The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	1104070	1117253	4794992		Escherichia_phage(50.0%)	12	NA	NA
QBF90388.1|1104070_1104832_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	48.0	3.4e-59
QBF90389.1|1104825_1105452_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.7	5.7e-36
QBF90390.1|1105591_1106731_+	murein hydrolase activator NlpD	NA	D7RWE0	Brochothrix_phage	35.6	1.7e-06
QBF90391.1|1106793_1107786_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	37.6	6.1e-32
QBF90392.1|1107879_1109244_-	GntP family transporter	NA	NA	NA	NA	NA
QBF90393.1|1109332_1110109_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
QBF90394.1|1110113_1110752_-	aldolase	NA	A0A077SK32	Escherichia_phage	75.0	1.4e-82
QBF90395.1|1110748_1112011_-	four-carbon acid sugar kinase family protein	NA	A0A077SLJ7	Escherichia_phage	61.4	1.7e-135
QBF90396.1|1112007_1112916_-	NAD(P)-dependent oxidoreductase	NA	A0A077SLF7	Escherichia_phage	76.5	5.1e-118
QBF90397.1|1113111_1113879_+	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	56.3	7.4e-70
QBF90398.1|1113929_1114586_-	protein-serine/threonine phosphatase	NA	A0A222YWF0	Escherichia_phage	46.3	6.2e-49
QBF90399.1|1114691_1117253_-	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.6	3.0e-30
>prophage 2
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	1720136	1729579	4794992		Enterobacteria_phage(85.71%)	10	NA	NA
QBF90918.1|1720136_1721063_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
QBF90919.1|1721067_1721799_+	ABC transporter permease	NA	NA	NA	NA	NA
QBF90920.1|1721779_1721887_-	protein YohO	NA	NA	NA	NA	NA
QBF90921.1|1721946_1722678_-	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	99.0	2.8e-111
QBF90922.1|1722899_1724585_+	two-component regulatory system sensor histidine kinase BtsS	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
QBF90923.1|1724581_1725301_+	two-component system response regulator BtsR	NA	NA	NA	NA	NA
QBF90924.1|1725347_1725818_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	99.4	5.2e-82
QBF90925.1|1725859_1726321_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	100.0	1.9e-76
QBF90926.1|1726445_1728446_-	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
QBF90927.1|1728442_1729579_-	VWA domain-containing protein	NA	Q9EYF7	Enterobacteria_phage	97.4	5.0e-163
>prophage 3
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	1795719	1859066	4794992	transposase	Stx2-converting_phage(26.67%)	55	NA	NA
QBF90970.1|1795719_1796916_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
QBF90971.1|1797677_1798319_+	uridine kinase	NA	A0A1V0SAA3	Catovirus	36.9	3.2e-34
QBF90972.1|1798410_1798992_+	dCTP deaminase	NA	I4AZP2	Saccharomonospora_phage	42.1	1.3e-31
QBF90973.1|1799013_1800867_+	outer membrane assembly protein AsmA	NA	NA	NA	NA	NA
QBF90974.1|1801318_1804009_-	CBS domain-containing protein	NA	A0A0R6PEZ3	Moraxella_phage	43.5	5.5e-35
QBF90975.1|1804761_1805652_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	40.3	9.6e-45
QBF90976.1|1806830_1807982_-|transposase	IS30-like element IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.6	1.5e-42
QBF90977.1|1807938_1808307_-|transposase	transposase	transposase	NA	NA	NA	NA
QBF90978.1|1809743_1811177_+	capsule assembly Wzi family protein	NA	NA	NA	NA	NA
QBF90979.1|1811322_1812456_+	polysaccharide export protein	NA	NA	NA	NA	NA
QBF90980.1|1812462_1812894_+	protein tyrosine phosphatase	NA	NA	NA	NA	NA
QBF90981.1|1812912_1815084_+	polysaccharide biosynthesis tyrosine autokinase	NA	NA	NA	NA	NA
QBF90982.1|1815943_1816894_+	polysaccharide pyruvyl transferase	NA	NA	NA	NA	NA
QBF90983.1|1816897_1818064_+	polysaccharide biosynthesis protein	NA	NA	NA	NA	NA
QBF90984.1|1818074_1819229_+	glycosyltransferase	NA	NA	NA	NA	NA
QBF90985.1|1819185_1820478_+	O-antigen ligase	NA	NA	NA	NA	NA
QBF90986.1|1820477_1821566_+	glycosyltransferase	NA	NA	NA	NA	NA
QBF90987.1|1821577_1822747_+	glycosyltransferase	NA	NA	NA	NA	NA
QBF90988.1|1822756_1823524_+	glycosyltransferase	NA	NA	NA	NA	NA
QBF90989.1|1823544_1825293_+	pectate lyase superfamily protein	NA	A0A0A8J9B0	Klebsiella_phage	33.0	7.6e-54
QBF90990.1|1825300_1826254_+	hypothetical protein	NA	NA	NA	NA	NA
QBF90991.1|1826472_1827870_+	undecaprenyl-phosphate glucose phosphotransferase	NA	NA	NA	NA	NA
QBF90992.1|1828036_1829443_+	NADP-dependent phosphogluconate dehydrogenase	NA	M4QQM4	Ostreococcus_lucimarinus_virus	28.7	8.0e-38
QBF90993.1|1829670_1831086_+	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	30.6	5.8e-52
QBF90994.1|1831108_1832479_+	phosphomannomutase	NA	A0A127AWJ1	Bacillus_phage	25.6	9.3e-31
QBF90995.1|1832642_1833809_+	UDP-glucose 6-dehydrogenase	NA	A0A1J0FA55	Only_Syngen_Nebraska_virus	53.7	1.8e-112
QBF90996.1|1834600_1835560_+	N-acetyl-alpha-D-glucosaminyl-diphospho-ditrans, octacis-undecaprenol 3-alpha-mannosyltransferase WbdC	NA	NA	NA	NA	NA
QBF90997.1|1835598_1836207_-	bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE	NA	NA	NA	NA	NA
QBF90998.1|1836200_1836977_-	imidazole glycerol phosphate synthase subunit HisF	NA	NA	NA	NA	NA
QBF90999.1|1836958_1837696_-	1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide isomerase	NA	NA	NA	NA	NA
QBF91000.1|1837695_1838286_-	imidazole glycerol phosphate synthase subunit HisH	NA	NA	NA	NA	NA
QBF91001.1|1838285_1839353_-	bifunctional histidinol-phosphatase/imidazoleglycerol-phosphate dehydratase HisB	NA	NA	NA	NA	NA
QBF91002.1|1839352_1840423_-	histidinol-phosphate transaminase	NA	NA	NA	NA	NA
QBF91003.1|1840419_1841724_-	histidinol dehydrogenase	NA	NA	NA	NA	NA
QBF91004.1|1841729_1842629_-	ATP phosphoribosyltransferase	NA	A0A0F7Q4B0	Cellulophaga_phage	94.7	1.8e-11
QBF93650.1|1842774_1842825_-	his operon leader peptide	NA	NA	NA	NA	NA
QBF91005.1|1843108_1843360_+	YoeB-YefM toxin-antitoxin system antitoxin YefM	NA	NA	NA	NA	NA
QBF91006.1|1843356_1843611_+	Txe/YoeB family addiction module toxin	NA	NA	NA	NA	NA
QBF91007.1|1843693_1844518_+	SDR family oxidoreductase	NA	NA	NA	NA	NA
QBF91008.1|1844563_1845493_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBF93651.1|1845707_1845770_+	membrane protein YoeI	NA	NA	NA	NA	NA
