The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP026157	Klebsiella pneumoniae strain F93-2 chromosome, complete genome	5107051	1373829	1464183	5107051	portal,terminase,holin,integrase,transposase,tail,tRNA	Enterobacteria_phage(20.83%)	96	1396828:1396852	1441429:1441453
QAW99645.1|1373829_1375248_+|tRNA	glutamate--tRNA ligase	tRNA	NA	NA	NA	NA
QAW99646.1|1375299_1375692_-	hypothetical protein	NA	NA	NA	NA	NA
QAW99647.1|1375695_1376049_-	hypothetical protein	NA	NA	NA	NA	NA
QAW99648.1|1376670_1378842_+	sensor domain-containing phosphodiesterase	NA	NA	NA	NA	NA
QAW99649.1|1378890_1380093_-	NupC/NupG family nucleoside CNT transporter	NA	NA	NA	NA	NA
QAW99650.1|1380439_1381681_+	divalent metal cation transporter	NA	NA	NA	NA	NA
QAW99651.1|1381738_1382092_-	DUF2502 domain-containing protein	NA	NA	NA	NA	NA
QAW99652.1|1382222_1383215_-	L-glyceraldehyde 3-phosphate reductase	NA	NA	NA	NA	NA
QAX03032.1|1383395_1385057_+	indolepyruvate decarboxylase	NA	NA	NA	NA	NA
QAW99653.1|1385053_1386289_-	ion channel protein	NA	NA	NA	NA	NA
QAW99654.1|1386552_1387518_+	glucokinase	NA	NA	NA	NA	NA
QAX03033.1|1387571_1388309_-	DNA-binding response regulator	NA	A0A2R2ZGH8	Clostridioides_phage	26.3	1.5e-14
QAW99655.1|1388320_1390018_-	sensor histidine kinase	NA	Q9EYF3	Enterobacteria_phage	28.5	6.7e-47
QAW99656.1|1390126_1390312_-	phytanoyl-CoA dioxygenase	NA	NA	NA	NA	NA
QAW99657.1|1390400_1391615_+	alanine transaminase	NA	NA	NA	NA	NA
QAX03034.1|1391685_1391757_-	membrane protein YpdK	NA	NA	NA	NA	NA
QAW99658.1|1392095_1393292_-	cyanate transporter	NA	NA	NA	NA	NA
QAW99659.1|1393288_1393747_-	nucleoside deaminase	NA	A0A0B5J096	Pandoravirus	33.1	7.2e-12
QAW99660.1|1393879_1394788_+	transcriptional regulator CynR	NA	A0A2P0ZL89	Lactobacillus_phage	24.2	4.6e-10
QAW99661.1|1394797_1395679_-	hypothetical protein	NA	A0A2H4JEC4	uncultured_Caudovirales_phage	56.8	1.5e-05
QAW99662.1|1396045_1396528_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
1396828:1396852	attL	TTATATCCATTTAACTAAGGGGACA	NA	NA	NA	NA
QAW99663.1|1397046_1398216_+|integrase	integrase	integrase	A0A2R2Z2Y0	Escherichia_phage	86.1	1.9e-202
QAW99664.1|1398252_1399242_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99665.1|1399263_1399455_-	hypothetical protein	NA	A0A2R2Z2X2	Escherichia_phage	60.0	1.3e-12
QAX03035.1|1399465_1399900_-	DUF550 domain-containing protein	NA	A0A1V0E5L6	Salmonella_phage	47.7	3.6e-13
QAW99666.1|1400147_1400372_-	hypothetical protein	NA	S4TVX5	Salmonella_phage	52.3	1.4e-13
QAW99667.1|1400368_1400497_-|integrase	integrase	integrase	NA	NA	NA	NA
QAW99668.1|1400686_1401547_-	DNA-binding protein	NA	A0A2H4J902	uncultured_Caudovirales_phage	54.3	1.8e-72
QAW99669.1|1401628_1402441_-	hypothetical protein	NA	NA	NA	NA	NA
QAW99670.1|1402482_1402842_-	hypothetical protein	NA	NA	NA	NA	NA
QAW99671.1|1403288_1403801_+	hypothetical protein	NA	NA	NA	NA	NA
QAX03036.1|1403903_1404977_-	(p)ppGpp synthetase	NA	A0A1B0VBT5	Salmonella_phage	39.3	2.7e-54
QAW99672.1|1405690_1405927_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99673.1|1405948_1406722_-	hypothetical protein	NA	NA	NA	NA	NA
QAX03037.1|1406953_1407658_-	hypothetical protein	NA	G8C7U1	Escherichia_phage	59.2	3.2e-67
QAW99674.1|1407763_1408024_+	hypothetical protein	NA	A0A1B5FPK9	Escherichia_phage	40.6	1.6e-08
