The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035457	Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 1, complete sequence	3125062	1949267	2020051	3125062	tRNA,transposase	Escherichia_phage(25.0%)	57	NA	NA
QAY35516.1|1949267_1949858_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
QAY35517.1|1950175_1951123_-	ribose-phosphate pyrophosphokinase	NA	A0A2K9L8D8	Tupanvirus	38.1	7.1e-46
QAY35518.1|1951155_1952025_-	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase	NA	NA	NA	NA	NA
QAY35519.1|1952039_1952693_-	outer membrane lipoprotein LolB	NA	NA	NA	NA	NA
QAY35520.1|1952953_1954207_+|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
QAY35521.1|1954376_1955465_+	peptide chain release factor 1	NA	W8EDB3	Pseudomonas_phage	40.3	2.3e-08
QAY35522.1|1955466_1956315_+	peptide chain release factor N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
QAY35523.1|1956327_1956708_+	invasion protein	NA	NA	NA	NA	NA
QAY35524.1|1956749_1957559_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
QAY35525.1|1957573_1958428_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	40.1	2.4e-45
QAY35526.1|1958719_1959979_+	HAAAP family serine/threonine permease	NA	NA	NA	NA	NA
QAY35527.1|1960075_1961959_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.5	7.0e-21
QAY35528.1|1962261_1963620_+	Na+/H+ antiporter NhaC family protein	NA	NA	NA	NA	NA
QAY35529.1|1963904_1965572_+	bifunctional UDP-sugar hydrolase/5'-nucleotidase	NA	NA	NA	NA	NA
QAY35530.1|1965714_1966194_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
QAY35531.1|1966393_1966744_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	46.3	2.8e-16
QAY35532.1|1966777_1967920_+|transposase	transposase	transposase	A0A077SLN2	Escherichia_phage	70.4	8.3e-134
QAY35533.1|1969981_1970563_+	DNA endonuclease SmrA	NA	NA	NA	NA	NA
QAY35534.1|1970750_1971584_-	TraB/GumN family protein	NA	NA	NA	NA	NA
QAY35535.1|1971792_1974702_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.7	8.7e-103
QAY35536.1|1974882_1975278_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
QAY35537.1|1975274_1975712_-	hypothetical protein	NA	NA	NA	NA	NA
QAY35538.1|1975698_1976364_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAY35539.1|1977036_1978068_+	OmpA family protein	NA	NA	NA	NA	NA
QAY35540.1|1978255_1978669_+	META domain-containing protein	NA	NA	NA	NA	NA
QAY35541.1|1978736_1979591_-	co-chaperone YbbN	NA	NA	NA	NA	NA
QAY35542.1|1979864_1980689_-	SDR family NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAY36525.1|1980705_1981614_-	TIGR01777 family protein	NA	NA	NA	NA	NA
QAY35543.1|1981743_1982292_+	phosphodiesterase	NA	NA	NA	NA	NA
QAY35544.1|1982391_1984539_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
QAY35545.1|1984699_1985896_-	acetate kinase	NA	NA	NA	NA	NA
QAY35546.1|1986235_1986685_+	DUF412 domain-containing protein	NA	NA	NA	NA	NA
QAY35547.1|1986900_1987839_-	hypothetical protein	NA	NA	NA	NA	NA
QAY35548.1|1987954_1988785_-	23S rRNA (guanine(745)-N(1))-methyltransferase	NA	NA	NA	NA	NA
QAY36526.1|1988962_1989076_+	DUF2057 domain-containing protein	NA	NA	NA	NA	NA
QAY35549.1|1989124_1990402_-	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