QBF91009.1|1845759_1847118_+	APC family permease	NA	NA	NA	NA	NA
QBF91010.1|1847296_1848355_+	YeeE/YedE family protein	NA	NA	NA	NA	NA
QBF91011.1|1848368_1848596_+	hypothetical protein	NA	NA	NA	NA	NA
QBF91012.1|1848638_1850066_-	exodeoxyribonuclease I	NA	NA	NA	NA	NA
QBF91013.1|1850274_1851441_+	serine-type D-Ala-D-Ala carboxypeptidase DacD	NA	B6DZZ7	Stx2-converting_phage	99.0	1.5e-226
QBF91014.1|1851567_1852788_-|transposase	ISL3-like element ISKox3 family transposase	transposase	NA	NA	NA	NA
QBF91015.1|1852883_1853357_+	DNA gyrase inhibitor SbmC	NA	NA	NA	NA	NA
QBF91016.1|1853554_1854613_+	FUSC family protein	NA	NA	NA	NA	NA
QBF91017.1|1854784_1855114_+	DUF496 family protein	NA	NA	NA	NA	NA
QBF93652.1|1855214_1855397_-	ethanolamine utilization protein	NA	NA	NA	NA	NA
QBF91018.1|1855850_1856240_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
QBF91019.1|1856733_1857138_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
QBF91020.1|1857134_1857482_+	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
QBF91021.1|1857530_1859066_+|transposase	IS66-like element ISEc22 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	99.4	3.5e-289
>prophage 4
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	2462808	2529162	4794992	tRNA,tail,head,transposase,lysis	Salmonella_phage(48.39%)	64	NA	NA
QBF91560.1|2462808_2463970_+|transposase	IS3-like element IS3 family transposase	transposase	A0A0P0I4A4	Acinetobacter_phage	40.6	3.1e-51
QBF93680.1|2464278_2464344_+	hypothetical protein	NA	NA	NA	NA	NA
QBF91561.1|2464447_2465038_-	phenylacetic acid degradation protein PaaY	NA	NA	NA	NA	NA
QBF91562.1|2465019_2465970_-	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
QBF91563.1|2466070_2467384_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
QBF91564.1|2467410_2468616_-	3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase	NA	NA	NA	NA	NA
QBF91565.1|2468615_2469038_-	hydroxyphenylacetyl-CoA thioesterase PaaI	NA	NA	NA	NA	NA
QBF91566.1|2469027_2470455_-	3-hydroxyadipyl-CoA dehydrogenase	NA	NA	NA	NA	NA
QBF91567.1|2470456_2471245_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
QBF91568.1|2471244_2472012_-	2,3-dehydroadipyl-CoA hydratase	NA	NA	NA	NA	NA
QBF91569.1|2472008_2473079_-	phenylacetate-CoA oxygenase/reductase subunit PaaK	NA	NA	NA	NA	NA
QBF91570.1|2473086_2473584_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
QBF91571.1|2473598_2474345_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
QBF91572.1|2474353_2474641_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
QBF91573.1|2474652_2475582_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
QBF91574.1|2475866_2477912_+	phenylacetic acid degradation bifunctional protein PaaZ	NA	NA	NA	NA	NA
QBF91575.1|2478159_2480433_+	primary-amine oxidase	NA	NA	NA	NA	NA
QBF91576.1|2480490_2481990_-	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
QBF91577.1|2482225_2483131_+	transcriptional regulator FeaR	NA	NA	NA	NA	NA
QBF93681.1|2483302_2483629_-	DUF1318 domain-containing protein	NA	NA	NA	NA	NA
QBF91578.1|2483636_2483822_-	YnbE family lipoprotein	NA	NA	NA	NA	NA
QBF91579.1|2483818_2486458_-	YdbH family protein	NA	NA	NA	NA	NA
QBF91580.1|2486665_2487655_+	D-lactate dehydrogenase	NA	M1I4S0	Paramecium_bursaria_Chlorella_virus	44.0	1.5e-70
QBF91581.1|2487765_2488188_+	heat shock protein HslJ	NA	NA	NA	NA	NA
QBF91582.1|2488184_2488451_-	DUF333 domain-containing protein	NA	NA	NA	NA	NA
QBF91583.1|2488724_2492249_+	pyruvate:ferredoxin (flavodoxin) oxidoreductase	NA	NA	NA	NA	NA
QBF91584.1|2492615_2493749_+	porin OmpN	NA	Q1MVN1	Enterobacteria_phage	58.5	1.1e-117
QBF91585.1|2493889_2494324_+	universal stress protein UspF	NA	A0A1W6JNV4	Morganella_phage	52.8	1.8e-28
QBF91586.1|2494500_2495436_+|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	97.7	1.1e-144
QBF91587.1|2495564_2496938_-	ATP-dependent RNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	33.1	6.6e-53
QBF91588.1|2497415_2498399_-	zinc transporter ZntB	NA	NA	NA	NA	NA
QBF91589.1|2498853_2502180_-|tail	tail fiber domain-containing protein	tail	A0A2D1UII2	Escherichia_phage	75.2	0.0e+00
QBF91590.1|2502314_2502533_+	hypothetical protein	NA	A0A1J0GT46	Shigella_phage	45.3	1.9e-07
QBF91591.1|2502532_2503468_+	hypothetical protein	NA	Q333E0	Escherichia_virus	64.0	2.7e-114
QBF91592.1|2503468_2508526_-	DUF1983 domain-containing protein	NA	I6R9B3	Salmonella_phage	52.3	1.3e-40
QBF91593.1|2508539_2509070_-|tail	tail assembly protein	tail	H6WRW3	Salmonella_phage	51.2	1.7e-36
QBF91594.1|2509012_2509744_-|tail	phage tail protein	tail	Q5G8W2	Enterobacteria_phage	61.9	2.4e-86
QBF91595.1|2509746_2510451_-|tail	phage minor tail protein L	tail	A0A1V0E5N2	Salmonella_phage	71.2	2.9e-97
QBF91596.1|2510578_2510734_+	transporter	NA	NA	NA	NA	NA
QBF91597.1|2510746_2511097_+	hypothetical protein	NA	NA	NA	NA	NA
QBF91598.1|2511106_2511355_+	hypothetical protein	NA	NA	NA	NA	NA
QBF91599.1|2511534_2511732_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91600.1|2511731_2512085_-|tail	phage tail protein	tail	A0A1V0E5N3	Salmonella_phage	70.4	9.6e-41
QBF91601.1|2512430_2512685_+	hypothetical protein	NA	NA	NA	NA	NA
QBF91602.1|2513013_2515353_-|tail	tail tape measure protein	tail	A0A291AXC6	Shigella_phage	37.2	3.9e-61
QBF91603.1|2515609_2516026_+	hypothetical protein	NA	NA	NA	NA	NA
QBF91604.1|2516069_2516747_-	hypothetical protein	NA	I6R0Q2	Salmonella_phage	40.4	3.7e-41
QBF91605.1|2516801_2517278_-	hypothetical protein	NA	H6WRU1	Salmonella_phage	62.3	2.8e-51
QBF91606.1|2517290_2517677_-	hypothetical protein	NA	A0A1V0E5P4	Salmonella_phage	61.7	2.1e-41
QBF91607.1|2517673_2518147_-	HK97 gp10 family phage protein	NA	H6WRT9	Salmonella_phage	51.3	2.2e-32
QBF91608.1|2518149_2518518_-	hypothetical protein	NA	Q5G8X6	Enterobacteria_phage	50.0	1.4e-29
QBF91609.1|2518510_2518696_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91610.1|2518698_2519085_-	hypothetical protein	NA	A0A1V0E5R0	Salmonella_phage	63.3	1.6e-41
