The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	940476	989551	5061273	tail,protease,tRNA	Enterobacteria_phage(76.47%)	59	NA	NA
QAY48364.1|940476_944583_+	DNA translocase FtsK	NA	A0A218M9A2	Mycobacterium_phage	48.7	1.2e-86
QAY48365.1|944741_945353_+	Outer-membrane lipoprotein carrier protein	NA	NA	NA	NA	NA
QAY48366.1|945363_946707_+	Replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.8	2.1e-80
QAY48367.1|946797_948090_+|tRNA	Serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	48.2	1.5e-94
QAY48368.1|948395_948536_-	hypothetical protein	NA	A0A0A7NPZ4	Enterobacteria_phage	100.0	7.0e-19
QAY48369.1|948727_948988_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48370.1|949030_950140_-	hypothetical protein	NA	A0A0A7NQ97	Enterobacteria_phage	94.6	2.8e-195
QAY48371.1|950297_951482_+|tail	Putative prophage major tail sheath protein	tail	A0A0A7NV69	Enterobacteria_phage	97.2	5.4e-221
QAY48372.1|951481_951994_+	hypothetical protein	NA	A0A0A7NPV8	Enterobacteria_phage	97.1	1.5e-90
QAY48373.1|952049_952424_+	hypothetical protein	NA	A0A0A7NPZ0	Enterobacteria_phage	71.5	5.8e-36
QAY48374.1|952574_955382_+	hypothetical protein	NA	A0A0A7NRZ9	Enterobacteria_phage	90.4	0.0e+00
QAY48375.1|955394_955883_+	hypothetical protein	NA	A0A0A7NV65	Enterobacteria_phage	99.4	1.4e-85
QAY48376.1|955909_956509_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	86.3	2.0e-86
QAY48377.1|957048_957663_-|tail	Prophage tail fiber assembly protein TfaE	tail	Q9MCR5	Enterobacteria_phage	62.1	3.5e-62
QAY48378.1|957662_957872_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48379.1|957877_959485_-	hypothetical protein	NA	M1TAS6	Escherichia_phage	43.7	1.8e-94
QAY48380.1|959481_960090_-	hypothetical protein	NA	A0A0F7LA36	Escherichia_phage	74.4	1.0e-85
QAY48381.1|960082_960979_-	hypothetical protein	NA	A0A0A7NPY5	Enterobacteria_phage	98.0	5.1e-155
QAY48382.1|960982_961333_-	hypothetical protein	NA	A0A0A7NQ90	Enterobacteria_phage	99.1	6.0e-59
QAY48383.1|961329_961911_-	hypothetical protein	NA	A0A0A7NRZ3	Enterobacteria_phage	98.4	2.5e-102
QAY48384.1|961907_962552_-	hypothetical protein	NA	A0A0A7NV60	Enterobacteria_phage	100.0	1.1e-114
QAY48385.1|962535_963003_-	hypothetical protein	NA	A0A0A7NPU6	Enterobacteria_phage	95.5	2.7e-83
QAY48386.1|963026_964904_-	putative 9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	H6WZJ9	Escherichia_phage	82.2	3.0e-306
QAY48387.1|965042_965438_-	hypothetical protein	NA	A0A0A7NPY2	Enterobacteria_phage	93.3	1.0e-59
QAY48388.1|965434_965827_-	hypothetical protein	NA	A0A0A7NQ86	Enterobacteria_phage	96.9	1.9e-69
QAY48389.1|965823_966147_-	hypothetical protein	NA	A0A0A7NRY9	Enterobacteria_phage	93.5	1.7e-47
QAY48390.1|966149_966350_-	hypothetical protein	NA	A0A0A7NV57	Enterobacteria_phage	100.0	3.5e-32
QAY48391.1|966349_966844_-	hypothetical protein	NA	A0A0A7NPU2	Enterobacteria_phage	97.6	5.1e-88
QAY48392.1|966945_967746_-	hypothetical protein	NA	A0A0A7NPX9	Enterobacteria_phage	96.6	3.3e-137
QAY48393.1|967791_968844_-	hypothetical protein	NA	A0A0A7NQ82	Enterobacteria_phage	94.6	7.5e-190
QAY48394.1|968867_969704_-	hypothetical protein	NA	A0A0A7NRY7	Enterobacteria_phage	98.9	1.5e-148
QAY48395.1|969858_971610_+	hypothetical protein	NA	A0A0A7NV54	Enterobacteria_phage	98.3	0.0e+00
QAY48396.1|971609_972656_+	hypothetical protein	NA	A0A0A7NPT9	Enterobacteria_phage	99.7	2.2e-202
QAY48397.1|972670_973195_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48398.1|973781_974045_-	hypothetical protein	NA	A0A2P0P958	Salmonella_phage	73.6	6.7e-31
QAY48399.1|974046_974487_-	hypothetical protein	NA	A0A2I6PID2	Escherichia_phage	50.3	1.5e-19
QAY48400.1|974488_974803_-	hypothetical protein	NA	A0A0A7NRY2	Enterobacteria_phage	94.2	5.5e-48
QAY48401.1|974799_975132_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	A0A0A7NV51	Enterobacteria_phage	96.4	5.5e-54
QAY48402.1|975195_975507_-	hypothetical protein	NA	A0A0A7NPT5	Enterobacteria_phage	95.1	4.2e-48
QAY48403.1|975511_976471_-	Plasmid segregation protein ParM	NA	A0A0A7NPX4	Enterobacteria_phage	99.7	9.9e-181
QAY48404.1|976547_979370_-	hypothetical protein	NA	A0A0A7NQ77	Enterobacteria_phage	97.1	0.0e+00
QAY48405.1|979376_979742_-	hypothetical protein	NA	A0A0A7NRY1	Enterobacteria_phage	96.7	1.9e-60
QAY48406.1|979738_980359_-	hypothetical protein	NA	S5MQL6	Escherichia_phage	39.0	3.5e-09
QAY48407.1|980412_981243_-	hypothetical protein	NA	A0A0A7NPW9	Enterobacteria_phage	99.3	7.4e-132
QAY48408.1|981239_981443_-	hypothetical protein	NA	A0A0A7NQ74	Enterobacteria_phage	97.0	2.4e-28
QAY48409.1|981439_981658_-	hypothetical protein	NA	A0A0A7NRX6	Enterobacteria_phage	63.8	5.2e-13
QAY48410.1|981654_981858_-	hypothetical protein	NA	A0A0A7NPS8	Enterobacteria_phage	82.1	5.5e-25
QAY48411.1|981881_982292_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48412.1|982360_982498_-	hypothetical protein	NA	A0A0A7NPW7	Enterobacteria_phage	100.0	1.9e-08
