The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	349033	358204	4686022	lysis,tRNA	Enterobacteria_phage(66.67%)	9	NA	NA
QAZ99909.1|349033_349981_+	Osmoprotectant ABC transporter ATP-binding subunit YehX	NA	F2Y1V5	Organic_Lake_phycodnavirus	27.8	2.8e-10
QAZ99910.1|349964_350696_+	Osmoprotectant ABC transporter inner membrane protein YehW	NA	NA	NA	NA	NA
QAZ99911.1|350843_351575_-	HTH-type transcriptional regulator mlrA	NA	Q9EYF2	Enterobacteria_phage	86.9	2.5e-99
QAZ99912.1|351797_353483_+|lysis	Autolysis histidine kinase LytS	lysis	Q9EYF3	Enterobacteria_phage	91.1	6.2e-279
QAZ99913.1|353479_354199_+	Two-component response-regulatory protein YehT	NA	NA	NA	NA	NA
QAZ99914.1|354245_354713_+	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	89.7	4.3e-73
QAZ99915.1|354769_355300_-	lipoprotein	NA	NA	NA	NA	NA
QAZ99916.1|355471_355930_-	putative lipoprotein yehR	NA	Q9EYF5	Enterobacteria_phage	72.5	6.4e-53
QAZ99917.1|356170_358204_-|tRNA	Methionyl-tRNA synthetase	tRNA	A0A1V0SDF2	Indivirus	26.9	6.1e-55
>prophage 2
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	425401	435908	4686022		Enterobacteria_phage(37.5%)	10	NA	NA
QAZ99975.1|425401_426805_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	4.0e-21
QAZ99976.1|426982_427876_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.2	4.8e-44
QAZ99977.1|428252_429338_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.6e-102
QAZ99978.1|429337_430237_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.0	5.1e-30
QAZ99979.1|430284_431163_+	Glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	65.5	2.1e-108
QAZ99980.1|431166_431715_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	58.0	1.3e-52
QAZ99981.1|431720_432695_+	CDP-6-deoxy-delta-3,4-glucoseen reductase-like	NA	NA	NA	NA	NA
QAZ99982.1|432710_433484_+	Glucose-1-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
QAZ99983.1|433488_434568_+	CDP-glucose 4,6-dehydratase-like protein	NA	A0A222YY99	Synechococcus_phage	24.5	1.7e-16
QAZ99984.1|434594_435908_+	CDP-4-dehydro-6-deoxy-D-glucose 3-dehydratase	NA	H8ZJ36	Ostreococcus_tauri_virus	35.1	7.0e-52
>prophage 3
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	548829	596325	4686022	capsid,transposase,terminase,portal,tail,plate,integrase	Salmonella_phage(79.25%)	61	551730:551744	599920:599934
QBA00099.1|548829_550104_-|integrase	integrase	integrase	B7SYF8	Stenotrophomonas_phage	39.9	2.4e-73
QBA00100.1|550767_551058_-|integrase	integrase	integrase	H2BDA3	Pseudomonas_phage	49.1	1.2e-07
QBA00101.1|551429_552227_-	hypothetical protein	NA	NA	NA	NA	NA
551730:551744	attL	AGGGATGCCGCTGGC	NA	NA	NA	NA
QBA00102.1|552518_553508_-|integrase	Phage integrase	integrase	A0A192Y7M7	Salmonella_phage	100.0	8.6e-196
QBA00103.1|553509_553752_-	hypothetical protein	NA	Q8HAA9	Salmonella_phage	100.0	9.5e-40
QBA00104.1|553776_554346_-	exonuclease	NA	A0A192Y6E0	Salmonella_phage	99.5	9.3e-110
QBA00105.1|554342_555206_-	Phage EaA protein	NA	S4TSR6	Salmonella_phage	49.2	5.2e-64
QBA00106.1|555202_555496_-	Phage protein	NA	A0A1V0E5L2	Salmonella_phage	100.0	1.5e-50
QBA00107.1|555767_556127_-	Phage EaF protein	NA	T1SA95	Salmonella_phage	89.9	1.0e-58
QBA00108.1|556123_556639_-	hypothetical protein	NA	A0A2H4FWH2	Salmonella_phage	96.5	1.3e-94
QBA00109.1|556635_556866_-	hypothetical protein	NA	Q8HAA4	Salmonella_phage	100.0	2.0e-34
QBA00110.1|556936_557476_-	yfdR	NA	A0A192Y8M4	Salmonella_phage	100.0	2.6e-98