QAW99675.1|1408052_1408583_+	DNA-binding protein	NA	A0A1C9II13	Salmonella_phage	62.4	6.1e-55
QAW99676.1|1408625_1408904_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99677.1|1409066_1409342_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99678.1|1409334_1410864_+	helicase	NA	A0A286N2P9	Klebsiella_phage	66.5	5.6e-202
QAW99679.1|1410860_1411832_+	DNA primase	NA	A0A286N2Q0	Klebsiella_phage	60.7	1.7e-108
QAX03038.1|1411801_1412446_+	NinG family protein	NA	A0A1W6JNX3	Morganella_phage	54.3	1.9e-39
QAW99680.1|1412442_1413084_+	DNA methyltransferase	NA	I6PDF5	Cronobacter_phage	69.8	1.9e-82
QAW99681.1|1413080_1413659_+	hypothetical protein	NA	A0A0U2S606	Escherichia_phage	57.2	5.8e-51
QAW99682.1|1413745_1414030_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99683.1|1414164_1414509_+|holin	phage holin, lambda family	holin	Q8SBE1	Shigella_phage	66.1	4.5e-35
QAW99684.1|1414492_1414972_+	lysozyme	NA	A0A0M4R365	Salmonella_phage	71.1	1.4e-58
QAW99685.1|1415153_1415336_-	hypothetical protein	NA	NA	NA	NA	NA
QAW99686.1|1415586_1415811_+	hypothetical protein	NA	A0A2H4J182	uncultured_Caudovirales_phage	70.3	2.2e-22
QAW99687.1|1415875_1416121_+	DUF2560 domain-containing protein	NA	A0A286N2R1	Klebsiella_phage	96.3	3.0e-33
QAX03039.1|1416398_1416608_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99688.1|1416674_1416860_+	hypothetical protein	NA	Q8W634	Enterobacteria_phage	61.1	2.4e-11
QAW99689.1|1417181_1417673_+|terminase	terminase	terminase	K7PJY2	Enterobacterial_phage	82.8	7.1e-66
QAW99690.1|1417672_1419781_+	DNA packaging protein	NA	K7PH52	Enterobacterial_phage	83.3	0.0e+00
QAW99691.1|1419777_1419993_+	hypothetical protein	NA	A5LH28	Enterobacteria_phage	75.7	2.9e-24
QAW99692.1|1419989_1421489_+|portal	phage portal protein	portal	K7PHM5	Enterobacterial_phage	83.4	9.5e-247
QAW99693.1|1421433_1423449_+	peptidase S14	NA	K7PKX4	Enterobacterial_phage	81.8	0.0e+00
QAW99694.1|1423529_1423856_+	recombinase RecA	NA	K7PJY3	Enterobacterial_phage	66.4	2.3e-33
QAW99695.1|1423848_1424142_+	ATP-binding protein	NA	NA	NA	NA	NA
QAW99696.1|1424131_1424683_+|tail	phage tail protein	tail	K7P7A8	Enterobacteria_phage	67.9	5.3e-54
QAW99697.1|1424679_1425078_+|tail	phage tail protein	tail	K7PHM6	Enterobacterial_phage	57.0	1.2e-39
QAW99698.1|1425085_1425568_+|tail	phage tail protein	tail	M9NYX0	Enterobacteria_phage	69.2	2.6e-60
QAW99699.1|1425610_1426006_+|tail	phage tail protein	tail	M9NZD7	Enterobacteria_phage	28.2	1.1e-08
QAW99700.1|1426026_1426344_+|tail	phage tail assembly protein T	tail	A0A0K2FJB3	Enterobacteria_phage	51.5	1.4e-19
QAW99701.1|1426324_1429021_+|tail	phage tail tape measure protein	tail	K7PKR0	Enterobacteria_phage	63.0	2.0e-202
QAW99702.1|1429020_1429494_+	hypothetical protein	NA	A0A286S298	Klebsiella_phage	63.5	1.7e-53
QAW99703.1|1429480_1429963_+	DUF1833 domain-containing protein	NA	A0A286S2B1	Klebsiella_phage	68.4	6.5e-56
QAW99704.1|1429970_1430357_+	nitrite transporter	NA	A0A286S2A6	Klebsiella_phage	50.8	4.7e-33
QAW99705.1|1430353_1433422_+	kinase	NA	A0A286S259	Klebsiella_phage	66.5	0.0e+00
QAW99706.1|1435540_1436410_+	hypothetical protein	NA	A0A2H4N7C5	Pectobacterium_phage	26.6	2.1e-12
QAW99707.1|1437050_1437473_+	hypothetical protein	NA	K7P834	Enterobacteria_phage	45.3	4.7e-26
