The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	11982	39246	3523985	terminase,plate,tail,coat	Pseudomonas_phage(22.22%)	34	NA	NA
QAU22574.1|11982_12948_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
QAU22575.1|12944_15242_-	fimbrial biogenesis outer membrane usher protein	NA	NA	NA	NA	NA
QAU25327.1|15353_16046_-	molecular chaperone	NA	NA	NA	NA	NA
QAU22576.1|16087_16612_-|coat	spore coat U domain-containing protein	coat	NA	NA	NA	NA
QAU22577.1|17153_17360_+	type II toxin-antitoxin system RelB/DinJ family antitoxin	NA	NA	NA	NA	NA
QAU22578.1|17551_17941_+	type II toxin-antitoxin system death-on-curing family toxin	NA	A0A222YZ88	Escherichia_phage	39.0	8.8e-19
QAU22579.1|18175_18358_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22580.1|18372_18624_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22581.1|18680_19217_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22582.1|19314_19638_+	hypothetical protein	NA	K4HZA5	Acidithiobacillus_phage	49.3	9.5e-11
QAU22583.1|19661_19922_+	site-specific DNA-methyltransferase	NA	A0A2K9V2Z8	Faecalibacterium_phage	63.2	4.6e-24
QAU22584.1|20473_21865_+|terminase	terminase	terminase	A0A0D4DCE6	Acinetobacter_phage	60.1	2.3e-146
QAU22585.1|21922_23266_+	DUF4055 domain-containing protein	NA	A0A0H5AWC7	Pseudomonas_phage	44.2	1.2e-91
QAU22586.1|23326_24091_+	hypothetical protein	NA	A0A0H5AWD1	Pseudomonas_phage	59.0	2.5e-65
QAU22587.1|24242_25403_+|coat	P22 coat - protein 5 family protein	coat	W6EBZ8	Rhizobium_phage	48.8	1.5e-82
QAU22588.1|25454_25706_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22589.1|25712_26117_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22590.1|26343_26991_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22591.1|26990_27842_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22592.1|27849_28050_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22593.1|28115_29669_+|tail	phage tail protein	tail	B3GAJ6	uncultured_virus	46.5	1.1e-101
QAU22594.1|29747_30182_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22595.1|30181_30577_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22596.1|30761_31262_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22597.1|31258_31531_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22598.1|31753_32074_+	DUF2236 domain-containing protein	NA	NA	NA	NA	NA
QAU22599.1|31988_33710_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22600.1|33924_34176_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22601.1|34163_34631_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22602.1|34926_35886_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22603.1|35889_37011_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22604.1|37028_37613_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22605.1|37634_38036_+|tail	phage tail protein	tail	NA	NA	NA	NA
QAU22606.1|38112_39246_+|plate	baseplate protein	plate	B3GAJ9	uncultured_virus	44.4	3.3e-58
>prophage 2
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	322789	383106	3523985	capsid,holin,plate,tail,terminase,integrase,tRNA,portal	Escherichia_phage(17.65%)	70	322676:322722	362223:362269
322676:322722	attL	CTTGTAAGCGGTAGGTCGTCTGTTCGAGTCAGACTGTCGGCACCAGT	NA	NA	NA	NA
QAU22852.1|322789_323926_-|integrase	integrase	integrase	V9IQN0	Stenotrophomonas_phage	41.5	5.8e-79
QAU25343.1|323922_324117_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22853.1|324319_324472_-	DUF5131 family protein	NA	A0A0A8ILD3	Aurantimonas_phage	58.1	3.0e-07
QAU22854.1|324530_324815_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22855.1|324826_326548_-	DNA methyltransferase	NA	A0A1X9HVK8	Ruegeria_phage	32.2	6.8e-39