QAY35550.1|1990388_1992758_-	HAMP domain-containing protein	NA	NA	NA	NA	NA
QAY35551.1|1992761_1994003_-	extracellular solute-binding protein	NA	NA	NA	NA	NA
QAY35552.1|1994216_1994717_-	YfbU family protein	NA	NA	NA	NA	NA
QAY35553.1|1995009_1996764_-	formate--tetrahydrofolate ligase	NA	NA	NA	NA	NA
QAY35554.1|1997377_1998124_-	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	31.0	3.4e-27
QAY36527.1|1998238_1998373_-	hypothetical protein	NA	NA	NA	NA	NA
QAY35555.1|1998433_2000329_+	U32 family peptidase	NA	Q6DW11	Phage_TP	26.5	3.1e-24
QAY35556.1|2000604_2002878_-	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	41.5	2.3e-159
QAY35557.1|2002934_2003807_-	formate transporter FocA	NA	NA	NA	NA	NA
QAY35558.1|2004631_2006380_-	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
QAY35559.1|2006462_2007278_-	exodeoxyribonuclease III	NA	A0A0N9QXX6	Chrysochromulina_ericina_virus	26.7	1.3e-16
QAY35560.1|2007740_2007989_+	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
QAY36528.1|2008117_2008561_-|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	49.6	5.5e-25
QAY35561.1|2008603_2009746_+|transposase	transposase	transposase	A0A077SLN2	Escherichia_phage	70.4	3.2e-133
QAY35562.1|2009912_2010572_-	hypothetical protein	NA	NA	NA	NA	NA
QAY35563.1|2010667_2011711_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	42.6	1.5e-73
QAY35564.1|2011697_2012456_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.5e-75
QAY35565.1|2012501_2012768_-	hypothetical protein	NA	NA	NA	NA	NA
QAY35566.1|2014082_2015192_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QAY35567.1|2015191_2018299_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QAY35568.1|2018842_2020051_+|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	47.6	7.9e-50
>prophage 2
CP035457	Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 1, complete sequence	3125062	2064140	2074011	3125062	transposase	Enterobacteria_phage(37.5%)	10	NA	NA
QAY35606.1|2064140_2065925_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	42.5	1.5e-28
QAY35607.1|2065966_2067028_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	52.2	1.6e-99
QAY35608.1|2067107_2067980_+	glucose-1-phosphate thymidylyltransferase	NA	I7I009	Enterobacteria_phage	67.2	3.2e-109
QAY35609.1|2067992_2068883_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	35.4	2.8e-36
QAY35610.1|2068900_2069446_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	56.7	5.8e-53
QAY35611.1|2069447_2070230_+	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
QAY35612.1|2070226_2071117_+	UTP--glucose-1-phosphate uridylyltransferase GalU	NA	A0A127AW70	Bacillus_phage	46.4	1.8e-59
QAY35613.1|2071237_2072446_-|transposase	IS256 family transposase	transposase	A0A218MNI5	uncultured_virus	47.6	7.9e-50
QAY35614.1|2072518_2073388_-	hypothetical protein	NA	NA	NA	NA	NA
QAY35615.1|2073384_2074011_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A0S2MWH1	Cellulophaga_phage	36.0	8.3e-27
>prophage 3
CP035457	Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 1, complete sequence	3125062	2699407	2758208	3125062	lysis,transposase,integrase	Escherichia_phage(50.0%)	46	2734041:2734100	2758588:2760534
QAY36089.1|2699407_2700700_+|integrase	site-specific integrase	integrase	NA	NA	NA	NA
