The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	6268469	1560856	1674592	6268469	tail,lysis,plate,tRNA,holin	Pseudomonas_phage(40.0%)	116	NA	NA
QAX83610.1|1560856_1561675_+|tRNA	tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA	tRNA	S4VW33	Pandoravirus	28.0	3.5e-09
QAX83611.1|1561815_1562226_-	Fe-S metabolism protein SufE	NA	NA	NA	NA	NA
QAX83612.1|1562222_1563428_-	cysteine desulfurase CsdA	NA	Q2XUY6	environmental_halophage	36.1	7.5e-69
QAX83613.1|1563559_1564594_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
QAX83614.1|1564627_1565065_-	ArsC family reductase	NA	NA	NA	NA	NA
QAX83615.1|1565283_1566915_+	Na+/H+ antiporter	NA	NA	NA	NA	NA
QAX83616.1|1566946_1567684_-	hypothetical protein	NA	NA	NA	NA	NA
QAX83617.1|1567717_1568452_-	hypothetical protein	NA	NA	NA	NA	NA
QAX83618.1|1568641_1569838_-	succinyldiaminopimelate transaminase	NA	NA	NA	NA	NA
QAX83619.1|1569881_1572584_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
QAX83620.1|1572625_1573408_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
QAX83621.1|1573781_1574519_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
QAX83622.1|1574711_1575575_+	elongation factor Ts	NA	NA	NA	NA	NA
QAX83623.1|1575784_1576528_+	UMP kinase	NA	NA	NA	NA	NA
QAX83624.1|1576524_1577082_+	ribosome recycling factor	NA	NA	NA	NA	NA
QAX83625.1|1577096_1577852_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	38.1	8.5e-18
QAX83626.1|1577851_1578658_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
QAX83627.1|1578654_1579845_+	1-deoxy-D-xylulose-5-phosphate reductoisomerase	NA	NA	NA	NA	NA
QAX83628.1|1579899_1581252_+	zinc metallopeptidase RseP	NA	NA	NA	NA	NA
QAX83629.1|1581326_1583702_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
QAX83630.1|1583747_1584251_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83631.1|1584254_1585310_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
QAX83632.1|1585416_1585857_+	beta-hydroxyacyl-ACP dehydratase	NA	NA	NA	NA	NA
QAX83633.1|1585853_1586630_+	acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
QAX83634.1|1586632_1587760_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
QAX83635.1|1587774_1588401_+	ribonuclease HII	NA	V5LS49	Emiliania_huxleyi_virus	38.9	3.7e-27
QAX83636.1|1588477_1591999_+	DNA polymerase III subunit alpha	NA	A0A2L1IZ23	Streptomyces_phage	37.0	8.6e-198
QAX83637.1|1592138_1593086_+	acetyl-CoA carboxylase carboxyl transferase subunit alpha	NA	NA	NA	NA	NA
QAX83638.1|1593194_1594523_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	M1I5D7	Paramecium_bursaria_Chlorella_virus	24.5	4.5e-06
QAX83639.1|1594797_1596429_+	CTP synthetase	NA	A0A1J0FA14	Only_Syngen_Nebraska_virus	52.9	4.5e-157
QAX83640.1|1596433_1597279_+	3-deoxy-8-phosphooctulonate synthase	NA	E3T537	Cafeteria_roenbergensis_virus	42.8	1.6e-49
QAX83641.1|1597435_1598725_+	phosphopyruvate hydratase	NA	A0A1X9I5Z8	Streptococcus_phage	59.7	4.8e-138
QAX83642.1|1598896_1599175_+	cell division protein FtsB	NA	NA	NA	NA	NA
QAX83643.1|1599171_1599879_+	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase	NA	NA	NA	NA	NA
