The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	939699	988775	5018242	tRNA,protease,tail	Enterobacteria_phage(76.92%)	59	NA	NA
QAY43663.1|939699_943806_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
QAY43664.1|943964_944576_+	Outer-membrane lipoprotein carrier protein	NA	NA	NA	NA	NA
QAY43665.1|944586_945930_+	Replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
QAY43666.1|946020_947313_+|tRNA	Serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	1.5e-94
QAY43667.1|947618_947759_-	hypothetical protein	NA	A0A0A7NPZ4	Enterobacteria_phage	100.0	7.0e-19
QAY43668.1|947950_948211_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43669.1|948253_949363_-	hypothetical protein	NA	A0A0A7NQ97	Enterobacteria_phage	94.6	2.8e-195
QAY43670.1|949520_950705_+|tail	Putative prophage major tail sheath protein	tail	A0A0A7NV69	Enterobacteria_phage	97.2	5.4e-221
QAY43671.1|950704_951217_+	hypothetical protein	NA	A0A0A7NPV8	Enterobacteria_phage	97.1	1.5e-90
QAY43672.1|951272_951647_+	hypothetical protein	NA	A0A0A7NPZ0	Enterobacteria_phage	71.5	5.8e-36
QAY43673.1|951797_954605_+	hypothetical protein	NA	A0A0A7NRZ9	Enterobacteria_phage	90.4	0.0e+00
QAY43674.1|954617_955106_+	hypothetical protein	NA	A0A0A7NV65	Enterobacteria_phage	99.4	1.4e-85
QAY43675.1|955132_955732_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	86.3	2.0e-86
QAY43676.1|955746_956316_+	hypothetical protein	NA	K7P7Q7	Enterobacteria_phage	43.7	1.7e-23
QAY43677.1|956315_956930_+|tail	Prophage tail fiber assembly protein TfaE	tail	Q9MCR5	Enterobacteria_phage	62.1	3.5e-62
QAY43678.1|956936_958709_-	hypothetical protein	NA	M1TAS6	Escherichia_phage	41.1	4.8e-96
QAY43679.1|958705_959314_-	hypothetical protein	NA	A0A0F7LA36	Escherichia_phage	74.4	1.0e-85
QAY43680.1|959306_960203_-	hypothetical protein	NA	A0A0A7NPY5	Enterobacteria_phage	98.0	5.1e-155
QAY43681.1|960206_960557_-	hypothetical protein	NA	A0A0A7NQ90	Enterobacteria_phage	99.1	6.0e-59
QAY43682.1|960553_961135_-	hypothetical protein	NA	A0A0A7NRZ3	Enterobacteria_phage	98.4	2.5e-102
QAY43683.1|961131_961776_-	hypothetical protein	NA	A0A0A7NV60	Enterobacteria_phage	100.0	1.1e-114
QAY43684.1|961759_962227_-	hypothetical protein	NA	A0A0A7NPU6	Enterobacteria_phage	95.5	2.7e-83
QAY43685.1|962250_964128_-	putative 9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	H6WZJ9	Escherichia_phage	82.2	3.0e-306
QAY43686.1|964266_964662_-	hypothetical protein	NA	A0A0A7NPY2	Enterobacteria_phage	93.3	1.0e-59
QAY43687.1|964658_965051_-	hypothetical protein	NA	A0A0A7NQ86	Enterobacteria_phage	96.9	1.9e-69
QAY43688.1|965047_965371_-	hypothetical protein	NA	A0A0A7NRY9	Enterobacteria_phage	93.5	1.7e-47
QAY43689.1|965373_965574_-	hypothetical protein	NA	A0A0A7NV57	Enterobacteria_phage	100.0	3.5e-32
QAY43690.1|965573_966068_-	hypothetical protein	NA	A0A0A7NPU2	Enterobacteria_phage	97.6	5.1e-88
QAY43691.1|966169_966970_-	hypothetical protein	NA	A0A0A7NPX9	Enterobacteria_phage	96.6	3.3e-137
QAY43692.1|967015_968068_-	hypothetical protein	NA	A0A0A7NQ82	Enterobacteria_phage	94.6	7.5e-190
QAY43693.1|968091_968928_-	hypothetical protein	NA	A0A0A7NRY7	Enterobacteria_phage	98.9	1.5e-148
QAY43694.1|969082_970834_+	hypothetical protein	NA	A0A0A7NV54	Enterobacteria_phage	98.3	0.0e+00
QAY43695.1|970833_971880_+	hypothetical protein	NA	A0A0A7NPT9	Enterobacteria_phage	99.7	2.2e-202
QAY43696.1|971894_972419_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43697.1|973005_973269_-	hypothetical protein	NA	A0A2P0P958	Salmonella_phage	73.6	6.7e-31
QAY43698.1|973270_973711_-	hypothetical protein	NA	A0A2I6PID2	Escherichia_phage	50.3	1.5e-19
QAY43699.1|973712_974027_-	hypothetical protein	NA	A0A0A7NRY2	Enterobacteria_phage	94.2	5.5e-48
QAY43700.1|974023_974356_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	A0A0A7NV51	Enterobacteria_phage	96.4	5.5e-54
QAY43701.1|974419_974731_-	hypothetical protein	NA	A0A0A7NPT5	Enterobacteria_phage	95.1	4.2e-48
QAY43702.1|974735_975695_-	Plasmid segregation protein ParM	NA	A0A0A7NPX4	Enterobacteria_phage	99.7	9.9e-181
QAY43703.1|975771_978594_-	hypothetical protein	NA	A0A0A7NQ77	Enterobacteria_phage	97.1	0.0e+00
QAY43704.1|978600_978966_-	hypothetical protein	NA	A0A0A7NRY1	Enterobacteria_phage	96.7	1.9e-60
QAY43705.1|978962_979583_-	hypothetical protein	NA	S5MQL6	Escherichia_phage	39.0	3.5e-09
QAY43706.1|979636_980467_-	hypothetical protein	NA	A0A0A7NPW9	Enterobacteria_phage	99.3	7.4e-132
QAY43707.1|980463_980667_-	hypothetical protein	NA	A0A0A7NQ74	Enterobacteria_phage	97.0	2.4e-28
QAY43708.1|980663_980882_-	hypothetical protein	NA	A0A0A7NRX6	Enterobacteria_phage	63.8	5.2e-13
QAY43709.1|980878_981082_-	hypothetical protein	NA	A0A0A7NPS8	Enterobacteria_phage	82.1	5.5e-25
