The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP031630	Streptococcus pyogenes strain MGAS28271 chromosome, complete genome	1842830	36552	48865	1842830		Synechococcus_phage(28.57%)	8	NA	NA
QBB39226.1|36552_40278_+	phosphoribosylformylglycinamidine synthase	NA	A6N228	Microbacterium_phage	26.3	1.1e-38
QBB39227.1|40438_41893_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	32.7	2.8e-54
QBB39228.1|41920_42943_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	R9TMC7	Synechococcus_phage	42.1	2.4e-63
QBB39229.1|43110_43665_+	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	35.6	6.8e-25
QBB39230.1|43848_45396_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase	NA	E3SNU8	Prochlorococcus_phage	52.4	3.4e-45
QBB39231.1|45453_46578_-	CHAP domain-containing protein	NA	F8HGP2	Streptococcus_phage	28.6	7.7e-07
QBB40857.1|46830_48096_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
QBB39232.1|48373_48865_+	5-(carboxyamino)imidazole ribonucleotide mutase	NA	A0A2P0VNU7	Tetraselmis_virus	42.3	3.2e-18
>prophage 2
CP031630	Streptococcus pyogenes strain MGAS28271 chromosome, complete genome	1842830	780896	845239	1842830	transposase,tail,head,capsid,holin,portal,integrase,terminase	Streptococcus_pyogenes_phage(70.69%)	76	800867:800926	838823:838918
QBB39869.1|780896_781121_-|transposase	transposase	transposase	NA	NA	NA	NA
QBB39870.1|781440_782700_+	extracellular solute-binding protein	NA	NA	NA	NA	NA
QBB39871.1|782865_784569_+	alpha-glycosidase	NA	NA	NA	NA	NA
QBB39872.1|784594_786730_+	cyclomaltodextrin glucanotransferase	NA	NA	NA	NA	NA
QBB39873.1|786804_788112_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB39874.1|788108_788969_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB39875.1|788990_789806_+	maltodextrose utilization protein malA	NA	NA	NA	NA	NA
QBB39876.1|789921_790722_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
QBB39877.1|790876_791713_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB39878.1|791712_793074_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
QBB39879.1|793347_794595_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
QBB39880.1|794837_795857_+	LacI family transcriptional regulator	NA	C6ZCU4	Enterobacteria_phage	27.8	5.7e-17
QBB39881.1|795972_797466_+	4-alpha-glucanotransferase	NA	NA	NA	NA	NA
QBB39882.1|797500_799765_+	glycogen/starch/alpha-glucan family phosphorylase	NA	Q8B3H5	Iris_mild_mosaic_virus	43.7	1.2e-11
QBB39883.1|800021_800642_-	DUF3862 domain-containing protein	NA	NA	NA	NA	NA
800867:800926	attL	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGA	NA	NA	NA	NA
QBB39884.1|801004_802093_-|integrase	site-specific integrase	integrase	A0A097PAS9	Streptococcus_pyogenes_phage	99.2	4.7e-203
QBB39885.1|802213_803107_-	hypothetical protein	NA	A0A1I9LJQ0	Stx_converting_phage	47.5	1.2e-68
QBB39886.1|803142_803967_-	XRE family transcriptional regulator	NA	A0A097PBE5	Streptococcus_pyogenes_phage	91.6	1.2e-131
QBB39887.1|804323_804482_+	hypothetical protein	NA	A0A097PAP2	Streptococcus_pyogenes_phage	100.0	4.8e-24
QBB39888.1|804511_805111_-	hypothetical protein	NA	A0A097PAT4	Streptococcus_pyogenes_phage	100.0	3.1e-108