QBA00111.1|557570_558488_-	DNA recombination-dependent growth factor C	NA	S4TWL4	Salmonella_phage	59.7	1.3e-97
QBA00112.1|559057_559309_+	bssS family protein	NA	NA	NA	NA	NA
QBA00113.1|559208_559457_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00114.1|559384_559570_-	ClpX C4-type zinc finger	NA	A0A1C9II97	Salmonella_phage	73.3	1.2e-13
QBA00115.1|559775_560471_-	regulatory protein	NA	Q8HAA0	Salmonella_phage	99.6	2.7e-127
QBA00116.1|560568_560793_+	Phage DNA-binding protein	NA	A0A1C9IHV8	Salmonella_phage	100.0	1.9e-34
QBA00117.1|560821_561376_+	hypothetical protein	NA	A0A1C9II13	Salmonella_phage	98.9	3.4e-101
QBA00118.1|561543_562530_+	Phage regulatory protein Rha	NA	Q8HA97	Salmonella_phage	98.5	8.6e-180
QBA00119.1|562526_562751_+	hypothetical protein	NA	A0A1C9II64	Salmonella_phage	100.0	3.3e-39
QBA00120.1|562747_563722_+	hypothetical protein	NA	A0A1C9IHW0	Salmonella_phage	97.8	1.2e-165
QBA00121.1|563718_564192_+	hypothetical protein	NA	A0A1C9IHW0	Salmonella_phage	94.6	3.9e-53
QBA00122.1|564188_565070_+	Methyl-directed repair DNA adenine methylase	NA	A0A1C9II58	Salmonella_phage	96.2	8.3e-166
QBA00123.1|565159_565468_+	Holliday junction resolvase / Crossover junction endodeoxyribonuclease rusA	NA	A0A1C9IIA0	Salmonella_phage	99.0	2.4e-51
QBA00124.1|565484_566345_+	Phage-related protein	NA	A0A192Y6F8	Salmonella_phage	98.3	1.5e-159
QBA00125.1|566424_567342_+	Phage antitermination protein Q	NA	A0A1C9IHZ5	Salmonella_phage	97.4	4.9e-177
QBA00126.1|567355_568108_+	Phage antitermination protein Q	NA	A0A192Y5X6	Salmonella_phage	92.0	1.9e-134
QBA00127.1|568157_569231_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00128.1|569243_569816_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00129.1|569904_570294_+	prophage membrane protein	NA	K7PHB9	Enterobacterial_phage	71.0	1.8e-40
QBA00130.1|570280_570562_+	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	80.6	3.3e-36
QBA00131.1|570561_571179_+	Lytic enzyme	NA	Q8HA86	Salmonella_phage	78.9	3.2e-92
QBA00132.1|571175_571715_+	exported phage protein	NA	A0A0A0P0G7	Enterobacteria_phage	37.2	5.3e-06
QBA00133.1|572235_572673_+|terminase	Phage terminase, small subunit	terminase	A0A1J0GV10	Halomonas_phage	63.7	1.6e-32
QBA00134.1|572672_574403_+|terminase	Phage terminase, large subunit	terminase	Q8W631	Enterobacteria_phage	58.9	3.2e-198
QBA00135.1|574399_574558_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00136.1|574551_575769_+|portal	Phage portal protein	portal	A0A1W6JP33	Morganella_phage	79.4	7.6e-194
QBA00137.1|575761_576364_+	Membrane protein related to metalloendopeptidase	NA	Q8SBH9	Shigella_phage	91.5	2.0e-99
QBA00138.1|576373_577603_+|capsid	Phage major capsid protein	capsid	Q8SBH8	Shigella_phage	90.9	1.8e-206
QBA00139.1|577682_578006_+	hypothetical protein	NA	Q8SBH7	Shigella_phage	72.0	2.6e-40
QBA00140.1|578002_578407_+	Sb9	NA	A0A192Y6C2	Salmonella_phage	96.3	1.5e-69
QBA00141.1|578378_578891_+	hypothetical protein	NA	Q8HAC8	Salmonella_phage	93.5	1.4e-85
QBA00142.1|578887_579448_+	hypothetical protein	NA	A0A192Y5U4	Salmonella_phage	99.5	3.0e-105
QBA00143.1|579451_579616_+	Mu-like prophage FluMu protein GP38	NA	Q8HAC6	Salmonella_phage	100.0	1.0e-24
QBA00144.1|579605_581102_+|tail	Bacteriophage tail sheath protein	tail	Q8HAC5	Salmonella_phage	99.2	3.0e-277
QBA00145.1|581101_581458_+|tail	Phage tail tube protein	tail	A0A192Y8K0	Salmonella_phage	100.0	2.6e-62