QAY43710.1|981105_981516_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43711.1|981584_981722_-	hypothetical protein	NA	A0A0A7NPW7	Enterobacteria_phage	100.0	1.9e-08
QAY43712.1|981718_981961_-	hypothetical protein	NA	A0A0A7NQ71	Enterobacteria_phage	100.0	2.3e-38
QAY43713.1|981972_982251_-	hypothetical protein	NA	A0A0A7NRX5	Enterobacteria_phage	79.3	3.1e-34
QAY43714.1|982261_982612_-	hypothetical protein	NA	A0A0A7NV42	Enterobacteria_phage	94.0	2.8e-56
QAY43715.1|982749_982941_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43716.1|982947_983370_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43717.1|983374_983896_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43718.1|983999_984341_+	hypothetical protein	NA	Q1JS21	Enterobacteria_phage	47.1	2.5e-17
QAY43719.1|984410_985403_+	Tyrosine recombinase XerD	NA	A0A0F7LBR0	Escherichia_phage	56.5	2.0e-104
QAY43720.1|985702_988147_+	Dimethyl sulfoxide reductase DmsA	NA	A0A077SK27	Escherichia_phage	49.8	6.6e-221
QAY43721.1|988157_988775_+	Anaerobic dimethyl sulfoxide reductase chain B	NA	A0A077SL61	Escherichia_phage	60.6	5.0e-77
>prophage 2
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	999173	1038675	5018242	tail	Burkholderia_virus(45.0%)	57	NA	NA
QAY43730.1|999173_1000262_+	Phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	46.8	2.7e-81
QAY43731.1|1000332_1001616_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
QAY43732.1|1001871_1002444_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	85.2	4.6e-85
QAY43733.1|1002515_1002977_+	hypothetical protein	NA	A0A0F7LCR3	Escherichia_phage	50.0	3.9e-34
QAY43734.1|1002983_1003598_-|tail	Prophage tail fiber assembly protein TfaE	tail	Q9MCR5	Enterobacteria_phage	60.5	2.5e-60
QAY43735.1|1003597_1004080_-	hypothetical protein	NA	K7P7Q7	Enterobacteria_phage	44.7	7.5e-28
QAY43736.1|1004120_1005368_-	hypothetical protein	NA	A0A0K2FIZ6	Escherichia_phage	43.7	2.0e-40
QAY43737.1|1005370_1005949_-	hypothetical protein	NA	A4JWL7	Burkholderia_virus	66.8	1.7e-66
QAY43738.1|1005941_1007045_-	hypothetical protein	NA	Q6QI99	Burkholderia_phage	55.2	1.4e-106
QAY43739.1|1007035_1007383_-	hypothetical protein	NA	Q6QIA0	Burkholderia_phage	62.4	5.9e-35
QAY43740.1|1007437_1008034_-	hypothetical protein	NA	A4JWL4	Burkholderia_virus	45.2	3.2e-36
QAY43741.1|1008030_1009185_-	hypothetical protein	NA	Q6QIA2	Burkholderia_phage	47.6	1.9e-85
QAY43742.1|1009172_1009385_-	hypothetical protein	NA	Q6QIA3	Burkholderia_phage	57.1	1.2e-17
QAY43743.1|1009384_1010269_-	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.9	6.8e-51
QAY43744.1|1010268_1013220_-	hypothetical protein	NA	A4JWL0	Burkholderia_virus	29.9	9.8e-86
QAY43745.1|1013377_1013713_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43746.1|1013810_1014092_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43747.1|1014094_1014616_-	hypothetical protein	NA	A4JWK6	Burkholderia_virus	67.6	1.8e-67
QAY43748.1|1014615_1016043_-|tail	Putative prophage major tail sheath protein	tail	A4JWK5	Burkholderia_virus	76.3	4.5e-214
QAY43749.1|1016032_1016284_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43750.1|1016283_1016748_-	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
QAY43751.1|1016747_1017194_-	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
QAY43752.1|1017195_1017534_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43753.1|1017543_1018497_-	hypothetical protein	NA	A4JWK0	Burkholderia_virus	43.8	3.4e-64
QAY43754.1|1018511_1019627_-	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.6	9.4e-98
QAY43755.1|1019841_1020300_-	hypothetical protein	NA	Q6QIB8	Burkholderia_phage	44.8	2.6e-30
QAY43756.1|1020302_1021124_-	hypothetical protein	NA	A4JWJ6	Burkholderia_virus	61.9	1.8e-98
QAY43757.1|1021104_1022601_-	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.0	9.7e-167
QAY43758.1|1022600_1024196_-	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.8	6.5e-185
QAY43759.1|1024192_1024738_-	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
QAY43760.1|1024737_1025049_-	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
QAY43761.1|1025048_1025375_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	48.6	1.1e-17
QAY43762.1|1025371_1026022_-	hypothetical protein	NA	J9SVN7	Pseudomonas_phage	32.9	2.8e-09
QAY43763.1|1026005_1026713_-	Membrane-bound lytic murein transglycosylase F	NA	Q5ZQZ1	Pseudomonas_phage	58.2	3.1e-62
QAY43764.1|1026748_1027099_-	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	1.5e-22
QAY43765.1|1027229_1027958_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43766.1|1027933_1028335_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43767.1|1028336_1028552_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43768.1|1028742_1029507_+	Modification methylase DpnIIA	NA	A2I2Y7	Vibrio_virus	64.4	5.2e-100