QAY36090.1|2700692_2702630_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36091.1|2702640_2704629_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36092.1|2704634_2705021_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36093.1|2705034_2705877_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36094.1|2706673_2707717_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	42.6	1.5e-73
QAY36095.1|2707703_2708462_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.5e-75
QAY36096.1|2708940_2710692_+	restriction endonuclease subunit S	NA	NA	NA	NA	NA
QAY36097.1|2710694_2711930_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
QAY36098.1|2711974_2713891_+	DUF262 domain-containing protein	NA	NA	NA	NA	NA
QAY36099.1|2713946_2714540_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36100.1|2714664_2715876_-	protein kinase	NA	NA	NA	NA	NA
QAY36101.1|2716033_2716489_-	TerB family tellurite resistance protein	NA	NA	NA	NA	NA
QAY36102.1|2716570_2717536_-	zinc transporter ZntB	NA	NA	NA	NA	NA
QAY36103.1|2717875_2721790_+	ATP-dependent RNA helicase HrpA	NA	A0A1V0SIV3	Klosneuvirus	29.8	1.2e-54
QAY36104.1|2721901_2722567_-	peptidase M23	NA	NA	NA	NA	NA
QAY36105.1|2722556_2723798_-	MFS transporter	NA	NA	NA	NA	NA
QAY36106.1|2724806_2726360_+	BCCT family transporter	NA	NA	NA	NA	NA
QAY36107.1|2726475_2727708_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
QAY36108.1|2727826_2728297_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36109.1|2728501_2728858_-	glutaredoxin	NA	NA	NA	NA	NA
QAY36110.1|2729031_2729376_+	DUF3802 family protein	NA	NA	NA	NA	NA
QAY36111.1|2729488_2730211_+	DTW domain-containing protein	NA	NA	NA	NA	NA
QAY36112.1|2730339_2731251_+	N-acetylglucosamine kinase	NA	NA	NA	NA	NA
QAY36113.1|2731478_2732765_+	DEAD/DEAH box helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.6	2.5e-46
2734041:2734100	attL	GTGTCAACGATCATTAAAATTTGATCCACTTTTTAACTGATTCCGATCAACCAAAAGTGA	NA	NA	NA	NA
QAY36114.1|2734109_2734868_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.5e-75
QAY36115.1|2734854_2735898_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	42.6	1.5e-73
QAY36116.1|2735956_2737339_-	DASS family sodium-coupled anion symporter	NA	NA	NA	NA	NA
QAY36117.1|2737820_2738495_-	SanA protein	NA	NA	NA	NA	NA
QAY36118.1|2738737_2740426_-	NAD-dependent malic enzyme	NA	NA	NA	NA	NA
QAY36119.1|2740866_2741763_-	1,4-dihydroxy-2-naphthoyl-CoA synthase	NA	NA	NA	NA	NA
QAY36120.1|2741966_2744423_+	ATP-dependent RNA helicase	NA	A0A2H4UU36	Bodo_saltans_virus	28.6	1.8e-29
QAY36121.1|2744451_2744820_+	spore gernimation protein	NA	NA	NA	NA	NA
QAY36122.1|2744992_2745421_-	nitrous oxide-stimulated promoter family protein	NA	NA	NA	NA	NA
QAY36123.1|2745659_2745953_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36124.1|2746265_2746904_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
QAY36125.1|2747003_2748179_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
QAY36126.1|2748352_2749225_-	DMT family transporter	NA	NA	NA	NA	NA
QAY36127.1|2749412_2750300_-	cytidine deaminase	NA	NA	NA	NA	NA
QAY36128.1|2750494_2751175_-|lysis	CidB/LrgB family autolysis modulator	lysis	NA	NA	NA	NA