QBB39889.1|805164_805374_+	hypothetical protein	NA	A0A097PAQ9	Streptococcus_pyogenes_phage	100.0	1.7e-32
QBB39890.1|805362_805749_-	hypothetical protein	NA	A0A097PAT1	Streptococcus_pyogenes_phage	100.0	1.2e-65
QBB39891.1|805822_806023_+	XRE family transcriptional regulator	NA	A0A141E205	Streptococcus_phage	59.6	2.7e-08
QBB39892.1|806132_806342_-	hypothetical protein	NA	NA	NA	NA	NA
QBB39893.1|806472_806976_-	hypothetical protein	NA	NA	NA	NA	NA
QBB39894.1|807147_807978_+	DnaD domain protein	NA	A0A1S5S918	Streptococcus_phage	54.7	6.4e-67
QBB39895.1|807964_808747_+	DNA replication protein	NA	A0A097PAQ0	Streptococcus_pyogenes_phage	96.9	3.9e-143
QBB39896.1|808887_809241_+	hypothetical protein	NA	A0A097PAU3	Streptococcus_pyogenes_phage	54.0	2.8e-16
QBB39897.1|809221_809476_+	hypothetical protein	NA	Q938N0	Temperate_phage	97.6	1.8e-41
QBB39898.1|809497_809980_+	hypothetical protein	NA	Q938M9	Temperate_phage	99.4	4.1e-50
QBB39899.1|809980_810655_+	single-stranded DNA-binding protein	NA	Q938M8	Temperate_phage	96.9	5.8e-103
QBB39900.1|810647_811073_+	single-stranded DNA-binding protein	NA	A0A097PAQ3	Streptococcus_pyogenes_phage	82.3	2.8e-55
QBB39901.1|811078_811282_+	hypothetical protein	NA	Q938M6	Temperate_phage	100.0	4.7e-32
QBB39902.1|811281_811722_+	RusA family crossover junction endodeoxyribonuclease	NA	A0A097PAS0	Streptococcus_pyogenes_phage	97.9	4.5e-80
QBB39903.1|811718_812075_+	hypothetical protein	NA	A0A097PAU4	Streptococcus_pyogenes_phage	100.0	2.9e-61
QBB39904.1|812071_812317_+	hypothetical protein	NA	A0A097PBE9	Streptococcus_pyogenes_phage	100.0	1.8e-41
QBB39905.1|812316_812553_+	DUF3310 domain-containing protein	NA	A0A097PAQ7	Streptococcus_pyogenes_phage	100.0	2.4e-40
QBB39906.1|812716_813001_+	hypothetical protein	NA	A0A097PAV1	Streptococcus_pyogenes_phage	87.2	8.9e-37
QBB39907.1|813002_813635_+	SAM-dependent DNA methyltransferase	NA	L0P368	Streptococcus_phage	68.6	2.3e-85
QBB39908.1|813637_814162_+	DUF1642 domain-containing protein	NA	J7KK91	Streptococcus_phage	51.1	2.3e-38
QBB39909.1|814158_814425_+	hypothetical protein	NA	NA	NA	NA	NA
QBB39910.1|814710_815145_+	ArpU family transcriptional regulator	NA	J7KDQ1	Streptococcus_phage	94.4	2.2e-71
QBB39911.1|815754_816135_+	hypothetical protein	NA	A0A097PAR5	Streptococcus_pyogenes_phage	100.0	1.0e-64
QBB39912.1|816124_817399_+|terminase	PBSX family phage terminase large subunit	terminase	A0A097PAV9	Streptococcus_pyogenes_phage	100.0	1.1e-251
QBB39913.1|817398_818724_+|portal	phage portal protein	portal	A0A097PAT2	Streptococcus_pyogenes_phage	97.2	1.6e-237
QBB39914.1|818692_819601_+|head	phage head morphogenesis protein	head	A0A097PBF2	Streptococcus_pyogenes_phage	98.2	6.7e-86
QBB39915.1|819607_819877_+	hypothetical protein	NA	Q938K9	Temperate_phage	85.2	5.6e-33
QBB39916.1|820121_820691_+	DUF4355 domain-containing protein	NA	A0A097PAW3	Streptococcus_pyogenes_phage	98.4	8.5e-71
QBB39917.1|820709_821600_+|capsid	phage capsid protein	capsid	A0A097PAW2	Streptococcus_pyogenes_phage	99.4	8.6e-86
QBB39918.1|821612_821906_+	hypothetical protein	NA	A0A097PBF3	Streptococcus_pyogenes_phage	100.0	2.0e-47
