assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004124275.1_ASM412427v1	CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	2	3010476-3010568	2	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	Orphan	TGTGTCGATTATGGACTTGAGAG	23	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	NA|65aa|up_2|CP027218.1_3007765_3007960_-,NA	NA|183aa|up_9|CP027218.1_2987517_2988066_+	pfam04612, T2SSM, Type II secretion system (T2SS), protein M	NA|791aa|up_8|CP027218.1_2988062_2990435_+	TIGR02517, Putative_type_II_secretion_system_protein_D, type II secretion system protein D	NA|469aa|up_7|CP027218.1_2990586_2991993_+	TIGR02533, Type_II_secretion_system_protein_E, type II secretion system protein E	NA|404aa|up_6|CP027218.1_2991992_2993204_+	TIGR02120, Putative_general_secretion_pathway_protein_F, type II secretion system protein F	NA|368aa|up_5|CP027218.1_2993672_2994776_+	cd13565, PBP2_PstS, Substrate binding domain of ABC-type phosphate transporter, a member of the type 2 periplasmic-binding fold superfamily	NA|4159aa|up_4|CP027218.1_2994967_3007444_+	pfam12545, DUF3739, Filamentous haemagglutinin family outer membrane protein	NA|93aa|up_3|CP027218.1_3007497_3007776_-	pfam05016, ParE_toxin, ParE toxin of type II toxin-antitoxin system, parDE	NA|65aa|up_2|CP027218.1_3007765_3007960_-	NA	NA|316aa|up_1|CP027218.1_3008214_3009162_-	COG4313, COG4313, Protein involved in meta-pathway of phenol degradation [Energy production and conversion]	NA|366aa|up_0|CP027218.1_3009372_3010470_+	pfam12625, Arabinose_bd, Arabinose-binding domain of AraC transcription regulator, N-term	NA|296aa|down_0|CP027218.1_3010782_3011670_+	TIGR01413, Probable_deferrochelatase/peroxidase_EfeN, Dyp-type peroxidase family	NA|322aa|down_1|CP027218.1_3011680_3012646_+	COG0673, MviM, Predicted dehydrogenases and related proteins [General function prediction only]	NA|251aa|down_2|CP027218.1_3012829_3013582_+	COG2188, PhnF, Transcriptional regulators [Transcription]	NA|577aa|down_3|CP027218.1_3013578_3015309_+	PRK08275, PRK08275, putative oxidoreductase; Provisional	NA|82aa|down_4|CP027218.1_3015336_3015582_+	COG1146, COG1146, Ferredoxin [Energy production and conversion]	NA|468aa|down_5|CP027218.1_3015829_3017233_+	cd13559, PBP2_SsuA_like_3, Putative substrate binding domain of sulfonate binding protein-like, the type 2 periplasmic binding protein fold	NA|261aa|down_6|CP027218.1_3017488_3018271_+	COG0600, TauC, ABC-type nitrate/sulfonate/bicarbonate transport system, permease component [Inorganic ion transport and metabolism]	NA|283aa|down_7|CP027218.1_3018270_3019119_+	COG1116, TauB, ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]	NA|321aa|down_8|CP027218.1_3019115_3020078_+	COG1413, COG1413, FOG: HEAT repeat [Energy production and conversion]	NA|91aa|down_9|CP027218.1_3020074_3020347_+	pfam06155, DUF971, Protein of unknown function (DUF971)
GCA_004124275.1_ASM412427v1	CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	3	3870365-3870479	3	CRISPRCasFinder	no	DEDDh	cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	Unclear	TCAGTCCCCTCTCCCCCCGGGAGAGGGTTAGGGTGAGGGG	40	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	NA|77aa|up_9|CP027218.1_3860022_3860253_+,NA|193aa|down_7|CP027218.1_3880085_3880664_-	NA|77aa|up_9|CP027218.1_3860022_3860253_+	NA	NA|298aa|up_8|CP027218.1_3860338_3861232_+	cd08415, PBP2_LysR_opines_like, The C-terminal substrate-domain of