QAY36129.1|2751171_2751516_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36130.1|2751689_2752205_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36131.1|2752346_2753768_-	exodeoxyribonuclease I	NA	NA	NA	NA	NA
QAY36132.1|2755302_2755569_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36133.1|2755579_2756593_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
QAY36134.1|2756981_2758208_+|integrase	site-specific integrase	integrase	A0A067ZJC5	Vibrio_phage	36.3	6.1e-58
2758588:2760534	attR	GTGTCAACGATCATTAAAATTTGATCCACTTTTTAACTGATTCCGATCAACCAAAAGTGATCCACATAATTACTCAGGTAATGTTCCTGAGCGACGTTTGTCTTTCAGGCGATAACTATCACCACTTAACTGAAGCACATGACTATGGTGAAGTAATCTATCTAACATTGCTGCTGTTAATGTCGCATCATCGGCAAAGGCCGTCGGCCATTGCCCGAATGATAAATTACTCGTTAATATAATACTTCCGTGTTCATACCGTTTAGCTATAACATTAAAAAACAGATTGGCTTCTTCTCGTCCAAAAGGCAAATATCCGATCTCATCAATAATTAATAATTTCGGTGCCATGATGGAGCGTGAAAGATATTGTTTTAATTTATTTTGACGTTTAGCTGTCGATAACTGCAACATCAAATCTGCGGCAGTGATAAAACGTGTTTTTTTCTTTGCTTGCACGGCTTTTATACCAAGGCCGATTGCTAAATGTGTTTTGCCTACGCCACTTGGCCCTAAAAGTACAAGGTTCTCACGGCGCTCAATAAAACTTAGGGTACTTAGCTCCTTTATTTGCTGCTTAGGTACGCCGGTGGCAAACTTAAAATCAAAGCTCTCAAGCTCCTTATGAGATGGGAATCCAGCCATACGACTGAACATACTTCGAGTTCGTTCATCACGATGTAATTGTTCATTTTTGAGCAAAGCTAATAAAAAGTCGCCATAACTCTTTTCTTCACGAACGCATTCATCGGCCACCGCAGACCAATGTTCAAAAGCTTGTAAGTTGAATGATTCACATAATTCGCTAATTTGTTTATACAGTAACATTGTGCTCACCAAATTGTAGTGACTCATAAACAGACATCGGGTGCTGAAGATTAATAACATTACTCGGCGGTACTACCGCCATCGATAATGTTGCTCCTTGCGCTAGTGGTTGCTGTATCATTACCGGTAACGGTTGTAGGTACTCAACTTCCTGCACTAATCTATCTGCTGGTTTTTCTTGTGTTGTTCCATGAATACGTTGATGTGCTATTCGTTCAAGCCAAGGGCCTACTTTGGCATTAGCAATATCGCTATCAAGTTCTAAATTTTGAACTCGAAGTTGCGTGACTAGCGGTAAGATAAAGCTGTTCTTTAAATAATGATTAAAACGTTCAACTTTGCCTTTTGTCTTCGCTCTATAGGGCTTACAAGCCATGAGCTTAAAGCCATAATCTTTTGACATTTGTAGCATTTCATCGTGTAACTTATGCTCTCCTTCAGCATAAGCGTCTCGCTTGATTATCAATGCTTTCGCATTATCGCAGAGCACCTCTTTTGTTACGCCACCAAAATATTCAAACGCTTCTTGTAGACCTTGCTGCCATGCAGAAGAGCGCTCGTTATCAAAGAATTTAACAAAGCAAGCACGAGAAAATCCTAACGTCGCAACAAATGCTTTGAGTGGTCGTTTTCCTCGCCTAATCGTGGTGAAATCAATTTGTAACTGCTGTCCTGGCTGTGTTTCAAAACGAATGAGTGGCTCTGCTGGTATTTGCTGTCGAAATTGACGAATAAAACGACGTAACTGGGCAATCCCGCCGTTATAACCTCGTTGTTTTACTTCATCAAATAATACAGTAGCAGGTAGCCAATCAGGCTTAGCCTGATTGATCCGCTCAATCAAATATGGCTTATATGAGTCTAATTTCGATGGGGTGGATTTACGTCCCGTATACATAGGTAATGCATTATGGTGTAGATACTTTTTTACGGTATTTCTTGACACACCAAGCTCTCGGGCAATTTTTCGAATACTTTGACCTTGCTTAAAGCGAACATGGATATCCACGTATATCTCCTTGGTTAGCATAAATTACCCGTTTAAAAATAAAACGGATAATACCAAGTGGATCAGTTTTCAATGATCGTTAGTGGATCAGTTTTGCATGATCGGTGACA	NA	NA	NA	NA
>prophage 1
CP035458	Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 2, complete sequence	1098614	91876	100474	1098614		Vibrio_phage(14.29%)	11	NA	NA
QAY37421.1|91876_92230_-	DUF1364 domain-containing protein	NA	A0A2I7RNU4	Vibrio_phage	45.2	2.5e-20
QAY36643.1|92271_92631_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36644.1|92996_93584_-	DUF1367 family protein	NA	H9C173	Pectobacterium_phage	46.7	8.8e-47
QAY36645.1|93583_94138_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36646.1|94130_94790_-	hypothetical protein	NA	W6MVG8	Pseudomonas_phage	35.3	1.9e-10
QAY36647.1|94812_95718_-	hypothetical protein	NA	A0A1W6JP67	Staphylococcus_phage	31.6	3.3e-24