QBB39919.1|821919_822264_+	hypothetical protein	NA	A0A097PAS2	Streptococcus_pyogenes_phage	100.0	1.1e-54
QBB39920.1|822260_822572_+	hypothetical protein	NA	A0A097PAW7	Streptococcus_pyogenes_phage	98.1	1.0e-49
QBB39921.1|822568_822964_+	hypothetical protein	NA	A0A097PAT9	Streptococcus_pyogenes_phage	100.0	1.8e-59
QBB39922.1|822965_823376_+	DUF5072 domain-containing protein	NA	A0A097PAW5	Streptococcus_pyogenes_phage	100.0	1.4e-70
QBB39923.1|823387_823894_+|tail	phage major tail protein, TP901-1 family	tail	A0A097PBF4	Streptococcus_pyogenes_phage	100.0	2.6e-79
QBB39924.1|823906_824224_+	hypothetical protein	NA	A0A097PAS6	Streptococcus_pyogenes_phage	100.0	4.9e-52
QBB39925.1|824196_824655_+	hypothetical protein	NA	A0A097PAX1	Streptococcus_pyogenes_phage	100.0	2.3e-82
QBB39926.1|824647_826453_+|tail	phage tail protein	tail	A0A097PAU2	Streptococcus_pyogenes_phage	99.7	8.8e-263
QBB39927.1|826453_827938_+|tail	phage tail protein	tail	A0A097PAW9	Streptococcus_pyogenes_phage	99.8	4.3e-292
QBB39928.1|827938_831379_+	CHAP domain-containing protein	NA	A0A097PBF5	Streptococcus_pyogenes_phage	98.7	0.0e+00
QBB39929.1|831383_833246_+	hypothetical protein	NA	A0A097PAT0	Streptococcus_pyogenes_phage	99.4	0.0e+00
QBB39930.1|833256_833604_+	DUF1366 domain-containing protein	NA	A0A097PAX5	Streptococcus_pyogenes_phage	99.1	6.5e-58
QBB39931.1|833753_834077_+	hypothetical protein	NA	A0A097PAX2	Streptococcus_pyogenes_phage	100.0	7.7e-53
QBB39932.1|834076_834409_+|holin	phage holin	holin	A0A097PBF6	Streptococcus_pyogenes_phage	99.1	7.4e-51
QBB39933.1|834410_835175_+	CHAP domain-containing protein	NA	A0A097PAT3	Streptococcus_pyogenes_phage	98.4	8.0e-149
QBB39934.1|835186_835789_+	hypothetical protein	NA	A0A097PAX9	Streptococcus_pyogenes_phage	98.8	7.8e-91
QBB39935.1|835799_836573_+	hypothetical protein	NA	A0A097PAV0	Streptococcus_pyogenes_phage	100.0	3.9e-135
QBB39936.1|836582_836804_+	hypothetical protein	NA	A0A097PAX7	Streptococcus_pyogenes_phage	84.5	2.5e-18
QBB39937.1|836803_837463_+	hypothetical protein	NA	A0A097PBF7	Streptococcus_pyogenes_phage	100.0	8.5e-123
QBB39938.1|837584_838340_-	exotoxin	NA	A0A097PAT7	Streptococcus_pyogenes_phage	99.6	1.9e-142
QBB39939.1|838559_838748_+	Paratox	NA	J7KIW4	Streptococcus_phage	82.3	3.4e-21
QBB39940.1|839338_839953_+	TVP38/TMEM64 family protein	NA	M1Q152	Streptococcus_phage	52.3	6.2e-51
838823:838918	attR	AACTCATGAACAAGACAAAAAGAAAAAACCTTGATGTAACAAGGTTTTAGTAAGTTATGATTACTTACGGTAAGCATTGATGGAGCTGGTGGGAGT	NA	NA	NA	NA
QBB39941.1|840079_840865_-	ABC transporter permease	NA	NA	NA	NA	NA
QBB39942.1|840874_841573_-	ABC transporter ATP-binding protein	NA	F2Y2R6	Organic_Lake_phycodnavirus	27.3	6.6e-09
QBB39943.1|841572_841944_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
QBB39944.1|842128_845239_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	29.7	5.4e-119
>prophage 3
CP031630	Streptococcus pyogenes strain MGAS28271 chromosome, complete genome	1842830	1192216	1202820	1842830		Streptococcus_phage(57.14%)	9	NA	NA
QBB40268.1|1192216_1193359_-	cysteine desulfurase	NA	A0A1X6WFP1	Pacmanvirus	27.3	1.4e-24