QBF91611.1|2519150_2520203_-	hypothetical protein	NA	A0A1V0E5P6	Salmonella_phage	65.5	1.3e-133
QBF91612.1|2520220_2520649_-	hypothetical protein	NA	G0ZND8	Cronobacter_phage	41.4	4.0e-17
QBF91613.1|2520665_2521949_-	hypothetical protein	NA	A0A1V0E5Q9	Salmonella_phage	54.6	1.4e-116
QBF91614.1|2521939_2522836_-|head	phage head morphogenesis protein	head	H6WRT1	Salmonella_phage	48.4	2.7e-71
QBF91615.1|2522825_2524196_-	DUF1073 domain-containing protein	NA	H6WRT0	Salmonella_phage	58.8	4.3e-145
QBF91616.1|2524274_2525753_-	DNA-packaging protein	NA	G0ZND4	Cronobacter_phage	69.8	1.1e-202
QBF91617.1|2525755_2526241_-	DNA-binding protein	NA	Q716H4	Shigella_phage	38.8	4.4e-20
QBF91618.1|2527088_2527673_-	hypothetical protein	NA	Q76H27	Enterobacteria_phage	44.0	4.1e-20
QBF91619.1|2528010_2528481_-|lysis	lysis protein	lysis	NA	NA	NA	NA
QBF91620.1|2528468_2528960_-	lysozyme	NA	I6R0P2	Salmonella_phage	61.2	4.8e-54
QBF91621.1|2528961_2529162_-	hypothetical protein	NA	A0A1V0E5H9	Salmonella_phage	47.1	4.3e-06
>prophage 5
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	2532471	2549654	4794992		Salmonella_phage(29.41%)	30	NA	NA
QBF91633.1|2532471_2532684_-	hypothetical protein	NA	A0A1P8DTK9	Salmonella_phage	47.8	4.5e-09
QBF91634.1|2532687_2532987_-	RNA-binding protein	NA	I6S5Y4	Salmonella_phage	62.4	1.1e-24
QBF91635.1|2532976_2533246_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91636.1|2533235_2533439_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91637.1|2533435_2534158_-	antitermination protein	NA	A0A0M4RTW7	Salmonella_phage	36.6	1.3e-39
QBF91638.1|2534157_2534340_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91639.1|2534575_2534977_-	RusA family crossover junction endodeoxyribonuclease	NA	F1C5C9	Cronobacter_phage	58.7	4.3e-37
QBF91640.1|2534973_2535579_-	recombination protein NinG	NA	G0ZNC4	Cronobacter_phage	52.6	9.4e-44
QBF91641.1|2535928_2536711_-	DNA cytosine methyltransferase	NA	S4TQH6	Salmonella_virus	62.1	1.7e-85
QBF91642.1|2536707_2537211_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91643.1|2537681_2538221_-	phage N-6-adenine-methyltransferase	NA	H6WCM2	Enterobacteria_phage	94.4	1.0e-102
QBF91644.1|2538231_2538465_-	hypothetical protein	NA	H6WCM1	Enterobacteria_phage	96.1	3.1e-35
QBF91645.1|2538469_2538706_-	cell division protein FtsK	NA	H6WCM0	Enterobacteria_phage	67.9	7.6e-26
QBF91646.1|2538707_2538911_-	hypothetical protein	NA	H6WCL9	Enterobacteria_phage	85.1	5.7e-30
QBF91647.1|2538900_2539095_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91648.1|2539193_2539412_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91649.1|2539511_2540132_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91650.1|2540145_2540478_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91651.1|2540467_2540659_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93682.1|2540649_2540922_-	toxin-antitoxin system toxin subunit	NA	NA	NA	NA	NA
QBF91652.1|2541160_2541385_-	DUF2737 family protein	NA	NA	NA	NA	NA
QBF91653.1|2541399_2541678_-	hypothetical protein	NA	G9L665	Escherichia_phage	35.8	5.1e-05
QBF91654.1|2541694_2542114_-	single-stranded DNA-binding protein	NA	H9C0R6	Aeromonas_phage	48.5	7.0e-22
QBF91655.1|2542113_2542755_-	recombinase	NA	I6RSN3	Salmonella_phage	54.0	2.8e-54
QBF91656.1|2542904_2543195_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91657.1|2543698_2544346_-	helix-turn-helix domain-containing protein	NA	A0A286S2B2	Klebsiella_phage	50.9	2.4e-53
QBF91658.1|2544652_2544907_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
QBF91659.1|2544909_2545962_+	DUF4373 domain-containing protein	NA	A0A2I7QXJ9	Vibrio_phage	42.4	3.9e-45
QBF91660.1|2547101_2548220_+	hypothetical protein	NA	M9QWT5	Shigella_phage	65.4	7.3e-151
QBF91661.1|2548238_2549654_+	replicative DNA helicase	NA	A0A192Y673	Salmonella_phage	57.9	4.6e-142
>prophage 6
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	2750697	2806739	4794992	tRNA,tail,head,integrase,portal,capsid,terminase,holin	Escherichia_phage(44.44%)	64	2758889:2758903	2806841:2806855
QBF91846.1|2750697_2751804_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
QBF91847.1|2751839_2752481_+	lysogenization regulator HflD	NA	NA	NA	NA	NA
QBF91848.1|2752484_2753855_+	adenylosuccinate lyase	NA	A0A2H4UUU6	Bodo_saltans_virus	44.9	1.2e-107
QBF91849.1|2754023_2754695_+	two-component system response regulator PhoP	NA	NA	NA	NA	NA
QBF91850.1|2754694_2756155_+	two-component system sensor histidine kinase PhoQ	NA	NA	NA	NA	NA
QBF91851.1|2756230_2757352_+	cupin domain-containing protein	NA	NA	NA	NA	NA
QBF91852.1|2757400_2758627_-	peptidase T	NA	NA	NA	NA	NA
QBF91853.1|2758876_2760013_+	spermidine/putrescine ABC transporter ATP-binding protein PotA	NA	Q6GZ03	Mycoplasma_phage	39.8	5.5e-29
2758889:2758903	attL	AAAAAATTGAATAAA	NA	NA	NA	NA
QBF91854.1|2759996_2760860_+	spermidine/putrescine ABC transporter permease PotB	NA	Q6GZ02	Mycoplasma_phage	28.7	6.7e-11
QBF91855.1|2761414_2762083_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
QBF91856.1|2762027_2762165_-|capsid	nucleocapsid protein	capsid	NA	NA	NA	NA
QBF91857.1|2762320_2762851_-|tail	tail fiber domain-containing protein	tail	A0A2D1UII2	Escherichia_phage	85.2	2.5e-69
QBF91858.1|2763584_2763956_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93693.1|2764264_2765773_+	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	31.8	3.6e-44
QBF91859.1|2769726_2770326_-	Ail/Lom family protein	NA	H6WZM8	Escherichia_phage	95.0	1.6e-107
QBF91860.1|2770393_2773873_-	host specificity protein J	NA	A0A291AWT4	Escherichia_phage	89.9	0.0e+00
QBF91861.1|2773933_2774542_-|tail	tail assembly protein	tail	A5LH42	Enterobacteria_phage	94.1	1.9e-100
QBF91862.1|2774478_2775222_-|tail	phage tail protein	tail	K7PLW1	Enterobacteria_phage	97.2	4.5e-149
QBF91863.1|2775227_2775926_-|tail	phage minor tail protein L	tail	A0A1B5FP81	Escherichia_phage	97.0	3.4e-130
QBF91864.1|2775925_2776282_-|tail	phage tail protein	tail	A0A0P0ZDL9	Stx2-converting_phage	66.7	2.8e-40
QBF91865.1|2776259_2779487_-|tail	phage tail tape measure protein	tail	A0A1B5FPE2	Escherichia_phage	95.0	0.0e+00