QAY36648.1|95856_96168_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36649.1|96477_97194_+	helix-turn-helix domain-containing protein	NA	U5P0T5	Shigella_phage	42.9	1.3e-28
QAY36650.1|97625_97985_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36651.1|98054_98912_+	phage recombination protein Bet	NA	A0A1I9KF88	Aeromonas_phage	56.4	6.6e-67
QAY36652.1|98911_100474_+	homogentisate 1,2-dioxygenase	NA	A0A2H4J6P1	uncultured_Caudovirales_phage	38.7	2.5e-80
>prophage 2
CP035458	Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 2, complete sequence	1098614	184612	253987	1098614	transposase	Mycobacterium_phage(37.5%)	58	NA	NA
QAY36730.1|184612_185409_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	37.7	6.3e-32
QAY36731.1|185480_186617_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	32.2	2.8e-17
QAY36732.1|186678_187104_-	copper resistance protein NlpE	NA	NA	NA	NA	NA
QAY36733.1|187280_187586_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36734.1|187861_188740_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAY36735.1|188843_190181_+	MATE family efflux transporter	NA	NA	NA	NA	NA
QAY36736.1|190243_191182_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAY36737.1|191408_193199_+	sodium:proton antiporter	NA	NA	NA	NA	NA
QAY36738.1|193389_193719_+	multidrug efflux SMR transporter	NA	NA	NA	NA	NA
QAY36739.1|193758_193995_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36740.1|194061_194472_+	copper chaperone PCu(A)C	NA	NA	NA	NA	NA
QAY36741.1|194464_195355_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
QAY36742.1|195320_196589_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36743.1|196606_197290_-	acyltransferase	NA	NA	NA	NA	NA
QAY36744.1|197319_198366_-	glycosyltransferase	NA	NA	NA	NA	NA
QAY36745.1|198481_199561_-	DUF4056 domain-containing protein	NA	NA	NA	NA	NA
QAY37426.1|199572_200667_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36746.1|200712_201561_-	TonB-dependent receptor	NA	NA	NA	NA	NA
QAY36747.1|201776_201983_-	DUF3283 family protein	NA	NA	NA	NA	NA
QAY36748.1|202044_202803_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36749.1|203371_204082_+	purine-nucleoside phosphorylase	NA	NA	NA	NA	NA
QAY37427.1|204324_205818_+|transposase	IS1 family transposase	transposase	NA	NA	NA	NA
QAY36750.1|206313_207264_+	transaldolase	NA	M4SIN4	Cyanophage	29.7	6.7e-12
QAY36751.1|207362_209357_+	transketolase	NA	NA	NA	NA	NA
QAY36752.1|209866_211840_+	amidohydrolase	NA	NA	NA	NA	NA
QAY36753.1|211904_212801_-	DUF808 domain-containing protein	NA	NA	NA	NA	NA
QAY37428.1|213527_213722_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36754.1|213730_214930_+|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
QAY36755.1|215806_216781_-	nucleoside hydrolase	NA	NA	NA	NA	NA
QAY36756.1|216964_218221_-	adenylosuccinate synthetase	NA	L7Y4J5	Megavirus	31.0	1.3e-47
QAY36757.1|218377_219292_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAY36758.1|220059_220856_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	37.3	1.4e-31
QAY36759.1|221688_221901_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36760.1|221837_222634_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	37.3	1.1e-31
QAY36761.1|223365_224259_-	proline/glycine betaine ABC transporter permease	NA	NA	NA	NA	NA