QAY48413.1|982494_982737_-	hypothetical protein	NA	A0A0A7NQ71	Enterobacteria_phage	100.0	2.3e-38
QAY48414.1|982748_983027_-	hypothetical protein	NA	A0A0A7NRX5	Enterobacteria_phage	79.3	3.1e-34
QAY48415.1|983037_983388_-	hypothetical protein	NA	A0A0A7NV42	Enterobacteria_phage	94.0	2.8e-56
QAY48416.1|983525_983717_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48417.1|983723_984146_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48418.1|984150_984672_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48419.1|984775_985117_+	hypothetical protein	NA	Q1JS21	Enterobacteria_phage	47.1	2.5e-17
QAY48420.1|985186_986179_+	Tyrosine recombinase XerD	NA	A0A0F7LBR0	Escherichia_phage	56.5	2.0e-104
QAY48421.1|986478_988923_+	Dimethyl sulfoxide reductase DmsA	NA	A0A077SK27	Escherichia_phage	49.8	6.6e-221
QAY48422.1|988933_989551_+	Anaerobic dimethyl sulfoxide reductase chain B	NA	A0A077SL61	Escherichia_phage	60.6	5.0e-77
>prophage 2
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	999949	1039451	5061273	tail	Burkholderia_virus(45.0%)	57	NA	NA
QAY48431.1|999949_1001038_+	Phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	46.8	2.7e-81
QAY48432.1|1001108_1002392_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
QAY48433.1|1002647_1003220_-	DNA-invertase hin	NA	A0A0A7NPV4	Enterobacteria_phage	85.2	4.6e-85
QAY48434.1|1003291_1003753_+	hypothetical protein	NA	A0A0F7LCR3	Escherichia_phage	50.0	3.9e-34
QAY48435.1|1003759_1004374_-|tail	Prophage tail fiber assembly protein TfaE	tail	Q9MCR5	Enterobacteria_phage	60.5	2.5e-60
QAY48436.1|1004373_1004856_-	hypothetical protein	NA	K7P7Q7	Enterobacteria_phage	44.7	7.5e-28
QAY48437.1|1004896_1006144_-	hypothetical protein	NA	A0A0K2FIZ6	Escherichia_phage	43.7	2.0e-40
QAY48438.1|1006146_1006725_-	hypothetical protein	NA	A4JWL7	Burkholderia_virus	66.8	1.7e-66
QAY48439.1|1006717_1007821_-	hypothetical protein	NA	Q6QI99	Burkholderia_phage	55.2	1.4e-106
QAY48440.1|1007811_1008159_-	hypothetical protein	NA	Q6QIA0	Burkholderia_phage	62.4	5.9e-35
QAY48441.1|1008213_1008810_-	hypothetical protein	NA	A4JWL4	Burkholderia_virus	45.2	3.2e-36
QAY48442.1|1008806_1009961_-	hypothetical protein	NA	Q6QIA2	Burkholderia_phage	47.6	1.9e-85
QAY48443.1|1009948_1010161_-	hypothetical protein	NA	Q6QIA3	Burkholderia_phage	57.1	1.2e-17
QAY48444.1|1010160_1011045_-	hypothetical protein	NA	A4JWL1	Burkholderia_virus	47.9	6.8e-51
QAY48445.1|1011044_1013996_-	hypothetical protein	NA	A4JWL0	Burkholderia_virus	29.9	9.8e-86
QAY48446.1|1014153_1014489_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48447.1|1014586_1014868_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48448.1|1014870_1015392_-	hypothetical protein	NA	A4JWK6	Burkholderia_virus	67.6	1.8e-67
QAY48449.1|1015391_1016819_-|tail	Putative prophage major tail sheath protein	tail	A4JWK5	Burkholderia_virus	76.3	4.5e-214
QAY48450.1|1016808_1017060_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48451.1|1017059_1017524_-	hypothetical protein	NA	Q6QIB2	Burkholderia_phage	51.7	9.1e-39
QAY48452.1|1017523_1017970_-	hypothetical protein	NA	A4JWK2	Burkholderia_virus	52.3	2.2e-34
QAY48453.1|1017971_1018310_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48454.1|1018319_1019273_-	hypothetical protein	NA	A4JWK0	Burkholderia_virus	43.8	3.4e-64
QAY48455.1|1019287_1020403_-	hypothetical protein	NA	A4JWJ9	Burkholderia_virus	51.6	9.4e-98
QAY48456.1|1020617_1021076_-	hypothetical protein	NA	Q6QIB8	Burkholderia_phage	44.8	2.6e-30
QAY48457.1|1021078_1021900_-	hypothetical protein	NA	A4JWJ6	Burkholderia_virus	61.9	1.8e-98
QAY48458.1|1021880_1023377_-	hypothetical protein	NA	A4JWJ5	Burkholderia_virus	59.0	9.7e-167
QAY48459.1|1023376_1024972_-	hypothetical protein	NA	A4JWJ4	Burkholderia_virus	62.8	6.5e-185
QAY48460.1|1024968_1025514_-	hypothetical protein	NA	A4JWJ3	Burkholderia_virus	67.6	9.3e-59
QAY48461.1|1025513_1025825_-	hypothetical protein	NA	A0A0S4L0A3	Pseudomonas_phage	62.6	9.4e-32
QAY48462.1|1025824_1026151_-	hypothetical protein	NA	Q6QIC4	Burkholderia_phage	48.6	1.1e-17
QAY48463.1|1026147_1026798_-	hypothetical protein	NA	J9SVN7	Pseudomonas_phage	32.9	2.8e-09
QAY48464.1|1026781_1027489_-	Membrane-bound lytic murein transglycosylase F	NA	Q5ZQZ1	Pseudomonas_phage	58.2	3.1e-62
QAY48465.1|1027524_1027875_-	hypothetical protein	NA	A4JWP3	Burkholderia_virus	53.0	1.5e-22
QAY48466.1|1028005_1028734_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48467.1|1028709_1029111_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48468.1|1029112_1029328_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48469.1|1029518_1030283_+	Modification methylase DpnIIA	NA	A2I2Y7	Vibrio_virus	64.4	5.2e-100
QAY48470.1|1030399_1030756_-	HTH-type transcriptional regulator ImmR	NA	NA	NA	NA	NA
