	NA	NA	NA
QBI10792.1|22635_22953_+	type IV secretion system protein VirB3	NA	NA	NA	NA	NA
QBI10793.1|22952_25553_+	VirB4 family type IV secretion/conjugal transfer ATPase	NA	NA	NA	NA	NA
QBI10794.1|25570_26284_+	type IV secretion system protein	NA	NA	NA	NA	NA
QBI10795.1|26291_26519_+	entry exclusion protein	NA	NA	NA	NA	NA
QBI10796.1|26534_27575_+	type IV secretion system protein	NA	NA	NA	NA	NA
QBI10797.1|27657_27804_+	conjugal transfer protein TraN	NA	NA	NA	NA	NA
QBI10798.1|27793_28492_+	type IV secretion system protein	NA	NA	NA	NA	NA
QBI10830.1|28565_29387_+	conjugal transfer protein TraO	NA	NA	NA	NA	NA
QBI10799.1|29386_30547_+	TrbI/VirB10 family protein	NA	NA	NA	NA	NA
QBI10800.1|30588_31584_+	conjugal transfer protein TraG	NA	NA	NA	NA	NA
QBI10801.1|31583_32117_+	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	33.9	5.8e-21
QBI10802.1|33040_36046_-|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.7	0.0e+00
>prophage 1
CP036366	Klebsiella pneumoniae strain WCHKP115068 plasmid pCTXM65_115068, complete sequence	82649	1796	48048	82649	protease,transposase	Escherichia_phage(36.0%)	53	NA	NA
QBI10620.1|1796_2450_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBI10621.1|2542_2800_+	antitoxin PemI	NA	NA	NA	NA	NA
QBI10622.1|2801_3134_+	mRNA interferase PemK	NA	NA	NA	NA	NA
QBI10623.1|4444_5149_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10624.1|5659_6535_+	class A extended-spectrum beta-lactamase CTX-M-65	NA	A0A1B0VBP7	Salmonella_phage	98.9	6.8e-152
QBI10625.1|6614_7538_+|transposase	IS5 family transposase	transposase	Q9MCT5	Escherichia_phage	99.7	2.2e-177
QBI10626.1|9288_9993_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10627.1|10118_10493_-	hypothetical protein	NA	A0A248SL90	Klebsiella_phage	62.7	2.2e-27
QBI10628.1|11118_11478_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10629.1|11539_11863_-	theronine dehydrogenase	NA	I3UM57	Rhodobacter_phage	38.1	6.0e-13
QBI10630.1|11859_12588_-	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
QBI10631.1|12584_13016_-	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
QBI10632.1|15138_15369_-	DUF905 domain-containing protein	NA	NA	NA	NA	NA
QBI10633.1|16346_16607_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	46.2	4.1e-12
QBI10634.1|16793_16985_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10635.1|17027_17534_-	antirestriction protein ArdA	NA	A0A1I9S7Y0	Rhodococcus_phage	31.8	4.8e-09
QBI10636.1|17938_18718_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10637.1|18771_19191_-	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
QBI10638.1|19201_19423_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10639.1|19422_20100_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	1.6e-28
QBI10640.1|20458_21130_+	DNA breaking-rejoining protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	61.7	5.1e-83
QBI10641.1|21309_21732_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	51.5	3.1e-30
QBI10642.1|21731_23003_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.0	6.1e-154
QBI10643.1|23138_24110_-	ParB/RepB/Spo0J family partition protein	NA	Q1MVJ4	Enterobacteria_phage	68.9	1.4e-113
QBI10644.1|24106_25312_-	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	89.2	1.1e-205
QBI10645.1|25674_26307_+	LacI family DNA-binding transcriptional regulator	NA	A0A1V0E035	Clostridioides_phage	31.9	2.5e-07
QBI10646.1|26360_26561_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10647.1|26707_27658_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	55.6	6.6e-76
QBI10648.1|27654_28266_-	DUF2913 family protein	NA	NA	NA	NA	NA
QBI10649.1|28262_28658_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10650.1|29171_30152_+|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.4	1.0e-185
QBI10651.1|30803_31361_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10652.1|31829_32534_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10653.1|32666_33308_-	type A-2 chloramphenicol O-acetyltransferase CatII	NA	G3CFL0	Escherichia_phage	45.9	7.3e-55
QBI10654.1|33369_34074_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10655.1|34153_34654_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10656.1|34865_35570_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10657.1|35603_36095_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10658.1|36201_36939_+	resolvase	NA	NA	NA	NA	NA
QBI10659.1|36935_37160_+	hypothetical protein	NA	NA	NA	NA	NA
QBI10660.1|37281_37458_+	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
QBI10661.1|37639_38644_-|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
QBI10662.1|38722_39157_-	Hg(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
QBI10663.1|39228_39579_+	mercuric ion transporter MerT	NA	NA	NA	NA	NA
QBI10664.1|39592_39868_+	mercury resistance system periplasmic binding protein MerP	NA	NA	NA	NA	NA
QBI10706.1|39903_40326_+	organomercurial transporter MerC	NA	NA	NA	NA	NA
QBI10665.1|40377_42072_+	mercury(II) reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	8.8e-39
QBI10666.1|42089_42452_+	mercury resistance co-regulator MerD	NA	NA	NA	NA	NA
QBI10667.1|42448_42685_+	broad-spectrum mercury transporter MerE	NA	NA	NA	NA	NA
QBI10668.1|42681_43389_+	EAL domain-containing protein	NA	NA	NA	NA	NA
QBI10669.1|44700_45405_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBI10670.1|45444_45918_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	99.3	3.3e-76
QBI10671.1|46980_48048_-|transposase	IS481-like element ISKpn28 family transposase	transposase	NA	NA	NA	NA
>prophage 1
CP036367	Klebsiella pneumoniae strain WCHKP115068 plasmid pKPC12_115068, complete sequence	55373	4344	15503	55373		Escherichia_phage(50.0%)	11	NA	NA
QBI10718.1|4344_5046_-	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.2	1.6e-26
QBI10719.1|5482_5713_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10720.1|5775_6447_-	Mediator of plasmid stability	NA	NA	NA	NA	NA
QBI10721.1|6449_7421_-	StbA family protein	NA	A0A222YXF2	Escherichia_phage	46.8	1.1e-73
QBI10760.1|7669_9154_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBI10722.1|9153_9405_-	hypothetical protein	NA	NA	NA	NA	NA
QBI10723.1|9563_9995_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	53.3	2.1e-29
QBI10724.1|9994_11266_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	63.7	7.5e-152
QBI10725.1|11347_12325_-	ParB/RepB/Spo0J family partition protein	NA	Q38420	Escherichia_phage	53.8	1.4e-86
QBI10726.1|12321_13527_-	ParA family protein	NA	A0A077SL49	Escherichia_phage	69.3	5.3e-163
QBI10727.1|14636_15503_-	RepB family plasmid replication initiator protein	NA	A0A222YYK1	Escherichia_phage	31.1	1.5e-23