QBF93694.1|2779533_2779794_-	DUF4035 domain-containing protein	NA	A0A1B5FP87	Escherichia_phage	95.3	2.3e-39
QBF91866.1|2779835_2780222_-|tail	phage tail protein	tail	A0A1B5FP91	Escherichia_phage	100.0	8.9e-64
QBF91867.1|2780221_2780926_-|tail	phage tail protein	tail	A0A1B5FP82	Escherichia_phage	92.7	1.4e-112
QBF91868.1|2780986_2781331_-	DUF3168 domain-containing protein	NA	A0A1B5FP84	Escherichia_phage	96.5	5.1e-55
QBF91869.1|2781327_2781777_-	HK97 gp10 family phage protein	NA	S4TR46	Salmonella_phage	81.2	6.1e-64
QBF91870.1|2781773_2782112_-|head,tail	head-tail adaptor protein	head,tail	A0A1B5FP90	Escherichia_phage	90.2	7.5e-51
QBF91871.1|2782120_2782438_-|head,tail	phage gp6-like head-tail connector protein	head,tail	A0A1W6JNZ5	Morganella_phage	49.5	5.3e-22
QBF91872.1|2782514_2783732_-|capsid	phage major capsid protein	capsid	A0A1W6JP20	Morganella_phage	71.6	5.9e-162
QBF91873.1|2784337_2785564_-|portal	phage portal protein	portal	Q8SBI0	Shigella_phage	83.3	3.7e-204
QBF91874.1|2785711_2787469_-|terminase	terminase large subunit	terminase	A0A1B5FP96	Escherichia_phage	99.3	0.0e+00
QBF91875.1|2787468_2787951_-|terminase	phage terminase small subunit P27 family	terminase	A0A1B5FPA0	Escherichia_phage	98.1	8.7e-85
QBF91876.1|2788098_2788449_-	HNH endonuclease	NA	A0A1B5FP94	Escherichia_phage	96.6	8.0e-64
QBF91877.1|2788741_2788882_-	Rz1 lytic protein	NA	U5P461	Shigella_phage	84.6	1.0e-09
QBF91878.1|2788974_2789268_+	increased serum survival lipoprotein Iss	NA	K7PL54	Enterobacteria_phage	90.7	5.9e-44
QBF91879.1|2789358_2789541_-	hypothetical protein	NA	A0A0P0ZE50	Stx2-converting_phage	77.0	2.2e-17
QBF91880.1|2789757_2790291_-	lysozyme	NA	Q08J98	Stx2-converting_phage	93.2	1.5e-98
QBF91881.1|2790354_2790705_-	DUF1327 domain-containing protein	NA	K7PGU6	Enterobacteria_phage	94.0	1.4e-36
QBF91882.1|2790709_2790925_-|holin	holin	holin	A0A2R2Z340	Escherichia_phage	98.6	3.4e-33
QBF91883.1|2791232_2791421_-	DUF1737 domain-containing protein	NA	H6WZJ9	Escherichia_phage	95.2	7.2e-27
QBF91884.1|2791681_2792017_+	anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	74.8	1.4e-44
QBF91885.1|2792087_2792300_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93695.1|2792788_2792875_-	DUF3927 domain-containing protein	NA	NA	NA	NA	NA
QBF91886.1|2793269_2794091_-	antitermination protein	NA	K7P7B9	Enterobacteria_phage	58.2	5.1e-77
QBF91887.1|2794087_2794468_-	RusA family crossover junction endodeoxyribonuclease	NA	V5URS4	Shigella_phage	63.6	1.3e-35
QBF91888.1|2794468_2795527_-	DUF968 domain-containing protein	NA	A0A291AWV9	Escherichia_phage	48.0	7.5e-89
QBF91889.1|2795528_2795807_-	hypothetical protein	NA	A0A077KB22	Edwardsiella_phage	37.1	6.1e-06
QBF91890.1|2795974_2796187_-	type I toxin-antitoxin system Hok family toxin	NA	A0A0U2QV81	Escherichia_phage	96.9	8.9e-26
QBF91891.1|2796389_2796569_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91892.1|2797221_2797404_-	hypothetical protein	NA	A0A2R2Z308	Escherichia_phage	100.0	1.4e-27
QBF91893.1|2797497_2797854_-	hypothetical protein	NA	A0A2R2Z307	Escherichia_phage	99.2	1.8e-58
QBF91894.1|2797911_2798334_-	DUF977 family protein	NA	A0A0U2QQN3	Escherichia_phage	90.6	2.6e-64
QBF91895.1|2798374_2799445_-	phage replisome organizer	NA	A0A088CD36	Shigella_phage	56.6	2.6e-52
QBF91896.1|2799516_2799942_-	Rha family transcriptional regulator	NA	NA	NA	NA	NA
QBF91897.1|2799925_2800168_-	hypothetical protein	NA	H9C161	Pectobacterium_phage	55.8	4.8e-07
QBF93696.1|2800559_2800898_+	peptidase S24	NA	H9C160	Pectobacterium_phage	32.0	2.5e-06
QBF91898.1|2801329_2801530_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91899.1|2801622_2801841_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93697.1|2801805_2802009_-	hypothetical protein	NA	NA	NA	NA	NA
QBF91900.1|2802409_2802598_+	cell division inhibition protein DicB	NA	NA	NA	NA	NA
QBF91901.1|2802594_2802786_+	DUF1482 family protein	NA	NA	NA	NA	NA
QBF91902.1|2802879_2805321_+	exonuclease	NA	V5UQJ3	Shigella_phage	46.9	3.1e-114
QBF91903.1|2805382_2805652_+	excisionase	NA	NA	NA	NA	NA
QBF91904.1|2805620_2806739_+|integrase	integrase	integrase	Q77Z04	Phage_21	44.4	1.6e-84
2806841:2806855	attR	AAAAAATTGAATAAA	NA	NA	NA	NA
>prophage 7
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	3717297	3744628	4794992	plate,transposase	Clostridioides_phage(25.0%)	24	NA	NA
QBF92690.1|3717297_3717795_-|transposase	transposase	transposase	NA	NA	NA	NA
QBF92691.1|3717970_3718720_-	peptidoglycan endopeptidase	NA	A0A1V0DZX6	Clostridioides_phage	38.5	9.0e-20
QBF92692.1|3718929_3719190_+	type II toxin-antitoxin system antitoxin DinJ	NA	NA	NA	NA	NA
QBF92693.1|3719192_3719471_+	type II toxin-antitoxin system mRNA interferase toxin YafQ	NA	NA	NA	NA	NA
QBF92694.1|3719626_3720367_+	murein L,D-transpeptidase	NA	NA	NA	NA	NA
QBF92695.1|3720337_3721105_-	class II glutamine amidotransferase	NA	NA	NA	NA	NA
QBF92696.1|3721310_3721889_-	D-sedoheptulose 7-phosphate isomerase	NA	A0A067XQR2	Caulobacter_phage	32.0	1.1e-14
QBF92697.1|3722128_3724573_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
QBF92698.1|3724615_3725089_-	C-lysozyme inhibitor	NA	NA	NA	NA	NA
QBF92699.1|3725242_3726013_+	2-oxoglutaramate amidase	NA	NA	NA	NA	NA
QBF92700.1|3726053_3727190_-|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
QBF92701.1|3727620_3728013_-	hypothetical protein	NA	NA	NA	NA	NA
QBF92702.1|3727990_3732223_-	RHS repeat protein	NA	A0A2H4JHK7	uncultured_Caudovirales_phage	43.1	6.4e-22
QBF92703.1|3732298_3734440_-	type VI secretion system tip protein VgrG	NA	A0A077K8Q4	Ralstonia_phage	25.0	2.4e-25
QBF92704.1|3734649_3735168_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
QBF92705.1|3735862_3736363_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
QBF92706.1|3736397_3736622_+	hypothetical protein	NA	NA	NA	NA	NA
QBF92707.1|3736672_3738148_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
QBF92708.1|3738154_3738568_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