QAY43769.1|1029623_1029980_-	HTH-type transcriptional regulator ImmR	NA	NA	NA	NA	NA
QAY43770.1|1030073_1030262_+	hypothetical protein	NA	Q5ZQZ9	Pseudomonas_phage	71.0	3.9e-17
QAY43771.1|1030314_1030623_+	hypothetical protein	NA	Q5ZR02	Pseudomonas_phage	55.9	2.7e-23
QAY43772.1|1030633_1031554_+	hypothetical protein	NA	A4JWN3	Burkholderia_virus	56.2	1.6e-74
QAY43773.1|1031553_1031871_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43774.1|1031886_1033656_+	hypothetical protein	NA	A4JWN2	Burkholderia_virus	69.4	1.5e-227
QAY43775.1|1033666_1034833_+	hypothetical protein	NA	A4JWN1	Burkholderia_virus	59.4	2.2e-121
QAY43776.1|1034835_1035105_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43777.1|1035132_1035663_+	hypothetical protein	NA	L7P7T1	Pseudomonas_phage	66.7	1.2e-58
QAY43778.1|1035760_1035955_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43779.1|1035951_1036224_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43780.1|1036233_1036530_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43781.1|1036544_1036760_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43782.1|1036756_1037440_+	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	36.1	1.1e-32
QAY43783.1|1037436_1037667_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43784.1|1037656_1037863_+	hypothetical protein	NA	NA	NA	NA	NA
QAY43785.1|1037864_1038314_+	hypothetical protein	NA	A4JWM5	Burkholderia_virus	45.1	6.1e-24
QAY43786.1|1038285_1038675_+	hypothetical protein	NA	Q6QIE8	Burkholderia_phage	54.2	1.5e-31
>prophage 3
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	1253233	1263599	5018242		Enterobacteria_phage(50.0%)	15	NA	NA
QAY43990.1|1253233_1254484_+	Isocitrate dehydrogenase [NADP]	NA	Q77Z09	Phage_21	100.0	3.8e-23
QAY43991.1|1254597_1255740_-	hypothetical protein	NA	Q77Z02	Phage_21	100.0	3.6e-206
QAY43992.1|1255729_1255966_-	hypothetical protein	NA	NA	NA	NA	NA
QAY43993.1|1256105_1256345_-	hypothetical protein	NA	M1FPC8	Enterobacteria_phage	96.2	4.7e-39
QAY43994.1|1256328_1256655_-	hypothetical protein	NA	A5VWB6	Enterobacteria_phage	95.7	9.8e-48
QAY43995.1|1257430_1257613_-	hypothetical protein	NA	A0A1U8QQC1	Enterobacteria_phage	98.3	1.8e-27
QAY43996.1|1257609_1258290_-	hypothetical protein	NA	A0A0P0ZCD4	Stx2-converting_phage	100.0	1.6e-132
QAY43997.1|1258286_1259072_-	hypothetical protein	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
QAY43998.1|1259077_1259374_-	hypothetical protein	NA	A0A1I9LJN1	Stx_converting_phage	98.0	8.9e-48
QAY43999.1|1259449_1259656_-	Killing protein KilR	NA	K7P6H3	Enterobacteria_phage	85.3	3.2e-28
QAY44000.1|1260251_1261007_-	HTH-type transcriptional regulator PrtR	NA	Q76H56	Enterobacteria_phage	75.0	1.4e-92
QAY44001.1|1261045_1261276_+	hypothetical protein	NA	A0A2H4FNF3	Salmonella_phage	68.0	1.5e-21
QAY44002.1|1261345_1261885_+	hypothetical protein	NA	K7PJT7	Enterobacteria_phage	67.0	2.6e-61
QAY44003.1|1261896_1262901_+	hypothetical protein	NA	A0A0M5M7Y1	Salmonella_phage	64.1	8.7e-111
QAY44004.1|1262897_1263599_+	hypothetical protein	NA	M1FJ72	Enterobacteria_phage	97.0	1.5e-125
>prophage 4
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	1269640	1296485	5018242		Enterobacteria_phage(60.61%)	34	NA	NA
QAY44006.1|1269640_1270096_+	hypothetical protein	NA	I6PD71	Cronobacter_phage	66.9	1.6e-59
QAY44007.1|1270095_1270266_+	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	69.8	2.4e-13
QAY44008.1|1270258_1270549_+	hypothetical protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
QAY44009.1|1270545_1270908_+	Crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	95.7	1.6e-59
QAY44010.1|1270907_1271045_+	hypothetical protein	NA	K7PHH3	Enterobacteria_phage	69.8	1.4e-08
QAY44011.1|1271041_1271731_+	hypothetical protein	NA	I6PDF8	Cronobacter_phage	48.5	4.9e-57
QAY44012.1|1272052_1272358_+	hypothetical protein	NA	A0A286N2Q5	Klebsiella_phage	87.6	7.0e-40
QAY44013.1|1272344_1272821_+	hypothetical protein	NA	K7PKV2	Enterobacteria_phage	94.9	7.3e-84
QAY44014.1|1272817_1273279_+	hypothetical protein	NA	A0A0K2FJD0	Enterobacteria_phage	97.4	2.7e-75
QAY44015.1|1273310_1273604_-	hypothetical protein	NA	K7PL54	Enterobacteria_phage	92.8	7.0e-45
QAY44016.1|1274084_1274411_+	hypothetical protein	NA	H6WZK5	Escherichia_phage	72.2	3.7e-39
QAY44017.1|1274533_1274887_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44018.1|1275363_1275909_+	hypothetical protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	6.8e-94
QAY44019.1|1275883_1277809_+	hypothetical protein	NA	A0A0K2FJ14	Enterobacteria_phage	99.1	0.0e+00
QAY44020.1|1277805_1278012_+	hypothetical protein	NA	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
