assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004319485.1_ASM431948v1	CP036255	Xanthomonas oryzae strain BB151-3 chromosome, complete genome	2	2880709-2880788	1	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	GAGAGGGTTTTTCAGGGGCGACTA	24	1	40	2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764|2880733-2880764	CP036255.1_36731-36700|CP036255.1_103231-103200|CP036255.1_605770-605801|CP036255.1_710610-710641|CP036255.1_780557-780588|CP036255.1_802325-802294|CP036255.1_953055-953086|CP036255.1_1313251-1313282|CP036255.1_1315092-1315061|CP036255.1_1488674-1488643|CP036255.1_2357664-2357633|CP036255.1_2502552-2502521|CP036255.1_2868089-2868058|CP036255.1_3057670-3057701|CP036255.1_3059540-3059571|CP036255.1_3836815-3836784|CP036255.1_4203650-4203619|CP036255.1_4251278-4251247|CP036255.1_4259234-4259265|CP036255.1_4537688-4537657|CP036255.1_4716936-4716905|CP036255.1_4795347-4795316|CP036255.1_4812674-4812705|CP036255.1_4835882-4835913|CP036255.1_4937410-4937379|CP036255.1_4964425-4964394|CP036255.1_5030579-5030548|CP036255.1_5033323-5033354|CP036255.1_5132403-5132434|CP036255.1_557763-557794|CP036255.1_590888-590919|CP036255.1_708712-708743|CP036255.1_1460735-1460704|CP036255.1_2710869-2710838|CP036255.1_3823142-3823111|CP036255.1_4748840-4748809|CP036255.1_4772529-4772498|CP036255.1_4840574-4840605|CP036255.1_4926628-4926597|CP036255.1_5015858-5015827	NA	1	1	Orphan	cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	NA|82aa|up_4|CP036255.1_2866107_2866353_-,NA|173aa|down_3|CP036255.1_2885278_2885797_-,NA|178aa|down_4|CP036255.1_2885924_2886458_-,NA|104aa|down_9|CP036255.1_2891725_2892037_+	NA|105aa|up_9|CP036255.1_2856662_2856977_+	TIGR02118, TIGR02118, conserved hypothetical protein	NA|558aa|up_8|CP036255.1_2857699_2859373_-	pfam07519, Tannase, Tannase and feruloyl esterase	NA|323aa|up_7|CP036255.1_2859912_2860881_-	PRK01212, PRK01212, homoserine kinase; Provisional	NA|836aa|up_6|CP036255.1_2860877_2863385_-	PRK09436, thrA, bifunctional aspartokinase I/homoserine dehydrogenase I; Provisional	NA|470aa|up_5|CP036255.1_2864742_2866152_+	cd00796, INT_Rci_Hp1_C, Shufflon-specific DNA recombinase Rci and Bacteriophage Hp1_like integrase, C-terminal catalytic domain	NA|82aa|up_4|CP036255.1_2866107_2866353_-	NA	NA|459aa|up_3|CP036255.1_2866537_2867914_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|459aa|up_2|CP036255.1_2868057_2869434_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|1867aa|up_1|CP036255.1_2869567_2875168_-	pfam18741, MTES_1575, REase_MTES_1575	NA|368aa|up_0|CP036255.1_2875940_2877043_+	pfam00665, rve, Integrase core domain	NA|605aa|down_0|CP036255.1_2881553_2883368_+	pfam02696, UPF0061, Uncharacterized ACR, YdiU/UPF0061 family	NA|144aa|down_1|CP036255.1_2883357_2883789_+	COG2994, HlyC, ACP:hemolysin acyltransferase (hemolysin-activating protein) [Posttranslational modification, protein turnover, chaperones]	NA|426aa|down_2|CP036255.1_2883851_2885129_+	cd17486, MFS_AmpG_like, AmpG and similar transporters of the Major Facilitator Superfamily	NA|173aa|down_3|CP036255.1_2885278_2885797_-	NA	NA|178aa|down_4|CP036255.1_2885924_2886458_-	NA	NA|245aa|down_5|CP036255.1_2886523_2887258_-	TIGR04526, predic_Ig_block, putative immunoglobulin-blocking virulence protein	NA|739aa|down_6|CP036255.1_2887362_2889579_-	COG2274, SunT, ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]	NA|433aa|down_7|CP036255.1_2889575_2890874_-	TIGR01843, Hemolysin_secretion_protein_D_plasmid, type I secretion membrane fusion protein, HlyD family	NA|114aa|down_8|CP036255.1_2891139_2891481_-	cd00093, HTH_XRE, Helix-turn-helix XRE-family like proteins	NA|104aa|down_9|CP036255.1_2891725_2892037_+	NA