QBF92709.1|3738571_3740422_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
QBF92710.1|3740385_3741468_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
QBF92711.1|3741492_3742773_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
QBF92712.1|3742769_3743294_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
QBF92713.1|3743296_3744628_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 8
CP036177	Escherichia coli strain WCHEC025970 chromosome, complete genome	4794992	4474848	4572753	4794992	tRNA,tail,protease,capsid,head,integrase,portal,transposase,terminase,plate,holin,lysis	Escherichia_phage(48.08%)	100	4484548:4484583	4581638:4581673
QBF93318.1|4474848_4475949_+|tRNA	tRNA (uridine(54)-C5)-methyltransferase TrmA	tRNA	NA	NA	NA	NA
QBF93319.1|4475988_4476348_-	YijD family membrane protein	NA	NA	NA	NA	NA
QBF93759.1|4476347_4476998_-	HTH-type transcriptional repressor FabR	NA	NA	NA	NA	NA
QBF93320.1|4477328_4478729_+	Si-specific NAD(P)(+) transhydrogenase	NA	NA	NA	NA	NA
QBF93321.1|4478711_4479629_-	DNA-binding transcriptional regulator OxyR	NA	NA	NA	NA	NA
QBF93322.1|4479895_4481269_-	argininosuccinate lyase	NA	NA	NA	NA	NA
QBF93323.1|4481329_4482106_-	acetylglutamate kinase	NA	NA	NA	NA	NA
QBF93324.1|4482113_4483118_-	N-acetyl-gamma-glutamyl-phosphate reductase	NA	NA	NA	NA	NA
QBF93325.1|4483271_4484423_+	acetylornithine deacetylase	NA	NA	NA	NA	NA
4484548:4484583	attL	CCGTAGGCCGGATAAGGCGCTCGCGCCGCATCCGGC	NA	NA	NA	NA
QBF93326.1|4485020_4487672_+	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
QBF93327.1|4487853_4489587_+	phosphoethanolamine transferase CptA	NA	NA	NA	NA	NA
QBF93328.1|4489801_4490653_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBF93329.1|4490639_4490981_-	PTS fructose-like transporter subunit IIB	NA	NA	NA	NA	NA
QBF93330.1|4490982_4491861_-	[formate-C-acetyltransferase]-activating enzyme	NA	NA	NA	NA	NA
QBF93331.1|4491826_4494124_-	formate C-acetyltransferase	NA	A0A1S6UAD4	Serratia_phage	48.1	4.6e-06
QBF93332.1|4494174_4494495_-	PTS fructose-like transporter subunit IIB	NA	NA	NA	NA	NA
QBF93333.1|4494509_4495589_-	PTS fructose transporter subunit EIIC	NA	NA	NA	NA	NA
QBF93334.1|4495897_4498399_+	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	26.9	7.9e-12
QBF93335.1|4498410_4499073_+	fructose-6-phosphate aldolase	NA	A0A0E3F0E2	Synechococcus_phage	34.6	5.5e-29
QBF93336.1|4499083_4500187_+	glycerol dehydrogenase	NA	NA	NA	NA	NA
QBF93337.1|4500461_4501079_+	DUF1287 domain-containing protein	NA	NA	NA	NA	NA
QBF93338.1|4501105_4502011_-	cystine transporter YijE	NA	NA	NA	NA	NA
QBF93339.1|4502103_4504284_-	catalase/peroxidase HPI	NA	NA	NA	NA	NA
QBF93340.1|4504612_4505503_-	methylenetetrahydrofolate reductase	NA	NA	NA	NA	NA
QBF93341.1|4505851_4508284_-	bifunctional aspartate kinase/homoserine dehydrogenase II	NA	NA	NA	NA	NA
QBF93342.1|4508286_4509447_-	cystathionine gamma-synthase	NA	NA	NA	NA	NA
QBF93343.1|4509723_4510041_+	met regulon transcriptional regulator MetJ	NA	NA	NA	NA	NA
QBF93344.1|4510224_4510833_+	YiiX family permuted papain-like enzyme	NA	NA	NA	NA	NA
QBF93345.1|4510893_4511106_-	50S ribosomal protein L31	NA	NA	NA	NA	NA
QBF93346.1|4511308_4513507_+	primosomal protein N'	NA	NA	NA	NA	NA
QBF93347.1|4513662_4514688_+	DNA-binding transcriptional regulator CytR	NA	NA	NA	NA	NA
QBF93348.1|4514779_4515739_+	cell division protein FtsN	NA	NA	NA	NA	NA
QBF93349.1|4515831_4516362_+|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
QBF93350.1|4516371_4517703_+	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.9	1.7e-45
QBF93351.1|4517769_4518696_+	1,4-dihydroxy-2-naphthoate polyprenyltransferase	NA	NA	NA	NA	NA
QBF93352.1|4518788_4519274_+	ribonuclease E activity regulator RraA	NA	NA	NA	NA	NA
QBF93353.1|4519358_4519604_-	septal ring assembly protein ZapB	NA	NA	NA	NA	NA
QBF93354.1|4520028_4520874_+	glycerol uptake facilitator protein GlpF	NA	M1HWZ0	Paramecium_bursaria_Chlorella_virus	28.0	4.4e-15
QBF93355.1|4520896_4522405_+	glycerol kinase	NA	NA	NA	NA	NA
QBF93356.1|4522539_4523550_+	class II fructose-bisphosphatase	NA	NA	NA	NA	NA
QBF93357.1|4523646_4524393_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
QBF93358.1|4524397_4524826_-	universal stress protein UspD	NA	NA	NA	NA	NA
QBF93359.1|4524852_4525152_-	DUF406 domain-containing protein	NA	NA	NA	NA	NA
QBF93360.1|4525363_4525804_-	DUF805 domain-containing protein	NA	NA	NA	NA	NA
QBF93361.1|4525904_4526504_+	DUF1454 family protein	NA	NA	NA	NA	NA
QBF93362.1|4526611_4527379_+	triose-phosphate isomerase	NA	NA	NA	NA	NA
QBF93363.1|4527433_4528189_-	CDP-diacylglycerol diphosphatase	NA	NA	NA	NA	NA
QBF93364.1|4528295_4529285_-	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBF93365.1|4529604_4530567_-	6-phosphofructokinase	NA	NA	NA	NA	NA
QBF93366.1|4530747_4531650_-	cation-efflux pump FieF	NA	NA	NA	NA	NA
QBF93760.1|4531857_4532370_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93367.1|4532643_4534013_-|transposase	IS3-like element IS150 family transposase	transposase	A0A2I6AZV9	Macacine_betaherpesvirus	100.0	1.3e-112
QBF93368.1|4534085_4534340_-	DNA-binding transcriptional regulator	NA	A0A0F7LDQ9	Escherichia_phage	100.0	6.1e-45
QBF93369.1|4534385_4535549_-	phage late control D family protein	NA	U5N3V4	Enterobacteria_phage	99.5	4.8e-206
QBF93370.1|4535548_4536028_-|tail	phage tail protein	tail	A0A0F7LDE8	Escherichia_phage	99.4	1.5e-84
QBF93371.1|4536042_4538490_-|tail	phage tail tape measure protein	tail	M1T2S3	Escherichia_phage	95.2	0.0e+00
QBF93761.1|4538482_4538602_-|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	100.0	1.0e-15
QBF93372.1|4538634_4538910_-|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	98.9	2.2e-40
QBF93373.1|4538966_4539485_-|tail	phage major tail tube protein	tail	A0A0F7LDZ1	Escherichia_phage	100.0	1.4e-93
QBF93374.1|4539497_4540688_-|tail	phage tail sheath protein	tail	A0A0F7LBW9	Escherichia_phage	99.7	3.7e-225
QBF93375.1|4540747_4541350_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	95.3	3.5e-99
QBF93376.1|4541357_4542893_-|transposase	IS66-like element ISEc22 family transposase	transposase	A0A0P0ZEB3	Stx2-converting_phage	99.4	3.5e-289
