The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	929382	1072174	5187769	head,tRNA,tail,plate,protease,capsid,holin,portal,terminase	Enterobacteria_phage(36.15%)	169	NA	NA
QBG41872.1|929382_929703_+|protease	specificity factor for ClpA-ClpP chaperone-protease complex	protease	A0A1B1IT64	uncultured_Mediterranean_phage	44.4	1.6e-13
QBG41873.1|929733_932010_+	ClpAXP	NA	A0A223W0B1	Agrobacterium_phage	42.5	1.9e-166
QBG41874.1|932694_932913_-	protein chain initiation factor IF-1	NA	NA	NA	NA	NA
QBG41875.1|933197_933902_-|tRNA	leucyl, phenylalanyl-tRNA-protein transferase	tRNA	NA	NA	NA	NA
QBG41876.1|933943_935665_-	glutathione / L-cysteine efflux transporter - CydC subunit	NA	A0A2R8FG22	Brazilian_cedratvirus	30.8	1.2e-14
QBG41877.1|935665_937432_-	glutathione / L-cysteine efflux transporter - CydD subunit	NA	W8CYL7	Bacillus_phage	24.3	4.1e-23
QBG41878.1|937554_938625_-	thioredoxin reductase monomer	NA	A0A2I2L5E1	Orpheovirus	44.6	2.1e-62
QBG41879.1|939063_939558_+	Lrp transcriptional dual regulator	NA	NA	NA	NA	NA
QBG41880.1|939692_943799_+	essential cell division protein FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
QBG41881.1|943957_944569_+	periplasmic chaperone, effects translocation of lipoproteins from inner membrane to outer	NA	NA	NA	NA	NA
QBG41882.1|944579_945923_+	recombination factor	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
QBG41883.1|946013_947306_+|tRNA	seryl-tRNA synthetase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	5.0e-95
QBG41884.1|947611_947752_-	small toxic polypeptide	NA	A0A0A7NPZ4	Enterobacteria_phage	97.8	1.5e-18
QBG41885.1|947943_948204_-	DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QBG41886.1|948244_949354_-	Phage late control gene D protein (GPD)	NA	A0A0A7NQ97	Enterobacteria_phage	94.9	1.3e-195
QBG41887.1|949511_950696_+|tail	Phage tail sheath protein	tail	A0A0A7NV69	Enterobacteria_phage	97.5	8.4e-222
QBG41888.1|950695_951208_+|tail	Phage tail tube protein FII	tail	A0A0A7NPV8	Enterobacteria_phage	97.1	1.5e-90
QBG41889.1|951263_951638_+|tail	Phage tail protein E	tail	A0A0A7NPZ0	Enterobacteria_phage	71.5	9.9e-36
QBG41890.1|951788_954596_+|tail	Phage-related minor tail protein	tail	A0A0A7NRZ9	Enterobacteria_phage	90.1	0.0e+00
QBG41891.1|954608_955097_+	Phage P2 GpU	NA	A0A0A7NV65	Enterobacteria_phage	99.4	1.4e-85
QBG41892.1|955125_955725_-	site-specific DNA recombinase	NA	A0A0A7NPV4	Enterobacteria_phage	98.9	3.8e-98
QBG41893.1|955952_956738_+	putative membrane protein	NA	Q858V4	Yersinia_virus	76.6	1.1e-108
QBG41894.1|956739_957267_+|tail	putative tail fiber assembly protein	tail	A0A0C4UR05	Shigella_phage	93.7	2.6e-90
QBG41895.1|957295_957829_-|tail	Caudovirales tail fiber assembly protein	tail	C9DGR0	Escherichia_phage	98.9	4.2e-96
QBG41896.1|957831_959817_-	putative membrane protein	NA	A0A0A7NV63	Enterobacteria_phage	86.0	3.2e-173
QBG41897.1|959819_960350_-|tail	Phage tail protein	tail	A0A0A7NPV1	Enterobacteria_phage	98.2	3.6e-92
QBG41898.1|960342_961239_-|plate	Baseplate J-like protein	plate	A0A0A7NPY5	Enterobacteria_phage	97.7	3.3e-154
QBG41899.1|961242_961593_-	Gene 25-like lysozyme	NA	A0A0A7NQ90	Enterobacteria_phage	99.1	3.5e-59
QBG41900.1|961589_962171_-|plate	Phage-related baseplate assembly protein	plate	A0A0A7NRZ3	Enterobacteria_phage	98.4	3.3e-102
QBG41901.1|962167_962812_-	Phage virion morphogenesis family protein	NA	A0A0A7NV60	Enterobacteria_phage	99.5	5.4e-114
QBG41902.1|962795_963263_-|tail	P2 phage tail completion protein R (GpR)	tail	A0A0A7NPU6	Enterobacteria_phage	95.5	3.5e-83
QBG41903.1|963286_965164_-	putative 9-O-acetyl-N-acetylneuraminate esterase	NA	H6WZJ9	Escherichia_phage	80.2	2.7e-299
QBG41904.1|965302_965698_-	hypothetical protein	NA	A0A0A7NPY2	Enterobacteria_phage	93.3	1.0e-59
QBG41905.1|965694_966087_-	hypothetical protein	NA	A0A0A7NQ86	Enterobacteria_phage	96.9	1.9e-69
QBG41906.1|966083_966407_-|holin	Phage holin family (Lysis protein S)	holin	A0A0A7NRY9	Enterobacteria_phage	93.5	1.7e-47
QBG41907.1|966409_966610_-	Phage Tail Protein X	NA	A0A0A7NV57	Enterobacteria_phage	100.0	3.5e-32
QBG41908.1|966609_967104_-|head	Phage head completion protein (GPL)	head	A0A0A7NPU2	Enterobacteria_phage	97.0	1.9e-87
QBG41909.1|967205_968006_-|terminase	Phage small terminase subunit	terminase	A0A0A7NPX9	Enterobacteria_phage	89.1	6.9e-127
QBG41910.1|968051_969104_-|capsid	Phage major capsid protein	capsid	A0A0A7NQ82	Enterobacteria_phage	94.3	1.4e-188
QBG41911.1|969127_969964_-|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	A0A0A7NRY7	Enterobacteria_phage	99.6	2.7e-150
QBG41912.1|970118_971870_+	Terminase-like family protein	NA	A0A0A7NV54	Enterobacteria_phage	97.8	0.0e+00
QBG41913.1|971869_972916_+|portal	Phage portal protein	portal	A0A0A7NPT9	Enterobacteria_phage	99.7	2.2e-202
QBG41914.1|972930_973455_-	hypothetical protein	NA	NA	NA	NA	NA
QBG41915.1|974178_974676_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41916.1|974715_975558_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41917.1|975641_975956_-	Plasmid stability protein	NA	A0A0A7NPT5	Enterobacteria_phage	52.3	4.1e-19
QBG41918.1|975960_976920_-	Plasmid segregation protein ParM	NA	A0A0A7NPX4	Enterobacteria_phage	99.1	4.2e-179
QBG41919.1|976996_979819_-	Bacteriophage replication gene A protein (GPA)	NA	A0A0A7NQ77	Enterobacteria_phage	98.4	0.0e+00
QBG41920.1|979825_980191_-	hypothetical protein	NA	A0A0A7NRY1	Enterobacteria_phage	97.5	1.7e-61
QBG41921.1|980263_980494_-	hypothetical protein	NA	A0A0A7NV48	Enterobacteria_phage	97.4	9.1e-32
QBG41922.1|980816_981116_-	hypothetical protein	NA	A0A0A7NRX6	Enterobacteria_phage	88.9	2.4e-40
QBG41923.1|981112_981379_-	hypothetical protein	NA	A0A0A7NV47	Enterobacteria_phage	75.9	2.0e-30
QBG41924.1|981375_981579_-	hypothetical protein	NA	A0A0A7NPS8	Enterobacteria_phage	83.6	2.5e-25
QBG41925.1|981602_982013_-	hypothetical protein	NA	NA	NA	NA	NA
QBG41926.1|982106_982220_-	hypothetical protein	NA	A0A0A7NPW7	Enterobacteria_phage	89.2	1.8e-09
QBG41927.1|982216_982459_-	hypothetical protein	NA	A0A0A7NQ71	Enterobacteria_phage	100.0	2.3e-38
QBG41928.1|982470_982749_-	hypothetical protein	NA	A0A0A7NRX5	Enterobacteria_phage	79.3	3.1e-34
QBG41929.1|982759_983110_-	hypothetical protein	NA	A0A0A7NV42	Enterobacteria_phage	93.1	8.1e-56
QBG41930.1|983247_983439_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41931.1|983445_983868_-	hypothetical protein	NA	NA	NA	NA	NA
QBG41932.1|983872_984394_-	Regulatory phage protein cox	NA	NA	NA	NA	NA
QBG41933.1|984498_984840_+	helix-turn-helix protein	NA	Q1JS45	Enterobacteria_phage	51.2	4.7e-16
QBG41934.1|984909_985902_+	site-specific recombinase	NA	A0A0F7LBR0	Escherichia_phage	56.2	1.3e-103
QBG41935.1|986201_988646_+	dimethyl sulfoxide reductase, chain A	NA	A0A077SK27	Escherichia_phage	49.8	6.6e-221
QBG41936.1|988656_989274_+	dimethyl sulfoxide reductase, chain B	NA	A0A077SL61	Escherichia_phage	60.6	5.0e-77
QBG41937.1|989275_990139_+	dimethyl sulfoxide reductase, chain C	NA	NA	NA	NA	NA
QBG41938.1|990174_990801_-	putative hydrolase monomer	NA	NA	NA	NA	NA
QBG41939.1|991114_992263_+	YcaD MFS transporter	NA	NA	NA	NA	NA
