The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	1673483	1682654	4696653	tRNA	Enterobacteria_phage(66.67%)	10	NA	NA
QAX50301.1|1673483_1674431_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.2	1.7e-23
QAX50302.1|1674414_1675146_+	ABC transporter permease	NA	NA	NA	NA	NA
QAX50303.1|1675126_1675234_-	protein YohO	NA	NA	NA	NA	NA
QAX50304.1|1675293_1676025_-	transcriptional regulator	NA	Q9EYF2	Enterobacteria_phage	87.9	4.5e-101
QAX50305.1|1676247_1677933_+	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	91.3	4.8e-279
QAX50306.1|1677929_1678649_+	DNA-binding response regulator	NA	NA	NA	NA	NA
QAX50307.1|1678695_1679163_+	DUF1456 family protein	NA	Q9EYF4	Enterobacteria_phage	90.3	3.9e-74
QAX50308.1|1679219_1679750_-	DUF1307 domain-containing protein	NA	NA	NA	NA	NA
QAX50309.1|1679921_1680380_-	DUF1307 domain-containing protein	NA	Q9EYF5	Enterobacteria_phage	72.5	8.4e-53
QAX50310.1|1680620_1682654_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SDF2	Indivirus	27.6	1.0e-54
>prophage 2
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	1749850	1756147	4696653		Enterobacteria_phage(50.0%)	6	NA	NA
QAX50364.1|1749850_1751254_+	colanic acid biosynthesis protein WcaM	NA	A0A291LBB9	Klebsiella_phage	26.5	4.0e-21
QAX50365.1|1751431_1752325_+	GalU regulator GalF	NA	A0A127AW70	Bacillus_phage	41.9	3.1e-43
QAX50366.1|1752701_1753787_+	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	53.9	1.2e-102
QAX50367.1|1753786_1754686_+	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	36.3	1.4e-30
QAX53125.1|1754733_1755612_+	glucose-1-phosphate thymidylyltransferase RfbA	NA	I7I009	Enterobacteria_phage	64.1	1.7e-107
QAX50368.1|1755616_1756147_+	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	57.6	3.7e-52
>prophage 3
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	1843208	1856510	4696653	transposase	Acidithiobacillus_phage(20.0%)	14	NA	NA
QAX50449.1|1843208_1843733_-	peptidase	NA	G9L6C4	Escherichia_phage	77.9	3.3e-37
QAX50450.1|1844379_1844670_-	DUF4102 domain-containing protein	NA	B7SYF8	Stenotrophomonas_phage	50.9	2.3e-08
QAX50451.1|1845041_1845839_-	DgsA anti-repressor MtfA	NA	NA	NA	NA	NA
QAX50452.1|1846367_1847123_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	44.3	2.8e-45
QAX50453.1|1847139_1848675_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	40.7	8.6e-102
QAX50454.1|1848953_1849115_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50455.1|1849241_1849661_+	protein UmuD	NA	A0A1W6JNS2	Morganella_phage	60.5	8.5e-36
QAX50456.1|1849663_1850932_+	translesion error-prone DNA polymerase V subunit UmuC	NA	I6RSM4	Salmonella_phage	91.9	1.2e-226
QAX50457.1|1851386_1851599_+	cold-shock protein CspJ	NA	A0A1W6JNX5	Morganella_phage	70.0	3.9e-21
QAX53130.1|1851609_1851798_+	cold-shock protein	NA	NA	NA	NA	NA
QAX50458.1|1852058_1853270_-	porin OmpS1	NA	Q1MVN1	Enterobacteria_phage	56.0	1.3e-108
QAX50459.1|1853919_1854231_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50460.1|1854310_1855006_+	phosphohydrolase	NA	S4W232	Pandoravirus	28.0	2.8e-07
QAX50461.1|1855079_1856510_+	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	57.4	1.0e-104
>prophage 4
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	1946028	1993442	4696653	transposase,tail,integrase,protease	Enterobacteria_phage(21.43%)	52	1966226:1966241	1995497:1995512
QAX50554.1|1946028_1947284_-|transposase	IS3 family transposase	transposase	Q6H9S3	Enterobacteria_phage	33.9	2.4e-17
QAX50555.1|1947418_1948861_-	pyruvate kinase II	NA	NA	NA	NA	NA
QAX50556.1|1948984_1949854_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
QAX50557.1|1950037_1950223_-	hypothetical protein	NA	NA	NA	NA	NA
QAX50558.1|1950195_1951671_+	glucose-6-phosphate dehydrogenase	NA	H6WFS4	Cyanophage	37.5	2.6e-79
QAX50559.1|1951905_1953717_+	phosphogluconate dehydratase	NA	NA	NA	NA	NA
QAX50560.1|1953754_1954396_+	keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase	NA	NA	NA	NA	NA
QAX50561.1|1954495_1955674_-	formate-dependent phosphoribosylglycinamide formyltransferase	NA	NA	NA	NA	NA
QAX50562.1|1955804_1956095_+	DNA damage-inducible protein YebG	NA	NA	NA	NA	NA
QAX50563.1|1956162_1956516_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50564.1|1956609_1957269_+	tellurite resistance TerB family protein	NA	NA	NA	NA	NA
