The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035924	Mycobacteroides abscessus subsp. massiliense strain GD01B chromosome, complete genome	4889373	22471	59614	4889373	integrase,transposase	Gordonia_phage(33.33%)	35	21700:21716	42849:42865
21700:21716	attL	GCTGCTGATCGGTTTGG	NA	NA	NA	NA
QBE85072.1|22471_23860_+|integrase	integrase	integrase	NA	NA	NA	NA
QBE85073.1|24531_25551_+	hypothetical protein	NA	NA	NA	NA	NA
QBE85074.1|25676_27635_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80704.1|27627_28053_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80705.1|28240_29272_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QBE80706.1|29419_29695_+	hypothetical protein	NA	NA	NA	NA	NA
QBE85075.1|29815_31222_+	DUF1254 domain-containing protein	NA	M1IA53	Paramecium_bursaria_Chlorella_virus	39.7	1.3e-80
QBE80707.1|31363_33739_+	arylsulfatase	NA	NA	NA	NA	NA
QBE80708.1|34072_35047_+	nucleotidyltransferase domain-containing protein	NA	NA	NA	NA	NA
QBE80709.1|35057_35531_-	HIT family protein	NA	NA	NA	NA	NA
QBE80710.1|35855_36299_+	hypothetical protein	NA	NA	NA	NA	NA
QBE85076.1|36718_38635_-|integrase	site-specific integrase	integrase	NA	NA	NA	NA
QBE80711.1|38726_39836_-|transposase	transposase	transposase	NA	NA	NA	NA
QBE80712.1|39832_40546_-	hypothetical protein	NA	NA	NA	NA	NA
QBE80713.1|40817_41915_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0U4JD08	Gordonia_phage	31.4	5.9e-28
QBE80714.1|41943_42348_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80715.1|42417_42627_-	hypothetical protein	NA	NA	NA	NA	NA
QBE80716.1|42657_44598_+	heavy metal translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.4	6.2e-65
42849:42865	attR	GCTGCTGATCGGTTTGG	NA	NA	NA	NA
QBE80717.1|44793_46101_-	MFS transporter	NA	NA	NA	NA	NA
QBE80718.1|46052_47153_-	PLP-dependent cysteine synthase family protein	NA	NA	NA	NA	NA
QBE80719.1|47264_47714_-	hypothetical protein	NA	NA	NA	NA	NA
QBE80720.1|47784_48321_-	hypothetical protein	NA	NA	NA	NA	NA
QBE80721.1|48365_48572_-	copper chaperone	NA	NA	NA	NA	NA
QBE80722.1|48758_49247_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80723.1|49341_49641_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80724.1|49808_50210_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80725.1|50688_50949_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBE80726.1|51117_52083_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80727.1|52141_53338_+	ImmA/IrrE family metallo-endopeptidase	NA	A0A0U4JD08	Gordonia_phage	30.0	8.4e-20
QBE80728.1|53360_54569_+|transposase	transposase	transposase	H7BW99	unidentified_phage	28.6	2.0e-05
QBE85077.1|54555_56787_+|transposase	transposase	transposase	NA	NA	NA	NA
QBE80729.1|56779_57208_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80730.1|57311_57491_+	hypothetical protein	NA	NA	NA	NA	NA
QBE80731.1|57563_58808_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QBE80732.1|58807_59614_+|transposase	transposase	transposase	U5N3V8	Enterobacteria_phage	44.2	2.7e-54
>prophage 2
CP035924	Mycobacteroides abscessus subsp. massiliense strain GD01B chromosome, complete genome	4889373	453308	480181	4889373	protease,holin,transposase	Staphylococcus_phage(25.0%)	24	NA	NA
QBE81084.1|453308_454574_+|protease	acid resistance serine protease MarP	protease	NA	NA	NA	NA
QBE81085.1|454547_455510_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
QBE81086.1|455542_456064_-|holin	phage holin family protein	holin	NA	NA	NA	NA
QBE85104.1|456313_457009_+|protease	serine protease	protease	NA	NA	NA	NA
QBE81087.1|457098_459075_-	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	37.3	5.9e-79
QBE81088.1|459258_460878_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QBE81089.1|460874_461846_+	ABC transporter permease	NA	NA	NA	NA	NA
QBE81090.1|461838_462753_+	ABC transporter permease	NA	NA	NA	NA	NA
QBE81091.1|462753_464403_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.8	1.6e-21
QBE81092.1|464427_465171_+	oxidoreductase	NA	NA	NA	NA	NA
QBE81093.1|465586_466468_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
QBE81094.1|466851_467925_+	helicase	NA	NA	NA	NA	NA
QBE81095.1|467921_468983_+	TadA family conjugal transfer-associated ATPase	NA	NA	NA	NA	NA
QBE81096.1|469315_469693_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QBE81097.1|469689_471672_+	cadmium-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	39.8	1.8e-104
QBE81098.1|471746_472010_-	alkylmercury lyase	NA	NA	NA	NA	NA
QBE85105.1|472413_473001_+	DUF1942 domain-containing protein	NA	NA	NA	NA	NA