QAY48471.1|1030849_1031038_+	hypothetical protein	NA	Q5ZQZ9	Pseudomonas_phage	71.0	3.9e-17
QAY48472.1|1031090_1031399_+	hypothetical protein	NA	Q5ZR02	Pseudomonas_phage	55.9	2.7e-23
QAY48473.1|1031409_1032330_+	hypothetical protein	NA	A4JWN3	Burkholderia_virus	56.2	1.6e-74
QAY48474.1|1032329_1032647_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48475.1|1032662_1034432_+	hypothetical protein	NA	A4JWN2	Burkholderia_virus	69.4	1.5e-227
QAY48476.1|1034442_1035609_+	hypothetical protein	NA	A4JWN1	Burkholderia_virus	59.4	2.2e-121
QAY48477.1|1035611_1035881_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48478.1|1035908_1036439_+	hypothetical protein	NA	L7P7T1	Pseudomonas_phage	66.7	1.2e-58
QAY48479.1|1036536_1036731_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48480.1|1036727_1037000_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48481.1|1037009_1037306_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48482.1|1037320_1037536_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48483.1|1037532_1038216_+	hypothetical protein	NA	A0A2P9JZH4	Alteromonadaceae_phage	36.1	1.1e-32
QAY48484.1|1038212_1038443_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48485.1|1038432_1038639_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48486.1|1038640_1039090_+	hypothetical protein	NA	A4JWM5	Burkholderia_virus	45.1	6.1e-24
QAY48487.1|1039061_1039451_+	hypothetical protein	NA	Q6QIE8	Burkholderia_phage	54.2	1.5e-31
>prophage 3
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	1254009	1264375	5061273		Enterobacteria_phage(50.0%)	15	NA	NA
QAY48692.1|1254009_1255260_+	Isocitrate dehydrogenase [NADP]	NA	Q77Z09	Phage_21	100.0	3.8e-23
QAY48693.1|1255373_1256516_-	hypothetical protein	NA	Q77Z02	Phage_21	100.0	3.6e-206
QAY48694.1|1256505_1256742_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48695.1|1256881_1257121_-	hypothetical protein	NA	M1FPC8	Enterobacteria_phage	96.2	4.7e-39
QAY48696.1|1257104_1257431_-	hypothetical protein	NA	A5VWB6	Enterobacteria_phage	95.7	9.8e-48
QAY48697.1|1258206_1258389_-	hypothetical protein	NA	A0A1U8QQC1	Enterobacteria_phage	98.3	1.8e-27
QAY48698.1|1258385_1259066_-	hypothetical protein	NA	A0A0P0ZCD4	Stx2-converting_phage	100.0	1.6e-132
QAY48699.1|1259062_1259848_-	hypothetical protein	NA	A0A1I9LJN0	Stx_converting_phage	100.0	6.3e-149
QAY48700.1|1259853_1260150_-	hypothetical protein	NA	A0A1I9LJN1	Stx_converting_phage	98.0	8.9e-48
QAY48701.1|1260225_1260432_-	Killing protein KilR	NA	K7P6H3	Enterobacteria_phage	85.3	3.2e-28
QAY48702.1|1261027_1261783_-	HTH-type transcriptional regulator PrtR	NA	Q76H56	Enterobacteria_phage	75.0	1.4e-92
QAY48703.1|1261821_1262052_+	hypothetical protein	NA	A0A2H4FNF3	Salmonella_phage	68.0	1.5e-21
QAY48704.1|1262121_1262661_+	hypothetical protein	NA	K7PJT7	Enterobacteria_phage	67.0	2.6e-61
QAY48705.1|1262672_1263677_+	hypothetical protein	NA	A0A0M5M7Y1	Salmonella_phage	64.1	8.7e-111
QAY48706.1|1263673_1264375_+	hypothetical protein	NA	M1FJ72	Enterobacteria_phage	97.0	1.5e-125
>prophage 4
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	1270416	1297261	5061273		Enterobacteria_phage(60.61%)	34	NA	NA
QAY48708.1|1270416_1270872_+	hypothetical protein	NA	I6PD71	Cronobacter_phage	66.9	1.6e-59
QAY48709.1|1270871_1271042_+	hypothetical protein	NA	K7P7K0	Enterobacteria_phage	69.8	2.4e-13
QAY48710.1|1271034_1271325_+	hypothetical protein	NA	K7PGZ6	Enterobacteria_phage	95.8	2.3e-48
QAY48711.1|1271321_1271684_+	Crossover junction endodeoxyribonuclease RusA	NA	K7PM48	Enterobacteria_phage	95.7	1.6e-59
QAY48712.1|1271683_1271821_+	hypothetical protein	NA	K7PHH3	Enterobacteria_phage	69.8	1.4e-08
QAY48713.1|1271817_1272507_+	hypothetical protein	NA	I6PDF8	Cronobacter_phage	48.5	4.9e-57
QAY48714.1|1272828_1273134_+	hypothetical protein	NA	A0A286N2Q5	Klebsiella_phage	87.6	7.0e-40
QAY48715.1|1273120_1273597_+	hypothetical protein	NA	K7PKV2	Enterobacteria_phage	94.9	7.3e-84
QAY48716.1|1273593_1274055_+	hypothetical protein	NA	A0A0K2FJD0	Enterobacteria_phage	97.4	2.7e-75
QAY48717.1|1274086_1274380_-	hypothetical protein	NA	K7PL54	Enterobacteria_phage	92.8	7.0e-45
QAY48718.1|1274860_1275187_+	hypothetical protein	NA	H6WZK5	Escherichia_phage	72.2	3.7e-39
QAY48719.1|1275309_1275663_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48720.1|1276139_1276685_+	hypothetical protein	NA	A0A0K2FIG2	Enterobacteria_phage	98.3	6.8e-94
QAY48721.1|1276659_1278585_+	hypothetical protein	NA	A0A0K2FJ14	Enterobacteria_phage	99.1	0.0e+00
QAY48722.1|1278581_1278788_+	hypothetical protein	NA	A0A2R9YJL2	Escherichia_phage	100.0	5.8e-30
QAY48723.1|1278784_1280386_+	hypothetical protein	NA	A0A0K2FJC0	Enterobacteria_phage	98.9	1.4e-309
QAY48724.1|1280366_1281686_+	Putative signal peptide peptidase SppA	NA	A0A2I6TC87	Escherichia_phage	97.7	1.1e-230