QBF93377.1|4542941_4543289_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
QBF93378.1|4543285_4543690_-	IS66 family insertion sequence hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
QBF93379.1|4543831_4544347_+|tail	phage tail protein	tail	A0A0F7LCR3	Escherichia_phage	56.8	5.0e-46
QBF93762.1|4544361_4544964_+|tail	tail fiber assembly protein	tail	M1SV83	Escherichia_phage	75.5	2.5e-81
QBF93380.1|4544935_4545352_-|tail	tail fiber assembly protein	tail	B6SCW7	Bacteriophage	46.0	3.4e-21
QBF93381.1|4546646_4547258_-|tail	phage tail protein I	tail	A0A0F7LA36	Escherichia_phage	99.5	1.4e-116
QBF93382.1|4547250_4548159_-|plate	baseplate assembly protein	plate	U5N3T9	Enterobacteria_phage	99.3	3.7e-161
QBF93383.1|4548163_4548511_-|plate	baseplate assembly protein	plate	A0A0F7LDQ1	Escherichia_phage	99.1	3.8e-58
QBF93384.1|4548507_4549143_-|plate	phage baseplate assembly protein V	plate	U5N3F0	Enterobacteria_phage	98.1	2.5e-111
QBF93385.1|4549209_4549662_-	phage virion morphogenesis protein	NA	A0A0F7LDR6	Escherichia_phage	97.3	4.5e-75
QBF93386.1|4549654_4550122_-|tail	phage tail protein	tail	A0A0F7LA33	Escherichia_phage	98.7	3.3e-81
QBF93763.1|4550084_4550258_-|lysis	phage lysis protein	lysis	Q7Y4E1	Escherichia_virus	96.5	2.3e-24
QBF93387.1|4550229_4550655_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A0F7L9Y0	Escherichia_phage	94.3	1.3e-63
QBF93388.1|4550642_4551068_-	protein lysA	NA	A0A0F7LBP4	Escherichia_phage	92.9	3.7e-55
QBF93389.1|4551082_4551580_-	lysozyme	NA	A0A0F7LBS0	Escherichia_phage	99.4	1.5e-92
QBF93390.1|4551579_4551861_-|holin	holin	holin	A0A0F7LA12	Escherichia_phage	100.0	1.3e-43
QBF93391.1|4551864_4552068_-|tail	phage tail protein	tail	A0A0F7LCN2	Escherichia_phage	98.5	2.6e-30
QBF93392.1|4552067_4552577_-|head	head completion/stabilization protein	head	U5N0S3	Enterobacteria_phage	100.0	1.1e-90
QBF93393.1|4552676_4553420_-|terminase	terminase	terminase	Q94MJ2	Enterobacteria_phage	96.4	4.6e-125
QBF93394.1|4553423_4554497_-|capsid	phage major capsid protein, P2 family	capsid	Q94MI3	Enterobacteria_phage	98.9	2.2e-200
QBF93395.1|4554555_4555410_-|capsid	GPO family capsid scaffolding protein	capsid	Q778Z1	Enterobacteria_phage	99.6	1.7e-136
QBF93396.1|4555583_4557356_+|terminase	terminase ATPase subunit family protein	terminase	A0A0F7LCK3	Escherichia_phage	100.0	0.0e+00
QBF93397.1|4557355_4558390_+|portal	phage portal protein	portal	U5N087	Enterobacteria_phage	99.1	1.6e-200
QBF93398.1|4558428_4558641_-	hypothetical protein	NA	M1TAP7	Escherichia_phage	83.0	3.5e-14
QBF93399.1|4558761_4561245_+	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
QBF93764.1|4562562_4563309_-	ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QBF93400.1|4563323_4564865_-|transposase	IS21-like element ISEc12 family transposase	transposase	K4I413	Acidithiobacillus_phage	46.4	1.3e-129
QBF93401.1|4566339_4566615_-	hypothetical protein	NA	A0A0F7LCM4	Escherichia_phage	100.0	2.3e-45
QBF93402.1|4566611_4566836_-	TraR/DksA family transcriptional regulator	NA	A0A0F7LDI3	Escherichia_phage	98.6	3.8e-35
QBF93403.1|4566835_4567138_-	hypothetical protein	NA	A0A0F7LDT6	Escherichia_phage	96.0	2.5e-45
QBF93404.1|4567137_4567362_-	DUF2732 family protein	NA	S4TP68	Salmonella_phage	100.0	4.7e-33
QBF93765.1|4567425_4567926_-	replication protein B	NA	M1SV55	Escherichia_phage	100.0	2.6e-92
QBF93405.1|4568095_4568368_-	hypothetical protein	NA	Q1JS36	Enterobacteria_phage	100.0	1.4e-47
QBF93406.1|4568504_4568798_+	helix-turn-helix domain-containing protein	NA	Q1JS37	Enterobacteria_phage	100.0	2.7e-49
QBF93407.1|4568867_4569848_+|integrase	integrase	integrase	S4TP66	Salmonella_phage	100.0	4.7e-186
QBF93766.1|4570034_4570535_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA	NA
QBF93408.1|4570684_4571383_+	envelope stress response regulator transcription factor CpxR	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
QBF93409.1|4571379_4572753_+	envelope stress sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.9	3.8e-16
4581638:4581673	attR	GCCGGATGCGGCGCGAGCGCCTTATCCGGCCTACGG	NA	NA	NA	NA
>prophage 1
CP036180	Escherichia coli strain WCHEC025970 plasmid p1_025970, complete sequence	109593	1796	52728	109593	transposase,protease,integrase	Escherichia_phage(47.06%)	54	NA	NA
QBF94081.1|1796_2450_+|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QBF94082.1|2542_2800_+	antitoxin PemI	NA	NA	NA	NA	NA
QBF94083.1|2801_3134_+	mRNA interferase PemK	NA	NA	NA	NA	NA
QBF94084.1|4444_5149_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF94085.1|5395_5869_-	trimethoprim-resistant dihydrofolate reductase DfrA14	NA	G3MBI7	Bacillus_virus	28.9	8.4e-16
QBF94196.1|7082_7271_-	hypothetical protein	NA	A0A077SL39	Escherichia_phage	96.7	8.8e-09
QBF94086.1|7340_8540_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
QBF94087.1|8549_8738_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94088.1|9200_9458_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94089.1|9515_10292_-|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.9	6.4e-53
QBF94090.1|10288_11032_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94091.1|11082_11433_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94197.1|11984_13073_+	transcriptional regulator	NA	NA	NA	NA	NA
QBF94092.1|13074_15300_+	phage T7 exclusion protein	NA	NA	NA	NA	NA
QBF94093.1|15349_16249_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94094.1|16238_16529_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94095.1|16709_16883_+	toxin-antitoxin system, antitoxin component, AbrB family protein	NA	NA	NA	NA	NA
QBF94096.1|16824_17055_+	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	NA	NA	NA	NA	NA
QBF94097.1|17051_17468_+	PIN domain-containing protein	NA	NA	NA	NA	NA
QBF94098.1|17629_19768_-	AAA family ATPase	NA	NA	NA	NA	NA
QBF94099.1|20121_20379_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94100.1|20378_20969_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94101.1|21231_22788_+	ATP-binding cassette domain-containing protein	NA	NA	NA	NA	NA