QAY36762.1|224417_225419_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAY36763.1|225775_226588_+	sugar-phosphatase	NA	NA	NA	NA	NA
QAY36764.1|226686_226920_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36765.1|226924_227296_-	NirD/YgiW/YdeI family stress tolerance protein	NA	A0A1I9LJU6	Stx_converting_phage	45.0	3.3e-15
QAY36766.1|227538_228150_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAY36767.1|228349_229456_+	efflux RND transporter periplasmic adaptor subunit	NA	S5VL44	Leptospira_phage	23.8	6.4e-06
QAY36768.1|229459_232510_+	efflux RND transporter permease subunit	NA	NA	NA	NA	NA
QAY36769.1|232575_233466_-	DUF535 domain-containing protein	NA	NA	NA	NA	NA
QAY36770.1|234244_235216_-	arginase	NA	NA	NA	NA	NA
QAY37429.1|235261_235996_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
QAY36771.1|236380_237103_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QAY36772.1|237254_238790_-	porin	NA	NA	NA	NA	NA
QAY36773.1|239023_239602_-	DJ-1 family protein	NA	NA	NA	NA	NA
QAY37430.1|239611_240244_-	bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase	NA	NA	NA	NA	NA
QAY36774.1|240236_241211_-	sugar kinase	NA	NA	NA	NA	NA
QAY36775.1|241356_242211_-	tagatose bisphosphate family class II aldolase	NA	NA	NA	NA	NA
QAY36776.1|242491_244030_-	DUF2264 domain-containing protein	NA	NA	NA	NA	NA
QAY36777.1|244218_245850_-	arylsulfatase	NA	NA	NA	NA	NA
QAY36778.1|245921_247175_-	anaerobic sulfatase maturase	NA	NA	NA	NA	NA
QAY36779.1|247434_250515_+	chondroitinase	NA	NA	NA	NA	NA
QAY36780.1|250649_251204_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36781.1|251243_251546_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36782.1|252994_253987_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP035458	Photobacterium damselae subsp. damselae strain KC-Na-NB1 chromosome 2, complete sequence	1098614	295430	383267	1098614	transposase,tRNA	Mycobacterium_phage(18.75%)	60	NA	NA
QAY36824.1|295430_295832_+|transposase	IS200/IS605 family transposase	transposase	A0A1S5RHE3	Helicobacter_phage	49.2	1.7e-25
QAY36825.1|295927_296758_+	methyltransferase domain-containing protein	NA	NA	NA	NA	NA
QAY36826.1|296778_298452_-	alpha,alpha-phosphotrehalase	NA	NA	NA	NA	NA
QAY36827.1|298519_299986_-	PTS trehalose transporter subunit IIBC	NA	NA	NA	NA	NA
QAY36828.1|300276_300582_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36829.1|300587_301538_-	HTH-type transcriptional regulator TreR	NA	C6ZCU4	Enterobacteria_phage	26.7	4.9e-15
QAY36830.1|301661_302096_-	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
QAY36831.1|302162_303047_-	PTS mannose/fructose/sorbose transporter family subunit IID	NA	NA	NA	NA	NA
QAY36832.1|303036_303819_-	PTS mannose/fructose/sorbose/N-acetylgalactosamine transporter subunit IIC	NA	NA	NA	NA	NA
QAY36833.1|303838_304312_-	PTS N-acetylgalactosamine transporter subunit IIB	NA	NA	NA	NA	NA
QAY36834.1|304385_305162_-	DeoR/GlpR transcriptional regulator	NA	NA	NA	NA	NA
QAY36835.1|305565_306501_+	DUF535 domain-containing protein	NA	NA	NA	NA	NA
QAY36836.1|306671_307468_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	37.3	1.1e-31