QBG41940.1|992359_993157_-	pyruvate formate-lyase activating enzyme	NA	A0A2P0VNQ0	Tetraselmis_virus	26.6	1.3e-21
QBG41941.1|993188_994184_-	site-specific recombinase, acts on cer sequence of ColE1, effects chromosome segregation at cell division	NA	A0A0F7LBR0	Escherichia_phage	99.4	9.3e-190
QBG41942.1|994277_994577_-	helix-turn-helix protein	NA	Q1JS29	Enterobacteria_phage	79.8	1.0e-38
QBG41943.1|994681_995038_+	Regulatory phage protein cox	NA	A0A0F7LDH4	Escherichia_phage	84.7	5.9e-54
QBG41944.1|995048_995219_+	hypothetical protein	NA	S4TNZ7	Salmonella_phage	98.2	3.9e-24
QBG41945.1|995215_995716_+	hypothetical protein	NA	A0A0F7LBQ6	Escherichia_phage	100.0	4.5e-92
QBG41946.1|995779_996004_+	hypothetical protein	NA	S4TP68	Salmonella_phage	100.0	4.7e-33
QBG41947.1|996003_996306_+	hypothetical protein	NA	A0A0F7LDT6	Escherichia_phage	99.0	2.2e-46
QBG41948.1|996305_996530_+	hypothetical protein	NA	A0A0F7LDI3	Escherichia_phage	97.3	3.2e-34
QBG41949.1|996526_996802_+	hypothetical protein	NA	U5N3W1	Enterobacteria_phage	100.0	3.8e-45
QBG41950.1|996791_999059_+	Bacteriophage replication gene A protein (GPA)	NA	A0A0F7LBQ2	Escherichia_phage	97.6	0.0e+00
QBG41951.1|999142_1000465_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41952.1|1000795_1001830_-|portal	Phage portal protein	portal	M1SV64	Escherichia_phage	99.4	4.2e-201
QBG41953.1|1001829_1003602_-	Terminase-like family protein	NA	A0A0F7LCK3	Escherichia_phage	99.8	0.0e+00
QBG41954.1|1003775_1004630_+|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	Q94MB7	Escherichia_virus	88.0	2.7e-137
QBG41955.1|1004688_1005762_+|capsid	Phage major capsid protein	capsid	Q94MH9	Enterobacteria_phage	99.2	1.1e-201
QBG41956.1|1005765_1006509_+|terminase	Phage small terminase subunit	terminase	Q858W5	Yersinia_virus	96.4	3.6e-122
QBG41957.1|1006608_1007118_+|head	Phage head completion protein (GPL)	head	U5N0S3	Enterobacteria_phage	100.0	1.1e-90
QBG41958.1|1007117_1007321_+	Phage Tail Protein X	NA	A0A0F7LCN2	Escherichia_phage	100.0	3.0e-31
QBG41959.1|1007324_1007606_+|holin	Phage holin family 2	holin	A0A0F7LA12	Escherichia_phage	100.0	1.3e-43
QBG41960.1|1007605_1008103_+	Phage lysozyme	NA	A0A0F7LBS0	Escherichia_phage	99.4	9.0e-93
QBG41961.1|1008117_1008543_+	hypothetical protein	NA	M1SV74	Escherichia_phage	95.0	2.6e-56
QBG41962.1|1008530_1008956_+	hypothetical protein	NA	Q858W0	Yersinia_virus	95.0	3.4e-64
QBG41963.1|1009063_1009531_+|tail	P2 phage tail completion protein R (GpR)	tail	A0A0F7LA33	Escherichia_phage	99.4	2.3e-82
QBG41964.1|1009523_1009976_+	Phage virion morphogenesis family protein	NA	A0A0F7LDR6	Escherichia_phage	99.3	1.8e-76
QBG41965.1|1010042_1010678_+|plate	Phage-related baseplate assembly protein	plate	A0A0F7LBP2	Escherichia_phage	97.2	7.9e-110
QBG41966.1|1010674_1011022_+	Gene 25-like lysozyme	NA	A0A0F7L9X3	Escherichia_phage	100.0	1.7e-58
QBG41967.1|1011026_1011935_+|plate	Baseplate J-like protein	plate	A0A0F7LCJ3	Escherichia_phage	99.7	2.6e-162
QBG41968.1|1012031_1012457_+|tail	Phage tail protein	tail	Q858V5	Yersinia_virus	97.1	9.1e-78
QBG41969.1|1012467_1015086_+|tail	putative side tail fiber assembly protein	tail	Q858V4	Yersinia_virus	73.5	1.6e-286
QBG41970.1|1015085_1015664_+|tail	putative tail fiber assembly protein	tail	K7PMH7	Enterobacteria_phage	65.4	6.8e-68
QBG41971.1|1016694_1017939_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41972.1|1017939_1018797_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41973.1|1018885_1019029_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41974.1|1019371_1020562_+|tail	Phage tail sheath protein	tail	A0A0F7LBW9	Escherichia_phage	99.7	3.7e-225
QBG41975.1|1020574_1021093_+|tail	Phage tail tube protein FII	tail	A0A0F7LDZ1	Escherichia_phage	100.0	1.4e-93
QBG41976.1|1021149_1021425_+|tail	Phage tail protein E	tail	A0A0F7LDQ8	Escherichia_phage	100.0	5.7e-41
QBG41977.1|1021569_1024017_+|tail	Phage-related minor tail protein	tail	Q858U7	Yersinia_virus	94.4	0.0e+00
QBG41978.1|1024031_1024532_+	Phage P2 GpU	NA	Q7Y4C7	Escherichia_virus	99.4	7.7e-84
QBG41979.1|1024509_1025673_+	Phage late control gene D protein (GPD)	NA	U5N3V4	Enterobacteria_phage	99.2	3.5e-204
QBG41980.1|1025754_1025973_+	DNA-binding transcriptional regulator	NA	A0A0F7LDQ9	Escherichia_phage	100.0	4.7e-38
QBG41981.1|1026291_1028574_-	pyruvate formate-lyase (inactive)	NA	A0A2P0VNR5	Tetraselmis_virus	41.5	1.0e-162
QBG41982.1|1028628_1029825_-	formate channel FocA	NA	NA	NA	NA	NA
QBG41983.1|1029891_1031652_-	protein involved in beta-methylthiolation of ribosomal protein S12	NA	NA	NA	NA	NA
QBG41984.1|1031781_1032474_+	hypothetical protein	NA	NA	NA	NA	NA
QBG41985.1|1032672_1033761_+	phosphohydroxythreonine aminotransferase / 3-phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	46.8	2.7e-81
QBG41986.1|1033831_1035115_+	3-phosphoshikimate-1-carboxyvinyltransferase	NA	NA	NA	NA	NA
QBG41987.1|1035370_1035943_-	site-specific DNA recombinase	NA	A0A0A7NPV4	Enterobacteria_phage	85.2	4.6e-85
QBG41988.1|1036482_1037097_-|tail	putative tail fiber assembly protein	tail	Q9MCR5	Enterobacteria_phage	60.5	2.5e-60
QBG41989.1|1037096_1037579_-|tail	putative side tail fiber protein	tail	K7P7Q7	Enterobacteria_phage	44.7	7.5e-28
QBG41990.1|1037619_1038867_-|tail	putative side tail fiber protein	tail	A0A0K2FIZ6	Escherichia_phage	43.7	2.0e-40
QBG41991.1|1038869_1039448_-|tail	Phage tail protein	tail	A4JWL7	Burkholderia_virus	66.8	1.7e-66
QBG41992.1|1039440_1040544_-|plate	Baseplate J-like protein	plate	Q6QI99	Burkholderia_phage	55.2	1.4e-106
QBG41993.1|1040534_1040882_-	Gene 25-like lysozyme	NA	Q6QIA0	Burkholderia_phage	62.4	5.9e-35
QBG41994.1|1040936_1041533_-|plate	Phage-related baseplate assembly protein	plate	A4JWL4	Burkholderia_virus	45.2	3.2e-36
QBG41995.1|1041529_1042684_-	Phage late control gene D protein (GPD)	NA	Q6QIA2	Burkholderia_phage	47.6	1.9e-85
QBG41996.1|1042671_1042884_-	Phage Tail Protein X	NA	Q6QIA3	Burkholderia_phage	57.1	1.2e-17
QBG41997.1|1042883_1043768_-	Phage P2 GpU	NA	A4JWL1	Burkholderia_virus	47.9	6.8e-51
QBG41998.1|1043767_1046719_-|tail	Phage-related minor tail protein	tail	A4JWL0	Burkholderia_virus	29.9	9.8e-86
QBG41999.1|1046876_1047212_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42000.1|1047309_1047591_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42001.1|1047593_1048115_-|tail	Phage tail tube protein FII	tail	A4JWK6	Burkholderia_virus	67.6	1.8e-67
QBG42002.1|1048114_1049542_-|tail	Phage tail sheath protein	tail	A4JWK5	Burkholderia_virus	76.3	4.5e-214
QBG42003.1|1049531_1049783_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42004.1|1049782_1050247_-	Gp37 protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
QBG42005.1|1050246_1050693_-	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
QBG42006.1|1050694_1051033_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42007.1|1051042_1051996_-	hypothetical protein	NA	A4JWK0	Burkholderia_virus	43.8	3.4e-64
QBG42008.1|1052010_1053126_-	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.6	9.4e-98
QBG42009.1|1053340_1053799_-	Phage virion morphogenesis family protein	NA	Q6QIB8	Burkholderia_phage	44.8	2.6e-30