QBB40269.1|1193593_1194034_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40270.1|1194063_1195332_+	bifunctional folylpolyglutamate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
QBB40271.1|1195419_1196772_-	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	24.7	1.0e-29
QBB40272.1|1196993_1197335_-	YlbF/YmcA family competence regulator	NA	A0A1X9I5Y8	Streptococcus_phage	41.1	2.6e-19
QBB40273.1|1197395_1198562_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	32.8	4.5e-34
QBB40274.1|1198655_1199342_-	3-dehydroquinase	NA	W6LP76	Streptococcus_phage	68.9	7.0e-88
QBB40275.1|1199338_1200502_-	class I SAM-dependent rRNA methyltransferase	NA	W6LLI2	Streptococcus_phage	64.9	4.5e-143
QBB40276.1|1200609_1202820_+	LTA synthase family protein	NA	W6LM83	Streptococcus_phage	68.8	2.5e-267
>prophage 4
CP031630	Streptococcus pyogenes strain MGAS28271 chromosome, complete genome	1842830	1480678	1486552	1842830		Streptococcus_phage(100.0%)	8	NA	NA
QBB40521.1|1480678_1481506_+	exodeoxyribonuclease III	NA	M1PSC0	Streptococcus_phage	79.9	1.7e-128
QBB40522.1|1481579_1481936_-	arsenate reductase family protein	NA	M1PLC0	Streptococcus_phage	65.8	6.3e-40
QBB40523.1|1482234_1482864_+	copper homeostasis protein CutC	NA	NA	NA	NA	NA
QBB40524.1|1482910_1483303_-	hypothetical protein	NA	NA	NA	NA	NA
QBB40525.1|1483329_1484193_-	16S rRNA (cytidine(1402)-2'-O)-methyltransferase	NA	M1PLC5	Streptococcus_phage	75.0	1.7e-115
QBB40526.1|1484197_1484521_-	DNA replication initiation control protein YabA	NA	M1PFV3	Streptococcus_phage	59.4	1.3e-28
QBB40527.1|1485023_1485899_-	DNA polymerase III subunit delta'	NA	M1NSC1	Streptococcus_phage	46.6	2.1e-68
QBB40528.1|1485916_1486552_-	thymidylate kinase	NA	M1PSC7	Streptococcus_phage	63.4	2.7e-65
>prophage 5
CP031630	Streptococcus pyogenes strain MGAS28271 chromosome, complete genome	1842830	1749284	1769509	1842830	integrase,holin	Streptococcus_phage(56.25%)	27	1752483:1752503	1766810:1766830
QBB40756.1|1749284_1750505_-	MFS transporter	NA	A0A2H4PQR6	Staphylococcus_phage	23.8	1.6e-05
QBB40920.1|1750515_1752498_-	DNA mismatch repair endonuclease MutL	NA	A0A1B2LRQ5	Wolbachia_phage	30.1	1.3e-62
1752483:1752503	attL	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
QBB40921.1|1752592_1753738_-|integrase	site-specific integrase	integrase	A0A1X9I5Y5	Streptococcus_phage	44.9	3.5e-84
QBB40757.1|1753992_1754136_+|holin	putative holin-like toxin	holin	NA	NA	NA	NA
QBB40758.1|1754997_1755765_-	helix-turn-helix domain-containing protein	NA	Q76TK4	Streptococcus_pyogenes_phage	83.1	3.6e-72
QBB40759.1|1755918_1756125_+	XRE family transcriptional regulator	NA	X2KUC2	Streptococcus_phage	47.0	2.4e-07
QBB40760.1|1756158_1756359_+	XRE family transcriptional regulator	NA	A0A1S5SE31	Streptococcus_phage	56.7	3.4e-11
QBB40761.1|1756379_1756787_+	hypothetical protein	NA	A0A1X9I5V7	Streptococcus_phage	69.4	1.3e-49
QBB40762.1|1757198_1757726_+	hypothetical protein	NA	R9QNB1	Lactococcus_phage	40.2	9.7e-21
QBB40763.1|1757952_1758147_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
QBB40764.1|1758346_1758538_+	CopG family transcriptional regulator	NA	NA	NA	NA	NA