QAX50565.1|1957481_1959533_+	oligopeptidase B	NA	NA	NA	NA	NA
QAX50566.1|1959569_1960268_-	exodeoxyribonuclease X	NA	Q6UAU3	Klebsiella_phage	40.4	2.8e-07
QAX50567.1|1960291_1960948_-	carbon-nitrogen hydrolase family protein	NA	NA	NA	NA	NA
QAX50568.1|1961055_1961286_-	DNA polymerase III subunit theta	NA	H9C187	Pectobacterium_phage	60.3	2.9e-14
QAX50569.1|1961423_1961798_+	CopC domain-containing protein YobA	NA	NA	NA	NA	NA
QAX50570.1|1961798_1962674_+	copper resistance D family protein	NA	NA	NA	NA	NA
QAX50571.1|1962690_1963044_+	DUF2511 domain-containing protein	NA	NA	NA	NA	NA
QAX50572.1|1963101_1963221_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50573.1|1963426_1964506_-|integrase	integrase	integrase	A0A2H4IYC8	uncultured_Caudovirales_phage	52.0	6.3e-99
QAX53133.1|1964502_1965450_-	exodeoxyribonuclease 8	NA	Q9QF34	Lambdoid_phage	65.0	1.2e-53
QAX50574.1|1965639_1965870_+	glycoside hydrolase family 19 protein	NA	Q8HA86	Salmonella_phage	93.7	6.1e-28
1966226:1966241	attL	GGGAATTAACTCTTTT	NA	NA	NA	NA
QAX50575.1|1966314_1967850_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	40.7	8.6e-102
QAX50576.1|1967866_1968622_+	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	44.3	2.8e-45
QAX50577.1|1969358_1969526_-	lytic enzyme	NA	NA	NA	NA	NA
QAX50578.1|1969590_1969779_-	hypothetical protein	NA	NA	NA	NA	NA
QAX50579.1|1971228_1971429_-	phage virulence factor	NA	NA	NA	NA	NA
QAX50580.1|1971619_1971736_-|tail	phage tail protein	tail	NA	NA	NA	NA
QAX50581.1|1971998_1972124_+	arsenic transporter	NA	NA	NA	NA	NA
QAX50582.1|1972252_1972519_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50583.1|1973271_1973886_-	disulfide bond formation protein B	NA	NA	NA	NA	NA
QAX50584.1|1973895_1974054_-	hypothetical protein	NA	NA	NA	NA	NA
QAX50585.1|1974186_1975101_-	protein PagO	NA	NA	NA	NA	NA
QAX53134.1|1975718_1975919_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50586.1|1976386_1976755_-|integrase	integrase	integrase	K7PHK0	Enterobacteria_phage	39.8	7.0e-18
QAX50587.1|1978218_1978359_-	hypothetical protein	NA	NA	NA	NA	NA
QAX50588.1|1978524_1978794_-	hypothetical protein	NA	Q6UAV5	Klebsiella_phage	44.4	4.5e-06
QAX50589.1|1978840_1979035_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50590.1|1979164_1979584_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
QAX50591.1|1979956_1980433_-	hypothetical protein	NA	NA	NA	NA	NA
QAX50592.1|1980762_1981158_-	DUF1398 domain-containing protein	NA	C6ZCX4	Enterobacteria_phage	32.8	9.2e-16
QAX50593.1|1981841_1982564_+	SPI-1 type III secretion system guanine nucleotide exchange factor SopE2	NA	NA	NA	NA	NA
QAX50594.1|1982848_1983013_+	hypothetical protein	NA	NA	NA	NA	NA
QAX50595.1|1983236_1983887_+	serine/threonine-protein phosphatase 1	NA	A0A222YWF0	Escherichia_phage	51.4	1.1e-58
QAX50596.1|1983905_1984097_-	DUF1482 family protein	NA	NA	NA	NA	NA
QAX50597.1|1984207_1984447_-	DUF1480 family protein	NA	NA	NA	NA	NA
QAX53135.1|1984561_1986001_-	16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF	NA	NA	NA	NA	NA
QAX50598.1|1986078_1988718_-	PqiB family protein	NA	NA	NA	NA	NA
QAX50599.1|1988680_1989964_-	paraquat-inducible protein A	NA	NA	NA	NA	NA
QAX50600.1|1990005_1990590_+	GAF domain-containing protein	NA	NA	NA	NA	NA
QAX50601.1|1990687_1991374_+	RNA chaperone ProQ	NA	NA	NA	NA	NA
QAX50602.1|1991393_1993442_+|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	33.5	8.0e-87
1995497:1995512	attR	AAAAGAGTTAATTCCC	NA	NA	NA	NA
>prophage 5
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	2798833	2877067	4696653	integrase,tRNA,transposase,protease	Bacillus_phage(16.0%)	61	2819810:2819826	2871634:2871650
QAX51387.1|2798833_2800234_+|tRNA	asparagine--tRNA ligase	tRNA	A0A167RLM0	Powai_lake_megavirus	34.9	1.7e-80
QAX51388.1|2800840_2801932_+	porin OmpF	NA	Q1MVN1	Enterobacteria_phage	51.7	1.7e-99
QAX51389.1|2802116_2803307_+	aspartate aminotransferase	NA	NA	NA	NA	NA
QAX51390.1|2803368_2804016_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
QAX51391.1|2804043_2804592_-	DUF882 domain-containing protein	NA	A0A0K1LKR7	Rhodobacter_phage	33.7	1.2e-05
QAX51392.1|2804851_2806699_-	L,D-transpeptidase	NA	NA	NA	NA	NA
QAX51393.1|2807043_2811510_-	chromosome partition protein MukB	NA	NA	NA	NA	NA
QAX51394.1|2811509_2812214_-	chromosome partition protein MukE	NA	NA	NA	NA	NA