QBG42010.1|1053801_1054623_-	Phage Mu protein F like protein	NA	A4JWJ6	Burkholderia_virus	61.9	1.8e-98
QBG42011.1|1054603_1056100_-	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.0	9.7e-167
QBG42012.1|1056099_1057695_-	Terminase-like family protein	NA	A4JWJ4	Burkholderia_virus	62.8	6.5e-185
QBG42013.1|1057691_1058237_-	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
QBG42014.1|1058236_1058548_-	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
QBG42015.1|1058547_1058874_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	48.6	1.1e-17
QBG42016.1|1058870_1059521_-	hypothetical protein	NA	J9SVN7	Pseudomonas_phage	32.9	2.8e-09
QBG42017.1|1059504_1060212_-	membrane-bound lytic transglycosylase F	NA	Q5ZQZ1	Pseudomonas_phage	58.2	3.1e-62
QBG42018.1|1060247_1060598_-	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	1.5e-22
QBG42019.1|1060728_1061457_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42020.1|1061432_1061834_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42021.1|1061835_1062051_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42022.1|1062241_1063006_+	DNA adenine methyltransferase	NA	A2I2Y7	Vibrio_virus	64.4	5.2e-100
QBG42023.1|1063122_1063479_-	DicA DNA-binding transcriptional repressor	NA	NA	NA	NA	NA
QBG42024.1|1063572_1063761_+	hypothetical protein	NA	Q5ZQZ9	Pseudomonas_phage	71.0	3.9e-17
QBG42025.1|1063813_1064122_+	hypothetical protein	NA	Q5ZR02	Pseudomonas_phage	55.9	2.7e-23
QBG42026.1|1064132_1065053_+	hypothetical protein	NA	A4JWN3	Burkholderia_virus	56.2	1.6e-74
QBG42027.1|1065052_1065370_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42028.1|1065385_1067155_+	Integrase core domain protein	NA	A4JWN2	Burkholderia_virus	69.4	1.5e-227
QBG42029.1|1067165_1068332_+	hypothetical protein	NA	A4JWN1	Burkholderia_virus	59.4	2.2e-121
QBG42030.1|1068334_1068604_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42031.1|1068631_1069162_+	Bacteriophage Mu Gam like protein	NA	L7P7T1	Pseudomonas_phage	66.7	1.2e-58
QBG42032.1|1069259_1069454_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42033.1|1069450_1069723_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42034.1|1069732_1070029_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42035.1|1070043_1070259_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42036.1|1070255_1070939_+	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	36.1	1.1e-32
QBG42037.1|1070935_1071166_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42038.1|1071155_1071362_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42039.1|1071363_1071813_+	hypothetical protein	NA	A4JWM5	Burkholderia_virus	45.1	6.1e-24
QBG42040.1|1071784_1072174_+	Mor transcription activator family protein	NA	Q6QIE8	Burkholderia_phage	54.2	1.5e-31
>prophage 2
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	1283500	1329209	5187769	head,integrase,tRNA,tail,capsid,portal	Enterobacteria_phage(57.45%)	54	1281818:1281832	1310412:1310426
1281818:1281832	attL	GCTGCCAGCGGGAAA	NA	NA	NA	NA
QBG42240.1|1283500_1284607_-|tRNA	tRNA-specific 2-thiouridylase	tRNA	NA	NA	NA	NA
QBG42241.1|1284660_1285122_-	HMP-PP hydrolase /thiamine pyrophosphate hydrolase (multifunctional)	NA	NA	NA	NA	NA
QBG42242.1|1285131_1285785_-	23S rRNA pseudouridine 2457 synthase	NA	NA	NA	NA	NA
QBG42243.1|1285956_1287207_+	isocitrate dehydrogenase	NA	Q77Z09	Phage_21	100.0	3.8e-23
QBG42244.1|1287320_1288463_-|integrase	putative integrase	integrase	Q77Z02	Phage_21	100.0	3.6e-206
QBG42245.1|1288452_1288689_-	putative excisionase	NA	NA	NA	NA	NA
QBG42246.1|1288828_1289068_-	hypothetical protein	NA	M1FPC8	Enterobacteria_phage	96.2	4.7e-39
QBG42247.1|1289051_1289378_-	hypothetical protein	NA	A5VWB6	Enterobacteria_phage	95.7	9.8e-48
QBG42248.1|1290153_1290336_-	hypothetical protein	NA	A0A1U8QQC1	Enterobacteria_phage	98.3	1.8e-27
QBG42249.1|1290332_1291013_-	putative exonuclease	NA	A0A0P0ZCD4	Stx2-converting_phage	100.0	1.6e-132
QBG42250.1|1291009_1291795_-	RecT family protein	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
QBG42251.1|1291800_1292097_-	Host-nuclease inhibitor protein Gam	NA	A0A1I9LJN1	Stx_converting_phage	98.0	8.9e-48
QBG42252.1|1292172_1292379_-	killing protein KilR	NA	K7P6H3	Enterobacteria_phage	85.3	3.2e-28
QBG42253.1|1292974_1293730_-	HTH-type transcriptional regulator PrtR	NA	Q76H56	Enterobacteria_phage	75.0	1.4e-92
QBG42254.1|1293768_1293999_+	hypothetical protein	NA	A0A2H4FNF3	Salmonella_phage	68.0	1.5e-21
QBG42255.1|1294068_1294608_+	phage protein YdaT	NA	K7PJT7	Enterobacteria_phage	67.0	2.6e-61
QBG42256.1|1294619_1295624_+	putative defective phage replication protein O	NA	A0A0M5M7Y1	Salmonella_phage	64.1	8.7e-111
QBG42257.1|1295620_1296322_+	Replication protein P	NA	M1FJ72	Enterobacteria_phage	97.0	1.5e-125
QBG42258.1|1296571_1300837_+	adhesin	NA	NA	NA	NA	NA
QBG42259.1|1300873_1301917_-	acetyl esterase	NA	NA	NA	NA	NA
QBG42260.1|1302364_1302820_+	DNA base-flipping protein	NA	I6PD71	Cronobacter_phage	66.9	1.6e-59
QBG42261.1|1302819_1302990_+	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	69.8	2.4e-13
QBG42262.1|1302982_1303273_+	hypothetical protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
QBG42263.1|1303269_1303632_+	endodeoxyribonuclease RUS (Holliday junction resolvase)	NA	K7PM48	Enterobacteria_phage	95.7	1.6e-59
QBG42264.1|1303631_1303769_+	small protein YlcG	NA	K7PHH3	Enterobacteria_phage	69.8	1.4e-08
QBG42265.1|1303765_1304455_+	Phage antitermination protein Q	NA	I6PDF8	Cronobacter_phage	48.5	4.9e-57
QBG42266.1|1304776_1305082_+	hypothetical protein	NA	A0A286N2Q5	Klebsiella_phage	87.6	7.0e-40
QBG42267.1|1305068_1305545_+	Phage lysozyme	NA	K7PKV2	Enterobacteria_phage	94.9	7.3e-84
QBG42268.1|1305541_1306003_+	putative murein endopeptidase	NA	A0A0K2FJD0	Enterobacteria_phage	97.4	2.7e-75
QBG42269.1|1306034_1306328_-	hypothetical protein	NA	K7PL54	Enterobacteria_phage	92.8	7.0e-45
QBG42270.1|1306808_1307135_+	TonB energy transducing system - TonB subunit	NA	H6WZK5	Escherichia_phage	72.2	3.7e-39
QBG42271.1|1307257_1307611_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42272.1|1308087_1308633_+	DNA packaging protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	6.8e-94
QBG42273.1|1308607_1310533_+|tail	putative tail fiber assembly protein	tail	A0A0K2FJ14	Enterobacteria_phage	99.1	0.0e+00
1310412:1310426	attR	TTTCCCGCTGGCAGC	NA	NA	NA	NA
QBG42274.1|1310529_1310736_+	gpW	NA	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
QBG42275.1|1310732_1312334_+|portal	Phage portal protein, lambda family	portal	A0A0K2FJC0	Enterobacteria_phage	98.9	1.4e-309
QBG42276.1|1312314_1313634_+	putative inner membrane peptidase	NA	A0A2I6TC87	Escherichia_phage	97.7	1.1e-230
QBG42277.1|1313643_1313976_+|head	Bacteriophage lambda head decoration protein D	head	A0A2R9YJN3	Escherichia_phage	99.1	3.8e-55
QBG42278.1|1314031_1315057_+|capsid	Phage major capsid protein E	capsid	C6ZCY2	Enterobacteria_phage	99.4	7.8e-192
QBG42279.1|1315098_1315497_+	hypothetical protein	NA	A0A0K2FIR1	Enterobacteria_phage	98.5	1.0e-62