QBA00146.1|581454_581781_+	Phage protein	NA	Q8HAC3	Salmonella_phage	99.1	2.3e-52
QBA00147.1|581865_583794_+|tail	Phage tail length tape-measure protein	tail	Q8HAC2	Salmonella_phage	99.5	0.0e+00
QBA00148.1|583827_585168_+|tail	Phage tail/DNA circulation protein	tail	A0A192Y5U9	Salmonella_phage	99.1	1.1e-249
QBA00149.1|585164_586223_+|tail	Prophage tail protein	tail	A0A192Y7L7	Salmonella_phage	100.0	1.3e-202
QBA00150.1|586222_586756_+|plate	Prophage baseplate assembly protein V	plate	Q8HAB9	Salmonella_phage	99.4	2.1e-95
QBA00151.1|586760_587174_+	Bacteriophage protein GP46	NA	Q8HAB8	Salmonella_phage	100.0	1.1e-75
QBA00152.1|587166_588246_+	Phage FluMu protein gp47	NA	A0A192Y6E4	Salmonella_phage	99.7	2.5e-204
QBA00153.1|588248_588836_+|tail	Prophage tail protein	tail	A0A192Y5V3	Salmonella_phage	100.0	2.9e-114
QBA00154.1|588822_590385_+|tail	Phage tail fiber	tail	Q8HAB4	Salmonella_phage	99.8	9.8e-287
QBA00155.1|590384_590954_+|tail	Phage tail fiber	tail	Q8HAB3	Salmonella_phage	100.0	7.3e-107
QBA00156.1|591238_592246_-	cytoplasmic protein	NA	Q8HAB2	Salmonella_phage	100.0	7.9e-197
QBA00157.1|592458_592680_+	hypothetical protein	NA	Q8HAB1	Salmonella_phage	100.0	1.2e-36
QBA00158.1|594022_594841_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00159.1|595302_596325_+|transposase	transposase	transposase	NA	NA	NA	NA
599920:599934	attR	AGGGATGCCGCTGGC	NA	NA	NA	NA
>prophage 4
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	1128492	1147164	4686022	tRNA,integrase	Escherichia_phage(66.67%)	26	1131097:1131110	1143996:1144009
QBA00684.1|1128492_1128927_+	Universal stress protein F	NA	A0A1W6JNV4	Morganella_phage	52.1	9.4e-30
QBA00685.1|1128976_1129315_-	Ethidium bromide-methyl viologen resistance protein EmrE	NA	NA	NA	NA	NA
QBA00686.1|1129954_1130137_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00687.1|1130160_1130706_-	SECRETION ACTIVATOR PROTEIN	NA	A0A0U2S643	Escherichia_phage	83.4	2.3e-89
QBA00688.1|1130702_1130984_-	prophage membrane protein	NA	K7PKN9	Enterobacterial_phage	49.4	1.3e-16
QBA00689.1|1131083_1131479_-	hypothetical protein	NA	Q71TK7	Escherichia_phage	88.9	4.7e-44
1131097:1131110	attL	CAGCGCATCCAGCG	NA	NA	NA	NA
QBA00690.1|1132088_1132262_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00691.1|1133649_1134186_-	Phage antitermination protein Q	NA	A0A0U2S606	Escherichia_phage	70.9	1.4e-70
QBA00692.1|1134182_1134473_-	hypothetical protein	NA	A0A0U2KD41	Escherichia_phage	76.0	5.1e-40
QBA00693.1|1134472_1135072_-	putative bacteriophage protein	NA	A0A0U2RT94	Escherichia_phage	82.9	5.5e-97
QBA00694.1|1135134_1135305_-	hypothetical protein	NA	A0A0U2I1S4	Escherichia_phage	61.8	8.5e-11
QBA00695.1|1135595_1135751_-	Hok/Gef family protein	NA	A0A0U2QV81	Escherichia_phage	96.1	1.5e-17
QBA00696.1|1136177_1137110_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00697.1|1137106_1137661_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00698.1|1137822_1138113_-	hypothetical protein	NA	A0A0U2QQN3	Escherichia_phage	52.8	1.8e-21
QBA00699.1|1138424_1138892_+	transcriptional regulator	NA	A0A0U2QW76	Escherichia_phage	66.9	1.0e-53
QBA00700.1|1139267_1139432_+	Mobile element protein	NA	M4QQ57	Salicola_phage	46.8	6.1e-06
QBA00701.1|1139539_1140061_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00702.1|1140498_1140720_+	Kil protein	NA	A0A0U2RTC4	Escherichia_phage	83.6	7.9e-33