QAY44021.1|1278008_1279610_+	hypothetical protein	NA	A0A0K2FJC0	Enterobacteria_phage	98.9	1.4e-309
QAY44022.1|1279590_1280910_+	Putative signal peptide peptidase SppA	NA	A0A2I6TC87	Escherichia_phage	97.7	1.1e-230
QAY44023.1|1280919_1281252_+	hypothetical protein	NA	A0A2R9YJN3	Escherichia_phage	99.1	3.8e-55
QAY44024.1|1281307_1282333_+	hypothetical protein	NA	C6ZCY2	Enterobacteria_phage	99.4	7.8e-192
QAY44025.1|1282374_1282773_+	hypothetical protein	NA	A0A0K2FIR1	Enterobacteria_phage	98.5	1.0e-62
QAY44026.1|1282784_1283138_+	hypothetical protein	NA	A0A2R9YJJ5	Escherichia_phage	98.3	2.2e-61
QAY44027.1|1283149_1283728_+	hypothetical protein	NA	A0A2R9YJK4	Escherichia_phage	92.7	5.9e-80
QAY44028.1|1283724_1284120_+	hypothetical protein	NA	A0A2R9YJI2	Escherichia_phage	98.5	2.9e-70
QAY44029.1|1284127_1284868_+	hypothetical protein	NA	A0A2I6TC77	Escherichia_phage	98.0	1.6e-130
QAY44030.1|1284883_1285306_+	hypothetical protein	NA	A0A0K2FIQ8	Enterobacteria_phage	94.3	2.2e-68
QAY44031.1|1285287_1285722_+	hypothetical protein	NA	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
QAY44032.1|1285714_1288276_+	hypothetical protein	NA	A0A0K2FI43	Enterobacteria_phage	98.4	0.0e+00
QAY44033.1|1288272_1288602_+	hypothetical protein	NA	A0A0K2FIE9	Enterobacteria_phage	99.1	2.8e-58
QAY44034.1|1288601_1289300_+	hypothetical protein	NA	A0A0K2FJ01	Enterobacteria_phage	99.6	5.1e-134
QAY44035.1|1289448_1290048_+	hypothetical protein	NA	K7PLW1	Enterobacteria_phage	97.5	1.5e-118
QAY44036.1|1290044_1290587_+	hypothetical protein	NA	A0A291AWV5	Escherichia_phage	84.1	1.3e-76
QAY44037.1|1290647_1294130_+	hypothetical protein	NA	A0A291AWT4	Escherichia_phage	90.3	0.0e+00
QAY44038.1|1294188_1296210_+	hypothetical protein	NA	A0A0E3M0V5	Enterobacteria_phage	72.3	7.2e-181
QAY44039.1|1296206_1296485_+	hypothetical protein	NA	A0A0E3JSQ1	Enterobacteria_phage	55.4	9.9e-25
>prophage 5
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	1438407	1494577	5018242		Enterobacteria_phage(27.45%)	65	NA	NA
QAY44189.1|1438407_1440879_-	Exodeoxyribonuclease 8	NA	A0A192Y6E0	Salmonella_phage	56.0	5.7e-55
QAY44190.1|1440971_1441163_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44191.1|1441159_1441348_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44192.1|1441913_1442132_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44193.1|1442161_1442290_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44194.1|1442291_1442528_-	hypothetical protein	NA	M4QQ57	Salicola_phage	51.1	1.4e-06
QAY44195.1|1442719_1443436_-	putative HTH-type transcriptional regulator	NA	H9C160	Pectobacterium_phage	42.0	1.7e-52
QAY44196.1|1443485_1443701_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44197.1|1443697_1444123_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44198.1|1444220_1445108_+	hypothetical protein	NA	S5FM81	Shigella_phage	55.7	7.3e-61
QAY44199.1|1445114_1445861_+	DNA replication protein DnaC	NA	A0A088CBP4	Shigella_phage	83.8	4.0e-113
QAY44200.1|1445882_1446653_+	hypothetical protein	NA	A0A0U2SAW4	Escherichia_phage	64.5	1.6e-80
QAY44201.1|1446668_1447094_+	hypothetical protein	NA	A0A0U2QQN3	Escherichia_phage	94.0	2.2e-63
QAY44202.1|1447268_1447934_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44203.1|1448114_1448327_+	hypothetical protein	NA	A0A0U2QV81	Escherichia_phage	90.0	5.2e-26
QAY44204.1|1448768_1449824_+	hypothetical protein	NA	A0A291AWV9	Escherichia_phage	48.4	4.0e-90
QAY44205.1|1449824_1450205_+	Crossover junction endodeoxyribonuclease RusA	NA	V5URS4	Shigella_phage	64.5	2.9e-35
QAY44206.1|1450201_1451023_+	Chaperone protein DnaJ	NA	K7P7B9	Enterobacteria_phage	60.1	1.7e-80
QAY44207.1|1451249_1451447_+	hypothetical protein	NA	Q9MC00	Enterobacteria_phage	98.5	6.1e-29
QAY44208.1|1451598_1452648_+	Modification methylase DpnIIB	NA	A0A0N7KZF8	Stx2-converting_phage	95.4	4.4e-198
QAY44209.1|1453861_1454197_-	Anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	74.8	5.2e-44
QAY44210.1|1454457_1456311_+	putative 9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	Q08JA2	Stx2-converting_phage	90.3	0.0e+00
QAY44211.1|1456461_1456677_+	hypothetical protein	NA	G9L6J5	Escherichia_phage	100.0	9.0e-34
QAY44212.1|1456681_1457026_+	hypothetical protein	NA	K7PGU6	Enterobacteria_phage	95.2	2.8e-37
QAY44213.1|1456991_1457264_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44214.1|1457369_1457903_+	Lysozyme RrrD	NA	Q6H9V6	Enterobacteria_phage	95.5	4.8e-100
QAY44215.1|1458195_1458327_+	hypothetical protein	NA	A0A0P0ZG36	Escherichia_phage	74.4	7.5e-07
QAY44216.1|1458545_1459040_+	hypothetical protein	NA	Q9ZXB6	Enterobacteria_phage	87.7	1.7e-72