QBG42280.1|1315508_1315862_+	Phage Head-Tail Attachment	NA	A0A2R9YJJ5	Escherichia_phage	98.3	2.2e-61
QBG42281.1|1315873_1316452_+|tail	Prophage minor tail protein Z (GPZ)	tail	A0A2R9YJK4	Escherichia_phage	92.7	5.9e-80
QBG42282.1|1316448_1316844_+|tail	Phage minor tail protein U	tail	A0A2R9YJI2	Escherichia_phage	98.5	2.9e-70
QBG42283.1|1316851_1317592_+	Bacterial Ig-like domain (group 2)	NA	A0A2I6TC77	Escherichia_phage	98.0	1.6e-130
QBG42284.1|1317607_1318030_+|tail	Bacteriophage lambda minor tail protein (GpG)	tail	A0A0K2FIQ8	Enterobacteria_phage	94.3	2.2e-68
QBG42285.1|1318011_1318446_+|tail	Minor tail protein T	tail	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
QBG42286.1|1318438_1321000_+|tail	putative tail protein	tail	A0A0K2FI43	Enterobacteria_phage	98.4	0.0e+00
QBG42287.1|1320996_1321326_+|tail	Phage minor tail protein	tail	A0A0K2FIE9	Enterobacteria_phage	99.1	2.8e-58
QBG42288.1|1321325_1322024_+|tail	Phage minor tail protein L	tail	A0A0K2FJ01	Enterobacteria_phage	99.6	5.1e-134
QBG42289.1|1322172_1322772_+	NlpC/P60 family protein	NA	K7PLW1	Enterobacteria_phage	97.5	1.5e-118
QBG42290.1|1322768_1323311_+|tail	Bacteriophage lambda tail assembly protein I	tail	A0A291AWV5	Escherichia_phage	84.1	1.3e-76
QBG42291.1|1323371_1326854_+	Fibronectin type III protein	NA	A0A291AWT4	Escherichia_phage	90.3	0.0e+00
QBG42292.1|1326912_1328934_+	putative membrane protein	NA	A0A0E3M0V5	Enterobacteria_phage	72.3	7.2e-181
QBG42293.1|1328930_1329209_+	hypothetical protein	NA	A0A0E3JSQ1	Enterobacteria_phage	55.4	9.9e-25
>prophage 3
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	1447785	1524757	5187769	head,integrase,tail,protease,transposase,portal,lysis	Escherichia_phage(25.0%)	84	1447066:1447082	1472881:1472897
1447066:1447082	attL	CCGCAATGAATGCGGGT	NA	NA	NA	NA
QBG42420.1|1447785_1448991_-|transposase	putative IS1 transposase	transposase	NA	NA	NA	NA
QBG42421.1|1449115_1451791_-	pyruvate formate-lyase deactivase (multifunctional)	NA	NA	NA	NA	NA
QBG42422.1|1452267_1452915_+	putative inner membrane protein	NA	NA	NA	NA	NA
QBG42423.1|1452941_1453097_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42424.1|1453072_1453234_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42425.1|1453607_1455284_+	peptide ABC transporter - periplasmic binding protein	NA	NA	NA	NA	NA
QBG42426.1|1455369_1456290_+	murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit	NA	NA	NA	NA	NA
QBG42427.1|1456304_1457213_+	murein tripeptide ABC transporter / peptide ABC transporter - putative membrane subunit	NA	NA	NA	NA	NA
QBG42428.1|1457224_1458238_+	murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit	NA	G9BWD6	Planktothrix_phage	31.7	2.0e-14
QBG42429.1|1458234_1459239_+	murein tripeptide ABC transporter / peptide ABC transporter - putative ATP binding subunit	NA	G3M9Y6	Bacillus_virus	30.7	2.3e-15
QBG42430.1|1459291_1459621_-	DUF440 domain-containing protein YciU	NA	NA	NA	NA	NA
QBG42431.1|1459655_1461116_-	cardiolipin synthase	NA	NA	NA	NA	NA
QBG42432.1|1461486_1462740_-	K+ channel Kch monomer	NA	NA	NA	NA	NA
QBG42433.1|1463039_1463336_-	putative enzyme	NA	NA	NA	NA	NA
QBG42434.1|1463559_1464276_+	TonB energy transducing system - TonB subunit	NA	NA	NA	NA	NA
QBG42435.1|1464315_1464714_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
QBG42436.1|1464818_1465358_-	putative inner membrane protein	NA	NA	NA	NA	NA
QBG42437.1|1465387_1466131_-	putative inner membrane protein	NA	NA	NA	NA	NA
QBG42438.1|1466486_1467125_+	OmpW, outer membrane protein	NA	NA	NA	NA	NA
QBG42439.1|1467170_1468301_-|integrase	putative integrase	integrase	O21940	Phage_21	51.4	3.4e-103
QBG42440.1|1468591_1471063_-	phage protein YdfE	NA	A0A192Y6E0	Salmonella_phage	56.0	5.7e-55
QBG42441.1|1471155_1471347_-	phage protein YdfD	NA	NA	NA	NA	NA
QBG42442.1|1471343_1471532_-	cell division inhibition protein	NA	NA	NA	NA	NA
QBG42443.1|1472097_1472316_-	phage protein RzpQ	NA	NA	NA	NA	NA
QBG42444.1|1472345_1472474_-	small protein YdfB	NA	NA	NA	NA	NA
QBG42445.1|1472475_1472712_-	phage protein YdfA	NA	M4QQ57	Salicola_phage	51.1	1.4e-06
QBG42446.1|1472903_1473620_-	DicA DNA-binding transcriptional repressor	NA	H9C160	Pectobacterium_phage	42.0	1.7e-52
1472881:1472897	attR	CCGCAATGAATGCGGGT	NA	NA	NA	NA
QBG42447.1|1473669_1473885_+	DNA-binding transcriptional regulator for DicB	NA	NA	NA	NA	NA
QBG42448.1|1473881_1474307_+	phage protein YdaT	NA	NA	NA	NA	NA
QBG42449.1|1474404_1475292_+	putative defective phage replication protein O	NA	S5FM81	Shigella_phage	55.7	7.3e-61
QBG42450.1|1475298_1476045_+	putative DNA replication protein	NA	A0A088CBP4	Shigella_phage	83.8	4.0e-113
QBG42451.1|1476066_1476837_+	putative DNA-binding protein	NA	A0A0U2SAW4	Escherichia_phage	64.5	1.6e-80
QBG42452.1|1476852_1477278_+	hypothetical protein	NA	A0A0U2QQN3	Escherichia_phage	94.0	2.2e-63
QBG42453.1|1477452_1478118_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42454.1|1478298_1478511_+	small toxic polypeptide HokD	NA	A0A0U2QV81	Escherichia_phage	90.0	5.2e-26
QBG42455.1|1478952_1480008_+	phage protein YdfU	NA	A0A291AWV9	Escherichia_phage	48.4	4.0e-90
QBG42456.1|1480008_1480389_+	endodeoxyribonuclease RUS (Holliday junction resolvase)	NA	V5URS4	Shigella_phage	64.5	2.9e-35
QBG42457.1|1480385_1481207_+	putative antitermination protein Q	NA	K7P7B9	Enterobacteria_phage	60.1	1.7e-80
QBG42458.1|1481433_1481631_+	hypothetical protein	NA	Q9MC00	Enterobacteria_phage	98.5	6.1e-29
QBG42459.1|1481782_1482832_+	DNA adenine methyltransferase	NA	A0A0N7KZF8	Stx2-converting_phage	95.4	4.4e-198
QBG42460.1|1484045_1484381_-|lysis	inhibitor of sS proteolysis	lysis	Q8HAJ1	Enterobacteria_phage	74.8	5.2e-44
QBG42461.1|1484641_1486495_+	putative 9-O-acetyl-N-acetylneuraminate esterase	NA	Q08JA2	Stx2-converting_phage	90.3	0.0e+00
QBG42462.1|1486645_1486861_+|lysis	putative phage lysis protein	lysis	G9L6J5	Escherichia_phage	100.0	9.0e-34
QBG42463.1|1486865_1487210_+	phage protein YdfR	NA	K7PGU6	Enterobacteria_phage	95.2	2.8e-37
QBG42464.1|1487175_1487448_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42465.1|1487553_1488087_+	putative lysozyme	NA	Q6H9V6	Enterobacteria_phage	95.5	4.8e-100
QBG42466.1|1488379_1488511_+	hypothetical protein	NA	A0A0P0ZG36	Escherichia_phage	74.4	7.5e-07
QBG42467.1|1488729_1489224_+	putative murein endopeptidase	NA	Q9ZXB6	Enterobacteria_phage	87.7	1.7e-72
QBG42468.1|1489220_1489436_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42469.1|1489634_1489835_-	phage protein YnfO	NA	H6WZK6	Escherichia_phage	98.5	4.3e-30
QBG42470.1|1489876_1490242_+	HNH endonuclease	NA	B6ETE5	Enterobacteria_phage	93.4	2.5e-60
QBG42471.1|1490532_1491096_+	Terminase small subunit	NA	A0A0P0ZD56	Stx2-converting_phage	92.0	1.6e-82
QBG42472.1|1491092_1492754_+	putative DNA-binding transcriptional regulator	NA	B6DZ98	Enterobacteria_phage	98.7	0.0e+00
QBG42473.1|1492817_1494755_+|head,protease	Caudovirus prohead protease	head,protease	H6WZL0	Escherichia_phage	100.0	0.0e+00
QBG42474.1|1494799_1495021_+	hypothetical protein	NA	B6DZA0	Enterobacteria_phage	100.0	5.8e-36
QBG42475.1|1494966_1497552_+|portal	Phage portal protein	portal	A0A0P0ZDD0	Stx2-converting_phage	100.0	0.0e+00