QAX51395.1|2812194_2813517_-	chromosome partition protein MukF	NA	NA	NA	NA	NA
QAX51396.1|2813509_2814313_-|tRNA	tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM	tRNA	NA	NA	NA	NA
QAX51397.1|2814448_2815225_+	envelope biogenesis factor ElyC	NA	NA	NA	NA	NA
QAX51398.1|2815204_2816098_-	hypothetical protein	NA	NA	NA	NA	NA
QAX51399.1|2816308_2817055_-	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
QAX51400.1|2817051_2817234_-	protein YcaR	NA	NA	NA	NA	NA
QAX51401.1|2817285_2818518_-	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAX51402.1|2818561_2819539_-	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
QAX51403.1|2819535_2821284_-	lipid A export ATP-binding/permease MsbA	NA	W8CYL7	Bacillus_phage	30.5	3.2e-60
2819810:2819826	attL	GCGATCGCGATACGCTG	NA	NA	NA	NA
QAX51404.1|2821320_2823585_-	ComEC family protein	NA	Q332C0	Clostridium_botulinum_C_phage	22.5	8.8e-10
QAX51405.1|2823761_2825017_-|transposase	IS3-like element ISSen1 family transposase	transposase	Q6H9S3	Enterobacteria_phage	34.5	4.8e-18
QAX51406.1|2825129_2825414_-	integration host factor subunit beta	NA	A7KV42	Bacillus_phage	40.2	4.1e-10
QAX51407.1|2825569_2827243_-	30S ribosomal protein S1	NA	NA	NA	NA	NA
QAX51408.1|2827356_2828040_-	cytidylate kinase	NA	NA	NA	NA	NA
QAX51409.1|2828212_2828974_-|protease	metalloprotease	protease	NA	NA	NA	NA
QAX51410.1|2829116_2830400_-	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
QAX51411.1|2830465_2831554_-	3-phosphoserine/phosphohydroxythreonine aminotransferase	NA	M1Q1P2	Streptococcus_phage	46.5	2.8e-78
QAX51412.1|2831739_2832432_-	DUF421 domain-containing protein	NA	NA	NA	NA	NA
QAX53174.1|2832568_2834329_+	30S ribosomal protein S12 methylthiotransferase accessory protein YcaO	NA	NA	NA	NA	NA
QAX51413.1|2834733_2835591_+	formate transporter FocA	NA	NA	NA	NA	NA
QAX51414.1|2835650_2837933_+	formate C-acetyltransferase	NA	A0A2P0VNR5	Tetraselmis_virus	42.0	1.1e-161
QAX51415.1|2838008_2838968_-	SPI-2 type III secretion system effector SopD2	NA	NA	NA	NA	NA
QAX51416.1|2839098_2839425_+	cytoplasmic protein	NA	NA	NA	NA	NA
QAX51417.1|2839516_2840341_+	pyruvate formate lyase 1-activating protein	NA	A0A2P0VNQ0	Tetraselmis_virus	26.5	2.8e-22
QAX51418.1|2840632_2842054_-	amino acid permease	NA	NA	NA	NA	NA
QAX51419.1|2842271_2843420_-	MFS transporter	NA	NA	NA	NA	NA
QAX51420.1|2843769_2844633_-	dimethyl sulfoxide reductase anchor subunit	NA	NA	NA	NA	NA
QAX51421.1|2844634_2845252_-	dimethylsulfoxide reductase subunit B	NA	A0A077SL61	Escherichia_phage	59.6	4.3e-76
QAX51422.1|2845262_2847707_-	dimethylsulfoxide reductase subunit A	NA	A0A077SK27	Escherichia_phage	50.5	7.0e-223
QAX51423.1|2847943_2849236_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	44.5	8.6e-95
QAX51424.1|2849494_2850838_-	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	40.9	1.6e-80
QAX51425.1|2850847_2851459_-	outer membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
QAX53175.1|2851601_2855606_-	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	49.5	2.9e-88
QAX51426.1|2855740_2856235_-	leucine-responsive regulatory protein	NA	NA	NA	NA	NA
QAX51427.1|2856780_2857749_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	45.8	2.9e-63
QAX51428.1|2857862_2859629_+	cysteine/glutathione ABC transporter permease/ATP-binding protein CydD	NA	W8CYL7	Bacillus_phage	25.3	1.6e-22
QAX51429.1|2859629_2861351_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	W8CYL7	Bacillus_phage	23.5	2.2e-13
QAX51430.1|2861395_2862100_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
QAX51431.1|2862100_2862484_+	hypothetical protein	NA	NA	NA	NA	NA
QAX51432.1|2862411_2862630_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
QAX51433.1|2862720_2863632_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAX51434.1|2863740_2864601_+	pirin family protein	NA	NA	NA	NA	NA
QAX51435.1|2864620_2865298_+	hydrolase	NA	NA	NA	NA	NA
QAX51436.1|2866123_2866879_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	44.3	2.8e-45
QAX51437.1|2866895_2868431_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	40.7	8.6e-102
QAX51438.1|2869754_2870075_+|integrase	integrase	integrase	NA	NA	NA	NA
QAX51439.1|2870293_2870491_+	hypothetical protein	NA	NA	NA	NA	NA
QAX51440.1|2870703_2872980_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.3	6.2e-165