QBA00703.1|1140804_1141122_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00704.1|1141149_1141767_+	hypothetical protein	NA	A0A088CD28	Shigella_phage	41.9	2.5e-36
QBA00705.1|1141759_1142032_+|integrase	Phage integrase	integrase	A0A0U2JGI6	Escherichia_phage	100.0	6.5e-45
QBA00706.1|1142083_1143019_+|tRNA	tRNA(Cytosine32)-2-thiocytidine synthetase	tRNA	A0A0U2S5Z2	Escherichia_phage	97.3	7.2e-144
QBA00707.1|1143062_1144436_-	ATP-dependent 23S rRNA helicase DbpA	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.0	2.1e-51
1143996:1144009	attR	CAGCGCATCCAGCG	NA	NA	NA	NA
QBA00708.1|1144922_1145906_-	Zinc transport protein ZntB	NA	NA	NA	NA	NA
QBA00709.1|1146051_1147164_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.7	1.5e-10
>prophage 5
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	1335726	1413265	4686022	tRNA,terminase,tail,holin,protease,integrase	Enterobacteria_phage(27.03%)	88	1364439:1364463	1384050:1384074
QBA00891.1|1335726_1336605_-|protease	protease HtpX	protease	NA	NA	NA	NA
QBA00892.1|1336801_1338850_-|protease	Tail-specific protease precursor	protease	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
QBA00893.1|1338869_1339556_-	ProQ: influences osmotic activation of compatible solute Protein	NA	NA	NA	NA	NA
QBA00894.1|1339653_1340151_-	Free methionine-(R)-sulfoxide reductase, contains GAF domain	NA	NA	NA	NA	NA
QBA00895.1|1340279_1341563_+	Paraquat-inducible protein A	NA	NA	NA	NA	NA
QBA00896.1|1341531_1344165_+	Paraquat-inducible protein B	NA	NA	NA	NA	NA
QBA00897.1|1344140_1345682_+	ribosomal RNA small subunit methyltransferase F	NA	NA	NA	NA	NA
QBA00898.1|1345796_1346036_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00899.1|1346146_1346338_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00900.1|1346356_1347004_-	serine/threonine protein phosphatase	NA	A0A222YWF0	Escherichia_phage	50.9	5.5e-58
QBA00901.1|1347024_1347240_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00902.1|1347230_1347395_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00903.1|1347679_1348402_-	G-nucleotide exchange factor SopE	NA	NA	NA	NA	NA
QBA00904.1|1349100_1349481_+	hypothetical protein	NA	C6ZCX4	Enterobacteria_phage	32.8	8.9e-16
QBA00905.1|1349810_1350287_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00906.1|1350658_1351078_-	acetyltransferase	NA	NA	NA	NA	NA
QBA00907.1|1351209_1351404_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00908.1|1352218_1353379_-	Mobile element protein	NA	A0A218MNI5	uncultured_virus	49.1	1.2e-39
QBA00909.1|1353753_1353981_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00910.1|1354346_1354565_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00911.1|1355164_1356079_+	Permease of the drug/metabolite transporter (DMT) superfamily	NA	NA	NA	NA	NA
QBA00912.1|1356211_1356370_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00913.1|1356379_1356994_+	inner membrane protein	NA	NA	NA	NA	NA
QBA00914.1|1359120_1359357_-|tail	Phage tail fiber	tail	A0A0M4RTP2	Salmonella_phage	73.3	6.7e-22
QBA00915.1|1359569_1360256_-|tail	phage tail assembly-like protein	tail	A0A0M4QWS3	Salmonella_phage	91.2	1.1e-59
QBA00916.1|1360576_1361173_-|tail	Phage tail fiber protein	tail	Q1MVL8	Enterobacteria_phage	42.7	6.6e-34
QBA00917.1|1361165_1361540_-	hypothetical protein	NA	Q8VNN7	Enterobacteria_phage	82.1	1.1e-58
QBA00918.1|1361559_1361739_-|terminase	Phage terminase, large subunit	terminase	Q9EYD1	Enterobacteria_phage	53.2	2.7e-07