QBG42476.1|1497548_1497875_+|head,tail	Phage gp6-like head-tail connector protein	head,tail	A0A0P0ZBH1	Stx2-converting_phage	100.0	9.2e-54
QBG42477.1|1497884_1498235_+|head,tail	Phage head-tail joining protein	head,tail	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
QBG42478.1|1498231_1498678_+	hypothetical protein	NA	A0A0N7KZI9	Stx2-converting_phage	100.0	5.2e-76
QBG42479.1|1498674_1499019_+	hypothetical protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
QBG42480.1|1499085_1499802_+	Immunoglobulin I-set domain protein	NA	A0A0P0ZDV1	Stx2-converting_phage	99.6	3.6e-127
QBG42481.1|1499816_1500191_+|tail	Phage tail assembly chaperone	tail	A0A0P0ZE84	Stx2-converting_phage	99.2	1.7e-64
QBG42482.1|1500286_1500496_+	hypothetical protein	NA	H6WZM0	Escherichia_phage	100.0	1.5e-33
QBG42483.1|1500543_1503786_+	Tail length tape measure protein	NA	A0A0P0ZCJ4	Stx2-converting_phage	91.5	0.0e+00
QBG42484.1|1503778_1504120_+|tail	Phage minor tail protein	tail	A0A0P0ZBQ8	Stx2-converting_phage	95.6	9.0e-60
QBG42485.1|1504119_1504818_+|tail	Phage minor tail protein L	tail	B6DZB1	Enterobacteria_phage	97.4	5.8e-130
QBG42486.1|1504828_1505572_+	NlpC/P60 family protein	NA	Q6H9T4	Enterobacteria_phage	97.6	4.3e-147
QBG42487.1|1505568_1506150_+|tail	Bacteriophage lambda tail assembly protein I	tail	H6WZM5	Escherichia_phage	97.4	1.3e-90
QBG42488.1|1506492_1509966_+	Fibronectin type III protein	NA	A0A0P0ZBW1	Stx2-converting_phage	89.7	0.0e+00
QBG42489.1|1510033_1510492_+	phage protein LomR	NA	Q9EV15	Enterobacteria_phage	89.0	9.5e-65
QBG42490.1|1512161_1512623_+|transposase	transposase/IS protein	transposase	NA	NA	NA	NA
QBG42491.1|1513864_1514602_-	hypothetical protein	NA	NA	NA	NA	NA
QBG42492.1|1514843_1516274_+	hypothetical protein	NA	A0A0F7LDR4	Escherichia_phage	47.9	3.8e-112
QBG42493.1|1516289_1516817_+|tail	putative tail fiber assembly protein	tail	A0A0C4UR05	Shigella_phage	77.7	8.4e-73
QBG42494.1|1516847_1517381_-|tail	Caudovirales tail fiber assembly protein	tail	A0A077SL44	Escherichia_phage	70.1	1.8e-67
QBG42495.1|1517382_1518168_-	putative membrane protein	NA	Q858V4	Yersinia_virus	77.8	1.3e-109
QBG42496.1|1518340_1518430_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42497.1|1518776_1519433_-	putative SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QBG42498.1|1519501_1519771_+	hypothetical protein	NA	K7PMH7	Enterobacteria_phage	79.4	9.3e-20
QBG42499.1|1519885_1520056_+	hypothetical protein	NA	A0A0U2RK60	Escherichia_phage	62.5	9.4e-10
QBG42500.1|1520182_1520740_-	Phage regulatory protein Rha	NA	Q8H9L9	Vibrio_phage	63.8	4.2e-30
QBG42501.1|1521387_1522194_-	tryptophan synthase, alpha subunit	NA	NA	NA	NA	NA
QBG42502.1|1522193_1523387_-	tryptophan synthase, beta subunit	NA	NA	NA	NA	NA
QBG42503.1|1523398_1524757_-	indole-3-glycerol phosphate synthase / phosphoribosylanthranilate isomerase	NA	A0A0P0IR83	Acinetobacter_phage	41.2	3.9e-37
>prophage 4
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	1751084	1759911	5187769		Escherichia_phage(66.67%)	10	NA	NA
QBG42702.1|1751084_1752299_-	mannonate/altronate dehydratase	NA	Q6A202	Oenococcus_phage	29.2	8.2e-47
QBG42703.1|1752504_1752831_-	hypothetical protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
QBG42704.1|1752965_1753307_+	hypothetical protein	NA	NA	NA	NA	NA
QBG42705.1|1753341_1753902_+	spermidine acetyltransferase	NA	NA	NA	NA	NA
QBG42706.1|1753904_1754651_-	YnfC lipoprotein	NA	NA	NA	NA	NA
QBG42707.1|1754722_1755028_+	DUF1161 domain-containing protein YnfD	NA	NA	NA	NA	NA
QBG42708.1|1755226_1757653_+	oxidoreductase subunit	NA	A0A077SK27	Escherichia_phage	49.2	1.7e-213
QBG42709.1|1757740_1758475_+	oxidoreductase subunit	NA	A0A077SK27	Escherichia_phage	48.3	1.4e-46
QBG42710.1|1758471_1759209_+	oxidoreductase subunit	NA	A0A077SK27	Escherichia_phage	41.1	4.6e-45
QBG42711.1|1759293_1759911_+	oxidoreductase, Fe-S subunit	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
>prophage 5
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	2033758	2097623	5187769	head,tRNA,tail,plate,protease,capsid,portal	Escherichia_phage(28.57%)	71	NA	NA
QBG42979.1|2033758_2035531_-|tRNA	aspartyl-tRNA synthetase	tRNA	NA	NA	NA	NA
QBG42980.1|2035840_2036407_+	putative hydrolase	NA	NA	NA	NA	NA
QBG42981.1|2036403_2037222_+	hypothetical protein	NA	Q859D1	Escherichia_coli_phage	99.2	6.5e-72
QBG42982.1|2037274_2037670_+	putative inner membrane protein	NA	NA	NA	NA	NA
QBG42983.1|2037710_2038454_+	putative methyltransferase	NA	F5B419	Synechococcus_phage	30.0	4.6e-24
QBG42984.1|2038450_2039422_+	putative S-adenosyl-L-methionine-dependent methyltransferase	NA	NA	NA	NA	NA
QBG42985.1|2039457_2041887_-	trimethylamine N-oxide reductase III, TorZ subunit	NA	NA	NA	NA	NA
QBG42986.1|2041911_2043012_-	trimethylamine N-oxide reductase III, c-type cytochrome subunit	NA	NA	NA	NA	NA
QBG42987.1|2043399_2044146_-	copper homeostasis protein	NA	NA	NA	NA	NA
QBG42988.1|2044159_2044726_-	putative metal-binding enzyme	NA	NA	NA	NA	NA
QBG42989.1|2044941_2046675_+|tRNA	arginyl-tRNA synthetase	tRNA	A0A2K9L6Z2	Tupanvirus	33.7	8.8e-87
QBG42990.1|2046727_2047120_-	flagellar protein	NA	NA	NA	NA	NA
QBG42991.1|2047119_2049198_-	flagellar biosynthesis protein FlhA	NA	NA	NA	NA	NA
QBG42992.1|2049190_2050339_-	flagellar biosynthesis protein FlhB	NA	NA	NA	NA	NA
QBG42993.1|2050527_2051172_-	CheZ	NA	NA	NA	NA	NA
QBG42994.1|2051182_2051572_-	putative DNA-binding response regulator in two-component system with YedV	NA	A0A2K9L4R0	Tupanvirus	32.0	1.3e-06
QBG42995.1|2051586_2052636_-	putative response regulator in two-component system with YpdA	NA	Q56AR1	Bacillus_thuringiensis_phage	32.8	1.0e-05
QBG42996.1|2052638_2053499_-	chemotaxis protein methyltransferase	NA	NA	NA	NA	NA
QBG42997.1|2053624_2053744_-	methyl accepting chemotaxis protein - dipeptide sensing	NA	NA	NA	NA	NA
QBG42998.1|2053789_2055451_-	methyl accepting chemotaxis protein II - aspartate sensing	NA	A0A2H4J162	uncultured_Caudovirales_phage	40.3	1.7e-10
QBG42999.1|2055595_2056099_-	chemotaxis signaling complex - aspartate sensing	NA	NA	NA	NA	NA
QBG43000.1|2056119_2058084_-	Chemotaxis protein CheA	NA	NA	NA	NA	NA
QBG43001.1|2058088_2059015_-	MotB protein, enables flagellar motor rotation, linking torque machinery to cell wall	NA	NA	NA	NA	NA
QBG43002.1|2059011_2059899_-	MotA protein, proton conductor component of motor, no effect on switching	NA	NA	NA	NA	NA
QBG43003.1|2060025_2060604_-	FlhDC DNA-binding transcriptional dual regulator	NA	NA	NA	NA	NA
QBG43004.1|2060606_2060957_-	FlhDC DNA-binding transcriptional dual regulator	NA	NA	NA	NA	NA
QBG43005.1|2061736_2062165_+	universal stress protein	NA	NA	NA	NA	NA
QBG43006.1|2062171_2063596_-	trehalose-6-phosphate synthase	NA	NA	NA	NA	NA
QBG43007.1|2063570_2064371_-	trehalose-6-phosphate phosphatase	NA	NA	NA	NA	NA
QBG43008.1|2064537_2065524_-	arabinose ABC transporter - membrane subunit	NA	NA	NA	NA	NA
QBG43009.1|2065538_2067053_-	arabinose ABC transporter - ATP binding subunit	NA	A0A285PWH2	Cedratvirus	29.7	1.3e-12
QBG43010.1|2067122_2068112_-	arabinose ABC transporter - periplasmic binding protein	NA	NA	NA	NA	NA