2871634:2871650	attR	CAGCGTATCGCGATCGC	NA	NA	NA	NA
QAX51441.1|2873010_2873331_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	4.5e-13
QAX51442.1|2873654_2873876_+	cold shock-like protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.2	9.3e-18
QAX51443.1|2873830_2874025_-	hypothetical protein	NA	NA	NA	NA	NA
QAX51444.1|2874005_2875952_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	42.3	9.1e-40
QAX51445.1|2875948_2877067_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	38.9	1.4e-08
>prophage 6
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	2910481	2944419	4696653	tail,capsid,head,lysis,plate,portal,integrase	Salmonella_phage(92.31%)	42	2910391:2910410	2944494:2944513
2910391:2910410	attL	GTGGGTTTTTTGTTGCCTGA	NA	NA	NA	NA
QAX51479.1|2910481_2910700_-	transcriptional regulator	NA	Q53ZE7	Salmonella_virus	69.0	7.5e-20
QAX51480.1|2911895_2912381_-|tail	phage tail protein	tail	E5G6Q2	Salmonella_phage	99.2	8.3e-67
QAX51481.1|2912377_2915185_-|tail	phage tail tape measure protein	tail	E5G6Q1	Salmonella_phage	98.9	0.0e+00
QAX51482.1|2915177_2915297_-|tail	GpE family phage tail protein	tail	E5G6Q0	Salmonella_phage	100.0	1.8e-15
QAX51483.1|2915311_2915614_-|tail	phage tail assembly protein	tail	A0A1S6KZZ9	Salmonella_phage	100.0	2.5e-45
QAX51484.1|2915668_2916184_-|tail	phage major tail tube protein	tail	A0A1S6L002	Salmonella_phage	98.2	3.0e-91
QAX51485.1|2916193_2917366_-|tail	phage tail sheath protein	tail	A0A1S6KZY7	Salmonella_phage	99.7	5.7e-223
QAX51486.1|2917468_2918026_-	recombinase family protein	NA	A0A1S6L009	Salmonella_phage	98.4	7.2e-99
QAX51487.1|2918055_2919045_+|tail	phage tail protein	tail	A0A1S6KZZ0	Salmonella_phage	95.7	4.3e-187
QAX51488.1|2919014_2919632_+|tail	tail fiber assembly protein	tail	A0A1S6KZY8	Salmonella_phage	99.0	4.8e-112
QAX51489.1|2919635_2920175_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	97.2	6.1e-95
QAX51490.1|2920177_2921833_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	98.9	0.0e+00
QAX51491.1|2921829_2922435_-|tail	phage tail protein I	tail	A0A1S6L000	Salmonella_phage	99.5	3.4e-118
QAX51492.1|2922427_2923336_-|plate	baseplate assembly protein	plate	E5G6N8	Salmonella_phage	100.0	5.4e-160
QAX51493.1|2923322_2923682_-|plate	baseplate assembly protein	plate	E5G6N7	Salmonella_phage	98.3	1.0e-58
QAX51494.1|2923678_2924257_-|plate	phage baseplate assembly protein V	plate	E5G6N6	Salmonella_phage	99.5	3.9e-108
QAX51495.1|2924325_2924772_-	phage virion morphogenesis protein	NA	A0A1S6L001	Salmonella_phage	89.7	3.2e-65
QAX51496.1|2924764_2925196_-|tail	phage tail protein	tail	A0A1S6KZY0	Salmonella_phage	92.3	1.9e-70
QAX51497.1|2925291_2925720_-|lysis	LysB family phage lysis regulatory protein	lysis	A0A1S6KZX8	Salmonella_phage	94.3	1.7e-63
QAX53178.1|2925716_2926193_-	lysozyme	NA	E5G6N1	Salmonella_phage	91.1	1.5e-81
QAX51498.1|2926212_2926428_-	hypothetical protein	NA	E5G6N0	Salmonella_phage	80.3	1.8e-26
QAX51499.1|2926431_2926635_-|tail	phage tail protein	tail	E5G6M9	Salmonella_phage	91.0	3.0e-31
QAX51500.1|2926634_2927099_-|head	head completion/stabilization protein	head	A0A1S6KZW8	Salmonella_phage	89.0	4.2e-76
QAX51501.1|2927194_2927845_-	hypothetical protein	NA	E5G6M7	Salmonella_phage	95.4	7.3e-111
QAX51502.1|2927848_2928907_-|capsid	phage major capsid protein, P2 family	capsid	E5G6M6	Salmonella_phage	93.1	8.4e-181
QAX51503.1|2928923_2929757_-|capsid	capsid protein	capsid	A0A1S6KZW9	Salmonella_phage	91.0	2.4e-122
QAX51504.1|2929899_2931666_+	oxidoreductase	NA	A0A1S6KZW3	Salmonella_phage	99.3	0.0e+00
QAX51505.1|2931665_2932697_+|portal	phage portal protein	portal	A0A1S6KZW5	Salmonella_phage	87.3	4.2e-169
QAX51506.1|2932746_2934504_-	RNA-directed DNA polymerase	NA	NA	NA	NA	NA
QAX51507.1|2935065_2936367_-	hypothetical protein	NA	NA	NA	NA	NA
QAX51508.1|2936867_2937056_-	hypothetical protein	NA	E5G6M0	Salmonella_phage	96.8	1.6e-26
QAX51509.1|2937238_2939623_-	replication endonuclease	NA	E5G6L9	Salmonella_phage	97.6	0.0e+00
QAX51510.1|2939619_2940477_-	DNA adenine methylase	NA	E5G6L8	Salmonella_phage	96.1	1.5e-159
QAX51511.1|2940473_2940701_-	TraR/DksA family transcriptional regulator	NA	E5G6L7	Salmonella_phage	98.7	3.5e-36
QAX51512.1|2940700_2940934_-	DUF2732 family protein	NA	E5G6L6	Salmonella_phage	98.7	6.4e-33