QAU22856.1|326768_327104_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22857.1|327317_328109_-	DUF2303 family protein	NA	K7ZMK3	Xanthomonas_citri_phage	40.1	1.2e-46
QAU22858.1|328123_328501_-	hypothetical protein	NA	A0A2D1GMS3	Marinobacter_phage	44.9	4.1e-21
QAU22859.1|328478_328709_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22860.1|328929_329136_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22861.1|329132_329429_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22862.1|329425_329710_-	hypothetical protein	NA	A0A240F4V4	Ochrobactrum_phage	63.5	1.6e-25
QAU22863.1|329823_330099_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22864.1|330407_331535_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22865.1|331662_332097_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22866.1|332067_333627_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22867.1|333660_334377_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22868.1|334469_334751_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22869.1|334854_335055_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22870.1|335274_336015_+	hypothetical protein	NA	A0A0U4IBP5	Pseudomonas_phage	55.9	9.8e-27
QAU22871.1|335729_337433_+	replicative DNA helicase	NA	A0A1B0VG30	Salmonella_phage	37.0	9.1e-60
QAU22872.1|337429_337642_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22873.1|337865_338168_+	hypothetical protein	NA	A0A2I7QMZ9	Vibrio_phage	52.0	9.5e-13
QAU22874.1|338167_338560_+	VRR-NUC domain-containing protein	NA	W6ARB7	Acinetobacter_phage	43.8	3.2e-21
QAU22875.1|338646_339084_+	hypothetical protein	NA	A0A088FQJ8	Escherichia_phage	35.3	8.1e-13
QAU22876.1|339123_339570_+	lysozyme	NA	A0A0M5M782	Salmonella_phage	57.7	1.6e-37
QAU22877.1|339485_339869_+|holin	holin	holin	A0A0M5M1H1	Salmonella_phage	45.3	1.0e-11
QAU22878.1|339865_340228_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22879.1|340203_340485_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22880.1|340488_341013_+|terminase	terminase small subunit	terminase	A0A193GYK5	Enterobacter_phage	56.4	2.4e-43
QAU22881.1|340990_342976_+|terminase	phage terminase large subunit family protein	terminase	A0A088FQV3	Escherichia_phage	62.2	1.4e-250
QAU25344.1|343608_345162_+|portal	phage portal protein	portal	A0A088FVG5	Escherichia_phage	53.0	1.1e-136
QAU25345.1|345151_347161_+|capsid	phage major capsid protein	capsid	V5YSS9	Pseudomonas_phage	52.6	1.9e-178
QAU22882.1|347170_347431_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22883.1|347427_347769_+	hypothetical protein	NA	NA	NA	NA	NA
QAU25346.1|347795_348314_+	hypothetical protein	NA	A0A193GYC6	Enterobacter_phage	35.1	1.3e-14
QAU22884.1|348289_348841_+	hypothetical protein	NA	V5YST2	Pseudomonas_phage	39.5	1.9e-35
QAU22885.1|348785_349433_+|plate	phage baseplate assembly protein V	plate	A0A2H4JBW8	uncultured_Caudovirales_phage	44.8	4.9e-14
QAU22886.1|349439_349733_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAU22887.1|349796_350180_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A088CBP5	Shigella_phage	44.4	2.0e-07
QAU22888.1|350263_350596_+|plate	phage baseplate protein	plate	A0A193GYY8	Enterobacter_phage	58.6	4.2e-30
QAU22889.1|350595_351495_+|plate	baseplate assembly protein	plate	V5YTH6	Pseudomonas_phage	50.8	5.3e-75
QAU25347.1|351520_352096_+|tail	phage tail protein I	tail	V9IQK7	Stenotrophomonas_phage	55.4	5.8e-51
QAU22890.1|352097_353417_+	hypothetical protein	NA	B2ZY49	Ralstonia_phage	31.4	1.4e-07
QAU22891.1|353426_353858_+	hypothetical protein	NA	NA	NA	NA	NA