QAX83644.1|1600022_1600919_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAX83645.1|1601035_1602148_+	S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase	NA	E3SJ82	Synechococcus_phage	30.1	1.6e-33
QAX83646.1|1602243_1603089_+	S-formylglutathione hydrolase	NA	NA	NA	NA	NA
QAX83647.1|1603133_1603607_+	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase	NA	NA	NA	NA	NA
QAX83648.1|1603603_1604662_+|tRNA	tRNA pseudouridine(13) synthase TruD	tRNA	NA	NA	NA	NA
QAX83649.1|1604649_1605399_+	5'/3'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	52.2	3.7e-66
QAX83650.1|1605398_1606076_+	protein-L-isoaspartate O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	49.8	4.0e-43
QAX83651.1|1606286_1607156_+	peptigoglycan-binding protein LysM	NA	A0A0S2SXL7	Bacillus_phage	33.3	6.5e-06
QAX83652.1|1607262_1608273_+	RNA polymerase sigma factor RpoS	NA	G8CLC7	Synechococcus_phage	35.8	6.6e-34
QAX83653.1|1608814_1609138_-	ferredoxin family protein	NA	NA	NA	NA	NA
QAX83654.1|1609301_1611884_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	23.8	1.6e-28
QAX83655.1|1612123_1612873_+	DNA-binding protein	NA	NA	NA	NA	NA
QAX83656.1|1612839_1613331_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83657.1|1613880_1614261_+	DUF1090 domain-containing protein	NA	NA	NA	NA	NA
QAX83658.1|1614253_1614865_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83659.1|1614917_1615100_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83660.1|1615238_1615973_+	transcriptional regulator	NA	B5TK58	Pseudomonas_phage	91.8	1.7e-127
QAX83661.1|1616522_1616969_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83662.1|1617100_1617517_+|tail	tail assembly chaperone	tail	NA	NA	NA	NA
QAX83663.1|1617691_1618120_+|tail	phage tail protein	tail	NA	NA	NA	NA
QAX83664.1|1618242_1618581_+|holin	pyocin R2, holin	holin	B5TK61	Pseudomonas_phage	86.6	2.2e-50
QAX83665.1|1618651_1619164_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83666.1|1619167_1619776_+|plate	phage baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	52.4	6.1e-43
QAX83667.1|1619790_1620123_+|plate	phage baseplate protein	plate	A0A2H4JI46	uncultured_Caudovirales_phage	69.1	7.9e-37
QAX83668.1|1620119_1621115_+|plate	baseplate J protein	plate	A0A2H4JC04	uncultured_Caudovirales_phage	63.8	6.6e-111
QAX83669.1|1621111_1621747_+|tail	phage tail protein I	tail	A0A2H4JDK0	uncultured_Caudovirales_phage	52.9	9.9e-44
QAX83670.1|1621747_1624195_+|tail	phage tail protein	tail	A0A077K818	Ralstonia_phage	38.1	1.2e-86
QAX83671.1|1624210_1624639_+|tail	phage tail protein	tail	Q9ZXK5	Pseudomonas_virus	44.9	7.9e-21
QAX83672.1|1624740_1624926_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83673.1|1624928_1626095_+|tail	phage tail protein	tail	B0ZSG8	Halomonas_phage	57.0	8.5e-126
QAX83674.1|1626094_1626601_+|tail	phage tail protein	tail	Q6R4W3	Vibrio_virus	36.3	1.8e-24
QAX83675.1|1626783_1627365_+|tail	phage tail assembly protein	tail	B0ZSH0	Halomonas_phage	35.4	5.0e-26
QAX83676.1|1627494_1629474_+|tail	phage tail tape measure protein	tail	NA	NA	NA	NA
QAX83677.1|1629470_1629854_+	hypothetical protein	NA	A0A2H4JAC8	uncultured_Caudovirales_phage	52.8	2.1e-33
QAX83678.1|1629846_1630059_+|tail	phage tail protein	tail	A0A2H4JGD9	uncultured_Caudovirales_phage	61.4	4.4e-17
