assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004136295.1_ASM413629v1	CP029606	Methylibium sp. Pch-M chromosome, complete genome	1	1228902-1228991	1	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,DinG,csa3,cas3	Orphan	AGAAGTTGTTGTTCTGCTCCGAGA	24	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,DinG,csa3,cas3	NA|155aa|up_2|CP029606.1_1226542_1227007_-,NA	NA|275aa|up_9|CP029606.1_1220618_1221443_-	COG4137, COG4137, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|458aa|up_8|CP029606.1_1221549_1222923_+	PRK10867, PRK10867, signal recognition particle protein; Provisional	NA|266aa|up_7|CP029606.1_1223003_1223801_+	pfam10881, DUF2726, Protein of unknown function (DUF2726)	NA|351aa|up_6|CP029606.1_1223817_1224870_-	PRK10416, PRK10416, signal recognition particle-docking protein FtsY; Provisional	NA|205aa|up_5|CP029606.1_1225000_1225615_+	COG0742, COG0742, N6-adenine-specific methylase [DNA replication, recombination, and repair]	NA|167aa|up_4|CP029606.1_1225650_1226151_+	PRK00168, coaD, phosphopantetheine adenylyltransferase; Provisional	NA|100aa|up_3|CP029606.1_1226227_1226527_+	cd10549, MtMvhB_like, Uncharacterized polyferredoxin-like protein	NA|155aa|up_2|CP029606.1_1226542_1227007_-	NA	NA|233aa|up_1|CP029606.1_1227015_1227714_-	PRK05426, PRK05426, peptidyl-tRNA hydrolase; Provisional	NA|216aa|up_0|CP029606.1_1228169_1228817_-	PRK05618, PRK05618, 50S ribosomal protein L25/general stress protein Ctc; Reviewed	NA|288aa|down_0|CP029606.1_1230162_1231026_-	PRK00343, ipk, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional	NA|175aa|down_1|CP029606.1_1231038_1231563_-	cd16326, LolB, LolB, an outer membrane lipoprotein receptor	NA|610aa|down_2|CP029606.1_1231559_1233389_-	TIGR02917, TPR_domain_protein, putative PEP-CTERM system TPR-repeat lipoprotein	NA|280aa|down_3|CP029606.1_1233439_1234279_+	PRK01103, PRK01103, bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase	NA|676aa|down_4|CP029606.1_1234408_1236436_+	cd09912, DLP_2, Dynamin-like protein including dynamins, mitofusins, and guanylate-binding proteins	NA|369aa|down_5|CP029606.1_1236432_1237539_+	COG1194, MutY, A/G-specific DNA glycosylase [DNA replication, recombination, and repair]	NA|193aa|down_6|CP029606.1_1237535_1238114_-	PRK00116, ruvA, Holliday junction branch migration protein RuvA	NA|220aa|down_7|CP029606.1_1238156_1238816_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|620aa|down_8|CP029606.1_1238883_1240743_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|321aa|down_9|CP029606.1_1240835_1241798_+	COG1702, PhoH, Phosphate starvation-inducible protein PhoH, predicted ATPase [Signal transduction mechanisms]
GCA_004136295.1_ASM413629v1	CP029606	Methylibium sp. Pch-M chromosome, complete genome	3	2155984-2156111	3	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,DinG,csa3,cas3	Orphan	GCCTCGGATCGCGCCAGCCGTTGCGCAGCAAGGCACGCGCGGACG	45	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,DinG,csa3,cas3	NA,NA	NA|221aa|up_9|CP029606.1_2146822_2147485_-	cd04221, MauL, Methylamine utilization protein MauL	NA|364aa|up_8|CP029606.1_2147567_2148659_-	PRK05574, holA, DNA polymerase III subunit delta; Reviewed	NA|170aa|up_7|CP029606.1_2148690_2149200_-	COG2980, RlpB, Rare lipoprotein B [Cell envelope biogenesis, outer membrane]	NA|889aa|up_6|CP029606.1_2149205_2151872_-	PRK00390, leuS, leucyl-tRNA synthetase; Validated	NA|146aa|up_5|CP029606.1_2151963_2152401_-	COG0848, ExbD, Biopolymer transport protein [Intracellular trafficking and secretion]	NA|222aa|up_4|CP029606.1_2152407_2153073_-	COG0811, TolQ, Biopolymer transport proteins [Intracellular trafficking and secretion]	NA|277aa|up_3|CP029606.1_2153084_2153915_-	PRK00048, PRK00048, dihydrodipicolinate reductase; Provisional	NA|182aa|up_2|CP029606.1_2153911_2154457_-	pfam04355, SmpA_OmlA, SmpA / OmlA family	NA|146aa|up_1|CP029606.1_2154576_2155014_+	PRK09462, fur, ferric uptake regulator; Provisional	NA|319aa|up_0|CP029606.1_2155021_2155978_-	PRK05428, PRK05428, HPr kinase/phosphorylase; Provisional	