QAU22892.1|353902_355108_+|tail	phage tail protein	tail	A0A088FVH5	Escherichia_phage	45.2	1.7e-97
QAU22893.1|355107_355617_+|tail	phage major tail tube protein	tail	A0A1W6JT38	Escherichia_phage	57.5	6.7e-51
QAU22894.1|355543_355921_+|tail	phage tail assembly protein	tail	NA	NA	NA	NA
QAU22895.1|356031_358257_+|tail	phage tail protein	tail	A4PE52	Ralstonia_virus	43.8	7.8e-136
QAU22896.1|358261_358744_+|tail	phage tail protein	tail	A0A193GYE0	Enterobacter_phage	46.8	5.0e-32
QAU22897.1|358755_359061_-	addiction module antidote protein, HigA family	NA	NA	NA	NA	NA
QAU22898.1|359073_359355_-	excinuclease ABC subunit A	NA	NA	NA	NA	NA
QAU22899.1|359417_359630_+|tail	phage tail protein	tail	Q9ZXL9	Pseudomonas_virus	38.6	2.0e-09
QAU22900.1|359620_360703_+	phage late control D family protein	NA	A0A088FRU7	Escherichia_phage	51.2	2.0e-97
QAU22901.1|360908_361874_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22902.1|362415_363339_+	arginase	NA	A0A0N9R043	Chrysochromulina_ericina_virus	35.9	3.4e-29
362223:362269	attR	CTTGTAAGCGGTAGGTCGTCTGTTCGAGTCAGACTGTCGGCACCAGT	NA	NA	NA	NA
QAU22903.1|363453_364827_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
QAU22904.1|364980_365478_-	periplasmic heavy metal sensor	NA	NA	NA	NA	NA
QAU22905.1|365652_366348_+	response regulator	NA	W8CYM9	Bacillus_phage	36.2	1.2e-29
QAU22906.1|367973_368495_+	formaldehyde-activating enzyme	NA	NA	NA	NA	NA
QAU22907.1|368528_369566_+	aldo/keto reductase	NA	NA	NA	NA	NA
QAU22908.1|369562_370999_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
QAU22909.1|371121_372510_+	MFS transporter	NA	NA	NA	NA	NA
QAU22910.1|372575_373952_-	2-oxo acid dehydrogenase subunit E2	NA	NA	NA	NA	NA
QAU22911.1|374085_375066_-	alpha-ketoacid dehydrogenase subunit beta	NA	NA	NA	NA	NA
QAU22912.1|375071_376154_-	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	NA	NA	NA	NA	NA
QAU22913.1|376361_377210_+	tryptophan 2,3-dioxygenase	NA	NA	NA	NA	NA
QAU22914.1|377476_379084_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
QAU22915.1|379122_380091_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
QAU22916.1|380247_383106_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.8	7.5e-75
>prophage 3
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	432927	441066	3523985	transposase	Pseudomonas_phage(42.86%)	8	NA	NA
QAU22951.1|432927_433671_-	hypothetical protein	NA	J7HXJ7	Pseudomonas_phage	37.8	3.8e-31
QAU22952.1|433758_434424_-	hypothetical protein	NA	NA	NA	NA	NA
QAU22953.1|435501_435891_-	hypothetical protein	NA	J7HXJ4	Pseudomonas_phage	62.0	2.6e-39
QAU22954.1|436246_436531_-	putative addiction module antidote protein	NA	A4JWV1	Burkholderia_virus	43.3	9.5e-15
QAU22955.1|436545_436839_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	A0A141GEX6	Brucella_phage	49.0	1.5e-18
QAU22956.1|436920_437367_+	lysozyme	NA	A0A0S2SYD0	Pseudomonas_phage	53.6	7.4e-30
QAU22957.1|438725_439484_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU22958.1|439497_441066_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.6	1.5e-157
>prophage 4
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	556616	631380	3523985	transposase,protease	Acidithiobacillus_phage(26.67%)	59	NA	NA
QAU23059.1|556616_557392_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU25358.1|557592_558078_-	DUF456 family protein	NA	NA	NA	NA	NA
QAU25359.1|558200_558836_+	serine/threonine protein kinase	NA	NA	NA	NA	NA
QAU23060.1|558849_559626_-	ferredoxin--NADP reductase	NA	NA	NA	NA	NA
QAU23061.1|559880_561353_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23062.1|561327_562527_-	glycine C-acetyltransferase	NA	V5LQ39	Emiliania_huxleyi_virus	27.1	4.0e-22