QAY48725.1|1281695_1282028_+	hypothetical protein	NA	A0A2R9YJN3	Escherichia_phage	99.1	3.8e-55
QAY48726.1|1282083_1283109_+	hypothetical protein	NA	C6ZCY2	Enterobacteria_phage	99.4	7.8e-192
QAY48727.1|1283150_1283549_+	hypothetical protein	NA	A0A0K2FIR1	Enterobacteria_phage	98.5	1.0e-62
QAY48728.1|1283560_1283914_+	hypothetical protein	NA	A0A2R9YJJ5	Escherichia_phage	98.3	2.2e-61
QAY48729.1|1283925_1284504_+	hypothetical protein	NA	A0A2R9YJK4	Escherichia_phage	92.7	5.9e-80
QAY48730.1|1284500_1284896_+	hypothetical protein	NA	A0A2R9YJI2	Escherichia_phage	98.5	2.9e-70
QAY48731.1|1284903_1285644_+	hypothetical protein	NA	A0A2I6TC77	Escherichia_phage	98.0	1.6e-130
QAY48732.1|1285659_1286082_+	hypothetical protein	NA	A0A0K2FIQ8	Enterobacteria_phage	94.3	2.2e-68
QAY48733.1|1286063_1286498_+	hypothetical protein	NA	A0A0K2FJB3	Enterobacteria_phage	100.0	6.9e-65
QAY48734.1|1286490_1289052_+	hypothetical protein	NA	A0A0K2FI43	Enterobacteria_phage	98.4	0.0e+00
QAY48735.1|1289048_1289378_+	hypothetical protein	NA	A0A0K2FIE9	Enterobacteria_phage	99.1	2.8e-58
QAY48736.1|1289377_1290076_+	hypothetical protein	NA	A0A0K2FJ01	Enterobacteria_phage	99.6	5.1e-134
QAY48737.1|1290224_1290824_+	hypothetical protein	NA	K7PLW1	Enterobacteria_phage	97.5	1.5e-118
QAY48738.1|1290820_1291363_+	hypothetical protein	NA	A0A291AWV5	Escherichia_phage	84.1	1.3e-76
QAY48739.1|1291423_1294906_+	hypothetical protein	NA	A0A291AWT4	Escherichia_phage	90.3	0.0e+00
QAY48740.1|1294964_1296986_+	hypothetical protein	NA	A0A0E3M0V5	Enterobacteria_phage	72.3	7.2e-181
QAY48741.1|1296982_1297261_+	hypothetical protein	NA	A0A0E3JSQ1	Enterobacteria_phage	55.4	9.9e-25
>prophage 5
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	1439183	1495352	5061273		Enterobacteria_phage(27.45%)	65	NA	NA
QAY48891.1|1439183_1441655_-	Exodeoxyribonuclease 8	NA	A0A192Y6E0	Salmonella_phage	56.0	5.7e-55
QAY48892.1|1441747_1441939_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48893.1|1441935_1442124_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48894.1|1442689_1442908_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48895.1|1442937_1443066_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48896.1|1443067_1443304_-	hypothetical protein	NA	M4QQ57	Salicola_phage	51.1	1.4e-06
QAY48897.1|1443495_1444212_-	putative HTH-type transcriptional regulator	NA	H9C160	Pectobacterium_phage	42.0	1.7e-52
QAY48898.1|1444261_1444477_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48899.1|1444473_1444899_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48900.1|1444996_1445884_+	hypothetical protein	NA	S5FM81	Shigella_phage	55.7	7.3e-61
QAY48901.1|1445890_1446637_+	DNA replication protein DnaC	NA	A0A088CBP4	Shigella_phage	83.8	4.0e-113
QAY48902.1|1446658_1447429_+	hypothetical protein	NA	A0A0U2SAW4	Escherichia_phage	64.5	1.6e-80
QAY48903.1|1447444_1447870_+	hypothetical protein	NA	A0A0U2QQN3	Escherichia_phage	94.0	2.2e-63
QAY48904.1|1448044_1448710_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48905.1|1448890_1449103_+	hypothetical protein	NA	A0A0U2QV81	Escherichia_phage	90.0	5.2e-26
QAY48906.1|1449544_1450600_+	hypothetical protein	NA	A0A291AWV9	Escherichia_phage	48.4	4.0e-90
QAY48907.1|1450600_1450981_+	Crossover junction endodeoxyribonuclease RusA	NA	V5URS4	Shigella_phage	64.5	2.9e-35
QAY48908.1|1450977_1451799_+	Chaperone protein DnaJ	NA	K7P7B9	Enterobacteria_phage	60.1	1.7e-80
QAY48909.1|1452025_1452223_+	hypothetical protein	NA	Q9MC00	Enterobacteria_phage	98.5	6.1e-29
QAY48910.1|1452374_1453424_+	Modification methylase DpnIIB	NA	A0A0N7KZF8	Stx2-converting_phage	95.4	4.4e-198
QAY48911.1|1454637_1454973_-	Anti-adapter protein IraM	NA	Q8HAJ1	Enterobacteria_phage	74.8	5.2e-44
QAY48912.1|1455233_1457087_+	putative 9-O-acetyl-N-acetylneuraminic acid deacetylase	NA	Q08JA2	Stx2-converting_phage	90.3	0.0e+00
QAY48913.1|1457237_1457453_+	hypothetical protein	NA	G9L6J5	Escherichia_phage	100.0	9.0e-34
QAY48914.1|1457457_1457802_+	hypothetical protein	NA	K7PGU6	Enterobacteria_phage	95.2	2.8e-37
QAY48915.1|1457767_1458040_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48916.1|1458145_1458679_+	Lysozyme RrrD	NA	Q6H9V6	Enterobacteria_phage	95.5	4.8e-100
QAY48917.1|1458971_1459103_+	hypothetical protein	NA	A0A0P0ZG36	Escherichia_phage	74.4	7.5e-07
QAY48918.1|1459321_1459816_+	hypothetical protein	NA	Q9ZXB6	Enterobacteria_phage	87.7	1.7e-72
QAY48919.1|1459812_1460028_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48920.1|1460226_1460427_-	hypothetical protein	NA	H6WZK6	Escherichia_phage	98.5	4.3e-30
QAY48921.1|1460468_1460834_+	hypothetical protein	NA	B6ETE5	Enterobacteria_phage	93.4	2.5e-60
QAY48922.1|1461124_1461688_+	hypothetical protein	NA	A0A0P0ZD56	Stx2-converting_phage	92.0	1.6e-82