NA|157aa|down_0|CP029606.1_2156199_2156670_-	TIGR01419, nitro_reg_IIA, PTS IIA-like nitrogen-regulatory protein PtsN	NA|115aa|down_1|CP029606.1_2156892_2157237_-	cd00552, RaiA, RaiA ("ribosome-associated inhibitor A", also known as Protein Y (PY), YfiA, and SpotY,  is a stress-response protein that binds the ribosomal subunit interface and arrests translation by interfering with aminoacyl-tRNA binding to the ribosomal A site	NA|319aa|down_2|CP029606.1_2157607_2158564_+	cd12835, EcCorA-like_1, Escherichia coli Mg2+ transporter CorA_like subgroup	NA|393aa|down_3|CP029606.1_2158601_2159780_+	cd17477, MFS_YcaD_like, YcaD and similar transporters of the Major Facilitator Superfamily	NA|147aa|down_4|CP029606.1_2159795_2160236_-	pfam12680, SnoaL_2, SnoaL-like domain	NA|262aa|down_5|CP029606.1_2160235_2161021_-	cd05350, SDR_c6, classical (c) SDR, subgroup 6	NA|183aa|down_6|CP029606.1_2161027_2161576_-	pfam12915, DUF3833, Protein of unknown function (DUF3833)	NA|436aa|down_7|CP029606.1_2161572_2162880_-	pfam13347, MFS_2, MFS/sugar transport protein	NA|191aa|down_8|CP029606.1_2162876_2163449_-	pfam16036, Chalcone_3, Chalcone isomerase-like	NA|421aa|down_9|CP029606.1_2163448_2164711_-	COG2230, Cfa, Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
GCA_004136295.1_ASM413629v1	CP029606	Methylibium sp. Pch-M chromosome, complete genome	4	2422115-2422215	4	CRISPRCasFinder	no		DEDDh,Cas9_archaeal,DinG,csa3,cas3	Orphan	CGTGCGCAGGCCCGGGTCGATGCCGAG	27	0	0	NA	NA	NA	1	1	Orphan	DEDDh,Cas9_archaeal,DinG,csa3,cas3	NA,NA|165aa|down_7|CP029606.1_2428624_2429119_-	NA|299aa|up_9|CP029606.1_2409669_2410566_+	TIGR04558, beta-lactamase_domain-containing_protein, quinoprotein relay system zinc metallohydrolase 1	NA|581aa|up_8|CP029606.1_2410742_2412485_+	TIGR03075, PQQ_enz_alc_DH, PQQ-dependent dehydrogenase, methanol/ethanol family	NA|170aa|up_7|CP029606.1_2412580_2413090_-	TIGR04494, cytochrome_c550, cytochrome c-550 PedF	NA|205aa|up_6|CP029606.1_2413093_2413708_-	COG1357, COG1357, Pentapeptide repeats containing protein [Function unknown]	NA|619aa|up_5|CP029606.1_2413789_2415646_-	cd10277, PQQ_ADH_I, Ethanol dehydrogenase, a bacterial quinoprotein (PQQ-dependent type I alcohol dehydrogenase)	NA|449aa|up_4|CP029606.1_2415825_2417172_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|207aa|up_3|CP029606.1_2417161_2417782_+	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|713aa|up_2|CP029606.1_2417854_2419993_-	COG3284, AcoR, Transcriptional activator of acetoin/glycerol metabolism [Secondary metabolites biosynthesis, transport, and catabolism / Transcription]	NA|158aa|up_1|CP029606.1_2420274_2420748_+	TIGR04494, cytochrome_c550, cytochrome c-550 PedF	NA|277aa|up_0|CP029606.1_2420744_2421575_+	cd13693, PBP2_polar_AA, Substrate binding domain of polar amino-acid uptake  ABC transporter; the type 2 periplasmic binding protein fold	NA|325aa|down_0|CP029606.1_2422229_2423204_-	COG4589, COG4589, Predicted CDP-diglyceride synthetase/phosphatidate cytidylyltransferase [General function prediction only]	NA|209aa|down_1|CP029606.1_2423200_2423827_-	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|532aa|down_2|CP029606.1_2423878_2425474_-	PRK00881, purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Provisional	NA|80aa|down_3|CP029606.1_2425521_2425761_-	PRK01905, PRK01905, Fis family transcriptional regulator	NA|347aa|down_4|CP029606.1_2425757_2426798_-	TIGR00737, Probable_tRNA-dihydrouridine_synthase, putative TIM-barrel protein, nifR3 family	NA|161aa|down_5|CP029606.1_2426914_2427397_+	COG1238, COG1238, Predicted membrane protein [Function unknown]	NA|398aa|down_6|CP029606.1_2427434_2428628_-	cd07208, Pat_hypo_Ecoli_yjju_like, Hypothetical patatin similar to yjju protein of Escherichia coli	NA|165aa|down_7|CP029606.1_2428624_2429119_-	NA	NA|183aa|down_8|CP029606.1_2429154_2429703_-	pfam05597, Phasin, Poly(hydroxyalcanoate) granule associated protein (phasin)	NA|669aa|down_9|CP029606.1_2429931_2431938_+	PRK07201, PRK07201, SDR family oxidoreductase