QAX83679.1|1630068_1631100_+|tail	phage tail protein	tail	B0ZSH3	Halomonas_phage	51.1	7.6e-94
QAX83680.1|1631272_1631857_+	hypothetical protein	NA	B5TK65	Pseudomonas_phage	78.4	1.2e-83
QAX83681.1|1631853_1632036_+	DUF2635 domain-containing protein	NA	B5TK66	Pseudomonas_phage	88.3	2.7e-23
QAX83682.1|1632035_1633532_+|tail	phage tail protein	tail	B5TK67	Pseudomonas_phage	91.8	1.4e-261
QAX83683.1|1633599_1633947_+|tail	phage tail protein	tail	B5TK68	Pseudomonas_phage	93.9	3.8e-58
QAX83684.1|1633943_1634240_+|tail	phage tail assembly protein	tail	B5TK69	Pseudomonas_phage	90.8	2.8e-41
QAX83685.1|1634370_1635951_+|tail	phage tail protein	tail	B5TK70	Pseudomonas_phage	65.6	3.3e-88
QAX83686.1|1635937_1637173_+	hydroxyacid dehydrogenase	NA	B5TK71	Pseudomonas_phage	66.5	2.2e-156
QAX83687.1|1637176_1638223_+|plate	baseplate protein	plate	B5TK72	Pseudomonas_phage	80.6	3.4e-158
QAX83688.1|1638337_1638847_+|plate	phage baseplate assembly protein V	plate	B5TK73	Pseudomonas_phage	85.2	2.4e-77
QAX83689.1|1638846_1639245_+	hypothetical protein	NA	B5TK74	Pseudomonas_phage	93.2	1.8e-67
QAX83690.1|1639234_1640275_+|plate	baseplate J protein	plate	B5TK75	Pseudomonas_phage	80.6	2.3e-154
QAX83691.1|1640265_1640865_+	DUF2313 domain-containing protein	NA	B5TK76	Pseudomonas_phage	89.4	2.3e-103
QAX83692.1|1641816_1642206_+	hypothetical protein	NA	A0A291LAV4	Bordetella_phage	41.6	1.1e-08
QAX83693.1|1642348_1643386_+|tail	phage tail protein	tail	B5TK79	Pseudomonas_phage	58.1	3.6e-112
QAX83694.1|1643429_1644014_+|tail	phage tail protein	tail	B5TK80	Pseudomonas_phage	40.7	1.8e-39
QAX83695.1|1644096_1645020_+	hypothetical protein	NA	B5TK77	Pseudomonas_phage	72.7	1.7e-20
QAX83696.1|1645019_1645487_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83697.1|1645526_1646453_+|tail	phage tail protein	tail	B5TK81	Pseudomonas_phage	37.8	1.3e-33
QAX83698.1|1646455_1646896_+	hypothetical protein	NA	Q9ZXK5	Pseudomonas_virus	41.3	1.7e-18
QAX83699.1|1646938_1648141_+	carbohydrate-binding protein CenC	NA	B5TK77	Pseudomonas_phage	68.7	1.1e-19
QAX83700.1|1648150_1648369_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83701.1|1648405_1648972_+	lysozyme	NA	B5TK83	Pseudomonas_phage	83.2	8.4e-87
QAX83702.1|1648950_1649469_+|lysis	lysis protein	lysis	B5TK84	Pseudomonas_phage	72.9	4.8e-57
QAX83703.1|1649536_1650037_+	damage-inducible protein CinA	NA	B5TK85	Pseudomonas_phage	88.0	9.4e-74
QAX83704.1|1650120_1651182_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	61.8	7.8e-110
QAX83705.1|1651190_1651661_+	recombination regulator RecX	NA	NA	NA	NA	NA
QAX83706.1|1651716_1652835_-	TIGR00730 family Rossman fold protein	NA	NA	NA	NA	NA
QAX83707.1|1653187_1653382_+	hypothetical protein	NA	NA	NA	NA	NA
QAX83708.1|1653382_1653808_-	hypothetical protein	NA	NA	NA	NA	NA
QAX83709.1|1653997_1654744_+	DTW domain-containing protein	NA	NA	NA	NA	NA
QAX83710.1|1654967_1655618_+	DNA-binding response regulator	NA	NA	NA	NA	NA
QAX83711.1|1655692_1656055_+	diacylglycerol kinase	NA	NA	NA	NA	NA
QAX83712.1|1656051_1656978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAX83713.1|1657111_1657891_+	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