QBG43011.1|2068906_2069410_+	putative ferritin-like protein	NA	NA	NA	NA	NA
QBG43012.1|2069487_2069739_-	YecJ	NA	NA	NA	NA	NA
QBG43013.1|2070203_2070527_+	YecR	NA	NA	NA	NA	NA
QBG43014.1|2070698_2071196_+	ferritin iron storage protein	NA	NA	NA	NA	NA
QBG43015.1|2071233_2071473_-	YecH	NA	NA	NA	NA	NA
QBG43016.1|2071663_2072875_+	tyrosine:H+ symporter TyrP	NA	NA	NA	NA	NA
QBG43017.1|2072925_2073591_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43018.1|2074062_2074482_-	hypothetical protein	NA	G8C7Q7	Escherichia_phage	68.8	1.8e-49
QBG43019.1|2074648_2074813_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43020.1|2074919_2075693_-	Phage late control gene D protein (GPD)	NA	R9TNM7	Vibrio_phage	30.7	9.2e-28
QBG43021.1|2076082_2076472_-	Phage P2 GpU	NA	E5FFG4	Burkholderia_phage	37.9	1.0e-14
QBG43022.1|2076507_2078148_-	hypothetical protein	NA	A0A2I7R3J9	Vibrio_phage	29.3	1.2e-19
QBG43023.1|2078256_2078538_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43024.1|2078550_2079063_-|tail	Phage tail tube protein FII	tail	NA	NA	NA	NA
QBG43025.1|2079080_2080583_-|tail	Phage tail sheath protein	tail	R9TMQ0	Vibrio_phage	33.5	5.5e-69
QBG43026.1|2080579_2080969_-	hypothetical protein	NA	A0A2H4EXG4	Aeromonas_phage	30.8	9.4e-05
QBG43027.1|2080968_2082153_-	hypothetical protein	NA	J9QDX3	Clostridium_phage	35.2	2.5e-16
QBG43028.1|2082145_2082772_-|tail	Phage tail protein	tail	A0A193GYD1	Enterobacter_phage	38.8	2.0e-25
QBG43029.1|2082774_2083695_-|plate	Baseplate J-like protein	plate	D5LGZ3	Escherichia_phage	47.8	6.4e-68
QBG43030.1|2083691_2084081_-	Gene 25-like lysozyme	NA	D4HTV2	Vibrio_phage	51.6	2.1e-20
QBG43031.1|2084035_2084938_-|plate	Phage-related baseplate assembly protein	plate	NA	NA	NA	NA
QBG43032.1|2084918_2085455_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43033.1|2085451_2086132_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43034.1|2086163_2086544_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43035.1|2086540_2086960_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43036.1|2086994_2088029_-|capsid	Phage major capsid protein E	capsid	A0A2I6TCE5	Escherichia_phage	56.5	6.6e-106
QBG43037.1|2088087_2088417_-|head	Bacteriophage lambda head decoration protein D	head	A0A2R9YJN3	Escherichia_phage	39.5	2.0e-08
QBG43038.1|2088416_2089724_-|protease	protease IV	protease	A0A2I6TC87	Escherichia_phage	53.7	4.9e-106
QBG43039.1|2089723_2091298_-|portal	Phage portal protein, lambda family	portal	E4WL21	Enterobacteria_phage	64.0	8.6e-190
QBG43040.1|2091294_2091528_-	gpW	NA	NA	NA	NA	NA
QBG43041.1|2091527_2093408_-|tail	putative tail fiber assembly protein	tail	A0A1I9KF19	Aeromonas_phage	53.2	1.1e-191
QBG43042.1|2093376_2093943_-	hypothetical protein	NA	A0A1I9KFT4	Aeromonas_phage	46.2	2.9e-31
QBG43043.1|2094311_2094557_+	hypothetical protein	NA	NA	NA	NA	NA
QBG43044.1|2094818_2095298_-	hypothetical protein	NA	A0A222YWL8	Escherichia_phage	68.8	4.6e-62
QBG43045.1|2095297_2095570_-	hypothetical protein	NA	A0A0A0YPY6	Escherichia_phage	42.9	9.8e-09
QBG43046.1|2095569_2095953_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43047.1|2096065_2096737_-	Phage antitermination protein Q	NA	Q7Y3X2	Yersinia_phage	33.5	1.9e-16
QBG43048.1|2096736_2097030_-	hypothetical protein	NA	A0A0U2KD41	Escherichia_phage	70.5	3.3e-34
QBG43049.1|2097026_2097623_-	hypothetical protein	NA	H9C173	Pectobacterium_phage	64.1	1.5e-70
>prophage 6
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	2105991	2118160	5187769	integrase	Pectobacterium_phage(66.67%)	19	2097959:2097973	2119935:2119949
2097959:2097973	attL	TCAAACACCACACAG	NA	NA	NA	NA
QBG43059.1|2105991_2106780_-	ORF6N domain protein	NA	A0A0P0ZC44	Stx2-converting_phage	69.8	1.1e-39
QBG43060.1|2107052_2107274_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43061.1|2107348_2107465_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43062.1|2107461_2107686_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43063.1|2107682_2107994_-	hypothetical protein	NA	A0A222YXX1	Escherichia_phage	65.7	1.2e-34
QBG43064.1|2107990_2108227_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43065.1|2108228_2108639_-	hypothetical protein	NA	NA	NA	NA	NA
QBG43066.1|2108677_2110093_-	primosome	NA	H9C165	Pectobacterium_phage	66.7	6.6e-173
QBG43067.1|2110082_2110838_-	hypothetical protein	NA	H9C164	Pectobacterium_phage	68.5	2.4e-41
QBG43068.1|2110834_2111059_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	54.1	6.1e-17
QBG43069.1|2111098_2111575_-	phage protein YdaT	NA	H9C162	Pectobacterium_phage	48.6	1.9e-23
QBG43070.1|2111633_2111864_-	hypothetical protein	NA	H6WRX5	Salmonella_phage	63.2	1.5e-21
QBG43071.1|2111962_2112376_+	DicA DNA-binding transcriptional repressor	NA	A0A1B5FPF4	Escherichia_phage	49.1	8.7e-09
QBG43072.1|2113386_2113707_+	hypothetical protein	NA	NA	NA	NA	NA
QBG43073.1|2113737_2115954_+	exonuclease VIII	NA	H9C157	Pectobacterium_phage	35.6	4.7e-101
QBG43074.1|2115950_2116520_+	hypothetical protein	NA	H9C156	Pectobacterium_phage	49.2	6.1e-37
QBG43075.1|2116519_2116702_+	hypothetical protein	NA	NA	NA	NA	NA
QBG43076.1|2116911_2117175_+	hypothetical protein	NA	H9C153	Pectobacterium_phage	38.0	1.2e-06
QBG43077.1|2117143_2118160_+|integrase	Phage integrase family protein	integrase	H9C152	Pectobacterium_phage	63.6	1.1e-126
2119935:2119949	attR	TCAAACACCACACAG	NA	NA	NA	NA
>prophage 7
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	2271682	2278134	5187769		Acidithiobacillus_phage(16.67%)	10	NA	NA
QBG43213.1|2271682_2273224_+	Integrase core domain protein	NA	K4I413	Acidithiobacillus_phage	46.4	1.7e-129
QBG43214.1|2273238_2273985_+	putative DNA replication protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QBG43215.1|2274148_2274418_+	hypothetical protein	NA	NA	NA	NA	NA
QBG43216.1|2274433_2274844_+	hypothetical protein	NA	NA	NA	NA	NA
QBG43217.1|2275064_2275883_+	hypothetical protein	NA	A0A2C9CX26	Yersinia_phage	38.6	8.8e-45
QBG43218.1|2275882_2276128_+	hypothetical protein	NA	NA	NA	NA	NA
QBG43219.1|2276221_2276695_+	phage protein YafX	NA	A0A2D0W9W4	Bordetella_phage	33.1	4.3e-12
QBG43220.1|2276710_2277187_+	putative DNA repair protein	NA	NA	NA	NA	NA
QBG43221.1|2277249_2277471_+	uncharacterized protein YeeT	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
QBG43222.1|2277489_2278134_+	hypothetical protein	NA	A0A2I6PI07	Pseudomonas_phage	32.9	1.8e-24
>prophage 8
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	2308937	2315240	5187769		Enterobacteria_phage(66.67%)	6	NA	NA
QBG43255.1|2308937_2309480_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	61.8	6.0e-50
QBG43256.1|2309484_2310363_-	dTDP-glucose pyrophosphorylase	NA	I7I009	Enterobacteria_phage	64.5	6.6e-107
QBG43257.1|2310420_2311320_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.8	1.7e-28
QBG43258.1|2311319_2312405_-	RmlB	NA	I7HTA3	Enterobacteria_phage	53.9	8.8e-101
QBG43259.1|2312777_2313671_-	putative uridylyltransferase subunit with GalU	NA	A0A127AW70	Bacillus_phage	42.0	3.0e-46
QBG43260.1|2313845_2315240_-	putative colanic acid biosynthesis protein	NA	A0A291LBB9	Klebsiella_phage	33.0	6.3e-19
>prophage 9