QAX51513.1|2941001_2941343_-	hypothetical protein	NA	E5G6L5	Salmonella_phage	97.3	5.1e-55
QAX51514.1|2941306_2941507_-	DUF2724 domain-containing protein	NA	E5G6L4	Salmonella_phage	98.5	7.1e-33
QAX51515.1|2941514_2942024_-	phage regulatory CII family protein	NA	E5G6L3	Salmonella_phage	98.2	1.3e-86
QAX51516.1|2942056_2942278_-	regulator	NA	NA	NA	NA	NA
QAX51517.1|2942403_2942973_+	phage repressor protein CI	NA	A0A1S6KZZ7	Salmonella_phage	43.4	2.5e-38
QAX51518.1|2942988_2943180_+	hypothetical protein	NA	A0A0R6PIH8	Moraxella_phage	70.5	2.4e-09
QAX51519.1|2943366_2944419_+|integrase	integrase	integrase	A0A218M4I3	Erwinia_phage	55.8	2.2e-104
2944494:2944513	attR	GTGGGTTTTTTGTTGCCTGA	NA	NA	NA	NA
>prophage 7
CP033348	Salmonella enterica subsp. enterica strain CFSA1096 chromosome, complete genome	4696653	4442130	4480567	4696653	transposase,tail,holin,head,capsid,lysis,plate,portal,integrase,terminase	Escherichia_phage(38.64%)	48	4441973:4442019	4475942:4475988
4441973:4442019	attL	GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTGTC	NA	NA	NA	NA
QAX52828.1|4442130_4442385_-	DNA-binding transcriptional regulator	NA	M1SNR2	Escherichia_phage	100.0	1.3e-44
QAX52829.1|4442430_4443594_-	phage late control D family protein	NA	U5N3V4	Enterobacteria_phage	99.2	7.0e-205
QAX52830.1|4443593_4444073_-|tail	phage tail protein	tail	O64315	Escherichia_phage	99.4	1.5e-84
QAX52831.1|4444087_4446535_-|tail	phage tail tape measure protein	tail	M1T2S3	Escherichia_phage	97.1	0.0e+00
QAX52832.1|4446527_4446647_-|tail	GpE family phage tail protein	tail	A0A0F7LCR6	Escherichia_phage	100.0	1.0e-15
QAX52833.1|4446679_4446955_-|tail	phage tail assembly protein	tail	A0A0F7LDQ8	Escherichia_phage	98.9	2.2e-40
QAX52834.1|4447011_4447530_-|tail	phage major tail tube protein	tail	A0A0F7LDZ1	Escherichia_phage	100.0	1.4e-93
QAX52835.1|4447542_4448733_-|tail	phage tail sheath protein	tail	A0A0F7LBW9	Escherichia_phage	99.5	4.8e-225
QAX52836.1|4448792_4449386_-	recombinase family protein	NA	A0A0F7LA37	Escherichia_phage	97.0	1.3e-103
QAX53235.1|4449605_4450094_+|tail	phage tail protein	tail	A0A1S6KZZ0	Salmonella_phage	82.6	2.1e-70
QAX52837.1|4450063_4450681_+|tail	tail assembly chaperone	tail	A0A1S6KZY8	Salmonella_phage	83.6	5.3e-95
QAX52838.1|4450685_4451219_-|tail	tail fiber assembly protein	tail	A0A1S6KZZ1	Salmonella_phage	80.3	5.7e-77
QAX52839.1|4451221_4452784_-|tail	phage tail protein	tail	A0A1S6KZZ8	Salmonella_phage	49.4	1.5e-154
QAX52840.1|4452780_4453392_-|tail	phage tail protein I	tail	A0A0F7LA36	Escherichia_phage	99.5	6.4e-117
QAX52841.1|4453384_4454293_-|plate	baseplate assembly protein	plate	Q858V6	Yersinia_virus	100.0	8.8e-163
QAX52842.1|4454297_4454645_-|plate	baseplate assembly protein	plate	A0A0F7L9X3	Escherichia_phage	100.0	1.7e-58
QAX52843.1|4454641_4455277_-|plate	phage baseplate assembly protein V	plate	U5N3F0	Enterobacteria_phage	99.1	9.0e-114
QAX52844.1|4455343_4455796_-	phage virion morphogenesis protein	NA	A0A0F7LBV9	Escherichia_phage	100.0	6.3e-77
QAX52845.1|4455788_4456256_-|tail	phage tail protein	tail	A0A0F7LA33	Escherichia_phage	98.7	8.7e-82
QAX52846.1|4456218_4456392_-|lysis	phage lysis protein	lysis	Q7Y4E1	Escherichia_virus	96.5	2.3e-24
QAX52847.1|4456363_4456789_-|lysis	LysB family phage lysis regulatory protein	lysis	U5N3W5	Enterobacteria_phage	96.5	4.7e-66
QAX52848.1|4456776_4457202_-	protein lysA	NA	U5N096	Enterobacteria_phage	95.7	2.8e-58
QAX52849.1|4457216_4457714_-	lysozyme	NA	A0A0F7LBS0	Escherichia_phage	100.0	3.1e-93
QAX52850.1|4457713_4457995_-|holin	holin	holin	A0A0F7LDF8	Escherichia_phage	100.0	3.7e-43
QAX52851.1|4457998_4458202_-|tail	phage tail protein	tail	U5N3E7	Enterobacteria_phage	100.0	4.0e-31
QAX52852.1|4458201_4458711_-|head	head completion/stabilization protein	head	U5N0S3	Enterobacteria_phage	100.0	1.1e-90
QAX52853.1|4458810_4459554_-|terminase	terminase	terminase	U5N091	Enterobacteria_phage	97.2	3.3e-123
QAX52854.1|4459557_4460631_-|capsid	phage major capsid protein, P2 family	capsid	Q94MD1	Enterobacteria_phage	100.0	5.1e-202
QAX52855.1|4460689_4461544_-|capsid	capsid scaffolding protein	capsid	Q94MI4	Enterobacteria_phage	96.5	9.0e-133
QAX52856.1|4462803_4463559_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	44.3	2.8e-45
QAX52857.1|4463575_4465111_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	40.7	8.6e-102