QAW99708.1|1437884_1438124_+	DNA polymerase V	NA	I6PD82	Cronobacter_phage	54.4	7.5e-21
QAW99709.1|1438126_1438450_+	hypothetical protein	NA	K7PGV5	Enterobacterial_phage	52.0	8.0e-26
QAW99710.1|1439684_1440796_-|transposase	IS3 family transposase	transposase	A0A0N9SIX5	Staphylococcus_phage	30.4	4.4e-07
QAW99711.1|1440891_1441182_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99712.1|1441541_1442471_-	hypothetical protein	NA	E7DYY8	Enterobacteria_phage	81.4	6.7e-134
1441429:1441453	attR	TTATATCCATTTAACTAAGGGGACA	NA	NA	NA	NA
QAW99713.1|1442760_1443522_+	phospholipid-binding lipoprotein MlaA	NA	NA	NA	NA	NA
QAW99714.1|1443583_1444912_-	long-chain fatty acid transporter FadL	NA	NA	NA	NA	NA
QAW99715.1|1445279_1445564_+	DUF406 domain-containing protein	NA	NA	NA	NA	NA
QAW99716.1|1445723_1447034_+	acetyl-CoA C-acyltransferase FadI	NA	NA	NA	NA	NA
QAW99717.1|1447033_1449178_+	fatty acid oxidation complex subunit alpha FadJ	NA	NA	NA	NA	NA
QAW99718.1|1449387_1449873_+	phosphohistidine phosphatase SixA	NA	NA	NA	NA	NA
QAW99719.1|1449893_1450445_-	endonuclease SmrB	NA	NA	NA	NA	NA
QAW99720.1|1450612_1451545_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
QAW99721.1|1451586_1452672_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	46.6	7.7e-89
QAW99722.1|1452674_1453499_+	penicillin-insensitive murein endopeptidase	NA	NA	NA	NA	NA
QAW99723.1|1453498_1454308_+	hypothetical protein	NA	NA	NA	NA	NA
QAW99724.1|1454307_1454856_+	elongation factor P hydroxylase	NA	NA	NA	NA	NA
QAX03040.1|1454887_1455169_+	YfcL family protein	NA	NA	NA	NA	NA
QAX03041.1|1455230_1457219_-|tRNA	bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC	tRNA	NA	NA	NA	NA
QAW99725.1|1457377_1458598_+	beta-ketoacyl-[acyl-carrier-protein] synthase I	NA	NA	NA	NA	NA
QAW99726.1|1458807_1459983_+	arabinose transporter	NA	NA	NA	NA	NA
QAW99727.1|1460069_1461047_-	flagella biosynthesis regulator Flk	NA	NA	NA	NA	NA
QAX03042.1|1461181_1462294_+	4-phosphoerythronate dehydrogenase PdxB	NA	A0A2R8FDS8	Brazilian_cedratvirus	27.9	2.1e-20
QAW99728.1|1462357_1463371_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
QAW99729.1|1463370_1464183_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
>prophage 2
CP026157	Klebsiella pneumoniae strain F93-2 chromosome, complete genome	5107051	1662960	1669866	5107051		Planktothrix_phage(33.33%)	6	NA	NA
QAX03049.1|1662960_1663824_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	27.5	5.7e-10
QAW99899.1|1663834_1664608_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.3	1.1e-25
QAX03050.1|1664849_1665743_-	lipid kinase YegS	NA	A0A1V0SBJ0	Catovirus	29.8	6.1e-15
QAW99900.1|1665988_1667350_-	U32 family peptidase	NA	Q6DW11	Phage_TP	94.8	1.8e-207
QAW99901.1|1667668_1668391_-	two-component system response regulator BaeR	NA	W8CYM9	Bacillus_phage	33.2	8.3e-31
QAW99902.1|1668387_1669866_-	two-component system sensor histidine kinase BaeA	NA	W8CYF6	Bacillus_phage	28.3	8.5e-30
>prophage 3
CP026157	Klebsiella pneumoniae strain F93-2 chromosome, complete genome	5107051	2652289	2661818	5107051		Escherichia_phage(85.71%)	8	NA	NA
QAX00811.1|2652289_2655397_+	beta-galactosidase	NA	L0N6M2	Herpes_simplex_virus	59.7	0.0e+00