GCA_004319485.1_ASM431948v1	CP036255	Xanthomonas oryzae strain BB151-3 chromosome, complete genome	3	4583175-4587152	2,2,1	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	 Type I-U?,Type I-U,Type I-C	GTCGCGTCCTCACGGGCGCGTGGATTGAAAC,GTCGCGTCCTCACGGGCGCGTGGATTGAAAC,GTCGCGTCCTCACGGGCGCGTGGATTGAAAC	31,31,31	0	0	NA	NA	I-C:I-C:I-C	60,60,60	60	TypeI-U?,TypeI-U,TypeI-C	cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	NA|76aa|up_7|CP036255.1_4574700_4574928_-,NA	NA|724aa|up_9|CP036255.1_4570540_4572712_+	TIGR03754, conj_TOL_TraD, conjugative coupling factor TraD, TOL family	NA|250aa|up_8|CP036255.1_4572708_4573458_+	TIGR03747, conj_TIGR03747, integrating conjugative element membrane protein, PFL_4697 family	NA|76aa|up_7|CP036255.1_4574700_4574928_-	NA	cas3|764aa|up_6|CP036255.1_4574910_4577202_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_5|CP036255.1_4577617_4578292_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|614aa|up_4|CP036255.1_4578288_4580130_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|289aa|up_3|CP036255.1_4580126_4580993_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_2|CP036255.1_4581012_4581645_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_1|CP036255.1_4581647_4582682_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_0|CP036255.1_4582696_4582987_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|323aa|down_0|CP036255.1_4587245_4588214_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|255aa|down_1|CP036255.1_4588878_4589642_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|323aa|down_2|CP036255.1_4590270_4591239_+	pfam00665, rve, Integrase core domain	NA|132aa|down_3|CP036255.1_4592223_4592619_+	TIGR01690, ICE_RAQPRD, integrative conjugative element protein, RAQPRD family	NA|80aa|down_4|CP036255.1_4592615_4592855_+	TIGR03758, conj_TIGR03758, integrating conjugative element protein, PFL_4701 family	NA|123aa|down_5|CP036255.1_4592874_4593243_+	TIGR03745, conj_TIGR03745, integrating conjugative element membrane protein, PFL_4702 family	NA|142aa|down_6|CP036255.1_4593254_4593680_+	pfam11990, DUF3487, Protein of unknown function (DUF3487)	NA|232aa|down_7|CP036255.1_4593676_4594372_+	TIGR03746, conj_TIGR03746, integrating conjugative element protein, PFL_4703 family	NA|319aa|down_8|CP036255.1_4594368_4595325_+	pfam11920, DUF3438, Protein of unknown function (DUF3438)	NA|486aa|down_9|CP036255.1_4595314_4596772_+	TIGR03752, conj_TIGR03752, integrating conjugative element protein, PFL_4705 family
GCA_004319485.1_ASM431948v1	CP036255	Xanthomonas oryzae strain BB151-3 chromosome, complete genome	4	4588347-4588838	3,3,2	PILER-CR,CRISPRCasFinder,CRT	no	cas3,cas5,cas8c,cas7,cas4,cas1,cas2	cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	 Type I-U?,Type I-U,Type I-C	GTCGCGTCCTCACGGGCGCGTGGATTGAAAC,GTCGCGTCCTCACGGGCGCGTGGATTGAAAC,GTCGCGTCCTCACGGGCGCGTGGATTGAAAC	31,31,31	0	0	NA	NA	I-C:I-C:I-C	7,7,7	7	TypeI-U?,TypeI-U,TypeI-C	cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	NA|76aa|up_8|CP036255.1_4574700_4574928_-,NA	NA|250aa|up_9|CP036255.1_4572708_4573458_+	TIGR03747, conj_TIGR03747, integrating conjugative element membrane protein, PFL_4697 family	NA|76aa|up_8|CP036255.1_4574700_4574928_-	NA	cas3|764aa|up_7|CP036255.1_4574910_4577202_+	cd17930, DEXHc_cas3, DEXH/Q-box helicase domain of Cas3	cas5|225aa|up_6|CP036255.1_4577617_4578292_+	cd09752, Cas5_I-C, CRISPR/Cas system-associated RAMP superfamily protein Cas5	cas8c|614aa|up_5|CP036255.1_4578288_4580130_+	cd09757, Cas8c_I-C, CRISPR/Cas system-associated protein Cas8c	cas7|289aa|up_4|CP036255.1_4580126_4580993_+	pfam05107, Cas_Cas7, CRISPR-associated protein Cas7	cas4|211aa|up_3|CP036255.1_4581012_4581645_+	TIGR00372, conserved_hypothetical_protein, CRISPR-associated protein Cas4	cas1|345aa|up_2|CP036255.1_4581647_4582682_+	TIGR03640, cas1_DVULG, CRISPR-associated endonuclease Cas1, subtype I-C/DVULG	cas2|97aa|up_1|CP036255.1_4582696_4582987_+	cd09725, Cas2_I_II_III, CRISPR/Cas system-associated protein Cas2	NA|323aa|up_0|CP036255.1_4587245_4588214_+	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|255aa|down_0|CP036255.1_4588878_4589642_-	pfam13340, DUF4096, Putative transposase of IS4/5 family (DUF4096)	NA|323aa|down_1|CP036255.1_4590270_4591239_+	