QAY44217.1|1459036_1459252_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44218.1|1459450_1459651_-	hypothetical protein	NA	H6WZK6	Escherichia_phage	98.5	4.3e-30
QAY44219.1|1459692_1460058_+	hypothetical protein	NA	B6ETE5	Enterobacteria_phage	93.4	2.5e-60
QAY44220.1|1460349_1460913_+	hypothetical protein	NA	A0A0P0ZD56	Stx2-converting_phage	92.0	1.6e-82
QAY44221.1|1460909_1462571_+	hypothetical protein	NA	B6DZ98	Enterobacteria_phage	98.7	0.0e+00
QAY44222.1|1462634_1464572_+	hypothetical protein	NA	H6WZL0	Escherichia_phage	100.0	0.0e+00
QAY44223.1|1464616_1464838_+	hypothetical protein	NA	B6DZA0	Enterobacteria_phage	100.0	5.8e-36
QAY44224.1|1464783_1467369_+	hypothetical protein	NA	A0A0P0ZDD0	Stx2-converting_phage	100.0	0.0e+00
QAY44225.1|1467365_1467692_+	hypothetical protein	NA	A0A0P0ZBH1	Stx2-converting_phage	100.0	9.2e-54
QAY44226.1|1467701_1468052_+	hypothetical protein	NA	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
QAY44227.1|1468048_1468495_+	hypothetical protein	NA	A0A0N7KZI9	Stx2-converting_phage	100.0	5.2e-76
QAY44228.1|1468491_1468836_+	hypothetical protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
QAY44229.1|1468902_1469619_+	hypothetical protein	NA	A0A0P0ZDV1	Stx2-converting_phage	99.6	3.6e-127
QAY44230.1|1469633_1470008_+	hypothetical protein	NA	A0A0P0ZE84	Stx2-converting_phage	99.2	1.7e-64
QAY44231.1|1470103_1470313_+	hypothetical protein	NA	H6WZM0	Escherichia_phage	100.0	1.5e-33
QAY44232.1|1470360_1473603_+	hypothetical protein	NA	A0A0P0ZCJ4	Stx2-converting_phage	91.6	0.0e+00
QAY44233.1|1473595_1473937_+	hypothetical protein	NA	A0A0P0ZBQ8	Stx2-converting_phage	95.6	9.0e-60
QAY44234.1|1473936_1474635_+	hypothetical protein	NA	B6DZB1	Enterobacteria_phage	97.4	5.8e-130
QAY44235.1|1474645_1475389_+	hypothetical protein	NA	Q6H9T4	Enterobacteria_phage	97.6	4.3e-147
QAY44236.1|1475385_1475967_+	hypothetical protein	NA	H6WZM5	Escherichia_phage	97.4	1.3e-90
QAY44237.1|1476309_1479783_+	hypothetical protein	NA	A0A0P0ZBW1	Stx2-converting_phage	89.7	0.0e+00
QAY44238.1|1479850_1480309_+	Outer membrane protein X	NA	Q9EV15	Enterobacteria_phage	89.0	9.5e-65
QAY44239.1|1480423_1481965_+	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	46.4	1.7e-129
QAY44240.1|1481979_1482726_+	Insertion sequence IS5376 putative ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QAY44241.1|1483684_1484422_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44242.1|1484663_1486013_+	hypothetical protein	NA	Q858V4	Yersinia_virus	73.6	3.1e-127
QAY44243.1|1486014_1486548_+	hypothetical protein	NA	A0A077SL44	Escherichia_phage	70.1	1.8e-67
QAY44244.1|1486578_1487106_-	hypothetical protein	NA	A0A0C4UR05	Shigella_phage	77.7	8.4e-73
QAY44245.1|1487121_1488090_-	hypothetical protein	NA	A0A0F7LDR4	Escherichia_phage	38.8	6.5e-47
QAY44246.1|1488160_1488250_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44247.1|1488596_1489253_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44248.1|1489321_1489591_+	hypothetical protein	NA	K7PMH7	Enterobacteria_phage	79.4	9.3e-20
QAY44249.1|1489705_1489876_+	hypothetical protein	NA	A0A0U2RK60	Escherichia_phage	62.5	9.4e-10
QAY44250.1|1490002_1490560_-	hypothetical protein	NA	Q8H9L9	Vibrio_phage	63.8	4.2e-30
QAY44251.1|1491207_1492014_-	Tryptophan synthase alpha chain	NA	NA	NA	NA	NA
QAY44252.1|1492013_1493207_-	Tryptophan synthase beta chain	NA	NA	NA	NA	NA
QAY44253.1|1493218_1494577_-	Tryptophan biosynthesis protein TrpCF	NA	A0A0P0IR83	Acinetobacter_phage	41.2	3.9e-37
>prophage 6
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	1720905	1729732	5018242		Escherichia_phage(66.67%)	10	NA	NA
QAY44452.1|1720905_1722120_-	Starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.2	8.2e-47
QAY44453.1|1722325_1722652_-	hypothetical protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
QAY44454.1|1722786_1723128_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44455.1|1723162_1723723_+	Spermidine N(1)-acetyltransferase	NA	NA	NA	NA	NA
QAY44456.1|1723725_1724472_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44457.1|1724543_1724849_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44458.1|1725047_1727474_+	Putative dimethyl sulfoxide reductase chain YnfE	NA	A0A077SK27	Escherichia_phage	49.2	1.7e-213
QAY44459.1|1727561_1728296_+	putative dimethyl sulfoxide reductase chain YnfF	NA	A0A077SK27	Escherichia_phage	48.3	1.4e-46
QAY44460.1|1728292_1729030_+	putative dimethyl sulfoxide reductase chain YnfF	NA	A0A077SK27	Escherichia_phage	41.1	4.6e-45
QAY44461.1|1729114_1729732_+	Anaerobic dimethyl sulfoxide reductase chain B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
>prophage 7
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	2044662	2070637	5018242	tail	Escherichia_phage(36.36%)	36	NA	NA