QAX00812.1|2655451_2656717_+	MFS transporter	NA	NA	NA	NA	NA
QAX00813.1|2656747_2657836_-	chromosome segregation protein SMC	NA	A0A077SLJ9	Escherichia_phage	100.0	8.0e-211
QAX00814.1|2657922_2658183_-	hypothetical protein	NA	A0A077SK33	Escherichia_phage	98.8	5.4e-41
QAX00815.1|2658480_2659341_+	class A broad-spectrum beta-lactamase SHV-11	NA	A0A077SL40	Escherichia_phage	99.3	2.2e-155
QAX00816.1|2659361_2660123_-	DeoR/GlpR transcriptional regulator	NA	A0A077SK06	Escherichia_phage	100.0	1.9e-134
QAX00817.1|2660383_2661205_+	hypothetical protein	NA	A0A077SLF7	Escherichia_phage	99.5	2.0e-97
QAX00818.1|2661197_2661818_+	aldolase	NA	A0A077SK32	Escherichia_phage	100.0	8.0e-115
>prophage 4
CP026157	Klebsiella pneumoniae strain F93-2 chromosome, complete genome	5107051	3311943	3321417	5107051	tRNA,protease	Brazilian_cedratvirus(16.67%)	9	NA	NA
QAX01409.1|3311943_3313665_+	cysteine/glutathione ABC transporter ATP-binding protein/permease CydC	NA	A0A2R8FG22	Brazilian_cedratvirus	34.3	1.5e-14
QAX01410.1|3313709_3314411_+|tRNA	leucyl/phenylalanyl-tRNA--protein transferase	tRNA	NA	NA	NA	NA
QAX01411.1|3314764_3314983_+	translation initiation factor IF-1	NA	NA	NA	NA	NA
QAX01412.1|3315113_3317393_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.0	1.6e-165
QAX01413.1|3317423_3317741_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	45.7	2.0e-13
QAX01414.1|3318066_3318288_+	cold shock domain protein CspD	NA	A0A2H4N7Y6	Lake_Baikal_phage	61.2	1.3e-16
QAX01415.1|3318221_3318425_-	hypothetical protein	NA	NA	NA	NA	NA
QAX01416.1|3318364_3320305_-	macrolide ABC transporter ATP-binding protein/permease MacB	NA	G9BWD6	Planktothrix_phage	40.5	1.9e-37
QAX01417.1|3320301_3321417_-	macrolide transporter subunit MacA	NA	A0A140XAI1	Dickeya_phage	52.7	1.3e-06
>prophage 5
CP026157	Klebsiella pneumoniae strain F93-2 chromosome, complete genome	5107051	4015552	4023809	5107051	integrase	Enterobacteria_phage(50.0%)	11	NA	NA
QAX02040.1|4015552_4016806_+	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.1	6.8e-89
QAX02041.1|4017161_4018376_+	DUF4102 domain-containing protein	NA	Q7M297	Enterobacteria_phage	56.0	1.3e-132
QAX02042.1|4018444_4019041_+	hypothetical protein	NA	NA	NA	NA	NA
QAX02043.1|4019208_4019412_+	AlpA family transcriptional regulator	NA	E5E3Y1	Burkholderia_phage	45.3	2.6e-06
QAX02044.1|4019538_4019982_-	hypothetical protein	NA	NA	NA	NA	NA
QAX02045.1|4020039_4020219_-	hypothetical protein	NA	A0A2H4JB52	uncultured_Caudovirales_phage	56.9	2.6e-10
QAX02046.1|4020348_4020537_+	host cell division inhibitor Icd-like protein	NA	NA	NA	NA	NA
QAX02047.1|4020529_4021405_+|integrase	integrase	integrase	NA	NA	NA	NA
QAX02048.1|4021520_4021724_+	hypothetical protein	NA	K7PHG9	Enterobacteria_phage	56.5	3.4e-14
QAX02049.1|4021734_4022049_+	DUF4222 domain-containing protein	NA	NA	NA	NA	NA
QAX02050.1|4022045_4023809_+	DNA primase	NA	Q7M2A8	Enterobacteria_phage	43.8	2.5e-105
>prophage 1
CP026158	Klebsiella pneumoniae strain F93-2 plasmid pF93-2_1, complete sequence	95560	7650	43918	95560	transposase,integrase,holin,protease	Escherichia_phage(40.0%)	38	8394:8408	26410:26424
QAX03215.1|7650_8355_+|transposase	IS6 family transposase IS15DI	transposase	A0A077SL39	Escherichia_phage	99.6	1.2e-138
8394:8408	attL	TTTGCAACAGTGCCA	NA	NA	NA	NA