QBA00919.1|1361725_1362217_-	hypothetical protein	NA	Q9EYD0	Enterobacteria_phage	56.2	7.1e-42
QBA00920.1|1362271_1362460_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00921.1|1362524_1362692_+	lytic enzyme	NA	NA	NA	NA	NA
QBA00922.1|1362948_1363482_-|tail	phage-tail assembly-like protein	tail	A0A291LBG9	Klebsiella_phage	43.0	5.4e-11
QBA00923.1|1363535_1363766_-	lytic enzyme	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
QBA00924.1|1363796_1364450_+	hypothetical protein	NA	A0A0U2I1R6	Escherichia_phage	69.8	3.2e-29
1364439:1364463	attL	ACAACTTCATAGCGCAAAACCACAC	NA	NA	NA	NA
QBA00925.1|1364467_1365079_+|integrase	phage integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	55.0	4.0e-50
QBA00926.1|1365093_1365363_+	Mobile element protein	NA	K7PHK0	Enterobacteria_phage	47.8	2.7e-11
QBA00927.1|1366307_1367108_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00928.1|1367587_1368310_+	invasion-associated secreted protein	NA	NA	NA	NA	NA
QBA00929.1|1368511_1368739_-|tail	phage tail fiber assembly protein	tail	A0A0M4RTP2	Salmonella_phage	85.3	2.1e-28
QBA00930.1|1368860_1369577_-|tail	Phage tail fiber protein	tail	C6ZCZ5	Enterobacteria_phage	78.5	1.1e-22
QBA00931.1|1369719_1372080_-|tail	Phage tail fiber protein	tail	A0A0P0ZBW1	Stx2-converting_phage	67.7	0.0e+00
QBA00932.1|1372073_1372355_-|tail	Phage tail assembly protein	tail	A0A0N7KZA3	Stx2-converting_phage	66.3	1.0e-29
QBA00933.1|1372364_1373060_-|tail	Phage minor tail protein	tail	A0A0K2FJ01	Enterobacteria_phage	66.7	1.0e-89
QBA00934.1|1373386_1373683_+	Superoxide dismutase precursor	NA	Q9MC02	Salmonella_phage	72.2	1.6e-36
QBA00935.1|1373799_1373979_-	Attachment invasion locus protein precursor	NA	NA	NA	NA	NA
QBA00936.1|1374055_1374370_-	hypothetical protein	NA	Q8VNN8	Enterobacteria_phage	49.5	9.9e-21
QBA00937.1|1374577_1375057_-	Phage outer membrane lytic protein Rz	NA	Q56118	Enterobacteria_phage	77.0	1.4e-55
QBA00938.1|1375074_1375524_-	Phage lysozyme	NA	A0A0M4R365	Salmonella_phage	97.3	2.3e-79
QBA00939.1|1375510_1375846_-|holin	Phage holin	holin	A0A0M3ULK9	Salmonella_phage	100.0	4.1e-57
QBA00940.1|1376164_1376437_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00941.1|1376436_1376802_+	PipA protein	NA	Q9MBM0	Phage_Gifsy-2	99.2	7.6e-65
QBA00942.1|1377162_1377612_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00943.1|1377985_1378513_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00944.1|1378606_1379296_-	antiterminator-like protein	NA	I6PDF8	Cronobacter_phage	54.9	2.1e-60
QBA00945.1|1379649_1380249_-	putative bacteriophage protein	NA	A0A0U2RT94	Escherichia_phage	82.9	4.7e-96
QBA00946.1|1380312_1380618_-	phage protein	NA	NA	NA	NA	NA
QBA00947.1|1381073_1381232_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00948.1|1381249_1383229_-	alkyl sulfatase	NA	A0A2P0VMX1	Tetraselmis_virus	46.3	1.9e-162
QBA00949.1|1383895_1384975_+	Mobile element protein	NA	A0A2H4IYC8	uncultured_Caudovirales_phage	52.5	3.0e-101
1384050:1384074	attR	ACAACTTCATAGCGCAAAACCACAC	NA	NA	NA	NA
QBA00950.1|1385357_1385711_-	membrane protein YebY	NA	NA	NA	NA	NA
QBA00951.1|1385727_1386603_-	Copper resistance protein D	NA	NA	NA	NA	NA
QBA00952.1|1386603_1386978_-	Copper resistance protein CopC	NA	NA	NA	NA	NA
QBA00953.1|1387115_1387346_+	DNA polymerase III theta subunit	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
