assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004295685.1_ASM429568v1	AP019368	Silvanigrellales bacterium RF1110005 DNA, complete genome	1	1259328-1263500	1,1,1,2	PILER-CR,CRISPRCasFinder,CRT,PILER-CR	no	cas3f,cas1,cas5f,cas7f,cas6f	DEDDh,cas3,Cas9_archaeal,cas3f,cas1,cas5f,cas7f,cas6f,c2c9_V-U4	Unclear	GTTTCCCGCTGCACAAGCGGTTGAAAGA,GTTTCCCGCTGCACAAGCGGTTGAAAGA,GTTTCCCGCTGCACAAGCGGTTGAAAGA,GTTTCCCGCTGCACAAGCGGTTGAAAGA	28,28,28,28	1	1	1260017-1260048	AP019368.1_1258636-1258667	NA:NA:NA:NA	45,69,69,45	69	Unclear	DEDDh,cas3,Cas9_archaeal,cas3f,cas1,cas5f,cas7f,cas6f,c2c9_V-U4	NA|63aa|up_9|AP019368.1_1247675_1247864_+,NA|55aa|up_8|AP019368.1_1247879_1248044_+,NA|454aa|up_3|AP019368.1_1255083_1256445_+,NA|137aa|down_0|AP019368.1_1264402_1264813_+,NA|136aa|down_1|AP019368.1_1265748_1266156_+,NA|214aa|down_3|AP019368.1_1267762_1268404_-,NA|63aa|down_4|AP019368.1_1268904_1269093_+,NA|143aa|down_5|AP019368.1_1269256_1269685_+	NA|63aa|up_9|AP019368.1_1247675_1247864_+	NA	NA|55aa|up_8|AP019368.1_1247879_1248044_+	NA	NA|260aa|up_7|AP019368.1_1248272_1249052_+	cd09085, Mth212-like_AP-endo, Methanothermobacter thermautotrophicus Mth212-like subfamily of the ExoIII family purinic/apyrimidinic (AP) endonucleases	NA|231aa|up_6|AP019368.1_1249174_1249867_+	cd13629, PBP2_Dsm1740, Amino acid-binding domain of the type 2 periplasmic binding fold superfamily	cas3f|1258aa|up_5|AP019368.1_1250308_1254082_-	TIGR02562, conserved_hypothetical_protein, CRISPR-associated helicase Cas3, subtype I-F/YPEST	cas1|301aa|up_4|AP019368.1_1254078_1254981_-	cd09718, Cas1_I-F, CRISPR/Cas system-associated protein Cas1	NA|454aa|up_3|AP019368.1_1255083_1256445_+	NA	cas5f|301aa|up_2|AP019368.1_1256448_1257351_+	cd09736, Csy2_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy2	cas7f|371aa|up_1|AP019368.1_1257360_1258473_+	cd09737, Csy3_I-F, CRISPR/Cas system-associated RAMP superfamily protein Csy3	cas6f|237aa|up_0|AP019368.1_1258481_1259192_+	cd09739, Cas6_I-F, CRISPR/Cas system-associated RAMP superfamily protein Cas6f	NA|137aa|down_0|AP019368.1_1264402_1264813_+	NA	NA|136aa|down_1|AP019368.1_1265748_1266156_+	NA	NA|440aa|down_2|AP019368.1_1266270_1267590_-	pfam13546, DDE_5, DDE superfamily endonuclease	NA|214aa|down_3|AP019368.1_1267762_1268404_-	NA	NA|63aa|down_4|AP019368.1_1268904_1269093_+	NA	NA|143aa|down_5|AP019368.1_1269256_1269685_+	NA	NA|465aa|down_6|AP019368.1_1269887_1271282_+	pfam07313, DUF1460, Protein of unknown function (DUF1460)	NA|166aa|down_7|AP019368.1_1271287_1271785_-	pfam04461, DUF520, Protein of unknown function (DUF520)	NA|111aa|down_8|AP019368.1_1272013_1272346_+	pfam14114, DUF4286, Domain of unknown function (DUF4286)	NA|112aa|down_9|AP019368.1_1272327_1272663_-	cd03528, Rieske_RO_ferredoxin, Rieske non-heme iron oxygenase (RO) family, Rieske ferredoxin component; composed of the Rieske ferredoxin component of some three-component RO systems including biphenyl dioxygenase (BPDO) and carbazole 1,9a-dioxygenase (CARDO)
GCA_004295685.1_ASM429568v1	AP019368	Silvanigrellales bacterium RF1110005 DNA, complete genome	3	2632454-2632590	3	CRISPRCasFinder	no		DEDDh,cas3,Cas9_archaeal,cas3f,cas1,cas5f,cas7f,cas6f,c2c9_V-U4	Orphan	TTGGGAGCAGAGGGTCGCGAGTTCGAATCCCGCATCCCCGACCAT	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,cas3,Cas9_archaeal,cas3f,cas1,cas5f,cas7f,cas6f,c2c9_V-U4	NA|81aa|up_6|AP019368.1_2624942_2625185_-,NA|55aa|up_5|AP019368.1_2625924_2626089_+,NA|487aa|up_4|AP019368.1_2626164_2627625_+,NA|232aa|up_3|AP019368.1_2627788_2628484_+,NA|171aa|up_2|AP019368.1_2628470_2628983_+,NA|174aa|up_1|AP019368.1_2629294_2629816_-,NA|510aa|down_6|AP019368.1_2640253_2641783_+,NA|379aa|down_8|AP019368.1_2644731_2645868_+,NA|334aa|down_9|AP019368.1_2645942_2646944_+	