QAX52858.1|4466135_4467170_+|portal	phage portal protein	portal	A0A0F7LDI7	Escherichia_phage	99.7	1.2e-200
QAX52859.1|4467600_4469808_+	hypothetical protein	NA	NA	NA	NA	NA
QAX52860.1|4470038_4472327_-	replication endonuclease	NA	Q858T4	Yersinia_virus	97.0	0.0e+00
QAX52861.1|4472316_4472592_-	hypothetical protein	NA	U5N3W1	Enterobacteria_phage	97.8	1.6e-43
QAX52862.1|4472588_4472813_-	TraR/DksA family transcriptional regulator	NA	A0A0F7LDG9	Escherichia_phage	97.3	8.5e-35
QAX52863.1|4472812_4473115_-	hypothetical protein	NA	U5N0U2	Enterobacteria_phage	97.0	2.5e-45
QAX52864.1|4473114_4473339_-	DUF2732 family protein	NA	S4TP68	Salmonella_phage	98.6	2.3e-32
QAX52865.1|4473402_4473903_-	replication protein B	NA	A0A0F7LBQ6	Escherichia_phage	100.0	4.5e-92
QAX52866.1|4474072_4474345_-	hypothetical protein	NA	Q1JS36	Enterobacteria_phage	100.0	1.4e-47
QAX52867.1|4474481_4474775_+	helix-turn-helix domain-containing protein	NA	Q1JS37	Enterobacteria_phage	100.0	2.7e-49
QAX52868.1|4474844_4475825_+|integrase	integrase	integrase	S4TP66	Salmonella_phage	100.0	4.7e-186
QAX52869.1|4476010_4476511_-	cell-envelope stress modulator CpxP	NA	NA	NA	NA	NA
4475942:4475988	attR	GATAAAAAAAACCCCCACATCATGTGGGGGAAGACAGGGATGGTGTC	NA	NA	NA	NA
QAX52870.1|4476661_4477360_+	envelope stress response regulator transcription factor CpxR	NA	Q6XM27	Feldmannia_irregularis_virus	30.3	5.3e-06
QAX52871.1|4477356_4478730_+	envelope stress sensor histidine kinase CpxA	NA	W8CYF6	Bacillus_phage	25.6	7.2e-15
QAX52872.1|4478780_4479176_-	nuclear transport factor 2 family protein	NA	NA	NA	NA	NA
QAX52873.1|4479187_4479940_-	6-N-hydroxylaminopurine resistance protein	NA	NA	NA	NA	NA
QAX52874.1|4479946_4480567_-	superoxide dismutase [Mn]	NA	Q56AR7	Bacillus_thuringiensis_phage	58.9	2.4e-63
>prophage 1
CP033347	Salmonella enterica subsp. enterica strain CFSA1096 plasmid pCFSA1096, complete sequence	297355	108602	196024	297355	transposase,integrase	Escherichia_phage(17.86%)	88	121665:121724	189098:189946
QAX48593.1|108602_109775_+|transposase	IS21 family transposase	transposase	U5N3F9	Enterobacteria_phage	99.2	5.4e-229
QAX48594.1|109771_110572_+	AAA family ATPase	NA	U5N3V8	Enterobacteria_phage	100.0	6.6e-146
QAX48595.1|110610_110976_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48596.1|111318_111711_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48597.1|111689_112001_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48775.1|112314_112608_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAX48598.1|112612_113938_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
QAX48599.1|113998_114205_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48600.1|114306_114717_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48601.1|114729_115545_+	HNH endonuclease	NA	G0X580	Salmonella_phage	36.5	1.1e-15
QAX48602.1|115798_116224_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48603.1|116772_117081_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48604.1|117096_117954_+	HNH endonuclease	NA	G0X580	Salmonella_phage	34.2	3.9e-11
QAX48605.1|118015_118219_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48606.1|118305_118485_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48607.1|118907_119612_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX48608.1|119905_120721_-	aminoglycoside O-phosphotransferase APH(3')-Ia	NA	A0A193DTG4	Autographa_californica_nuclear_polyhedrosis_virus	98.2	4.8e-160
QAX48609.1|120896_121601_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
121665:121724	attL	CCGTTCAGCACCCGCGTGGTGAATGTCGGCGTCCGCGATTCCACCTATGTGCTCGACGGC	NA	NA	NA	NA
QAX48610.1|122641_123151_+	peptidase M14	NA	NA	NA	NA	NA
QAX48611.1|123256_125158_+	ATP-dependent endonuclease	NA	NA	NA	NA	NA
QAX48612.1|125288_125483_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48613.1|125544_125724_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48614.1|127414_127756_+	RamA family antibiotic efflux transcriptional regulator	NA	D0R0F8	Streptococcus_phage	29.8	2.0e-06
QAX48615.1|128513_128702_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48616.1|128789_130226_+	glutathione synthase	NA	NA	NA	NA	NA
QAX48617.1|130643_131648_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