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	2409416	2418861	5187769		Enterobacteria_phage(85.71%)	10	NA	NA
QBG43332.1|2409416_2410553_+	hypothetical protein	NA	Q9EYF7	Enterobacteria_phage	96.7	6.1e-161
QBG43333.1|2410549_2412553_+	YehQ	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
QBG43334.1|2412677_2413139_+	hypothetical protein	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
QBG43335.1|2413179_2413650_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
QBG43336.1|2413696_2414416_-	putative response regulator in two-component system with YpdA	NA	NA	NA	NA	NA
QBG43337.1|2414412_2416098_-	putative sensory kinase in two-component system with YpdB	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
QBG43338.1|2416319_2417051_+	MlrA DNA binding transcriptional activator	NA	Q9EYF2	Enterobacteria_phage	98.5	6.3e-111
QBG43339.1|2417110_2417218_+	putative small membrane protein	NA	NA	NA	NA	NA
QBG43340.1|2417198_2417930_-	YehW/YehX/YehY/YehZ ABC transporter	NA	NA	NA	NA	NA
QBG43341.1|2417934_2418861_-	YehW/YehX/YehY/YehZ ABC transporter	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.8	2.6e-08
>prophage 10
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	2995452	3002592	5187769		Escherichia_phage(83.33%)	6	NA	NA
QBG43854.1|2995452_2998014_+	MutHLS complex, methyl-directed mismatch repair	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.8	1.6e-31
QBG43855.1|2998119_2998776_+	protein-tyrosine-phosphatase / phosphoprotein phosphatase	NA	A0A077SLQ6	Escherichia_phage	46.1	3.3e-50
QBG43856.1|2998826_2999594_-	putative DNA-binding transcriptional regulator, DEOR-type	NA	A0A077SK06	Escherichia_phage	57.4	9.7e-70
QBG43857.1|2999789_3000698_+	putative dehydrogenase, with NAD(P)-binding Rossmann-fold domain	NA	A0A077SLF7	Escherichia_phage	76.2	1.9e-117
QBG43858.1|3000694_3001957_+	hypothetical protein	NA	A0A077SLJ7	Escherichia_phage	61.4	2.2e-135
QBG43859.1|3001953_3002592_+	putative class II aldolase	NA	A0A077SK32	Escherichia_phage	74.5	1.4e-82
>prophage 11
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	4378475	4456626	5187769	head,tRNA,tail,plate,protease,capsid,holin,portal,terminase	Escherichia_phage(38.1%)	90	NA	NA
QBG45127.1|4378475_4378913_+|tRNA	D-Tyr-tRNATyr deacylase	tRNA	NA	NA	NA	NA
QBG45128.1|4378957_4379899_+	putative acetyltransferase	NA	NA	NA	NA	NA
QBG45129.1|4379962_4380871_-	acetyl esterase	NA	NA	NA	NA	NA
QBG45130.1|4381099_4381411_+	Toxin HigB-2	NA	NA	NA	NA	NA
QBG45131.1|4381411_4381702_+	Antitoxin igA-2	NA	NA	NA	NA	NA
QBG45132.1|4381786_4381999_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45133.1|4382060_4382339_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45134.1|4382735_4382954_+	putative transcriptional regulator	NA	NA	NA	NA	NA
QBG45135.1|4383138_4383879_-	hypothetical protein	NA	NA	NA	NA	NA
QBG45136.1|4383903_4384752_-	hypothetical protein	NA	NA	NA	NA	NA
QBG45137.1|4385041_4385284_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45138.1|4385465_4386395_-	formate dehydrogenase formation protein	NA	NA	NA	NA	NA
QBG45139.1|4386391_4387027_-	formate dehydrogenase-O, gamma subunit	NA	NA	NA	NA	NA
QBG45140.1|4387023_4387926_-	formate dehydrogenase-O, beta subunit	NA	NA	NA	NA	NA
QBG45141.1|4387938_4390353_-	formate dehydrogenase-O, alpha subunit	NA	NA	NA	NA	NA
QBG45142.1|4390401_4390989_-	formate dehydrogenase-O, alpha subunit	NA	NA	NA	NA	NA
QBG45143.1|4391182_4392016_+	affects formate dehydrogenase-N	NA	NA	NA	NA	NA
QBG45144.1|4392112_4392658_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45145.1|4393011_4394406_+	Sucrose porin precursor	NA	NA	NA	NA	NA
QBG45146.1|4394446_4394761_-	L-rhamnose mutarotase	NA	NA	NA	NA	NA
QBG45147.1|4394770_4395595_-	rhamnulose-1-phosphate aldolase monomer	NA	NA	NA	NA	NA
QBG45148.1|4395861_4397121_-	L-rhamnose isomerase	NA	NA	NA	NA	NA
QBG45149.1|4397117_4398587_-	L-rhamnulose kinase	NA	NA	NA	NA	NA
QBG45150.1|4398874_4399711_+	RhaS-L-rhamnose DNA-binding transcriptional activator	NA	NA	NA	NA	NA
QBG45151.1|4399694_4400633_+	RhaR transcriptional activator	NA	NA	NA	NA	NA
QBG45152.1|4400629_4401664_-	rhamnose / lyxose:H+ symporter	NA	NA	NA	NA	NA
QBG45153.1|4401948_4402569_+	superoxide dismutase (Mn)	NA	Q56AR7	Bacillus_thuringiensis_phage	58.9	5.4e-63
QBG45154.1|4402828_4403812_+	2-dehydro-3-deoxy-D-gluconate:H+ symporter	NA	NA	NA	NA	NA
QBG45155.1|4403960_4404635_+	protein involved in base analog detoxification	NA	NA	NA	NA	NA
QBG45156.1|4404805_4406179_-	EnvZ sensory histidine kinase	NA	W8CYF6	Bacillus_phage	25.9	3.8e-16
QBG45157.1|4406175_4406874_-	putative DNA-binding response regulator in two-component system with YedV	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
QBG45158.1|4407023_4407524_+	regulator of the Cpx response and possible chaperone involved in resistance to extracytoplasmic stress	NA	NA	NA	NA	NA
QBG45159.1|4407710_4408691_-	Tyrosine recombinase XerD	NA	S4TP66	Salmonella_phage	99.7	1.0e-185
QBG45160.1|4408760_4409054_-	Helix-turn-helix domain protein	NA	Q1JS37	Enterobacteria_phage	99.0	4.7e-49
QBG45161.1|4409190_4409463_+	Regulatory phage protein cox	NA	Q1JS36	Enterobacteria_phage	100.0	1.4e-47
QBG45162.1|4409632_4410133_+	hypothetical protein	NA	M1SV55	Escherichia_phage	100.0	2.6e-92
QBG45163.1|4410196_4410421_+	hypothetical protein	NA	S4TP68	Salmonella_phage	100.0	4.7e-33
QBG45164.1|4410420_4410720_+	hypothetical protein	NA	S4TUD1	Salmonella_phage	100.0	8.4e-46
QBG45165.1|4410722_4410947_+	hypothetical protein	NA	A0A0F7LDI3	Escherichia_phage	95.9	2.5e-34
QBG45166.1|4410943_4411219_+	hypothetical protein	NA	U5N3W1	Enterobacteria_phage	98.9	1.9e-44
QBG45167.1|4411291_4413484_+	Bacteriophage replication gene A protein (GPA)	NA	Q858T4	Yersinia_virus	97.5	0.0e+00
QBG45168.1|4414621_4415107_+	hypothetical protein	NA	Q854W5	Mycobacterium_virus	37.1	6.0e-09
QBG45169.1|4415173_4415773_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45170.1|4415855_4416797_-	hypothetical protein	NA	Q2P9W7	Enterobacteria_phage	73.7	2.0e-133
QBG45171.1|4417223_4418258_-|portal	Phage portal protein	portal	M1SV64	Escherichia_phage	99.7	1.9e-201
QBG45172.1|4418257_4420030_-	Terminase-like family protein	NA	A0A0F7LCK3	Escherichia_phage	99.8	0.0e+00
QBG45173.1|4420202_4421057_+|capsid	Phage capsid scaffolding protein (GPO) serine peptidase	capsid	Q94MB7	Escherichia_virus	88.0	2.7e-137
QBG45174.1|4421115_4422189_+|capsid	Phage major capsid protein	capsid	Q94MI3	Enterobacteria_phage	98.9	3.7e-200
QBG45175.1|4422192_4422936_+|terminase	Phage small terminase subunit	terminase	Q858W5	Yersinia_virus	98.8	2.7e-125
QBG45176.1|4423034_4423544_+|head	Phage head completion protein (GPL)	head	U5N0S3	Enterobacteria_phage	100.0	1.1e-90
QBG45177.1|4423543_4423747_+	Phage Tail Protein X	NA	A0A0F7LCN2	Escherichia_phage	100.0	3.0e-31
QBG45178.1|4423750_4424032_+|holin	Phage holin family 2	holin	A0A0F7LA12	Escherichia_phage	100.0	1.3e-43
QBG45179.1|4424031_4424529_+	Phage lysozyme	NA	A0A0F7LBS0	Escherichia_phage	100.0	3.1e-93
QBG45180.1|4424543_4424969_+	hypothetical protein	NA	U5N096	Enterobacteria_phage	98.6	1.7e-60