LysR-type transcriptional regulators involved in the catabolism of opines and that of related regulators, contains the type 2 periplasmic binding fold	NA|205aa|up_7|CP027218.1_3861197_3861812_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|752aa|up_6|CP027218.1_3861826_3864082_-	PRK15399, PRK15399, lysine decarboxylase	NA|324aa|up_5|CP027218.1_3864452_3865424_+	pfam01548, DEDD_Tnp_IS110, Transposase	DEDDh|253aa|up_4|CP027218.1_3865495_3866254_-	PRK05711, PRK05711, DNA polymerase III subunit epsilon; Provisional	NA|157aa|up_3|CP027218.1_3866455_3866926_-	PRK00203, rnhA, ribonuclease H; Reviewed	NA|253aa|up_2|CP027218.1_3867017_3867776_-	pfam08241, Methyltransf_11, Methyltransferase domain	NA|256aa|up_1|CP027218.1_3867842_3868610_+	TIGR03413, GSH_gloB, hydroxyacylglutathione hydrolase	NA|488aa|up_0|CP027218.1_3868709_3870173_+	PRK10783, mltD, membrane-bound lytic murein transglycosylase D; Provisional	NA|611aa|down_0|CP027218.1_3870563_3872396_+	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|614aa|down_1|CP027218.1_3872392_3874234_+	cd08497, PBP2_NikA_DppA_OppA_like_14, The substrate-binding component of an uncharacterized ABC-type nickel/dipeptide/oligopeptide-like import system contains the type 2 periplasmic binding fold	NA|358aa|down_2|CP027218.1_3874238_3875312_+	COG4174, COG4174, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|340aa|down_3|CP027218.1_3875313_3876333_+	COG4239, COG4239, ABC-type uncharacterized transport system, permease component [General function prediction only]	NA|537aa|down_4|CP027218.1_3876334_3877945_+	COG4172, COG4172, ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]	NA|265aa|down_5|CP027218.1_3877964_3878759_+	COG0623, FabI, Enoyl-[acyl-carrier-protein]	NA|322aa|down_6|CP027218.1_3879056_3880022_-	cd01949, GGDEF, Diguanylate-cyclase (DGC) or GGDEF domain	NA|193aa|down_7|CP027218.1_3880085_3880664_-	NA	NA|721aa|down_8|CP027218.1_3880665_3882828_-	COG1529, CoxL, Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs [Energy production and conversion]	NA|152aa|down_9|CP027218.1_3882847_3883303_-	COG2080, CoxS, Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs [Energy production and conversion]
GCA_004124275.1_ASM412427v1	CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	4	4225477-4225582	4	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	Orphan	GCCAACTGCGCAAGAAGTTGCGCA	24	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	NA,NA|129aa|down_4|CP027218.1_4233846_4234233_+,NA|125aa|down_7|CP027218.1_4235478_4235853_+,NA|342aa|down_8|CP027218.1_4235978_4237004_+	NA|450aa|up_9|CP027218.1_4213102_4214452_+	COG0531, PotE, Amino acid transporters [Amino acid transport and metabolism]	NA|339aa|up_8|CP027218.1_4214569_4215586_+	pfam04958, AstA, Arginine N-succinyltransferase beta subunit	NA|345aa|up_7|CP027218.1_4215647_4216682_+	pfam04958, AstA, Arginine N-succinyltransferase beta subunit	NA|290aa|up_6|CP027218.1_4216901_4217771_+	COG2513, PrpB, PEP phosphonomutase and related enzymes [Carbohydrate transport and metabolism]	NA|412aa|up_5|CP027218.1_4217893_4219129_-	PRK06133, PRK06133, glutamate carboxypeptidase; Reviewed	NA|357aa|up_4|CP027218.1_4219372_4220443_-	PRK10245, adrA, diguanylate cyclase AdrA; Provisional	NA|485aa|up_3|CP027218.1_4220718_4222173_+	COG2072, TrkA, Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]	NA|310aa|up_2|CP027218.1_4222194_4223124_+	