QBA00954.1|1387453_1388110_+	amidohydrolase	NA	NA	NA	NA	NA
QBA00955.1|1388133_1388832_+	Exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
QBA00956.1|1388868_1390920_-	Protease II	NA	NA	NA	NA	NA
QBA00957.1|1391132_1391792_-	inner membrane protein YebE	NA	NA	NA	NA	NA
QBA00958.1|1391885_1392239_-	membrane protein	NA	NA	NA	NA	NA
QBA00959.1|1392306_1392597_-	DNA damage-inducible gene in SOS regulon, dependent on cyclic AMP and H-NS	NA	NA	NA	NA	NA
QBA00960.1|1392727_1393906_+	Phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
QBA00961.1|1394005_1394647_-	4-hydroxy-2-oxoglutarate aldolase	NA	NA	NA	NA	NA
QBA00962.1|1394684_1396496_-	Phosphogluconate dehydratase	NA	NA	NA	NA	NA
QBA00963.1|1396730_1398206_-	Glucose-6-phosphate 1-dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
QBA00964.1|1398547_1399417_+	Phosphogluconate repressor HexR, RpiR family	NA	NA	NA	NA	NA
QBA00965.1|1399540_1400983_+	Pyruvate kinase	NA	NA	NA	NA	NA
QBA00966.1|1401055_1402027_-	Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase	NA	NA	NA	NA	NA
QBA00967.1|1402143_1403463_-	Cell wall endopeptidase, family M23/M37	NA	A8ATH6	Listeria_phage	40.9	2.6e-14
QBA00968.1|1403478_1404423_-	Zinc ABC transporter, periplasmic-binding protein ZnuA	NA	NA	NA	NA	NA
QBA00969.1|1404501_1405257_+	Zinc ABC transporter, ATP-binding protein ZnuC	NA	G3M9Y6	Bacillus_virus	29.4	8.5e-18
QBA00970.1|1405253_1406039_+	Zinc ABC transporter, inner membrane permease protein ZnuB	NA	NA	NA	NA	NA
QBA00971.1|1406117_1407128_-	Holliday junction DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	26.4	2.4e-07
QBA00972.1|1407136_1407748_-	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
QBA00973.1|1408107_1408800_-	membrane protein	NA	NA	NA	NA	NA
QBA00974.1|1409008_1409608_+	hypothetical protein	NA	NA	NA	NA	NA
QBA00975.1|1409609_1410131_-	Crossover junction endodeoxyribonuclease RuvC	NA	G3MA90	Bacillus_virus	35.1	2.6e-10
QBA00976.1|1410167_1410908_-	hypothetical protein	NA	NA	NA	NA	NA
QBA00977.1|1410937_1411378_-	Dihydroneopterin triphosphate pyrophosphohydrolase type 2	NA	NA	NA	NA	NA
QBA00978.1|1411492_1413265_-|tRNA	Aspartyl-tRNA synthetase	tRNA	NA	NA	NA	NA
>prophage 6
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	1586831	1598056	4686022	tail	Salmonella_phage(30.0%)	12	NA	NA
QBA01164.1|1586831_1589444_-	Membrane alanine aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	22.8	6.3e-20
QBA01165.1|1589870_1590062_+	Virulence protein msgA	NA	S4TNM0	Salmonella_phage	95.2	6.2e-26
QBA01166.1|1590332_1591019_+	hypothetical protein	NA	NA	NA	NA	NA
QBA01167.1|1591015_1591195_+	hypothetical protein	NA	NA	NA	NA	NA
QBA01168.1|1591378_1592005_+	Gifsy-2 prophage protein	NA	A0A2H4J5W2	uncultured_Caudovirales_phage	63.2	1.4e-66
QBA01169.1|1592136_1592385_-	Transposase	NA	A0A0P0ZEB3	Stx2-converting_phage	68.8	1.5e-24
QBA01170.1|1592652_1593621_-	Secreted effector protein	NA	Q9MBL9	Phage_Gifsy-2	99.4	3.0e-193
QBA01171.1|1594098_1594680_-|tail	Phage tail fiber	tail	A0A0M4RTP2	Salmonella_phage	89.5	1.7e-95
QBA01172.1|1594679_1596389_-|tail	Phage tail fiber protein	tail	A0A0U2SAV1	Escherichia_phage	66.0	1.5e-91
QBA01173.1|1596385_1597012_-	hypothetical protein	NA	A0A0U2RK03	Escherichia_phage	71.6	3.3e-92
QBA01174.1|1596995_1597625_-	hypothetical protein	NA	A0A0U2RJZ0	Escherichia_phage	65.9	1.6e-75
QBA01175.1|1597645_1598056_+	Gifsy-2 prophage RecT	NA	H6WRX0	Salmonella_phage	100.0	5.0e-33