pfam00665, rve, Integrase core domain	NA|132aa|down_2|CP036255.1_4592223_4592619_+	TIGR01690, ICE_RAQPRD, integrative conjugative element protein, RAQPRD family	NA|80aa|down_3|CP036255.1_4592615_4592855_+	TIGR03758, conj_TIGR03758, integrating conjugative element protein, PFL_4701 family	NA|123aa|down_4|CP036255.1_4592874_4593243_+	TIGR03745, conj_TIGR03745, integrating conjugative element membrane protein, PFL_4702 family	NA|142aa|down_5|CP036255.1_4593254_4593680_+	pfam11990, DUF3487, Protein of unknown function (DUF3487)	NA|232aa|down_6|CP036255.1_4593676_4594372_+	TIGR03746, conj_TIGR03746, integrating conjugative element protein, PFL_4703 family	NA|319aa|down_7|CP036255.1_4594368_4595325_+	pfam11920, DUF3438, Protein of unknown function (DUF3438)	NA|486aa|down_8|CP036255.1_4595314_4596772_+	TIGR03752, conj_TIGR03752, integrating conjugative element protein, PFL_4705 family	NA|146aa|down_9|CP036255.1_4596776_4597214_+	TIGR03751, conj_TIGR03751, conjugative transfer region lipoprotein, TIGR03751 family
GCA_004319485.1_ASM431948v1	CP036255	Xanthomonas oryzae strain BB151-3 chromosome, complete genome	5	4773898-4774028	4	CRISPRCasFinder	no		cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	Orphan	GACGTAGCGTAACGAAAACTGGCAATTCCAGCACACCG	38	1	21	4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990|4773936-4773990	CP036255.1_556356-556302|CP036255.1_707305-707251|CP036255.1_2712276-2712330|CP036255.1_2877807-2877753|CP036255.1_2879272-2879218|CP036255.1_3056263-3056209|CP036255.1_3095960-3096014|CP036255.1_3838222-3838276|CP036255.1_3860664-3860718|CP036255.1_4539095-4539149|CP036255.1_4718343-4718397|CP036255.1_4958001-4957947|CP036255.1_4997456-4997510|CP036255.1_5017265-5017319|CP036255.1_289377-289431|CP036255.1_1490081-1490135|CP036255.1_3054798-3054744|CP036255.1_4750247-4750301|CP036255.1_4796754-4796808|CP036255.1_604363-604309|CP036255.1_4813116-4813170	NA	1	1	Orphan	cas3,WYL,DEDDh,csa3,DinG,cas5,cas8c,cas7,cas4,cas1,cas2	NA|65aa|up_6|CP036255.1_4763999_4764194_-,NA|79aa|up_3|CP036255.1_4768324_4768561_-,NA|95aa|up_1|CP036255.1_4771413_4771698_-,NA|76aa|down_0|CP036255.1_4774387_4774615_-,NA|112aa|down_8|CP036255.1_4789337_4789673_-	NA|403aa|up_9|CP036255.1_4760633_4761842_-	cd00610, OAT_like, Acetyl ornithine aminotransferase family	NA|348aa|up_8|CP036255.1_4761873_4762917_-	pfam13469, Sulfotransfer_3, Sulfotransferase family	NA|292aa|up_7|CP036255.1_4762909_4763785_-	pfam02668, TauD, Taurine catabolism dioxygenase TauD, TfdA family	NA|65aa|up_6|CP036255.1_4763999_4764194_-	NA	NA|409aa|up_5|CP036255.1_4764644_4765871_-	pfam13406, SLT_2, Transglycosylase SLT domain	NA|323aa|up_4|CP036255.1_4767140_4768109_-	COG3039, COG3039, Transposase and inactivated derivatives, IS5 family [DNA replication, recombination, and repair]	NA|79aa|up_3|CP036255.1_4768324_4768561_-	NA	NA|250aa|up_2|CP036255.1_4770545_4771295_+	COG3910, COG3910, Predicted ATPase [General function prediction only]	NA|95aa|up_1|CP036255.1_4771413_4771698_-	NA	NA|459aa|up_0|CP036255.1_4772497_4773874_-	pfam05598, DUF772, Transposase domain (DUF772)	NA|76aa|down_0|CP036255.1_4774387_4774615_-	NA	NA|1153aa|down_1|CP036255.1_4774623_4778082_-	TIGR03696, tRNA_nuclease_WapA, RHS repeat-associated core domain	NA|629aa|down_2|CP036255.1_4780642_4782529_-	PRK05354, PRK05354, biosynthetic arginine decarboxylase	NA|286aa|down_3|CP036255.1_4782768_4783626_+	PRK00811, PRK00811, polyamine aminopropyltransferase	NA|204aa|down_4|CP036255.1_4784064_4784676_-	pfam14470, bPH_3, Bacterial PH domain	NA|271aa|down_5|CP036255.1_4784868_4785681_-	pfam13505, OMP_b-brl, Outer membrane protein beta-barrel domain	NA|344aa|down_6|CP036255.1_4786150_4787182_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|430aa|down_7|CP036255.1_4787608_4788898_+	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|112aa|down_8|CP036255.1_4789337_4789673_-	NA	NA|144aa|down_9|CP036255.1_4789944_4790376_-	pfam06903, VirK, VirK protein