QBG45181.1|4424956_4425382_+	hypothetical protein	NA	Q858W0	Yersinia_virus	97.9	2.7e-66
QBG45182.1|4425368_4425527_+	hypothetical protein	NA	M1RZ27	Escherichia_phage	100.0	2.6e-22
QBG45183.1|4425489_4425957_+|tail	P2 phage tail completion protein R (GpR)	tail	Q7Y4E0	Escherichia_virus	98.7	2.5e-81
QBG45184.1|4425949_4426402_+	Phage virion morphogenesis family protein	NA	A0A0F7LBV9	Escherichia_phage	99.3	3.1e-76
QBG45185.1|4426468_4427104_+|plate	Phage-related baseplate assembly protein	plate	U5N3F0	Enterobacteria_phage	99.5	4.1e-114
QBG45186.1|4427100_4427448_+	Gene 25-like lysozyme	NA	A0A0F7LDQ1	Escherichia_phage	100.0	1.3e-58
QBG45187.1|4427452_4428361_+|plate	Baseplate J-like protein	plate	A0A0F7LCJ3	Escherichia_phage	99.7	2.6e-162
QBG45188.1|4428353_4428884_+|tail	Phage tail protein	tail	Q858V5	Yersinia_virus	99.4	1.3e-102
QBG45189.1|4428894_4431513_+|tail	putative side tail fiber assembly protein	tail	Q858V4	Yersinia_virus	73.0	3.4e-284
QBG45190.1|4432418_4433498_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45191.1|4433932_4435123_+|tail	Phage tail sheath protein	tail	A0A0F7LBW9	Escherichia_phage	100.0	1.6e-225
QBG45192.1|4435135_4435654_+|tail	Phage tail tube protein FII	tail	A0A0F7LDZ1	Escherichia_phage	99.4	9.4e-93
QBG45193.1|4435710_4435986_+|tail	Phage tail protein E	tail	A0A0F7LDQ8	Escherichia_phage	100.0	5.7e-41
QBG45194.1|4436130_4438578_+	Chromosome partition protein Smc	NA	Q7Y4C8	Escherichia_virus	96.9	0.0e+00
QBG45195.1|4438592_4439072_+	Phage P2 GpU	NA	A0A0F7LDE8	Escherichia_phage	100.0	6.6e-85
QBG45196.1|4439071_4440235_+	Phage late control gene D protein (GPD)	NA	U5N3V4	Enterobacteria_phage	99.5	1.4e-205
QBG45197.1|4440316_4440535_+	DNA-binding transcriptional regulator	NA	A0A0F7LDQ9	Escherichia_phage	100.0	4.7e-38
QBG45198.1|4440771_4441674_+	Zn2+ / Fe2+ / Cd2+ efflux transporter FieF	NA	NA	NA	NA	NA
QBG45199.1|4441619_4441724_-	hypothetical protein	NA	NA	NA	NA	NA
QBG45200.1|4441854_4442817_+	6-phosphofructokinase-1 monomer	NA	NA	NA	NA	NA
QBG45201.1|4443136_4444126_+	sulfate / thiosulfate ABC transporter - periplasmic binding protein Sbp	NA	NA	NA	NA	NA
QBG45202.1|4444232_4444988_+	CDP-diglyceride hydrolase / CDP-diacylglycerol pyrophosphatase	NA	NA	NA	NA	NA
QBG45203.1|4445042_4445810_-	triose phosphate isomerase monomer	NA	NA	NA	NA	NA
QBG45204.1|4445917_4446517_-	hypothetical protein	NA	NA	NA	NA	NA
QBG45205.1|4446617_4447058_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45206.1|4447269_4447569_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45207.1|4447595_4448024_+	stress protein involved in resistance to UV irradiation	NA	NA	NA	NA	NA
QBG45208.1|4448028_4448775_-	flavodoxin NADP+ reductase	NA	NA	NA	NA	NA
QBG45209.1|4448871_4449882_-	fructose 1,6-bisphosphatase II	NA	NA	NA	NA	NA
QBG45210.1|4450052_4451561_-	glycerol kinase	NA	NA	NA	NA	NA
QBG45211.1|4451583_4452429_-	glycerol channel GlpF	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	28.0	4.4e-15
QBG45212.1|4452859_4453099_+	cell division factor ZapB	NA	NA	NA	NA	NA
QBG45213.1|4453183_4453669_-	ribonuclease E inhibitor protein	NA	NA	NA	NA	NA
QBG45214.1|4453761_4454688_-	1,4-dihydroxy-2-naphthoate octaprenyltransferase	NA	NA	NA	NA	NA
QBG45215.1|4454754_4456086_-|protease	ATPase component of the HslVU protease	protease	A0A191ZC11	Erwinia_phage	29.9	1.7e-45
QBG45216.1|4456095_4456626_-|protease	peptidase component of the HslVU protease	protease	NA	NA	NA	NA
>prophage 12
CP036245	Escherichia coli strain S65EC chromosome, complete genome	5187769	5020871	5027652	5187769	transposase,holin	Shigella_phage(33.33%)	8	NA	NA
QBG45710.1|5020871_5022869_-|holin	choline:H+ symporter	holin	A0A2I7QNT1	Vibrio_phage	25.9	4.4e-21
QBG45711.1|5023023_5023842_-	IS3 element protein InsF	NA	A0A0P0I4A4	Acinetobacter_phage	45.2	1.2e-65
QBG45712.1|5023877_5024180_-	putative IS protein	NA	NA	NA	NA	NA
QBG45713.1|5024378_5024792_+|transposase	putative transposase	transposase	Q716C2	Shigella_phage	96.5	5.2e-62
QBG45714.1|5024788_5025031_+	IS3 element protein InsF	NA	Q716C2	Shigella_phage	92.4	4.7e-39
QBG45715.1|5025113_5025371_+	hypothetical protein	NA	NA	NA	NA	NA
QBG45716.1|5025927_5026695_-	ferric dicitrate ABC transporter - ATP binding subunit	NA	G3M9Y6	Bacillus_virus	24.8	6.4e-13
QBG45717.1|5026695_5027652_-	ferric dicitrate ABC transporter - membrane subunit	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.1	1.1e-17
>prophage 1
CP036244	Escherichia coli strain S65EC plasmid pS65EC, complete sequence	146792	9281	37076	146792	transposase	Escherichia_phage(36.36%)	31	NA	NA
QBG40881.1|9281_10328_+	ABC transporter ATP-binding protein	NA	F2Y1V5	Organic_Lake_phycodnavirus	26.9	8.4e-08
QBG40882.1|10436_11369_-	Homocysteine S-methyltransferase	NA	NA	NA	NA	NA
QBG40883.1|11355_12783_-	Amino-acid permease RocC	NA	NA	NA	NA	NA
QBG40884.1|13002_13983_+|transposase	transposase	transposase	Q38213	Escherichia_phage	99.4	6.1e-186
QBG40885.1|14210_14528_+	hypothetical protein	NA	NA	NA	NA	NA
QBG40886.1|14477_14852_-	Integrase core domain protein	NA	Q716C2	Shigella_phage	94.3	5.4e-66
QBG40887.1|14814_15174_-	hypothetical protein	NA	A0A077SLM1	Escherichia_phage	98.9	5.0e-45
QBG40888.1|15201_15381_-	hypothetical protein	NA	Q71TH5	Escherichia_phage	96.6	3.5e-23
QBG40889.1|15385_15766_-	Toxin Doc	NA	A0A077SK56	Escherichia_phage	100.0	1.1e-63
QBG40890.1|15765_15987_-	Phd_YefM	NA	A0A222YXU1	Escherichia_phage	100.0	6.7e-32
QBG40891.1|16169_17726_+	HsdM modification protein	NA	A0A2H4PQP4	Staphylococcus_phage	42.7	3.2e-104
QBG40892.1|17722_19006_+	HsdS specificty protein	NA	F2Y1N5	Organic_Lake_phycodnavirus	26.5	2.2e-10
QBG40893.1|19127_22244_+	type I restriction enzyme R subunit	NA	A0A220A398	Liberibacter_phage	24.0	3.7e-27
QBG40894.1|22946_23198_+	Transposase	NA	Q716C1	Shigella_phage	86.4	9.9e-24
QBG40895.1|23215_24367_-	TnpA	NA	W5R8L2	Staphylococcus_phage	35.6	2.0e-42
QBG40896.1|24515_25328_+|transposase	IS2 transposase TnpB	transposase	U5P429	Shigella_phage	93.3	1.9e-148
QBG40897.1|25429_25711_+	hypothetical protein	NA	NA	NA	NA	NA
QBG40898.1|25811_26189_-	InsB	NA	Q71TF0	Escherichia_phage	99.2	1.7e-67
QBG40899.1|26618_27944_+	Mercuric reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	47.8	6.5e-114
QBG40900.1|28269_28815_+	hypothetical protein	NA	NA	NA	NA	NA
QBG40901.1|28787_29294_+	hypothetical protein	NA	NA	NA	NA	NA
QBG40902.1|29290_30082_+	ResD	NA	I3WFA4	Macacine_betaherpesvirus	91.1	4.2e-52
QBG40903.1|30219_30495_-	hypothetical protein	NA	NA	NA	NA	NA
QBG40904.1|30488_31133_-	signal recognition particle protein	NA	A0A222YXS3	Escherichia_phage	43.0	1.9e-39
QBG40905.1|31361_32333_+	ParM	NA	A0A222YXF2	Escherichia_phage	42.6	6.3e-66
QBG40906.1|32337_32730_+	StbB	NA	NA	NA	NA	NA
QBG40907.1|32734_34006_-	translesion synthesis protein B	NA	F1C5A5	Cronobacter_phage	60.5	1.9e-142
QBG40908.1|34005_34443_-	translesion synthesis protein A	NA	A0A1W6JNS2	Morganella_phage	48.4	8.3e-26
QBG40909.1|34439_34688_-	DNA damage-inducible protein I	NA	Q2A098	Sodalis_phage	48.0	1.9e-14
QBG40910.1|35081_36008_+	YccB	NA	NA	NA	NA	NA
QBG40911.1|36392_37076_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.9	5.1e-30