QAY48923.1|1461684_1463346_+	hypothetical protein	NA	B6DZ98	Enterobacteria_phage	98.7	0.0e+00
QAY48924.1|1463409_1465347_+	hypothetical protein	NA	H6WZL0	Escherichia_phage	100.0	0.0e+00
QAY48925.1|1465391_1465613_+	hypothetical protein	NA	B6DZA0	Enterobacteria_phage	100.0	5.8e-36
QAY48926.1|1465558_1468144_+	hypothetical protein	NA	A0A0P0ZDD0	Stx2-converting_phage	100.0	0.0e+00
QAY48927.1|1468140_1468467_+	hypothetical protein	NA	A0A0P0ZBH1	Stx2-converting_phage	100.0	9.2e-54
QAY48928.1|1468476_1468827_+	hypothetical protein	NA	A0A0P0ZB28	Stx2-converting_phage	100.0	1.6e-59
QAY48929.1|1468823_1469270_+	hypothetical protein	NA	A0A0N7KZI9	Stx2-converting_phage	100.0	5.2e-76
QAY48930.1|1469266_1469611_+	hypothetical protein	NA	A0A0P0ZC17	Stx2-converting_phage	100.0	1.4e-57
QAY48931.1|1469677_1470394_+	hypothetical protein	NA	A0A0P0ZDV1	Stx2-converting_phage	99.6	3.6e-127
QAY48932.1|1470408_1470783_+	hypothetical protein	NA	A0A0P0ZE84	Stx2-converting_phage	99.2	1.7e-64
QAY48933.1|1470878_1471088_+	hypothetical protein	NA	H6WZM0	Escherichia_phage	100.0	1.5e-33
QAY48934.1|1471135_1474378_+	hypothetical protein	NA	A0A0P0ZCJ4	Stx2-converting_phage	91.6	0.0e+00
QAY48935.1|1474370_1474712_+	hypothetical protein	NA	A0A0P0ZBQ8	Stx2-converting_phage	95.6	9.0e-60
QAY48936.1|1474711_1475410_+	hypothetical protein	NA	B6DZB1	Enterobacteria_phage	97.4	5.8e-130
QAY48937.1|1475420_1476164_+	hypothetical protein	NA	Q6H9T4	Enterobacteria_phage	97.6	4.3e-147
QAY48938.1|1476160_1476742_+	hypothetical protein	NA	H6WZM5	Escherichia_phage	97.4	1.3e-90
QAY48939.1|1477084_1480558_+	hypothetical protein	NA	A0A0P0ZBW1	Stx2-converting_phage	89.7	0.0e+00
QAY48940.1|1480625_1481084_+	Outer membrane protein X	NA	Q9EV15	Enterobacteria_phage	89.0	9.5e-65
QAY48941.1|1481198_1482740_+	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	46.4	1.7e-129
QAY48942.1|1482754_1483501_+	Insertion sequence IS5376 putative ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QAY48943.1|1484459_1485197_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48944.1|1485438_1486869_+	hypothetical protein	NA	A0A0F7LDR4	Escherichia_phage	47.9	3.8e-112
QAY48945.1|1486884_1487412_+	hypothetical protein	NA	A0A0C4UR05	Shigella_phage	77.7	8.4e-73
QAY48946.1|1487442_1487976_-	hypothetical protein	NA	A0A077SL44	Escherichia_phage	70.1	1.8e-67
QAY48947.1|1487977_1488763_-	hypothetical protein	NA	Q858V4	Yersinia_virus	77.8	1.3e-109
QAY48948.1|1488935_1489025_+	hypothetical protein	NA	NA	NA	NA	NA
QAY48949.1|1489371_1490028_-	hypothetical protein	NA	NA	NA	NA	NA
QAY48950.1|1490096_1490366_+	hypothetical protein	NA	K7PMH7	Enterobacteria_phage	79.4	9.3e-20
QAY48951.1|1490480_1490651_+	hypothetical protein	NA	A0A0U2RK60	Escherichia_phage	62.5	9.4e-10
QAY48952.1|1490777_1491335_-	hypothetical protein	NA	Q8H9L9	Vibrio_phage	63.8	4.2e-30
QAY48953.1|1491982_1492789_-	Tryptophan synthase alpha chain	NA	NA	NA	NA	NA
QAY48954.1|1492788_1493982_-	Tryptophan synthase beta chain	NA	NA	NA	NA	NA
QAY48955.1|1493993_1495352_-	Tryptophan biosynthesis protein TrpCF	NA	A0A0P0IR83	Acinetobacter_phage	41.2	3.9e-37
>prophage 6
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	1721680	1730507	5061273		Escherichia_phage(66.67%)	10	NA	NA
QAY49154.1|1721680_1722895_-	Starvation-sensing protein RspA	NA	Q6A202	Oenococcus_phage	29.2	8.2e-47
QAY49155.1|1723100_1723427_-	hypothetical protein	NA	A0A218MNG8	uncultured_virus	55.6	9.9e-24
QAY49156.1|1723561_1723903_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49157.1|1723937_1724498_+	Spermidine N(1)-acetyltransferase	NA	NA	NA	NA	NA
QAY49158.1|1724500_1725247_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49159.1|1725318_1725624_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49160.1|1725822_1728249_+	Putative dimethyl sulfoxide reductase chain YnfE	NA	A0A077SK27	Escherichia_phage	49.2	1.7e-213
QAY49161.1|1728336_1729071_+	putative dimethyl sulfoxide reductase chain YnfF	NA	A0A077SK27	Escherichia_phage	48.3	1.4e-46
QAY49162.1|1729067_1729805_+	putative dimethyl sulfoxide reductase chain YnfF	NA	A0A077SK27	Escherichia_phage	41.1	4.6e-45
QAY49163.1|1729889_1730507_+	Anaerobic dimethyl sulfoxide reductase chain B	NA	A0A077SL61	Escherichia_phage	59.6	9.5e-76
>prophage 7
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	2044661	2070636	5061273	tail	Escherichia_phage(36.36%)	36	NA	NA
QAY49469.1|2044661_2045081_-	hypothetical protein	NA	G8C7Q7	Escherichia_phage	68.8	1.8e-49
QAY49470.1|2045247_2045412_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49471.1|2045518_2046292_-	hypothetical protein	NA	R9TNM7	Vibrio_phage	30.7	9.2e-28
QAY49472.1|2046681_2047071_-	hypothetical protein	NA	E5FFG4	Burkholderia_phage	37.9	1.0e-14
QAY49473.1|2047106_2048747_-	hypothetical protein	NA	A0A2I7R3J9	Vibrio_phage	29.3	1.2e-19