QBE85106.1|473345_473732_+	BlaI/MecI/CopY family transcriptional regulator	NA	NA	NA	NA	NA
QBE81099.1|473728_474673_+	M56 family peptidase	NA	NA	NA	NA	NA
QBE81100.1|475122_475929_-|transposase	transposase	transposase	U5N3V8	Enterobacteria_phage	44.2	2.7e-54
QBE81101.1|475928_477173_-|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
QBE81102.1|477245_477425_-	hypothetical protein	NA	NA	NA	NA	NA
QBE81103.1|477528_477957_-	hypothetical protein	NA	NA	NA	NA	NA
QBE85107.1|477949_480181_-|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 3
CP035924	Mycobacteroides abscessus subsp. massiliense strain GD01B chromosome, complete genome	4889373	2532682	2542997	4889373	integrase,transposase	Leptospira_phage(100.0%)	9	2522243:2522258	2547329:2547344
2522243:2522258	attL	GGCGGCGTCGAGTGCG	NA	NA	NA	NA
QBE82951.1|2532682_2533720_-|transposase	transposase	transposase	NA	NA	NA	NA
QBE82952.1|2533722_2535774_-|integrase	integrase	integrase	NA	NA	NA	NA
QBE82953.1|2535770_2536526_-|transposase	TnsA-like heteromeric transposase endonuclease subunit	transposase	NA	NA	NA	NA
QBE82954.1|2537119_2538241_+|integrase	site-specific integrase	integrase	S5W9T9	Leptospira_phage	21.0	2.3e-11
QBE82955.1|2538233_2538599_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QBE82956.1|2538576_2540034_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
QBE82957.1|2540110_2540335_-	hypothetical protein	NA	NA	NA	NA	NA
QBE82958.1|2540410_2541673_+|transposase	IS256 family transposase	transposase	NA	NA	NA	NA
QBE82959.1|2541752_2542997_+|transposase	IS21 family transposase	transposase	NA	NA	NA	NA
2547329:2547344	attR	CGCACTCGACGCCGCC	NA	NA	NA	NA
>prophage 4
CP035924	Mycobacteroides abscessus subsp. massiliense strain GD01B chromosome, complete genome	4889373	2829334	2837893	4889373		Streptococcus_phage(16.67%)	7	NA	NA
QBE83219.1|2829334_2830006_-	MBL fold metallo-hydrolase	NA	A0A1X9I5D3	Streptococcus_phage	31.1	4.9e-17
QBE83220.1|2830119_2831043_+	peptidylprolyl isomerase	NA	A0A1V0SCU1	Indivirus	31.6	1.1e-08
QBE83221.1|2831044_2831914_+	class A beta-lactamase	NA	A0A1B0VBP7	Salmonella_phage	46.0	1.5e-55
QBE83222.1|2832015_2834382_-	RelA/SpoT family protein	NA	A0A291L9W9	Bordetella_phage	38.4	1.8e-13
QBE83223.1|2834412_2834946_-	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	36.4	1.1e-14
QBE83224.1|2834942_2836619_-	hypothetical protein	NA	NA	NA	NA	NA
QBE83225.1|2836618_2837893_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	28.6	1.5e-22
>prophage 5
CP035924	Mycobacteroides abscessus subsp. massiliense strain GD01B chromosome, complete genome	4889373	4097822	4107321	4889373		Burkholderia_phage(25.0%)	9	NA	NA
QBE84369.1|4097822_4098947_-	acyltransferase	NA	A9YX16	Burkholderia_phage	28.7	2.7e-20
QBE84370.1|4098943_4100212_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	40.3	3.3e-06
QBE84371.1|4100261_4101068_-	macrocin O-methyltransferase	NA	A0A2R8FDY2	Brazilian_cedratvirus	52.6	4.9e-56
QBE84372.1|4101278_4101971_-	class I SAM-dependent methyltransferase	NA	Q98VI8	Paramecium_bursaria_Chlorella_virus	30.2	3.7e-12
QBE84373.1|4102203_4103337_-	acyltransferase	NA	A9YX16	Burkholderia_phage	26.2	7.0e-16
QBE84374.1|4103504_4104566_-	NAD-dependent epimerase/dehydratase family protein	NA	A0A0E3IB24	Synechococcus_phage	25.8	1.6e-17
QBE84375.1|4104729_4106052_-	glycosyltransferase	NA	A0A1L3KK54	Shahe_endorna-like_virus	39.2	2.2e-05
QBE84376.1|4106131_4106431_-	hypothetical protein	NA	NA	NA	NA	NA
QBE84377.1|4106454_4107321_+	glucose-1-phosphate thymidylyltransferase	NA	H9NC64	Sphingomonas_phage	57.5	2.8e-89
>prophage 6
CP035924	Mycobacteroides abscessus subsp. massiliense strain GD01B chromosome, complete genome	4889373	4795316	4803688	4889373		Mycobacterium_phage(33.33%)	7	NA	NA
QBE84984.1|4795316_4796786_+	class A beta-lactamase-related serine hydrolase	NA	A0A1J0GRK9	Mycobacterium_phage	28.8	4.2e-13
QBE84985.1|4796913_4797726_+	DUF1906 domain-containing protein	NA	A0A2D1GEF2	Gordonia_phage	49.1	3.1e-50
QBE84986.1|4797774_4798971_-	LysM peptidoglycan-binding domain-containing protein	NA	A0A1W6JL93	Lactococcus_phage	47.3	2.6e-05
QBE84987.1|4799400_4800219_+	N-acetylmuramoyl-L-alanine amidase	NA	A0A2D1GEV9	Mycobacterium_phage	55.0	3.3e-68
QBE84988.1|4801009_4801459_+	hypothetical protein	NA	NA	NA	NA	NA
QBE84989.1|4801479_4802931_+	HAMP domain-containing histidine kinase	NA	Q8QKV4	Ectocarpus_siliculosus_virus	33.6	2.9e-06
QBE84990.1|4803010_4803688_-	response regulator transcription factor	NA	W8CYM9	Bacillus_phage	31.4	4.4e-26