QAY44769.1|2044662_2045082_-	hypothetical protein	NA	G8C7Q7	Escherichia_phage	68.8	1.8e-49
QAY44770.1|2045248_2045413_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44771.1|2045519_2046293_-	hypothetical protein	NA	R9TNM7	Vibrio_phage	30.7	9.2e-28
QAY44772.1|2046682_2047072_-	hypothetical protein	NA	E5FFG4	Burkholderia_phage	37.9	1.0e-14
QAY44773.1|2047107_2048748_-	hypothetical protein	NA	A0A2I7R3J9	Vibrio_phage	29.3	1.2e-19
QAY44774.1|2048856_2049138_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44775.1|2049150_2049663_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44776.1|2049680_2051183_-|tail	Putative prophage major tail sheath protein	tail	R9TMQ0	Vibrio_phage	33.5	5.5e-69
QAY44777.1|2051179_2051569_-	hypothetical protein	NA	A0A2H4EXG4	Aeromonas_phage	30.8	9.4e-05
QAY44778.1|2051568_2052753_-	hypothetical protein	NA	J9QDX3	Clostridium_phage	35.2	2.5e-16
QAY44779.1|2052745_2053372_-	hypothetical protein	NA	A0A193GYD1	Enterobacter_phage	38.8	2.0e-25
QAY44780.1|2053374_2054295_-	hypothetical protein	NA	D5LGZ3	Escherichia_phage	47.8	6.4e-68
QAY44781.1|2054291_2054681_-	hypothetical protein	NA	D4HTV2	Vibrio_phage	51.6	2.1e-20
QAY44782.1|2054635_2055538_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44783.1|2055518_2056055_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44784.1|2056051_2056732_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44785.1|2056763_2057144_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44786.1|2057140_2057560_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44787.1|2057594_2058629_-	hypothetical protein	NA	A0A2I6TCE5	Escherichia_phage	56.5	6.6e-106
QAY44788.1|2058687_2059017_-	hypothetical protein	NA	A0A2R9YJN3	Escherichia_phage	39.5	2.0e-08
QAY44789.1|2059016_2060324_-	Putative signal peptide peptidase SppA	NA	A0A2I6TC87	Escherichia_phage	53.7	4.9e-106
QAY44790.1|2060323_2061898_-	hypothetical protein	NA	E4WL21	Enterobacteria_phage	64.0	8.6e-190
QAY44791.1|2061894_2062128_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44792.1|2062127_2063990_-	hypothetical protein	NA	A0A1I9KF19	Aeromonas_phage	53.2	1.1e-191
QAY44793.1|2063976_2064543_-	hypothetical protein	NA	A0A1I9KFT4	Aeromonas_phage	46.2	2.9e-31
QAY44794.1|2064911_2065157_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44795.1|2065418_2065898_-	hypothetical protein	NA	A0A222YWL8	Escherichia_phage	68.8	4.6e-62
QAY44796.1|2065897_2066170_-	hypothetical protein	NA	A0A0A0YPY6	Escherichia_phage	42.9	9.8e-09
QAY44797.1|2066169_2066553_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44798.1|2066665_2067337_-	hypothetical protein	NA	Q7Y3X2	Yersinia_phage	33.5	1.9e-16
QAY44799.1|2067336_2067630_-	hypothetical protein	NA	A0A0U2KD41	Escherichia_phage	70.5	3.3e-34
QAY44800.1|2067626_2068223_-	hypothetical protein	NA	H9C173	Pectobacterium_phage	64.1	1.5e-70
QAY44801.1|2068300_2068480_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44802.1|2068631_2069273_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44803.1|2069516_2069750_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44804.1|2070148_2070637_+	hypothetical protein	NA	A0A142KB62	Gordonia_phage	42.7	6.4e-27
>prophage 8
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	2074699	2086868	5018242		Pectobacterium_phage(66.67%)	19	NA	NA
QAY44808.1|2074699_2075488_-	hypothetical protein	NA	A0A0P0ZC44	Stx2-converting_phage	69.8	1.1e-39
QAY44809.1|2075760_2075982_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44810.1|2076056_2076173_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44811.1|2076169_2076394_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44812.1|2076390_2076702_-	hypothetical protein	NA	A0A222YXX1	Escherichia_phage	65.7	1.2e-34
QAY44813.1|2076698_2076935_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44814.1|2076936_2077347_-	hypothetical protein	NA	NA	NA	NA	NA
QAY44815.1|2077385_2078801_-	Replicative DNA helicase	NA	H9C165	Pectobacterium_phage	66.7	6.6e-173
QAY44816.1|2078790_2079546_-	hypothetical protein	NA	H9C164	Pectobacterium_phage	68.5	2.4e-41
QAY44817.1|2079542_2079767_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	54.1	6.1e-17
QAY44818.1|2079806_2080283_-	hypothetical protein	NA	H9C162	Pectobacterium_phage	48.6	1.9e-23
QAY44819.1|2080341_2080572_-	hypothetical protein	NA	H6WRX5	Salmonella_phage	63.2	1.5e-21
QAY44820.1|2080670_2081084_+	hypothetical protein	NA	A0A1B5FPF4	Escherichia_phage	49.1	8.7e-09
QAY44821.1|2082094_2082415_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44822.1|2082445_2084662_+	hypothetical protein	NA	H9C157	Pectobacterium_phage	35.6	4.7e-101
QAY44823.1|2084658_2085228_+	hypothetical protein	NA	H9C156	Pectobacterium_phage	49.2	6.1e-37