QAX03216.1|8543_9419_+	class A extended-spectrum beta-lactamase CTX-M-15	NA	A0A1B0VBP7	Salmonella_phage	82.4	1.1e-125
QAX03217.1|9465_9798_-	cupin fold metalloprotein, WbuC family	NA	NA	NA	NA	NA
QAX03218.1|9814_12607_+|transposase	Tn3 family transposase	transposase	Q1MVP5	Enterobacteria_phage	99.9	0.0e+00
QAX03219.1|14059_14716_+	quinolone resistance pentapeptide repeat protein QnrS1	NA	NA	NA	NA	NA
QAX03220.1|15495_16887_-|transposase	ISKra4 family transposase ISKpn19	transposase	NA	NA	NA	NA
QAX03221.1|16923_17496_-	recombinase family protein	NA	M9Q1K0	Clostridium_phage	39.4	3.4e-19
QAX03222.1|17632_18223_-	plasmid pRiA4b ORF-3 family protein	NA	NA	NA	NA	NA
QAX03223.1|18279_18474_-	addiction module toxin RelE	NA	A0A2H4JBF4	uncultured_Caudovirales_phage	66.7	1.1e-14
QAX03224.1|18473_18713_-	type II toxin-antitoxin system antitoxin, RelB/DinJ family	NA	A0A2H4JBG1	uncultured_Caudovirales_phage	54.4	2.0e-18
QAX03225.1|19087_21091_+|holin	high-affinity choline transporter BetT	holin	A0A2I7QNT1	Vibrio_phage	25.9	2.2e-20
QAX03226.1|21154_22432_+	DUF2254 domain-containing protein	NA	NA	NA	NA	NA
QAX03227.1|22786_22984_+	hypothetical protein	NA	NA	NA	NA	NA
QAX03228.1|23048_24479_+	hypothetical protein	NA	NA	NA	NA	NA
QAX03229.1|24619_25222_+|integrase	integrase	integrase	A3F636	Streptococcus_phage	30.5	3.6e-11
QAX03230.1|25318_26128_-	chaperonin	NA	A0A0F7L9X0	Escherichia_phage	94.8	2.1e-155
QAX03231.1|26473_27178_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
26410:26424	attR	TGGCACTGTTGCAAA	NA	NA	NA	NA
QAX03232.1|28371_28914_-	tunicamycin resistance protein	NA	NA	NA	NA	NA
QAX03233.1|28926_29787_-	aminoglycoside N-acetyltransferase AAC(3)-IIa	NA	NA	NA	NA	NA
QAX03234.1|29893_30598_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX03235.1|30719_31625_+	Mph(A) family macrolide 2'-phosphotransferase	NA	NA	NA	NA	NA
QAX03236.1|31621_32860_+	MFS transporter	NA	NA	NA	NA	NA
QAX03237.1|32859_33444_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
QAX03238.1|33389_33746_+	hypothetical protein	NA	NA	NA	NA	NA
QAX03239.1|33936_34701_-|transposase	IS6 family transposase IS6100	transposase	A0A077SL39	Escherichia_phage	65.7	4.3e-86
QAX03240.1|34729_34912_+	resolvase	NA	NA	NA	NA	NA
QAX03241.1|34927_35233_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
QAX03242.1|35243_36449_-	chromate transporter	NA	NA	NA	NA	NA
QAX03243.1|36604_36808_-	hypothetical protein	NA	NA	NA	NA	NA
QAX03244.1|36826_37006_+	hypothetical protein	NA	NA	NA	NA	NA
QAX03245.1|36935_37775_-	sulfonamide-resistant dihydropteroate synthase Sul1	NA	A0A0B5J4J5	Pandoravirus	27.2	5.0e-11
QAX03246.1|37768_38116_-	quaternary ammonium compound efflux SMR transporter QacE delta 1	NA	NA	NA	NA	NA
QAX03247.1|38321_39110_-	ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA5	NA	NA	NA	NA	NA
QAX03319.1|39240_39714_-	trimethoprim-resistant dihydrofolate reductase DfrA17	NA	A0A1B2IAU3	Erwinia_phage	34.6	1.3e-16
QAX03248.1|40565_41270_+|transposase	IS6 family transposase IS15DIV	transposase	A0A077SL39	Escherichia_phage	100.0	1.8e-139
QAX03249.1|42479_42584_-	hypothetical protein	NA	NA	NA	NA	NA
QAX03250.1|42580_43045_-	mRNA interferase PemK	NA	NA	NA	NA	NA
QAX03251.1|43264_43918_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