PRK14875, PRK14875, acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional	NA|460aa|up_1|CP027218.1_4223243_4224623_+	cd16348, VOC_YdcJ_like, uncharacterized metal-dependent enzyme similar to Shigella flexneri YdcJ	NA|226aa|up_0|CP027218.1_4224691_4225369_-	cd03141, GATase1_Hsp31_like, Type 1 glutamine amidotransferase (GATase1)-like domain found in proteins similar to Escherichia coli Hsp31 protein	NA|172aa|down_0|CP027218.1_4225773_4226289_+	TIGR03344, VI_effect_Hcp1, type VI secretion system effector, Hcp1 family	NA|681aa|down_1|CP027218.1_4226380_4228423_+	TIGR03361, VI_Rhs_Vgr, type VI secretion system Vgr family protein	NA|246aa|down_2|CP027218.1_4228412_4229150_+	pfam13503, DUF4123, Domain of unknown function (DUF4123)	NA|1158aa|down_3|CP027218.1_4230376_4233850_+	COG3209, RhsA, Rhs family protein [Cell envelope biogenesis, outer membrane]	NA|129aa|down_4|CP027218.1_4233846_4234233_+	NA	NA|135aa|down_5|CP027218.1_4234405_4234810_+	pfam13646, HEAT_2, HEAT repeats	NA|98aa|down_6|CP027218.1_4235081_4235375_+	cd05142, Barstar, Barstar is an intracellular inhibitor of barnase, an extracellular ribonuclease of Bacillus amyloliquefaciens	NA|125aa|down_7|CP027218.1_4235478_4235853_+	NA	NA|342aa|down_8|CP027218.1_4235978_4237004_+	NA	NA|325aa|down_9|CP027218.1_4237074_4238049_-	sd00010, SLR, Sel1-like repeat
GCA_004124275.1_ASM412427v1	CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	5	4514082-4514210	5	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	Orphan	GTAGGAGCTGCCGCAGGCTGCGATCTTTTGATGTTGTTTTAAAAAGAC	48	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	NA|180aa|up_9|CP027218.1_4506373_4506913_+,NA|114aa|up_8|CP027218.1_4506909_4507251_+,NA|192aa|up_7|CP027218.1_4507247_4507823_+,NA	NA|180aa|up_9|CP027218.1_4506373_4506913_+	NA	NA|114aa|up_8|CP027218.1_4506909_4507251_+	NA	NA|192aa|up_7|CP027218.1_4507247_4507823_+	NA	NA|310aa|up_6|CP027218.1_4507857_4508787_+	cd01017, AdcA, Metal binding protein AdcA	NA|282aa|up_5|CP027218.1_4508783_4509629_+	COG1121, ZnuC, ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]	NA|300aa|up_4|CP027218.1_4509628_4510528_+	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|302aa|up_3|CP027218.1_4510528_4511434_+	COG0803, LraI, ABC-type metal ion transport system, periplasmic component/surface adhesin [Inorganic ion transport and metabolism]	NA|75aa|up_2|CP027218.1_4511621_4511846_-	COG3251, COG3251, Uncharacterized protein conserved in bacteria [Function unknown]	NA|471aa|up_1|CP027218.1_4511929_4513342_-	PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate aminotransferase; Provisional	NA|162aa|up_0|CP027218.1_4513485_4513971_-	pfam13673, Acetyltransf_10, Acetyltransferase (GNAT) domain	NA|441aa|down_0|CP027218.1_4514258_4515581_-	PRK10337, PRK10337, sensor protein QseC; Provisional	NA|227aa|down_1|CP027218.1_4515580_4516261_-	PRK10643, PRK10643, two-component system response regulator PmrA	NA|578aa|down_2|CP027218.1_4516415_4518149_+	PRK00293, dipZ, thiol:disulfide interchange protein precursor; Provisional	NA|294aa|down_3|CP027218.1_4518148_4519030_+	cd02966, TlpA_like_family, TlpA-like family; composed of  TlpA, ResA, DsbE and similar proteins	NA|257aa|down_4|CP027218.1_4519005_4519776_+	PRK11657, dsbG, disulfide isomerase/thiol-disulfide oxidase; Provisional	NA|275aa|down_5|CP027218.1_4519886_4520711_-	TIGR02427, b-ketoadipate_enol-lactone_hydrolase, 3-oxoadipate enol-lactonase	