QAY36837.1|307565_307748_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36838.1|308070_308866_+|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	37.7	6.3e-32
QAY36839.1|309100_310192_-	choloylglycine hydrolase family protein	NA	A0A1J0F9I3	Only_Syngen_Nebraska_virus	28.4	6.9e-29
QAY36840.1|310354_311716_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	71.5	1.9e-156
QAY36841.1|312181_313486_+	serine dehydratase subunit alpha family protein	NA	NA	NA	NA	NA
QAY36842.1|313599_314685_-|transposase	transposase	transposase	Q9G0F2	Phage_Gifsy-1	65.7	5.1e-133
QAY37432.1|315376_316636_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36843.1|316715_317624_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAY36844.1|317799_318690_-	DMT family transporter	NA	NA	NA	NA	NA
QAY36845.1|318881_319427_-	exonuclease domain-containing protein	NA	NA	NA	NA	NA
QAY36846.1|319548_319944_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
QAY36847.1|320099_320894_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QAY36848.1|321104_323375_-	phospholipase	NA	A0A2H4UUE4	Bodo_saltans_virus	28.9	5.7e-09
QAY36849.1|323477_325478_-	DUF3346 domain-containing protein	NA	NA	NA	NA	NA
QAY36850.1|326653_327868_+	ParA family protein	NA	Q1MVJ3	Enterobacteria_phage	29.4	3.3e-32
QAY36851.1|327871_328846_+	ParB/RepB/Spo0J family partition protein	NA	Q7Y3Y7	Yersinia_phage	30.1	6.2e-21
QAY36852.1|328966_331084_+|tRNA	tRNA(Met) cytidine acetyltransferase	tRNA	NA	NA	NA	NA
QAY36853.1|331067_331814_+	phosphatase	NA	NA	NA	NA	NA
QAY36854.1|332728_334654_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
QAY36855.1|334894_335533_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
QAY37433.1|335554_336238_-	helix-turn-helix transcriptional regulator	NA	A2I306	Vibrio_virus	37.3	2.0e-34
QAY36856.1|336757_337969_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36857.1|338355_339123_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QAY36858.1|339412_342556_+	bifunctional proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase PutA	NA	NA	NA	NA	NA
QAY36859.1|342558_343221_+	hypothetical protein	NA	NA	NA	NA	NA
QAY37434.1|343389_344886_+	sodium/proline symporter PutP	NA	NA	NA	NA	NA
QAY36860.1|344947_346273_-	HlyC/CorC family transporter	NA	NA	NA	NA	NA
QAY36861.1|346403_347462_-	succinylglutamate desuccinylase/aspartoacylase family protein	NA	NA	NA	NA	NA
QAY36862.1|347805_349146_-	peptidase M23	NA	G9BW84	Planktothrix_phage	41.3	1.4e-18
QAY36863.1|349412_349850_+	riboflavin-specific deaminase	NA	A0A1V0SE20	Indivirus	43.8	7.8e-24
QAY36864.1|349971_353910_-	AsmA family protein	NA	NA	NA	NA	NA
QAY36865.1|355362_356127_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.2	1.4e-36
QAY36866.1|356498_357896_+	c-type cytochrome	NA	NA	NA	NA	NA
QAY36867.1|357955_358285_-	sulfur reduction protein DsrE	NA	NA	NA	NA	NA
QAY36868.1|359661_360576_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36869.1|360952_361279_+	hypothetical protein	NA	NA	NA	NA	NA
QAY36870.1|361564_363364_-	ATP-binding protein	NA	NA	NA	NA	NA
QAY36871.1|363364_364558_-	hypothetical protein	NA	NA	NA	NA	NA
QAY36872.1|364766_365336_-	SLATT domain-containing protein	NA	NA	NA	NA	NA
QAY36873.1|367230_369732_-	phosphoenolpyruvate--protein phosphotransferase	NA	A0A1V0SGR7	Hokovirus	33.7	3.9e-19