QBF94102.1|22979_23597_+	proQ/FINO family protein	NA	NA	NA	NA	NA
QBF94103.1|23889_24927_-	permease	NA	NA	NA	NA	NA
QBF94104.1|25031_25355_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QBF94105.1|25553_26258_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.1	4.9e-137
QBF94198.1|26287_26992_+	RepB family plasmid replication initiator protein	NA	I3WF20	Macacine_betaherpesvirus	28.7	6.4e-20
QBF94106.1|27036_28287_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94107.1|28386_28626_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94108.1|28602_29199_-	recombinase family protein	NA	E5FFF9	Burkholderia_phage	43.7	7.1e-36
QBF94109.1|29255_29960_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF94110.1|30976_31681_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF94111.1|33577_34582_+|transposase	IS110-like element IS5075 family transposase	transposase	NA	NA	NA	NA
QBF94112.1|34763_34940_-	DUF4102 domain-containing protein	NA	T1S9J3	Salmonella_phage	68.6	1.0e-06
QBF94113.1|35269_36085_+	sulfonamide-resistant dihydropteroate synthase Sul2	NA	A0A0B5J4J5	Pandoravirus	27.6	5.9e-09
QBF94114.1|36145_36949_+	aminoglycoside O-phosphotransferase APH(3'')-Ib	NA	NA	NA	NA	NA
QBF94115.1|36948_37785_+	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
QBF94116.1|38090_38333_+	relaxase	NA	NA	NA	NA	NA
QBF94117.1|38364_39042_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
QBF94118.1|39120_40320_+	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA	NA
QBF94119.1|40586_40892_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QBF94120.1|40919_42134_-	chloramphenicol/florfenicol efflux MFS transporter FloR	NA	S4TR35	Salmonella_phage	28.7	5.5e-19
QBF94121.1|42350_43235_-	DUF3363 domain-containing protein	NA	NA	NA	NA	NA
QBF94122.1|43265_44759_-|transposase	IS91-like element ISVsa3 family transposase	transposase	NA	NA	NA	NA
QBF94123.1|44969_45194_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94124.1|45190_45928_-	resolvase	NA	NA	NA	NA	NA
QBF94125.1|46034_46526_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94126.1|46559_47264_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF94127.1|47823_48381_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
QBF94128.1|48563_49424_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
QBF94129.1|49593_50349_+	16S rRNA (guanine(1405)-N(7))-methyltransferase RmtB1	NA	NA	NA	NA	NA
QBF94130.1|50474_51179_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF94131.1|52023_52728_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
>prophage 1
CP036181	Escherichia coli strain WCHEC025970 plasmid p2_025970, complete sequence	103149	6551	42509	103149	integrase,transposase	Escherichia_phage(30.0%)	51	NA	NA
QBF94215.1|6551_7256_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF94216.1|7201_7414_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94217.1|7658_8867_+	restriction endonuclease	NA	E5E3X4	Burkholderia_phage	42.5	2.1e-34
QBF94218.1|8900_10334_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	50.9	1.4e-106
QBF94320.1|11821_12613_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA22	NA	NA	NA	NA	NA
QBF94219.1|12761_13775_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
QBF94321.1|13743_14028_+|transposase	transposase	transposase	NA	NA	NA	NA
QBF94220.1|14061_14766_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
QBF94221.1|14756_14945_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94222.1|15264_15375_-	hypothetical protein	NA	E4ZFP9	Streptococcus_phage	88.6	1.9e-08
QBF94223.1|15379_16117_-	23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B)	NA	E4ZFQ0	Streptococcus_phage	99.6	6.3e-135
QBF94224.1|16242_16338_-	23S rRNA methyltransferase attenuation leader peptide	NA	NA	NA	NA	NA
QBF94225.1|16472_17177_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
QBF94226.1|17339_17537_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94227.1|17861_18995_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94228.1|19014_19299_+	korC	NA	NA	NA	NA	NA
QBF94229.1|19469_20117_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94230.1|20104_20440_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94231.1|20619_21201_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94232.1|21771_22122_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94233.1|22191_22800_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94234.1|22867_23650_+|integrase	phage integrase family protein	integrase	I3WFA4	Macacine_betaherpesvirus	92.0	5.4e-52
QBF94235.1|23787_24063_-	CopG family transcriptional regulator	NA	NA	NA	NA	NA
QBF94236.1|24056_24701_-	chromosome partitioning protein ParA	NA	A0A222YXS3	Escherichia_phage	42.5	4.3e-39
QBF94237.1|24929_25901_+	plasmid segregation protein parM	NA	A0A222YXF2	Escherichia_phage	42.9	7.4e-67
QBF94238.1|25905_26298_+	plasmid stability protein	NA	NA	NA	NA	NA
QBF94239.1|26302_27574_-	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	60.5	1.9e-142
QBF94240.1|27573_28011_-	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	A0A1W6JNS2	Morganella_phage	48.4	8.3e-26
QBF94241.1|28007_28256_-	protein ImpC	NA	Q2A098	Sodalis_phage	48.0	1.9e-14
QBF94242.1|28366_28636_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94322.1|28673_29576_+	DUF1281 domain-containing protein	NA	NA	NA	NA	NA
QBF94243.1|29960_30644_+	DNA methylase	NA	A0A2I7RE86	Vibrio_phage	36.4	1.1e-29
QBF94244.1|30644_30866_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94245.1|30879_31314_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
QBF94323.1|32670_32973_+	antirestriction protein	NA	NA	NA	NA	NA
QBF94246.1|33019_33442_+	DUF1380 domain-containing protein	NA	NA	NA	NA	NA
QBF94247.1|33438_33630_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94248.1|34195_34402_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94249.1|34398_34926_+	single-stranded DNA-binding protein	NA	I3PGW4	Xanthomonas_phage	73.5	3.5e-47