QAY49474.1|2048855_2049137_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49475.1|2049149_2049662_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49476.1|2049679_2051182_-|tail	Putative prophage major tail sheath protein	tail	R9TMQ0	Vibrio_phage	33.5	5.5e-69
QAY49477.1|2051178_2051568_-	hypothetical protein	NA	A0A2H4EXG4	Aeromonas_phage	30.8	9.4e-05
QAY49478.1|2051567_2052752_-	hypothetical protein	NA	J9QDX3	Clostridium_phage	35.2	2.5e-16
QAY49479.1|2052744_2053371_-	hypothetical protein	NA	A0A193GYD1	Enterobacter_phage	38.8	2.0e-25
QAY49480.1|2053373_2054294_-	hypothetical protein	NA	D5LGZ3	Escherichia_phage	47.8	6.4e-68
QAY49481.1|2054290_2054680_-	hypothetical protein	NA	D4HTV2	Vibrio_phage	51.6	2.1e-20
QAY49482.1|2054634_2055537_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49483.1|2055517_2056054_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49484.1|2056050_2056731_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49485.1|2056762_2057143_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49486.1|2057139_2057559_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49487.1|2057593_2058628_-	hypothetical protein	NA	A0A2I6TCE5	Escherichia_phage	56.5	6.6e-106
QAY49488.1|2058686_2059016_-	hypothetical protein	NA	A0A2R9YJN3	Escherichia_phage	39.5	2.0e-08
QAY49489.1|2059015_2060323_-	Putative signal peptide peptidase SppA	NA	A0A2I6TC87	Escherichia_phage	53.7	4.9e-106
QAY49490.1|2060322_2061897_-	hypothetical protein	NA	E4WL21	Enterobacteria_phage	64.0	8.6e-190
QAY49491.1|2061893_2062127_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49492.1|2062126_2064007_-	hypothetical protein	NA	A0A1I9KF19	Aeromonas_phage	53.2	1.1e-191
QAY49493.1|2063975_2064542_-	hypothetical protein	NA	A0A1I9KFT4	Aeromonas_phage	46.2	2.9e-31
QAY49494.1|2064910_2065156_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49495.1|2065417_2065897_-	hypothetical protein	NA	A0A222YWL8	Escherichia_phage	68.8	4.6e-62
QAY49496.1|2065896_2066169_-	hypothetical protein	NA	A0A0A0YPY6	Escherichia_phage	42.9	9.8e-09
QAY49497.1|2066168_2066552_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49498.1|2066664_2067336_-	hypothetical protein	NA	Q7Y3X2	Yersinia_phage	33.5	1.9e-16
QAY49499.1|2067335_2067629_-	hypothetical protein	NA	A0A0U2KD41	Escherichia_phage	70.5	3.3e-34
QAY49500.1|2067625_2068222_-	hypothetical protein	NA	H9C173	Pectobacterium_phage	64.1	1.5e-70
QAY49501.1|2068299_2068479_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49502.1|2068630_2069272_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49503.1|2069515_2069749_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49504.1|2070147_2070636_+	hypothetical protein	NA	A0A142KB62	Gordonia_phage	42.7	6.4e-27
>prophage 8
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	2074698	2086867	5061273		Pectobacterium_phage(66.67%)	19	NA	NA
QAY49508.1|2074698_2075487_-	hypothetical protein	NA	A0A0P0ZC44	Stx2-converting_phage	69.8	1.1e-39
QAY49509.1|2075759_2075981_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49510.1|2076055_2076172_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49511.1|2076168_2076393_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49512.1|2076389_2076701_-	hypothetical protein	NA	A0A222YXX1	Escherichia_phage	65.7	1.2e-34
QAY49513.1|2076697_2076934_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49514.1|2076935_2077346_-	hypothetical protein	NA	NA	NA	NA	NA
QAY49515.1|2077384_2078800_-	Replicative DNA helicase	NA	H9C165	Pectobacterium_phage	66.7	6.6e-173
QAY49516.1|2078789_2079545_-	hypothetical protein	NA	H9C164	Pectobacterium_phage	68.5	2.4e-41
QAY49517.1|2079541_2079766_-	hypothetical protein	NA	H9C163	Pectobacterium_phage	54.1	6.1e-17
QAY49518.1|2079805_2080282_-	hypothetical protein	NA	H9C162	Pectobacterium_phage	48.6	1.9e-23
QAY49519.1|2080340_2080571_-	hypothetical protein	NA	H6WRX5	Salmonella_phage	63.2	1.5e-21
QAY49520.1|2080669_2081083_+	hypothetical protein	NA	A0A1B5FPF4	Escherichia_phage	49.1	8.7e-09
QAY49521.1|2082093_2082414_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49522.1|2082444_2084661_+	hypothetical protein	NA	H9C157	Pectobacterium_phage	35.6	4.7e-101
QAY49523.1|2084657_2085227_+	hypothetical protein	NA	H9C156	Pectobacterium_phage	49.2	6.1e-37
QAY49524.1|2085226_2085409_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49525.1|2085618_2085882_+	hypothetical protein	NA	H9C153	Pectobacterium_phage	38.0	1.2e-06
QAY49526.1|2085850_2086867_+	hypothetical protein	NA	H9C152	Pectobacterium_phage	63.6	1.1e-126
>prophage 9
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	2231008	2237460	5061273		Acidithiobacillus_phage(16.67%)	10	NA	NA
QAY49652.1|2231008_2232550_+	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	46.4	1.7e-129