QAY36874.1|369755_370073_-	PTS fructose transporter subunit IIB	NA	NA	NA	NA	NA
QAY36875.1|370463_371051_-	uracil-DNA glycosylase family protein	NA	NA	NA	NA	NA
QAY36876.1|371434_373948_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
QAY37435.1|374097_376815_+	glycoside hydrolase family 92 protein	NA	NA	NA	NA	NA
QAY36877.1|377343_377853_+	N-acetyltransferase	NA	NA	NA	NA	NA
QAY36878.1|378232_379264_-|transposase	IS630 family transposase	transposase	NA	NA	NA	NA
QAY36879.1|382470_383267_-|transposase	IS5 family transposase	transposase	A0A0M5M147	Mycobacterium_phage	37.3	1.4e-31
>prophage 1
CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	73113	0	15113	73113		uncultured_Caudovirales_phage(50.0%)	12	NA	NA
QAY37550.1|304_946_+	resolvase	NA	NA	NA	NA	NA
QAY37551.1|2365_2794_-	hypothetical protein	NA	NA	NA	NA	NA
QAY37552.1|3464_4400_-	DUF535 domain-containing protein	NA	NA	NA	NA	NA
QAY37598.1|5374_5590_-	DNA-binding protein	NA	NA	NA	NA	NA
QAY37553.1|5865_7455_+	amino acid permease	NA	NA	NA	NA	NA
QAY37554.1|7552_8911_+	phosphatidylserine decarboxylase family protein	NA	NA	NA	NA	NA
QAY37555.1|8989_9415_+	diguanylate cyclase	NA	NA	NA	NA	NA
QAY37556.1|9485_9764_+	hypothetical protein	NA	NA	NA	NA	NA
QAY37557.1|10344_11448_+	Fic family protein	NA	NA	NA	NA	NA
QAY37558.1|12376_12697_-	hypothetical protein	NA	NA	NA	NA	NA
QAY37559.1|12715_13492_-	ParA family protein	NA	A0A2H4JGZ2	uncultured_Caudovirales_phage	28.5	2.2e-13
QAY37560.1|14240_15113_-	replication protein RepA	NA	A0A1B0VDL5	Salmonella_phage	37.5	4.1e-40
>prophage 2
CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	73113	19047	19494	73113		Vibrio_phage(100.0%)	1	NA	NA
QAY37563.1|19047_19494_+	hypothetical protein	NA	A0A0S1WF56	Vibrio_phage	36.4	3.0e-15
>prophage 3
CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	73113	23518	24295	73113		uncultured_Caudovirales_phage(100.0%)	1	NA	NA
QAY37568.1|23518_24295_-	ParA family protein	NA	A0A2H4JGZ2	uncultured_Caudovirales_phage	28.5	2.2e-13
>prophage 4
CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	73113	35469	37700	73113	transposase	Escherichia_phage(66.67%)	3	NA	NA
QAY37572.1|35469_35853_+|transposase	IS30 family transposase	transposase	W5R8L2	Staphylococcus_phage	35.1	4.2e-05
QAY37573.1|35911_36955_+|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	42.6	1.5e-73
QAY37574.1|36941_37700_+	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.5e-75
>prophage 5
CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	73113	41881	43081	73113		Morganella_phage(100.0%)	3	NA	NA
QAY37577.1|41881_42094_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	61.4	4.4e-17
QAY37578.1|42319_42529_-	hypothetical protein	NA	NA	NA	NA	NA
QAY37579.1|42868_43081_-	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	68.6	4.3e-20
>prophage 6
CP035460	Photobacterium damselae subsp. damselae strain KC-Na-NB1 plasmid pFPPDNB1-2, complete sequence	73113	49816	51605	73113	transposase	Escherichia_phage(100.0%)	2	NA	NA
QAY37585.1|49816_50575_-	AAA family ATPase	NA	A0A2L1IVB6	Escherichia_phage	62.0	1.5e-75
QAY37586.1|50561_51605_-|transposase	IS21 family transposase	transposase	A0A2L1IVA1	Escherichia_phage	42.6	1.5e-73