NA|4333aa|down_6|CP027218.1_4520903_4533902_-	PRK05691, PRK05691, peptide synthase; Validated	NA|185aa|down_7|CP027218.1_4534273_4534828_+	PRK07037, PRK07037, extracytoplasmic-function sigma-70 factor; Validated	NA|338aa|down_8|CP027218.1_4534921_4535935_-	pfam13523, Acetyltransf_8, Acetyltransferase (GNAT) domain	NA|266aa|down_9|CP027218.1_4536022_4536820_-	COG0834, HisJ, ABC-type amino acid transport/signal transduction systems, periplasmic component/domain [Amino acid transport and metabolism / Signal transduction mechanisms]
GCA_004124275.1_ASM412427v1	CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	6	4936849-4936947	6	CRISPRCasFinder	no		cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	Orphan	ATTGATTTTGTGTGCGACTCGGACACTGTGG	31	0	0	NA	NA	NA	1	1	Orphan	cas3,PD-DExK,DEDDh,csa3,RT,WYL,DinG	NA,NA	NA|376aa|up_9|CP027218.1_4926223_4927351_+	cd08601, GDPD_SaGlpQ_like, Glycerophosphodiester phosphodiesterase domain of Staphylococcus aureus and similar proteins	NA|102aa|up_8|CP027218.1_4927513_4927819_+	COG3212, COG3212, Predicted membrane protein [Function unknown]	NA|149aa|up_7|CP027218.1_4928121_4928568_-	pfam12761, End3, Actin cytoskeleton-regulatory complex protein END3	NA|541aa|up_6|CP027218.1_4928678_4930301_-	COG0840, Tar, Methyl-accepting chemotaxis protein [Cell motility and secretion / Signal transduction mechanisms]	NA|341aa|up_5|CP027218.1_4930579_4931602_+	cd12834, ZntB_u1, Uncharacterized bacterial subgroup of the Salmonella typhimurium Zn2+ transporter ZntB-like subfamily	NA|538aa|up_4|CP027218.1_4931803_4933417_+	COG0306, PitA, Phosphate/sulphate permeases [Inorganic ion transport and metabolism]	NA|299aa|up_3|CP027218.1_4933524_4934421_-	cd08472, PBP2_CrgA_like_3, The C-terminal substrate binding domain of an uncharacterized LysR-type transcriptional regulator CrgA-like, contains the type 2 periplasmic binding fold	NA|253aa|up_2|CP027218.1_4934543_4935302_+	cd05362, THN_reductase-like_SDR_c, tetrahydroxynaphthalene/trihydroxynaphthalene reductase-like, classical (c) SDRs	NA|146aa|up_1|CP027218.1_4935417_4935855_-	COG4125, COG4125, Predicted membrane protein [Function unknown]	NA|285aa|up_0|CP027218.1_4935943_4936798_+	COG0583, LysR, Transcriptional regulator [Transcription]	NA|285aa|down_0|CP027218.1_4936970_4937825_-	COG0583, LysR, Transcriptional regulator [Transcription]	NA|242aa|down_1|CP027218.1_4937936_4938662_+	COG4221, COG4221, Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]	NA|414aa|down_2|CP027218.1_4938839_4940081_-	COG4941, COG4941, Predicted RNA polymerase sigma factor containing a TPR repeat domain [Transcription]	NA|115aa|down_3|CP027218.1_4940073_4940418_-	COG3795, COG3795, Uncharacterized protein conserved in bacteria [Function unknown]	NA|142aa|down_4|CP027218.1_4940458_4940884_-	COG4319, COG4319, Ketosteroid isomerase homolog [Function unknown]	NA|162aa|down_5|CP027218.1_4941023_4941509_+	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|202aa|down_6|CP027218.1_4941527_4942133_+	TIGR04025, hypothetical_protein, PPOX class probable FMN-dependent enzyme, DR_2398 family	NA|163aa|down_7|CP027218.1_4942269_4942758_-	pfam00583, Acetyltransf_1, Acetyltransferase (GNAT) family	NA|166aa|down_8|CP027218.1_4943069_4943567_-	COG3708, COG3708, Uncharacterized protein conserved in bacteria [Function unknown]	NA|221aa|down_9|CP027218.1_4943634_4944297_-	pfam01810, LysE, LysE type translocator