QAY49653.1|2232564_2233311_+	Insertion sequence IS5376 putative ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QAY49654.1|2233474_2233744_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49655.1|2233759_2234170_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49656.1|2234390_2235209_+	hypothetical protein	NA	A0A2C9CX26	Yersinia_phage	38.6	8.8e-45
QAY49657.1|2235208_2235454_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49658.1|2235547_2236021_+	Antirestriction protein KlcA	NA	A0A2D0W9W4	Bordetella_phage	33.1	4.3e-12
QAY49659.1|2236036_2236513_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49660.1|2236575_2236797_+	hypothetical protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
QAY49661.1|2236815_2237460_+	hypothetical protein	NA	A0A2I6PI07	Pseudomonas_phage	32.9	1.8e-24
>prophage 10
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	2268263	2274566	5061273		Enterobacteria_phage(66.67%)	6	NA	NA
QAY49694.1|2268263_2268806_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	61.8	6.0e-50
QAY49695.1|2268810_2269689_-	Glucose-1-phosphate thymidylyltransferase 1	NA	I7I009	Enterobacteria_phage	64.5	6.6e-107
QAY49696.1|2269746_2270646_-	dTDP-4-dehydrorhamnose reductase	NA	I7HXC9	Enterobacteria_phage	34.8	1.7e-28
QAY49697.1|2270645_2271731_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	8.8e-101
QAY49698.1|2272103_2272997_-	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	42.0	3.0e-46
QAY49699.1|2273171_2274566_-	hypothetical protein	NA	A0A291LBB9	Klebsiella_phage	33.0	6.3e-19
>prophage 11
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	2368742	2378187	5061273		Enterobacteria_phage(85.71%)	10	NA	NA
QAY49772.1|2368742_2369879_+	hypothetical protein	NA	Q9EYF7	Enterobacteria_phage	96.7	6.1e-161
QAY49773.1|2369875_2371879_+	hypothetical protein	NA	Q9EYF6	Enterobacteria_phage	95.7	0.0e+00
QAY49774.1|2372003_2372465_+	putative lipoprotein YehR	NA	Q9EYF5	Enterobacteria_phage	99.3	3.2e-76
QAY49775.1|2372505_2372976_-	hypothetical protein	NA	Q9EYF4	Enterobacteria_phage	100.0	1.8e-82
QAY49776.1|2373022_2373742_-	Transcriptional regulatory protein YehT	NA	NA	NA	NA	NA
QAY49777.1|2373738_2375424_-	Sensor histidine kinase YehU	NA	Q9EYF3	Enterobacteria_phage	99.6	2.5e-304
QAY49778.1|2375645_2376377_+	HTH-type transcriptional regulator MlrA	NA	Q9EYF2	Enterobacteria_phage	98.5	6.3e-111
QAY49779.1|2376436_2376544_+	hypothetical protein	NA	NA	NA	NA	NA
QAY49780.1|2376524_2377256_-	Glycine betaine uptake system permease protein YehW	NA	NA	NA	NA	NA
QAY49781.1|2377260_2378187_-	Glycine betaine uptake system ATP-binding protein YehX	NA	G3M9Y6	Bacillus_virus	30.8	1.3e-23
>prophage 12
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	2955614	2962754	5061273		Escherichia_phage(83.33%)	6	NA	NA
QAY50298.1|2955614_2958176_+	DNA mismatch repair protein MutS	NA	E3T5Q7	Cafeteria_roenbergensis_virus	20.8	1.6e-31
QAY50299.1|2958281_2958938_+	Serine/threonine-protein phosphatase 2	NA	A0A077SLQ6	Escherichia_phage	46.1	3.3e-50
QAY50300.1|2958988_2959756_-	HTH-type transcriptional repressor GlcR	NA	A0A077SK06	Escherichia_phage	57.4	9.7e-70
QAY50301.1|2959951_2960860_+	2-hydroxy-3-oxopropionate reductase	NA	A0A077SLF7	Escherichia_phage	76.2	1.9e-117
QAY50302.1|2960856_2962119_+	hypothetical protein	NA	A0A077SLJ7	Escherichia_phage	61.4	2.2e-135
QAY50303.1|2962115_2962754_+	L-fuculose phosphate aldolase	NA	A0A077SK32	Escherichia_phage	74.5	1.4e-82
>prophage 13
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	4051776	4059154	5061273		Sodalis_phage(33.33%)	8	NA	NA
QAY51323.1|4051776_4052379_+	hypothetical protein	NA	A0A286S1S7	Klebsiella_phage	36.3	2.6e-25
QAY51324.1|4052389_4052731_+	hypothetical protein	NA	A0A1B5FPL8	Escherichia_phage	61.5	2.5e-33
QAY51325.1|4052723_4053095_+	hypothetical protein	NA	NA	NA	NA	NA
QAY51326.1|4053081_4055838_+	DNA primase TraC	NA	A0A1W6JPG0	Morganella_phage	57.3	1.8e-299
QAY51327.1|4056422_4056584_+	hypothetical protein	NA	NA	NA	NA	NA
QAY51328.1|4056600_4057062_+	hypothetical protein	NA	Q2A0B3	Sodalis_phage	72.2	9.9e-62
QAY51329.1|4057055_4057733_+	hypothetical protein	NA	Q2A0B2	Sodalis_phage	71.6	9.2e-56
QAY51330.1|4057732_4059154_+	hypothetical protein	NA	B6SCW4	Bacteriophage	53.2	5.7e-124
>prophage 14
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	4722626	4729690	5061273	integrase	Escherichia_phage(50.0%)	8	4715619:4715632	4731341:4731354
4715619:4715632	attL	AATTACCGTCTTTG	NA	NA	NA	NA
QAY51925.1|4722626_4723130_+	hypothetical protein	NA	U5P0U6	Shigella_phage	98.2	5.3e-93
QAY51926.1|4724155_4724656_+	Transcriptional repressor MprA	NA	NA	NA	NA	NA
QAY51927.1|4725122_4725500_-	hypothetical protein	NA	Q71TF0	Escherichia_phage	99.2	1.1e-66
QAY51928.1|4725544_4725820_-	hypothetical protein	NA	Q71TE9	Escherichia_phage	98.9	2.0e-46
QAY51929.1|4726470_4726764_-	hypothetical protein	NA	U5P0U6	Shigella_phage	92.8	8.3e-46