QBB40765.1|1758678_1759131_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40766.1|1759232_1759565_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40922.1|1759564_1759756_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40767.1|1759767_1760097_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40768.1|1760099_1760372_+	hypothetical protein	NA	A0A1X9I5U9	Streptococcus_phage	60.0	3.6e-19
QBB40769.1|1760372_1761239_+	hypothetical protein	NA	A0A1X9I6L2	Streptococcus_phage	73.8	6.1e-121
QBB40770.1|1761250_1762645_+	virulence-associated protein E	NA	A0A1W6JQD6	Staphylococcus_phage	38.1	1.3e-48
QBB40771.1|1762938_1763193_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40772.1|1763189_1763363_+	DUF2758 domain-containing protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	8.6e-11
QBB40773.1|1763543_1764053_+	hypothetical protein	NA	A0A1X9I5U4	Streptococcus_phage	63.5	1.9e-29
QBB40774.1|1764126_1764615_+	hypothetical protein	NA	A0A1X9I5V2	Streptococcus_phage	54.9	1.4e-45
QBB40775.1|1764839_1765022_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40776.1|1765018_1765381_+	DUF1492 domain-containing protein	NA	NA	NA	NA	NA
QBB40777.1|1765355_1765739_+	ArpU family transcriptional regulator	NA	Q938L8	Temperate_phage	41.7	3.7e-14
QBB40778.1|1765903_1766557_+	hypothetical protein	NA	NA	NA	NA	NA
QBB40779.1|1766953_1769509_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.8	6.8e-43
1766810:1766830	attR	CAATAATGTTTGTCATAATTT	NA	NA	NA	NA
>prophage 6
CP031630	Streptococcus pyogenes strain MGAS28271 chromosome, complete genome	1842830	1795919	1805907	1842830	integrase	Streptococcus_phage(75.0%)	15	1795493:1795507	1803055:1803069
1795493:1795507	attL	AATCCTTGAAGCTGT	NA	NA	NA	NA
QBB40814.1|1795919_1796093_-	DUF2758 domain-containing protein	NA	A0A1X9I5U0	Streptococcus_phage	59.6	1.9e-10
QBB40815.1|1796379_1797993_-	phage resistance protein	NA	A0A1P8BMF9	Lactococcus_phage	53.1	2.4e-147
QBB40816.1|1797982_1798504_-	hypothetical protein	NA	NA	NA	NA	NA
QBB40817.1|1798513_1798882_-	hypothetical protein	NA	A0A1X9I6M4	Streptococcus_phage	47.1	2.6e-12
QBB40923.1|1798790_1798982_-	hypothetical protein	NA	NA	NA	NA	NA
QBB40818.1|1798981_1799314_-	hypothetical protein	NA	NA	NA	NA	NA
QBB40819.1|1799325_1799508_-	hypothetical protein	NA	NA	NA	NA	NA
QBB40820.1|1799728_1799998_-	phage antirepressor protein	NA	NA	NA	NA	NA
QBB40821.1|1800027_1800594_-	phage repressor protein	NA	A0A0A7S0G2	Clostridium_phage	42.9	5.0e-23
QBB40822.1|1800609_1800798_-	XRE family transcriptional regulator	NA	A0A1X9I5U7	Streptococcus_phage	59.7	1.7e-12
QBB40823.1|1800966_1801410_+	XRE family transcriptional regulator	NA	A0A1X9I723	Streptococcus_phage	48.6	1.8e-07
QBB40824.1|1801589_1802753_+|integrase	site-specific integrase	integrase	A0A1X9I6A9	Streptococcus_phage	70.5	2.8e-161
QBB40825.1|1802909_1803521_-	30S ribosomal protein S4	NA	NA	NA	NA	NA
1803055:1803069	attR	ACAGCTTCAAGGATT	NA	NA	NA	NA
QBB40826.1|1804250_1804523_-	hypothetical protein	NA	NA	NA	NA	NA
QBB40827.1|1804539_1805907_-	replicative DNA helicase	NA	A0A1P8VVQ6	Streptococcus_phage	63.7	1.0e-154