QAY44824.1|2085227_2085410_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44825.1|2085619_2085883_+	hypothetical protein	NA	H9C153	Pectobacterium_phage	38.0	1.2e-06
QAY44826.1|2085851_2086868_+	hypothetical protein	NA	H9C152	Pectobacterium_phage	63.6	1.1e-126
>prophage 9
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	2231009	2237461	5018242		Acidithiobacillus_phage(16.67%)	10	NA	NA
QAY44952.1|2231009_2232551_+	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	46.4	1.7e-129
QAY44953.1|2232565_2233312_+	Insertion sequence IS5376 putative ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QAY44954.1|2233475_2233745_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44955.1|2233760_2234171_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44956.1|2234391_2235210_+	hypothetical protein	NA	A0A2C9CX26	Yersinia_phage	38.6	8.8e-45
QAY44957.1|2235209_2235455_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44958.1|2235548_2236022_+	Antirestriction protein KlcA	NA	A0A2D0W9W4	Bordetella_phage	33.1	4.3e-12
QAY44959.1|2236037_2236514_+	hypothetical protein	NA	NA	NA	NA	NA
QAY44960.1|2236576_2236798_+	hypothetical protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
QAY44961.1|2236816_2237461_+	hypothetical protein	NA	A0A2I6PI07	Pseudomonas_phage	32.9	1.8e-24
>prophage 10
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	2268264	2274567	5018242		Enterobacteria_phage(66.67%)	6	NA	NA
QAY44994.1|2268264_2268807_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	61.8	6.0e-50
QAY44995.1|2268811_2269690_-	Glucose-1-phosphate thymidylyltransferase 1	NA	I7I009	Enterobacteria_phage	64.5	6.6e-107
QAY44996.1|2269747_2270647_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.8	1.7e-28
QAY44997.1|2270646_2271732_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	8.8e-101
QAY44998.1|2272104_2272998_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.0	3.0e-46
QAY44999.1|2273172_2274567_-	hypothetical protein	NA	A0A291LBB9	Klebsiella_phage	33.0	6.3e-19
>prophage 11
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	2368743	2378188	5018242		Enterobacteria_phage(85.71%)	10	NA	NA
QAY45072.1|2368743_2369880_+	hypothetical protein	NA	Q9EYF7	Enterobacteria_phage	96.7	6.1e-161
QAY45073.1|2369876_2371880_+	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
QAY45074.1|2372004_2372466_+	putative lipoprotein YehR	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
QAY45075.1|2372506_2372977_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
QAY45076.1|2373023_2373743_-	Transcriptional regulatory protein YehT	NA	NA	NA	NA	NA
QAY45077.1|2373739_2375425_-	Sensor histidine kinase YehU	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
QAY45078.1|2375646_2376378_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	98.5	6.3e-111
QAY45079.1|2376437_2376545_+	hypothetical protein	NA	NA	NA	NA	NA
QAY45080.1|2376525_2377257_-	Glycine betaine uptake system permease protein YehW	NA	NA	NA	NA	NA
QAY45081.1|2377261_2378188_-	Glycine betaine uptake system ATP-binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
>prophage 12
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	2956392	2963532	5018242		Escherichia_phage(83.33%)	6	NA	NA
QAY45598.1|2956392_2958954_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.8	1.6e-31
QAY45599.1|2959059_2959716_+	Serine/threonine-protein phosphatase 2	NA	A0A077SLQ6	Escherichia_phage	46.1	3.3e-50
QAY45600.1|2959766_2960534_-	HTH-type transcriptional repressor GlcR	NA	A0A077SK06	Escherichia_phage	57.4	9.7e-70
QAY45601.1|2960729_2961638_+	2-hydroxy-3-oxopropionate reductase	NA	A0A077SLF7	Escherichia_phage	76.2	1.9e-117
QAY45602.1|2961634_2962897_+	hypothetical protein	NA	A0A077SLJ7	Escherichia_phage	61.4	2.2e-135
QAY45603.1|2962893_2963532_+	L-fuculose phosphate aldolase	NA	A0A077SK32	Escherichia_phage	74.5	1.4e-82
>prophage 13
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	3246867	3256629	5018242	integrase	Escherichia_phage(75.0%)	13	3240276:3240290	3248868:3248882
3240276:3240290	attL	GTTACGCACTGGCGC	NA	NA	NA	NA
QAY45851.1|3246867_3248133_+|integrase	Prophage integrase IntS	integrase	Q7M297	Enterobacteria_phage	38.1	2.1e-77
QAY45852.1|3248388_3249339_+	hypothetical protein	NA	NA	NA	NA	NA
3248868:3248882	attR	GTTACGCACTGGCGC	NA	NA	NA	NA
QAY45853.1|3249389_3249665_+	hypothetical protein	NA	Q71TE9	Escherichia_phage	96.7	7.7e-46
QAY45854.1|3249793_3250087_+	hypothetical protein	NA	U5P0U6	Shigella_phage	92.8	8.3e-46
QAY45855.1|3250737_3251013_+	hypothetical protein	NA	Q71TE9	Escherichia_phage	98.9	2.0e-46
QAY45856.1|3251057_3251435_+	hypothetical protein	NA	Q71TF0	Escherichia_phage	99.2	1.1e-66
QAY45857.1|3251901_3252402_-	Transcriptional repressor MprA	NA	NA	NA	NA	NA