QAX48618.1|131914_132619_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX48619.1|132509_133469_-|integrase	class 1 integron integrase IntI1	integrase	A0A1P8DJJ6	Virus_Rctr41k	40.5	1.7e-47
QAX48776.1|133617_134409_+	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA22	NA	NA	NA	NA	NA
QAX48620.1|134540_135362_+	lincosamide nucleotidyltransferase Lnu(F)	NA	NA	NA	NA	NA
QAX48621.1|135514_136219_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX48777.1|136291_136531_+	macrolide transporter	NA	A0A2K5B2B5	Erysipelothrix_phage	46.2	9.5e-08
QAX48622.1|136676_137540_+	SDR family NAD(P)-dependent oxidoreductase	NA	W8CYX9	Bacillus_phage	31.0	2.5e-05
QAX48623.1|137577_137823_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48624.1|138291_139083_+	sulfonamide-resistant dihydropteroate synthase Sul3	NA	A0A0B5J4J5	Pandoravirus	26.5	1.2e-14
QAX48625.1|140045_140711_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48626.1|140768_141149_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48627.1|141898_142741_+|transposase	transposase	transposase	NA	NA	NA	NA
QAX48628.1|142727_144851_+|transposase	transposase	transposase	NA	NA	NA	NA
QAX48629.1|144850_146299_+	ATP-binding protein	NA	NA	NA	NA	NA
QAX48630.1|146339_147896_+|transposase	transposase	transposase	NA	NA	NA	NA
QAX48631.1|147907_148834_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48632.1|149186_149486_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAX48633.1|150049_151876_+	OLD family endonuclease	NA	E5E3R2	Burkholderia_phage	22.8	4.7e-14
QAX48634.1|152044_152395_-	DUF305 domain-containing protein	NA	A0A218MND9	uncultured_virus	50.5	1.8e-18
QAX48635.1|152542_152974_-	silver-binding protein SilE	NA	NA	NA	NA	NA
QAX48636.1|153218_154700_-	Cu(+)/Ag(+) sensor histidine kinase	NA	W8CYF6	Bacillus_phage	30.1	1.8e-27
QAX48637.1|154692_155373_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.0	2.7e-31
QAX48638.1|155562_156948_+	efflux transporter outer membrane subunit	NA	NA	NA	NA	NA
QAX48639.1|156975_157329_+	copper ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAX48640.1|157442_158735_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
QAX48641.1|158745_161892_+	CusA/CzcA family heavy metal efflux RND transporter	NA	S5VTK5	Leptospira_phage	22.4	2.1e-62
QAX48642.1|161978_162419_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48643.1|162546_164994_+	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	35.4	2.9e-83
QAX48644.1|165034_165232_+	DUF2933 domain-containing protein	NA	NA	NA	NA	NA
QAX48645.1|165265_166003_-	peptidase	NA	A0A2H4JAF5	uncultured_Caudovirales_phage	31.9	1.3e-10
QAX48646.1|166291_166741_-	copper resistance protein	NA	NA	NA	NA	NA
QAX48647.1|166975_168793_+	multicopper oxidase PcoA	NA	NA	NA	NA	NA
QAX48648.1|168792_169689_+	copper resistance protein B	NA	NA	NA	NA	NA
QAX48649.1|170103_170859_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	44.3	2.8e-45
QAX48650.1|170875_172411_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	40.7	8.6e-102
QAX48651.1|173192_173531_+	copper resistance protein CopC	NA	NA	NA	NA	NA
QAX48652.1|173535_174465_+	copper resistance protein D	NA	NA	NA	NA	NA
QAX48653.1|174519_175200_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	34.4	8.7e-30
QAX48654.1|175196_176597_+	sensor histidine kinase	NA	W8CYF6	Bacillus_phage	26.6	3.2e-18
QAX48655.1|176814_177249_+	copper-binding protein	NA	NA	NA	NA	NA
QAX48656.1|177628_178447_+	DUF4942 domain-containing protein	NA	NA	NA	NA	NA
QAX48657.1|178443_179649_+	ATP/GTP-binding protein	NA	NA	NA	NA	NA
QAX48658.1|179712_179916_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48659.1|179928_181248_-	DUF1173 family protein	NA	NA	NA	NA	NA
QAX48660.1|181498_182926_-	DNA cytosine methyltransferase	NA	E5E3X6	Burkholderia_phage	52.3	3.4e-100
QAX48661.1|183140_183656_+	thermonuclease family protein	NA	A0A1X6WF84	Pacmanvirus	38.6	2.1e-07
QAX48662.1|183658_184555_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48778.1|184776_185010_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48663.1|185055_185310_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48664.1|185347_185635_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48665.1|185671_185902_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48666.1|186238_186700_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48667.1|186729_187137_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48779.1|187187_187505_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48780.1|187881_188232_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48781.1|190096_190489_+	cysteine hydrolase	NA	NA	NA	NA	NA