NA|70aa|up_9|AP019368.1_2621703_2621913_+	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain	NA|561aa|up_8|AP019368.1_2621922_2623605_+	pfam12920, TcdA_TcdB_pore, TcdA/TcdB pore forming domain	NA|432aa|up_7|AP019368.1_2623611_2624907_+	pfam14424, Toxin-deaminase, The BURPS668_1122 family of deaminases	NA|81aa|up_6|AP019368.1_2624942_2625185_-	NA	NA|55aa|up_5|AP019368.1_2625924_2626089_+	NA	NA|487aa|up_4|AP019368.1_2626164_2627625_+	NA	NA|232aa|up_3|AP019368.1_2627788_2628484_+	NA	NA|171aa|up_2|AP019368.1_2628470_2628983_+	NA	NA|174aa|up_1|AP019368.1_2629294_2629816_-	NA	NA|778aa|up_0|AP019368.1_2629979_2632313_-	TIGR01448, recD_rel, helicase, putative, RecD/TraA family	NA|655aa|down_0|AP019368.1_2632623_2634588_-	smart00283, MA, Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer)	NA|372aa|down_1|AP019368.1_2634718_2635834_-	cd11010, S1-P1_nuclease, S1/P1 nucleases and related enzymes	NA|226aa|down_2|AP019368.1_2635862_2636540_+	PRK10903, PRK10903, peptidylprolyl isomerase A	NA|213aa|down_3|AP019368.1_2636505_2637144_-	pfam01205, UPF0029, Uncharacterized protein family UPF0029	NA|357aa|down_4|AP019368.1_2637145_2638216_-	COG2933, COG2933, Predicted SAM-dependent methyltransferase [General function prediction only]	NA|522aa|down_5|AP019368.1_2638212_2639778_-	PRK09367, PRK09367, histidine ammonia-lyase; Provisional	NA|510aa|down_6|AP019368.1_2640253_2641783_+	NA	NA|912aa|down_7|AP019368.1_2641794_2644530_+	cd16022, sulfatase_like, sulfatase	NA|379aa|down_8|AP019368.1_2644731_2645868_+	NA	NA|334aa|down_9|AP019368.1_2645942_2646944_+	NA
GCA_004295685.1_ASM429568v1	AP019370	Silvanigrellales bacterium RF1110005 68K plasmid DNA, complete genome	1	47547-47765	1	CRISPRCasFinder	no			Orphan	AAAGTGAATCACATGTGATTCAC	23	0	0	NA	NA	NA	3	3	Orphan	DEDDh,cas3,Cas9_archaeal,cas3f,cas1,cas5f,cas7f,cas6f,c2c9_V-U4	NA|100aa|up_9|AP019370.1_31609_31909_+,NA|192aa|up_5|AP019370.1_43477_44053_+,NA|119aa|up_2|AP019370.1_46178_46535_+,NA|176aa|up_1|AP019370.1_46582_47110_+,NA|139aa|up_0|AP019370.1_47118_47535_-,NA|111aa|down_0|AP019370.1_47976_48309_+,NA|75aa|down_1|AP019370.1_48423_48648_+,NA|98aa|down_3|AP019370.1_49701_49995_+,NA|178aa|down_4|AP019370.1_49999_50533_+,NA|107aa|down_5|AP019370.1_50534_50855_+,NA|137aa|down_6|AP019370.1_50912_51323_-,NA|61aa|down_7|AP019370.1_51487_51670_-	NA|100aa|up_9|AP019370.1_31609_31909_+	NA	NA|790aa|up_8|AP019370.1_31966_34336_+	pfam10412, TrwB_AAD_bind, Type IV secretion-system coupling protein DNA-binding domain	NA|2536aa|up_7|AP019370.1_34427_42035_+	PRK05667, dnaG, DNA primase; Validated	NA|469aa|up_6|AP019370.1_42045_43452_+	COG0210, UvrD, Superfamily I DNA and RNA helicases [DNA replication, recombination, and repair]	NA|192aa|up_5|AP019370.1_43477_44053_+	NA	NA|247aa|up_4|AP019370.1_44120_44861_+	pfam04471, Mrr_cat, Restriction endonuclease	NA|360aa|up_3|AP019370.1_45066_46146_+	cd10227, ParM_like, Plasmid segregation protein ParM and similar proteins	NA|119aa|up_2|AP019370.1_46178_46535_+	NA	NA|176aa|up_1|AP019370.1_46582_47110_+	NA	NA|139aa|up_0|AP019370.1_47118_47535_-	NA	NA|111aa|down_0|AP019370.1_47976_48309_+	NA	NA|75aa|down_1|AP019370.1_48423_48648_+	NA	NA|277aa|down_2|AP019370.1_48727_49558_+	pfam06067, DUF932, Domain of unknown function (DUF932)	NA|98aa|down_3|AP019370.1_49701_49995_+	NA	NA|178aa|down_4|AP019370.1_49999_50533_+	NA	NA|107aa|down_5|AP019370.1_50534_50855_+	NA	NA|137aa|down_6|AP019370.1_50912_51323_-	NA	NA|61aa|down_7|AP019370.1_51487_51670_-	NA	NA|259aa|down_8|AP019370.1_51756_52533_-	pfam02661, Fic, Fic/DOC family	NA|198aa|down_9|AP019370.1_52529_53123_-	COG3600, GepA, Uncharacterized phage-associated protein [Function unknown]