>prophage 7
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	1669500	1676648	4686022	protease,integrase	Ralstonia_phage(16.67%)	7	1664132:1664146	1675384:1675398
1664132:1664146	attL	GGAAAATCAACGCTG	NA	NA	NA	NA
QBA01230.1|1669500_1669713_+|integrase	integrase	integrase	A0A077KET4	Ralstonia_phage	45.7	1.9e-12
QBA01231.1|1669874_1670072_+	hypothetical protein	NA	NA	NA	NA	NA
QBA01232.1|1670284_1672561_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
QBA01233.1|1672591_1672912_-|protease	ATP-dependent Clp protease adaptor protein ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
QBA01234.1|1673235_1673457_+	Cold shock protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
QBA01235.1|1673586_1675533_-	Macrolide export ATP-binding/permease protein MacB	NA	G9BWD6	Planktothrix_phage	43.1	2.0e-39
1675384:1675398	attR	CAGCGTTGATTTTCC	NA	NA	NA	NA
QBA01236.1|1675529_1676648_-	Macrolide-specific efflux protein MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
>prophage 8
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	2010325	2018229	4686022	transposase	Salmonella_phage(57.14%)	10	NA	NA
QBA01545.1|2010325_2011651_-	Dihydrolipoamide dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	46.3	2.3e-103
QBA01546.1|2012771_2012936_-	cation efflux system protein CusA	NA	NA	NA	NA	NA
QBA01547.1|2013059_2013389_+	Heavy metal sensor histidine kinase	NA	NA	NA	NA	NA
QBA01548.1|2013588_2013834_+	copE1	NA	NA	NA	NA	NA
QBA01549.1|2014256_2014619_+	Bactoprenol-linked glucose translocase	NA	I1TED9	Salmonella_phage	100.0	3.9e-61
QBA01550.1|2014615_2015542_+	Polymyxin resistance protein ArnC, glycosyl transferase	NA	I1TED8	Salmonella_phage	97.0	1.1e-168
QBA01551.1|2015945_2017175_+	membrane protein	NA	B9UDL6	Salmonella_phage	36.0	1.3e-52
QBA01552.1|2017231_2017390_-	hypothetical protein	NA	A0A1W5PUZ7	Salmonella_phage	67.3	8.4e-13
QBA01553.1|2017561_2017780_+	Mobile element protein	NA	U5P4I9	Shigella_phage	78.3	7.8e-17
QBA01554.1|2017956_2018229_+|transposase	transposase	transposase	U5P429	Shigella_phage	86.8	2.8e-32
>prophage 9
CP026713	Salmonella enterica strain FORC_078 chromosome, complete genome	4686022	2069597	2128855	4686022	tRNA,protease,transposase	Bacillus_phage(23.08%)	52	NA	NA
QBA01604.1|2069597_2070515_+|protease	stomatin/prohibitin-family membrane protease subunit	protease	NA	NA	NA	NA
QBA01605.1|2070511_2070964_+|protease	activity regulator of membrane protease YbbK	protease	NA	NA	NA	NA
QBA01606.1|2070964_2071381_-	HTH-type transcriptional regulator cueR	NA	NA	NA	NA	NA
QBA01607.1|2071490_2073992_+	Lead, cadmium, zinc and mercury transporting ATPase	NA	A0A218MNH6	uncultured_virus	37.2	5.1e-112
QBA01608.1|2074145_2074973_+	secreted protein	NA	NA	NA	NA	NA
QBA01609.1|2075058_2075853_+	ligase	NA	NA	NA	NA	NA
QBA01610.1|2076054_2076534_+|tRNA	Cys-tRNA(Pro) deacylase YbaK	tRNA	NA	NA	NA	NA
QBA01611.1|2076650_2078312_-	UDP-sugar hydrolase	NA	NA	NA	NA	NA
QBA01612.1|2078484_2079705_+	Fosmidomycin resistance protein	NA	NA	NA	NA	NA
QBA01613.1|2079919_2081596_+	POTASSIUM/PROTON ANTIPORTER ROSB	NA	NA	NA	NA	NA
QBA01614.1|2081644_2082994_-	inosine-guanosine kinase	NA	NA	NA	NA	NA
QBA01615.1|2083101_2084073_+	Acetyl esterase	NA	L7RDF8	Acanthamoeba_polyphaga_moumouvirus	27.9	1.7e-15
QBA01616.1|2084069_2085032_-	Ferrochelatase, protoheme ferro-lyase	NA	NA	NA	NA	NA
QBA01617.1|2085260_2085905_-	Adenylate kinase	NA	NA	NA	NA	NA