QAY45858.1|3252724_3253102_-	hypothetical protein	NA	Q71TF0	Escherichia_phage	99.2	1.1e-66
QAY45859.1|3253146_3253422_-	hypothetical protein	NA	Q71TE9	Escherichia_phage	98.9	2.0e-46
QAY45860.1|3253450_3253720_-	Pap fimbrial major pilin protein	NA	NA	NA	NA	NA
QAY45861.1|3253716_3254019_-	Pap fimbrial major pilin protein	NA	NA	NA	NA	NA
QAY45862.1|3254956_3255178_+	P fimbrial regulatory protein KS71A	NA	NA	NA	NA	NA
QAY45863.1|3255828_3256629_-	hypothetical protein	NA	A0A0N7C1X7	Escherichia_phage	97.0	2.3e-146
>prophage 14
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	4054117	4061495	5018242		Sodalis_phage(33.33%)	8	NA	NA
QAY46631.1|4054117_4054720_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	36.3	2.6e-25
QAY46632.1|4054730_4055072_+	hypothetical protein	NA	A0A1B5FPL8	Escherichia_phage	61.5	2.5e-33
QAY46633.1|4055064_4055436_+	hypothetical protein	NA	NA	NA	NA	NA
QAY46634.1|4055422_4058179_+	DNA primase TraC	NA	A0A1W6JPG0	Morganella_phage	57.3	1.8e-299
QAY46635.1|4058763_4058925_+	hypothetical protein	NA	NA	NA	NA	NA
QAY46636.1|4058941_4059403_+	hypothetical protein	NA	Q2A0B3	Sodalis_phage	72.2	9.9e-62
QAY46637.1|4059396_4060074_+	hypothetical protein	NA	Q2A0B2	Sodalis_phage	71.6	9.2e-56
QAY46638.1|4060073_4061495_+	hypothetical protein	NA	B6SCW4	Bacteriophage	53.2	5.7e-124
>prophage 15
CP035476	Escherichia coli strain U12A chromosome, complete genome	5018242	4725742	4732806	5018242	integrase	Escherichia_phage(50.0%)	8	4718735:4718748	4734457:4734470
4718735:4718748	attL	AATTACCGTCTTTG	NA	NA	NA	NA
QAY47234.1|4725742_4726246_+	hypothetical protein	NA	U5P0U6	Shigella_phage	98.2	5.3e-93
QAY47235.1|4727271_4727772_+	Transcriptional repressor MprA	NA	NA	NA	NA	NA
QAY47236.1|4728238_4728616_-	hypothetical protein	NA	Q71TF0	Escherichia_phage	99.2	1.1e-66
QAY47237.1|4728660_4728936_-	hypothetical protein	NA	Q71TE9	Escherichia_phage	98.9	2.0e-46
QAY47238.1|4729586_4729880_-	hypothetical protein	NA	U5P0U6	Shigella_phage	92.8	8.3e-46
QAY47239.1|4730008_4730284_-	hypothetical protein	NA	Q71TE9	Escherichia_phage	96.7	7.7e-46
QAY47240.1|4730334_4731285_-	hypothetical protein	NA	NA	NA	NA	NA
QAY47241.1|4731540_4732806_-|integrase	Prophage integrase IntS	integrase	Q7M297	Enterobacteria_phage	37.8	2.3e-76
4734457:4734470	attR	CAAAGACGGTAATT	NA	NA	NA	NA
>prophage 1
CP035468	Escherichia coli strain U12A plasmid pU12A_A, complete sequence	151747	72685	81927	151747		Escherichia_phage(55.56%)	10	NA	NA
QAY42474.1|72685_75802_-	Type I restriction enzyme EcoR124II R protein	NA	A0A220A398	Liberibacter_phage	24.0	3.7e-27
QAY42475.1|75923_77207_-	hypothetical protein	NA	F2Y1N5	Organic_Lake_phycodnavirus	26.5	2.2e-10
QAY42476.1|77203_78760_-	putative type I restriction enzymeP M protein	NA	A0A2H4PQP4	Staphylococcus_phage	42.7	3.2e-104
QAY42477.1|78942_79164_+	hypothetical protein	NA	A0A222YXU1	Escherichia_phage	100.0	6.7e-32
QAY42478.1|79163_79544_+	Toxin Doc	NA	A0A077SK56	Escherichia_phage	100.0	1.1e-63
QAY42479.1|79548_79728_+	hypothetical protein	NA	Q71TH5	Escherichia_phage	96.6	3.5e-23
QAY42480.1|79755_80115_+	hypothetical protein	NA	A0A077SLM1	Escherichia_phage	98.9	5.0e-45
QAY42481.1|80077_80452_+	hypothetical protein	NA	Q716C2	Shigella_phage	94.3	5.4e-66
QAY42482.1|80401_80719_-	hypothetical protein	NA	NA	NA	NA	NA
QAY42483.1|80946_81927_-	hypothetical protein	NA	Q38213	Escherichia_phage	99.4	6.1e-186
>prophage 2
CP035468	Escherichia coli strain U12A plasmid pU12A_A, complete sequence	151747	96875	104603	151747		Stx2-converting_phage(45.45%)	12	NA	NA
QAY42497.1|96875_97394_-	hypothetical protein	NA	A0A0P0ZEB3	Stx2-converting_phage	99.4	6.5e-94
QAY42498.1|97551_98331_-	Insertion sequence IS5376 putative ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	100.0	1.5e-139
QAY42499.1|98330_99353_-	hypothetical protein	NA	A0A2L1IVA1	Escherichia_phage	99.7	3.2e-201
QAY42500.1|99366_100125_-	hypothetical protein	NA	A0A0P0ZBS5	Stx2-converting_phage	96.9	9.1e-129
QAY42501.1|100126_100384_-	hypothetical protein	NA	A0A0P0ZEB3	Stx2-converting_phage	97.4	2.3e-31
QAY42502.1|100432_100780_-	hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
QAY42503.1|100776_101181_-	hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
QAY42504.1|101209_101566_-	hypothetical protein	NA	Q6H9S3	Enterobacteria_phage	99.0	3.6e-51
QAY42505.1|101682_103206_-	Group II intron-encoded protein LtrA	NA	A0A0U4J920	Pseudomonas_phage	31.8	6.2e-44
QAY42506.1|103499_103871_+	hypothetical protein	NA	NA	NA	NA	NA
QAY42507.1|103797_104277_-	hypothetical protein	NA	A0A0N7C035	Escherichia_phage	94.9	2.7e-70
QAY42508.1|104276_104603_-	Insertion element IS6110 uncharacterized 12.0 kDa protein	NA	Q6H9S4	Enterobacteria_phage	97.2	1.8e-54