QAX87674.1|1658065_1658764_-|tRNA	tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO	tRNA	NA	NA	NA	NA
QAX83714.1|1658885_1659656_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
QAX83715.1|1659784_1660255_-	DUF1456 domain-containing protein	NA	Q9EYF4	Enterobacteria_phage	51.3	1.0e-37
QAX83716.1|1660327_1661038_-	RNA-binding protein	NA	NA	NA	NA	NA
QAX83717.1|1661229_1661703_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAX83718.1|1661912_1663250_-	30S ribosomal protein S12 methylthiotransferase RimO	NA	NA	NA	NA	NA
QAX83719.1|1663539_1665441_+	potassium transporter Kup	NA	M1HZV6	Acanthocystis_turfacea_Chlorella_virus	34.6	9.7e-79
QAX83720.1|1665885_1667181_-	virulence factor family protein	NA	NA	NA	NA	NA
QAX83721.1|1667180_1669820_-	hypothetical protein	NA	NA	NA	NA	NA
QAX83722.1|1670755_1671817_+	DNA polymerase IV	NA	NA	NA	NA	NA
QAX83723.1|1671905_1672859_-	hypothetical protein	NA	NA	NA	NA	NA
QAX83724.1|1672876_1674592_-|tRNA	proline--tRNA ligase	tRNA	A0A2K9L0T2	Tupanvirus	25.4	1.5e-06
>prophage 2
CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	6268469	4056276	4062507	6268469	tRNA	uncultured_Caudovirales_phage(83.33%)	8	NA	NA
QAX87746.1|4056276_4056669_+	sulfurtransferase complex subunit TusD	NA	A0A2H4JA39	uncultured_Caudovirales_phage	76.7	7.9e-52
QAX85699.1|4056670_4057027_+	sulfurtransferase complex subunit TusC	NA	A0A2H4J8C0	uncultured_Caudovirales_phage	65.0	5.0e-37
QAX85700.1|4057026_4057320_+	sulfurtransferase complex subunit TusB	NA	A0A2H4JG28	uncultured_Caudovirales_phage	63.6	7.5e-31
QAX85701.1|4057316_4057652_+	sulfurtransferase TusE	NA	A0A2H4J8B6	uncultured_Caudovirales_phage	77.5	8.0e-45
QAX85702.1|4057648_4058650_+	glycosyl transferase family protein	NA	A0A2H4JBY5	uncultured_Caudovirales_phage	84.5	1.8e-161
QAX85703.1|4058741_4059743_+	glutathione-dependent reductase	NA	NA	NA	NA	NA
QAX85704.1|4059831_4061226_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
QAX85705.1|4061226_4062507_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	53.6	1.4e-97
>prophage 3
CP027218	Pseudomonas sp. DTU12.3 chromosome, complete genome	6268469	5906943	5967980	6268469	protease,holin	Burkholderia_phage(28.57%)	51	NA	NA
QAX87311.1|5906943_5907447_-|protease	ATP-dependent zinc protease	protease	NA	NA	NA	NA
QAX87312.1|5907728_5908616_+	acyltransferase	NA	NA	NA	NA	NA
QAX87313.1|5908617_5909175_-	hypothetical protein	NA	NA	NA	NA	NA
QAX87314.1|5909323_5909959_+	RNA polymerase subunit sigma-70	NA	NA	NA	NA	NA
QAX87315.1|5909955_5910630_+	anti-sigma factor	NA	NA	NA	NA	NA
QAX87316.1|5910838_5911153_+	hypothetical protein	NA	NA	NA	NA	NA
QAX87317.1|5911210_5912410_-	formaldehyde dehydrogenase, glutathione-independent	NA	A0A2K9L7I1	Tupanvirus	29.3	1.9e-11
QAX87318.1|5912563_5913421_-	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
QAX87319.1|5913635_5914268_-	sarcosine oxidase subunit gamma	NA	NA	NA	NA	NA
QAX87320.1|5914411_5917429_-	sarcosine oxidase subunit alpha	NA	NA	NA	NA	NA
QAX87321.1|5917425_5917755_-	sarcosine oxidase subunit delta family protein	NA	NA	NA	NA	NA
QAX87322.1|5917769_5919020_-	sarcosine oxidase subunit beta	NA	NA	NA	NA	NA