QBF94250.1|34983_35217_+	DUF905 domain-containing protein	NA	NA	NA	NA	NA
QBF94251.1|35275_37234_+	ParB/RepB/Spo0J family partition protein	NA	G8DH78	Emiliania_huxleyi_virus	27.6	1.1e-21
QBF94252.1|37288_37723_+	conjugation system SOS inhibitor PsiB	NA	NA	NA	NA	NA
QBF94253.1|37719_38439_+	plasmid SOS inhibition protein A	NA	NA	NA	NA	NA
QBF94254.1|38435_39032_+	hypothetical protein	NA	A0A0N7KZV3	Escherichia_phage	47.2	1.8e-15
QBF94255.1|39103_39574_+	DUF1472 domain-containing protein	NA	NA	NA	NA	NA
QBF94256.1|39494_39995_+	antirestriction protein ArdA	NA	G9FHQ1	Rhodococcus_virus	27.3	2.4e-05
QBF94257.1|40134_40434_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94258.1|40455_40701_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94259.1|40723_41158_+	post-segregation killing protein PndC	NA	NA	NA	NA	NA
QBF94260.1|41251_41518_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94261.1|41582_42509_+|transposase	Rpn family recombination-promoting nuclease/putative transposase	transposase	Q2A0A7	Sodalis_phage	53.4	3.5e-66
>prophage 1
CP036178	Escherichia coli strain WCHEC025970 plasmid pCTXM199_025970, complete sequence	238258	108384	133357	238258	transposase	Escherichia_phage(50.0%)	23	NA	NA
QBF93874.1|108384_111390_-|transposase	Tn3-like element Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.9	0.0e+00
QBF93875.1|111553_112111_+	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
QBF93876.1|112293_113154_+	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
QBF93877.1|114039_114816_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
QBF93878.1|114886_115840_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QBF93879.1|115859_116258_-	ester cyclase	NA	NA	NA	NA	NA
QBF93880.1|117089_117794_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
QBF93881.1|117739_117949_-	hypothetical protein	NA	Q1MVP5	Enterobacteria_phage	89.5	8.9e-10
QBF93882.1|117987_118374_+	bleomycin binding protein	NA	NA	NA	NA	NA
QBF93883.1|118693_119086_-	NimC/NimA family protein	NA	NA	NA	NA	NA
QBF93884.1|119420_120125_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
QBF93885.1|120444_121620_+	multidrug efflux RND transporter periplasmic adaptor subunit OqxA	NA	NA	NA	NA	NA
QBF93886.1|121643_124796_+	multidrug efflux RND transporter permease subunit OqxB	NA	NA	NA	NA	NA
QBF93887.1|124865_125345_-	transcriptional regulator	NA	NA	NA	NA	NA
QBF93888.1|125433_126006_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	98.8	1.6e-98
QBF93889.1|126174_126669_-	N-acetyltransferase	NA	NA	NA	NA	NA
QBF93890.1|126669_127224_-	phospholipase D family protein	NA	A0A1B2LRT6	Wolbachia_phage	34.7	3.5e-21
QBF93891.1|128549_129254_+|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF93892.1|129375_130281_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
QBF93893.1|130277_131516_+	MFS transporter	NA	NA	NA	NA	NA
QBF93894.1|131515_132100_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QBF93895.1|132045_132402_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93896.1|132592_133357_-|transposase	IS6-like element IS6100 family transposase	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
>prophage 2
CP036178	Escherichia coli strain WCHEC025970 plasmid pCTXM199_025970, complete sequence	238258	139145	162285	238258	transposase,integrase	Escherichia_phage(36.36%)	29	134434:134448	171782:171796
134434:134448	attL	ACTTGGCATCAGTTC	NA	NA	NA	NA
QBF93907.1|139145_140159_+|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	45.5	1.0e-71
QBF94013.1|140127_140412_+|transposase	transposase	transposase	NA	NA	NA	NA
QBF93908.1|140633_141338_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QBF93909.1|141328_141517_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93910.1|141604_143041_+	glutathione synthase	NA	NA	NA	NA	NA
QBF93911.1|143560_144232_-	RepB family plasmid replication initiator protein	NA	NA	NA	NA	NA
QBF93912.1|144241_144919_-|transposase	IS6 family transposase	transposase	A0A077SL39	Escherichia_phage	99.1	3.6e-129
QBF93913.1|144958_145663_-|transposase	IS6-like element IS26 family transposase	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
QBF93914.1|146016_146373_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93915.1|146522_147140_-	hypothetical protein	NA	NA	NA	NA	NA
QBF94014.1|147353_148838_-	group II intron reverse transcriptase/maturase	NA	A0A0U4J920	Pseudomonas_phage	35.5	1.2e-31
QBF93916.1|148837_149119_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93917.1|149242_149677_+	translesion error-prone DNA polymerase V autoproteolytic subunit	NA	F1C5A6	Cronobacter_phage	48.8	2.5e-22
QBF93918.1|149660_150920_+	translesion error-prone DNA polymerase V subunit UmuC	NA	F1C5A5	Cronobacter_phage	44.3	2.6e-96
QBF93919.1|150965_151775_-	DsbA family protein	NA	NA	NA	NA	NA
QBF93920.1|151881_152493_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93921.1|152552_152975_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93922.1|153008_153401_-	hypothetical protein	NA	NA	NA	NA	NA
QBF93923.1|153425_154175_-	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
QBF93924.1|154322_154862_+	lytic transglycosylase	NA	NA	NA	NA	NA
QBF93925.1|154944_155511_+	hypothetical protein	NA	NA	NA	NA	NA
QBF94015.1|155618_156560_-	HNH endonuclease	NA	A0A1S6KZY3	Salmonella_phage	32.9	4.0e-09
QBF93926.1|156880_157423_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93927.1|157419_157674_+	hypothetical protein	NA	NA	NA	NA	NA
QBF93928.1|157670_157913_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBF93929.1|158049_158382_+	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
QBF93930.1|158428_159304_-	class A extended-spectrum beta-lactamase CTX-M-199	NA	A0A1B0VBP7	Salmonella_phage	90.3	1.1e-138
QBF93931.1|159556_160819_-|transposase	IS1380-like element ISEc9 family transposase	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
QBF93932.1|161304_162285_-|transposase	IS5-like element ISKpn26 family transposase	transposase	A0A077SK28	Escherichia_phage	99.1	2.3e-185
171782:171796	attR	ACTTGGCATCAGTTC	NA	NA	NA	NA