QBA01618.1|2086262_2088137_-	Chaperone protein HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	36.9	1.7e-115
QBA01619.1|2088247_2088853_-	Recombination protein RecR	NA	NA	NA	NA	NA
QBA01620.1|2088852_2089182_-	hypothetical protein	NA	NA	NA	NA	NA
QBA01621.1|2089227_2091156_-	DNA polymerase III subunits gamma and tau	NA	A0A1L2BWV7	Bacteriophage	41.5	2.3e-43
QBA01622.1|2091269_2091821_-	Adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	45.2	1.0e-28
QBA01623.1|2091973_2092351_-	hypothetical protein	NA	NA	NA	NA	NA
QBA01624.1|2092431_2092947_+	Primosomal replication protein N prime prime	NA	NA	NA	NA	NA
QBA01625.1|2092960_2093128_+	inner membrane protein	NA	NA	NA	NA	NA
QBA01626.1|2093197_2094133_+|transposase	transposase	transposase	Q2A0A7	Sodalis_phage	52.1	1.6e-63
QBA01627.1|2094174_2097537_-	Potassium efflux system KefA protein / Small-conductance mechanosensitive channel	NA	NA	NA	NA	NA
QBA01628.1|2097655_2098309_-	Transcription repressor of multidrug efflux pump acrAB operon	NA	NA	NA	NA	NA
QBA01629.1|2098450_2099644_+	Membrane fusion protein of RND family multidrug efflux pump	NA	NA	NA	NA	NA
QBA01630.1|2099666_2102816_+	RND efflux system, inner membrane transporter CmeB	NA	NA	NA	NA	NA
QBA01631.1|2103311_2103686_+	hypothetical protein	NA	NA	NA	NA	NA
QBA01632.1|2103713_2103932_+	hemolysin expression modulating protein	NA	NA	NA	NA	NA
QBA01633.1|2104110_2104662_+	Maltose O-acetyltransferase	NA	NA	NA	NA	NA
QBA01634.1|2104779_2105250_+	inner membrane protein	NA	NA	NA	NA	NA
QBA01635.1|2105451_2105712_-	LSU ribosomal protein L31p	NA	NA	NA	NA	NA
QBA01636.1|2105936_2107487_+	Uncharacterized protein ylaB	NA	NA	NA	NA	NA
QBA01637.1|2107794_2108106_+	methylated-DNA--protein-cysteine methyltransferase-related protein	NA	NA	NA	NA	NA
QBA01638.1|2108138_2108708_-	Glycoprotein-polysaccharide metabolism	NA	NA	NA	NA	NA
QBA01639.1|2108922_2109783_+	Acyl-CoA thioesterase II	NA	NA	NA	NA	NA
QBA01640.1|2109882_2111169_-	Ammonium transporter	NA	NA	NA	NA	NA
QBA01641.1|2111200_2111539_-	Nitrogen regulatory protein P-II, glnK	NA	NA	NA	NA	NA
QBA01642.1|2111751_2113533_-	multidrug transporter membrane ATP-binding component	NA	W8CYL7	Bacillus_phage	26.9	5.4e-39
QBA01643.1|2113525_2115298_-	ATP-binding component	NA	W8CYL7	Bacillus_phage	29.8	4.7e-51
QBA01644.1|2115338_2115797_-	HTH-type transcriptional regulator ybaO	NA	NA	NA	NA	NA
QBA01645.1|2115912_2116965_+	cysteine synthase	NA	NA	NA	NA	NA
QBA01646.1|2117014_2117833_-	HMP-PP hydrolase (pyridoxal phosphatase) Cof	NA	NA	NA	NA	NA
QBA01647.1|2117933_2119634_+	Oligopeptide ABC transporter, periplasmic oligopeptide-bind	NA	NA	NA	NA	NA
QBA01648.1|2119698_2120394_+	Queuosine Biosynthesis QueC ATPase	NA	A0A2H4J8Q7	uncultured_Caudovirales_phage	68.4	1.2e-87
QBA01649.1|2120499_2120898_-	4-hydroxybenzoyl-CoA thioesterase family active site	NA	NA	NA	NA	NA
QBA01650.1|2121001_2121376_-	membrane protein	NA	NA	NA	NA	NA
QBA01651.1|2121525_2123397_-	Peptidyl-prolyl cis-trans isomerase PpiD	NA	NA	NA	NA	NA
QBA01652.1|2123687_2123960_-	DNA-binding protein HU-beta	NA	A7KV42	Bacillus_phage	58.4	1.9e-20
QBA01653.1|2124168_2126523_-|protease	ATP-dependent protease La	protease	A0A0R6PGP8	Moraxella_phage	52.5	1.6e-224
QBA01654.1|2126708_2127980_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	56.2	1.2e-130
QBA01655.1|2128231_2128855_-|protease	Clp protease	protease	A0A223W000	Agrobacterium_phage	63.9	2.9e-64