189098:189946	attR	GCCGTCGAGCACATAGGTGGAATCGCGGACGCCGACATTCACCACGCGGGTGCTGAACGGCGCGTACTGGTCGGAGATATGGGTATAGAACAGCCGTCCCGGCTCGCTACCGTACTTCGGGTTGACGTGCCCGGTGCTCTCGCCCCGGCCACCCGCGCGGAAGCGCTGGCCATCGGAGGATGAGGTCGTGCCGTCGCCCCAGTGGGCGGCAAAGGCGTGGCGATACTGGTGGTTGACCAGCTCGGCCAAGGCCGCCGAATAGGTTTCGTCGCGGATGTGCCAGGCTTGCAGCCAGGACAGCTTGGCGTAGGTCAGGCCGGGGCTCGACTCGGCCATCTTGGTCAGCCCGAGGTTGATCGCATCACCGAGGATTGCGGACAGCAGCAACGTCCTGTCTTTGGCCTCGGCCCCGTCCTTCAAGTGGGTGAAGTGGCGGCTGAAGCCCGTCCAGTCGTCCACGTCCATCAGCAGTTCGGTGATCTTGATGCGCGGCAGTAACTGGCTGGTTTGGTCGATCAGCGCCTGCGCCCGATCCGGCACCGCCGCATCCAGCGGGGTGATTTTCAGCCCTGACTCGGTGAGGATGGCATCGGGCAGCTCGTTGTCCTTGGCCAGGCGGGTGACGGTGGCCAACTGCTCGTCCAGCAGCTGCAAACGCTCTTCCAGGTACTGGTCGCTGTTCGGGTTGATCGCCAGGGGCAGGGCCTGCTCGCGCTTGAGTGCGGCGAACTTCTCGGCCGGCAGCAGGTAGTCGTCGAAGTCGCGGAACTGCCGCGAGCCCTTGACCCAGATGTCGCCGGAGCGCAGGGCGTTCTTCAGCTCGGACAGGGCGCAGATTTCGTAGAATTT	NA	NA	NA	NA
QAX48668.1|190626_191511_+	EamA family transporter	NA	NA	NA	NA	NA
QAX48669.1|191542_192742_-	tetracycline efflux MFS transporter Tet(A)	NA	NA	NA	NA	NA
QAX48670.1|192820_193498_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
QAX48671.1|193529_193772_-	relaxase	NA	NA	NA	NA	NA
QAX48672.1|194077_194914_-	aminoglycoside O-phosphotransferase APH(6)-Id	NA	NA	NA	NA	NA
QAX48673.1|195319_196024_-|transposase	IS6 family transposase IS15DI	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
>prophage 2
CP033347	Salmonella enterica subsp. enterica strain CFSA1096 plasmid pCFSA1096, complete sequence	297355	199315	232888	297355	transposase	Escherichia_phage(41.67%)	27	NA	NA
QAX48676.1|199315_200809_-|transposase	IS91 family transposase	transposase	NA	NA	NA	NA
QAX48677.1|201019_201244_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48678.1|201735_202440_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX48679.1|202476_203604_-	DUF3883 domain-containing protein	NA	NA	NA	NA	NA
QAX48680.1|203654_203900_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48681.1|203905_204097_+	hypothetical protein	NA	NA	NA	NA	NA
QAX48682.1|208211_209069_-	class A beta-lactamase LAP-2	NA	Q1MVP3	Enterobacteria_phage	61.1	2.0e-92
QAX48782.1|209133_210864_-	cell division protein FtsI	NA	NA	NA	NA	NA
QAX48683.1|211272_212133_-	class A broad-spectrum beta-lactamase TEM-1	NA	Q1MVP3	Enterobacteria_phage	100.0	4.6e-161
QAX48684.1|212315_212873_-	recombinase family protein	NA	Q1MVP4	Enterobacteria_phage	100.0	7.0e-94
QAX48685.1|213436_214699_+|transposase	IS1380 family transposase ISEc9	transposase	A0A1B0VDR3	Salmonella_phage	100.0	1.3e-39
QAX48686.1|214954_215830_+	class A extended-spectrum beta-lactamase CTX-M-55	NA	A0A1B0VBP7	Salmonella_phage	82.1	2.4e-125
QAX48687.1|215876_216209_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
QAX48688.1|220470_221127_+	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA	NA
QAX48689.1|221906_223298_-|transposase	ISKra4-like element ISKpn19 family transposase	transposase	NA	NA	NA	NA
QAX48690.1|223334_223907_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	39.4	3.4e-19
QAX48691.1|224043_224634_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
QAX48692.1|224740_225445_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX48783.1|225415_225775_+	DDE domain-containing protein	NA	A0A077SL39	Escherichia_phage	64.6	1.7e-13
QAX48693.1|225965_226322_-	hypothetical protein	NA	NA	NA	NA	NA
QAX48694.1|226267_226852_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAX48695.1|226851_228090_-	MFS transporter	NA	NA	NA	NA	NA
QAX48696.1|228086_228992_-	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
QAX48697.1|229113_229818_-|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX48698.1|230494_230947_-	NAD(+)--rifampin ADP-ribosyltransferase Arr-2	NA	NA	NA	NA	NA
QAX48784.1|231057_231531_-	trimethoprim-resistant dihydrofolate reductase DfrA14	NA	G3MBI7	Bacillus_virus	28.9	8.4e-16
QAX48699.1|232183_232888_-|transposase	IS6 family transposase IS15DI	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