QAY51930.1|4726892_4727168_-	hypothetical protein	NA	Q71TE9	Escherichia_phage	96.7	7.7e-46
QAY51931.1|4727218_4728169_-	hypothetical protein	NA	NA	NA	NA	NA
QAY51932.1|4728424_4729690_-|integrase	Prophage integrase IntS	integrase	Q7M297	Enterobacteria_phage	37.8	2.3e-76
4731341:4731354	attR	CAAAGACGGTAATT	NA	NA	NA	NA
>prophage 15
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	4888001	4894782	5061273		Shigella_phage(33.33%)	8	NA	NA
QAY52087.1|4888001_4889999_-	Glycine betaine transporter	NA	A0A2I7QNT1	Vibrio_phage	25.9	4.4e-21
QAY52088.1|4890153_4890972_-	hypothetical protein	NA	A0A0P0I4A4	Acinetobacter_phage	45.2	1.2e-65
QAY52089.1|4891007_4891310_-	hypothetical protein	NA	NA	NA	NA	NA
QAY52090.1|4891508_4891922_+	hypothetical protein	NA	Q716C2	Shigella_phage	96.5	5.2e-62
QAY52091.1|4891918_4892161_+	hypothetical protein	NA	Q716C2	Shigella_phage	92.4	4.7e-39
QAY52092.1|4892243_4892501_+	hypothetical protein	NA	NA	NA	NA	NA
QAY52093.1|4893057_4893825_-	Fe(3+) dicitrate transport ATP-binding protein FecE	NA	G3M9Y6	Bacillus_virus	24.8	6.4e-13
QAY52094.1|4893825_4894782_-	Fe(3+) dicitrate transport system permease protein FecD	NA	A0A2H4IY97	uncultured_Caudovirales_phage	26.1	1.1e-17
>prophage 16
CP035477	Escherichia coli strain U13A chromosome, complete genome	5061273	4917448	4924110	5061273		Enterobacteria_phage(33.33%)	12	NA	NA
QAY52117.1|4917448_4918195_-	Insertion sequence IS5376 putative ATP-binding protein	NA	U5N3V8	Enterobacteria_phage	31.6	3.5e-24
QAY52118.1|4918209_4919751_-	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	46.4	1.7e-129
QAY52119.1|4919931_4920567_+	hypothetical protein	NA	NA	NA	NA	NA
QAY52120.1|4920908_4921382_+	Antirestriction protein KlcA	NA	A9J566	Pseudomonas_phage	30.3	8.7e-13
QAY52121.1|4921397_4921874_+	hypothetical protein	NA	NA	NA	NA	NA
QAY52122.1|4921936_4922158_+	hypothetical protein	NA	A0A142F0X9	Klebsiella_phage	45.8	1.9e-10
QAY52123.1|4922157_4922271_+	hypothetical protein	NA	NA	NA	NA	NA
QAY52124.1|4922320_4922689_+	Cytoskeleton bundling-enhancing protein CbeA	NA	NA	NA	NA	NA
QAY52125.1|4922778_4923156_+	Cytoskeleton-binding toxin CbtA	NA	NA	NA	NA	NA
QAY52126.1|4923152_4923323_+	hypothetical protein	NA	NA	NA	NA	NA
QAY52127.1|4923337_4923763_+	hypothetical protein	NA	Q6H9S5	Enterobacteria_phage	99.0	1.5e-48
QAY52128.1|4923759_4924110_+	hypothetical protein	NA	A0A0P0ZBY2	Stx2-converting_phage	66.4	4.7e-40
>prophage 1
CP035478	Escherichia coli strain U13A plasmid pU13A_A, complete sequence	149312	72685	81927	149312		Escherichia_phage(55.56%)	10	NA	NA
QAY52338.1|72685_75802_-	Type I restriction enzyme EcoR124II R protein	NA	A0A220A398	Liberibacter_phage	24.0	3.7e-27
QAY52339.1|75923_77207_-	hypothetical protein	NA	F2Y1N5	Organic_Lake_phycodnavirus	26.5	2.2e-10
QAY52340.1|77203_78760_-	putative type I restriction enzymeP M protein	NA	A0A2H4PQP4	Staphylococcus_phage	42.7	3.2e-104
QAY52341.1|78942_79164_+	hypothetical protein	NA	A0A222YXU1	Escherichia_phage	100.0	6.7e-32
QAY52342.1|79163_79544_+	Toxin Doc	NA	A0A077SK56	Escherichia_phage	100.0	1.1e-63
QAY52343.1|79548_79728_+	hypothetical protein	NA	Q71TH5	Escherichia_phage	96.6	3.5e-23
QAY52344.1|79755_80115_+	hypothetical protein	NA	A0A077SLM1	Escherichia_phage	98.9	5.0e-45
QAY52345.1|80077_80452_+	hypothetical protein	NA	Q716C2	Shigella_phage	94.3	5.4e-66
QAY52346.1|80401_80719_-	hypothetical protein	NA	NA	NA	NA	NA
QAY52347.1|80946_81927_-	hypothetical protein	NA	Q38213	Escherichia_phage	99.4	6.1e-186
>prophage 2
CP035478	Escherichia coli strain U13A plasmid pU13A_A, complete sequence	149312	96875	104603	149312		Stx2-converting_phage(45.45%)	12	NA	NA
QAY52361.1|96875_97394_-	hypothetical protein	NA	A0A0P0ZEB3	Stx2-converting_phage	99.4	6.5e-94
QAY52362.1|97551_98331_-	Insertion sequence IS5376 putative ATP-binding protein	NA	A0A2L1IVB6	Escherichia_phage	100.0	1.5e-139
QAY52363.1|98330_99353_-	hypothetical protein	NA	A0A2L1IVA1	Escherichia_phage	99.7	3.2e-201
QAY52364.1|99366_100125_-	hypothetical protein	NA	A0A0P0ZBS5	Stx2-converting_phage	96.9	9.1e-129
QAY52365.1|100126_100384_-	hypothetical protein	NA	A0A0P0ZEB3	Stx2-converting_phage	97.4	2.3e-31
QAY52366.1|100432_100780_-	hypothetical protein	NA	A0A0P0ZDM8	Stx2-converting_phage	100.0	2.6e-62
QAY52367.1|100776_101181_-	hypothetical protein	NA	A0A0P0ZCV4	Stx2-converting_phage	100.0	3.0e-70
QAY52368.1|101209_101566_-	hypothetical protein	NA	Q6H9S3	Enterobacteria_phage	99.0	3.6e-51
QAY52369.1|101682_103206_-	Group II intron-encoded protein LtrA	NA	A0A0U4J920	Pseudomonas_phage	31.8	6.2e-44
QAY52370.1|103499_103871_+	hypothetical protein	NA	NA	NA	NA	NA
QAY52371.1|103797_104277_-	hypothetical protein	NA	A0A0N7C035	Escherichia_phage	94.9	2.7e-70
QAY52372.1|104276_104603_-	Insertion element IS6110 uncharacterized 12.0 kDa protein	NA	Q6H9S4	Enterobacteria_phage	97.2	1.8e-54