QAX87323.1|5919040_5920294_-	serine hydroxymethyltransferase	NA	A0A240F3L3	Aeromonas_phage	53.6	1.4e-102
QAX87324.1|5920556_5921267_-	conjugal transfer protein TraX	NA	NA	NA	NA	NA
QAX87325.1|5921393_5922434_+	threonine aldolase	NA	NA	NA	NA	NA
QAX87326.1|5922611_5923436_+	short chain dehydrogenase	NA	NA	NA	NA	NA
QAX87327.1|5923774_5924875_-	hybrid-cluster NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
QAX87328.1|5924904_5925102_+	protein GbcA	NA	NA	NA	NA	NA
QAX87329.1|5925171_5926467_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
QAX87330.1|5926564_5927809_-	metallophosphoesterase	NA	NA	NA	NA	NA
QAX87331.1|5927834_5929703_-	hypothetical protein	NA	NA	NA	NA	NA
QAX87332.1|5929827_5933280_-|holin	choline dehydrogenase	holin	NA	NA	NA	NA
QAX87333.1|5934229_5934796_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAX87334.1|5934950_5935721_-	electron transfer flavoprotein subunit beta	NA	NA	NA	NA	NA
QAX87335.1|5935730_5936951_-	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
QAX87336.1|5936950_5938900_-	(Fe-S)-binding protein	NA	NA	NA	NA	NA
QAX87337.1|5939054_5941115_-	N-methylproline demethylase	NA	NA	NA	NA	NA
QAX87338.1|5941130_5941661_-	hydrocarbon binding protein	NA	NA	NA	NA	NA
QAX87339.1|5941767_5942745_-	peptidase M19	NA	NA	NA	NA	NA
QAX87793.1|5942979_5943381_+	hypothetical protein	NA	NA	NA	NA	NA
QAX87340.1|5943593_5943848_+	cytotoxic translational repressor of toxin-antitoxin stability system	NA	A0A1S5NR91	Burkholderia_phage	64.3	1.3e-23
QAX87341.1|5943831_5944155_+	transcriptional regulator	NA	A0A1S5NNJ5	Burkholderia_phage	66.7	3.7e-31
QAX87342.1|5944184_5944601_+	DUF3010 domain-containing protein	NA	NA	NA	NA	NA
QAX87343.1|5944738_5945683_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QAX87344.1|5945890_5946835_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAX87345.1|5946956_5947844_+	NADPH:quinone reductase	NA	NA	NA	NA	NA
QAX87346.1|5948000_5948966_+	carnitine 3-dehydrogenase	NA	NA	NA	NA	NA
QAX87347.1|5949420_5949897_+	4-hydroxybenzoyl-CoA thioesterase	NA	NA	NA	NA	NA
QAX87348.1|5949921_5951085_+	gamma-butyrobetaine dioxygenase	NA	NA	NA	NA	NA
QAX87349.1|5951431_5951695_+	hypothetical protein	NA	NA	NA	NA	NA
QAX87350.1|5951801_5952905_-	GlxA family transcriptional regulator	NA	NA	NA	NA	NA
QAX87351.1|5953454_5954831_-	L-serine ammonia-lyase	NA	NA	NA	NA	NA
QAX87352.1|5955268_5956216_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAX87794.1|5956282_5957128_+|holin	choline ABC transporter permease subunit	holin	NA	NA	NA	NA
QAX87353.1|5957124_5958303_+|holin	choline ABC transporter ATP-binding protein	holin	G3M9Y6	Bacillus_virus	37.1	2.2e-25
QAX87354.1|5958552_5960550_-	beta-aspartyl-peptidase	NA	A0A2I7QNT1	Vibrio_phage	26.5	1.8e-19
QAX87355.1|5960977_5961571_+	transcriptional regulator BetI	NA	NA	NA	NA	NA
QAX87356.1|5961659_5963132_+	betaine-aldehyde dehydrogenase	NA	NA	NA	NA	NA
QAX87357.1|5963216_5964920_+|holin	choline dehydrogenase	holin	A0A1V0SI18	Klosneuvirus	30.1	3.8e-50
QAX87358.1|5965200_5966643_+	peptidase C69	NA	NA	NA	NA	NA
QAX87359.1|5966642_5967980_+|protease	Zn-dependent protease	protease	NA	NA	NA	NA