QAU23063.1|563195_566075_+	transporter	NA	NA	NA	NA	NA
QAU23064.1|566166_568119_-	recombinase family protein	NA	A0A1B2LRQ3	Wolbachia_phage	40.3	9.9e-103
QAU23065.1|568495_569071_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23066.1|569383_570106_-	UDP-2,3-diacylglucosamine diphosphatase	NA	NA	NA	NA	NA
QAU25360.1|570102_570777_-	peptidylprolyl isomerase	NA	A0A1V0S9I2	Catovirus	30.7	1.1e-08
QAU25361.1|570865_572368_-	Ppx/GppA family phosphatase	NA	NA	NA	NA	NA
QAU23067.1|572510_574631_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
QAU23068.1|574905_575949_-	cytochrome c family protein	NA	NA	NA	NA	NA
QAU23069.1|576314_578768_+	glutamate synthase	NA	NA	NA	NA	NA
QAU23070.1|584159_584645_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23071.1|585190_585730_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23072.1|585742_586141_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23073.1|587564_589133_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.6	1.1e-157
QAU23074.1|589146_589905_+	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU23075.1|591982_592393_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23076.1|592466_592958_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23077.1|593031_593793_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	53.7	5.1e-63
QAU23078.1|593804_595328_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.6	6.5e-118
QAU23079.1|596709_597396_+	RHS repeat-associated core domain-containing protein	NA	S5W9C6	Leptospira_phage	40.2	3.8e-09
QAU23080.1|597409_597805_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23081.1|597911_598238_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23082.1|598518_599211_-	ABC transporter permease	NA	NA	NA	NA	NA
QAU23083.1|599207_600221_-	methionine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	35.8	2.1e-27
QAU23084.1|600353_600833_+	glutathione peroxidase	NA	A0A1S7DLQ4	Molluscum_contagiosum_virus	33.3	6.1e-14
QAU23085.1|600951_602508_-	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
QAU23086.1|602716_603802_-	phospholipase	NA	NA	NA	NA	NA
QAU23087.1|603941_604283_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25362.1|604523_605708_+	winged helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
QAU23088.1|605666_606113_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23089.1|606394_606604_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	58.7	4.8e-16
QAU23090.1|606877_607090_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	60.3	8.4e-16
QAU23091.1|607383_607596_+	cold-shock protein	NA	A0A1X9IGI9	Lactococcus_phage	58.1	6.4e-16
QAU23092.1|607690_608605_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
QAU23093.1|608656_609715_+	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
QAU23094.1|609927_610230_+	DUF962 domain-containing protein	NA	NA	NA	NA	NA
QAU23095.1|610464_612006_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23096.1|612015_612840_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
QAU23097.1|613068_613194_-	50S ribosomal protein L36	NA	NA	NA	NA	NA
QAU23098.1|613257_614169_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
QAU23099.1|615960_616356_-	type II toxin-antitoxin system VapC family toxin	NA	NA	NA	NA	NA
QAU23100.1|616352_616586_-	type II toxin-antitoxin system Phd/YefM family antitoxin	NA	NA	NA	NA	NA
QAU23101.1|616729_618748_-	NADPH-dependent 2,4-dienoyl-CoA reductase	NA	NA	NA	NA	NA
QAU23102.1|618831_619089_-	acyl-CoA-binding protein	NA	NA	NA	NA	NA
QAU23103.1|619197_619878_+	(d)CMP kinase	NA	NA	NA	NA	NA
QAU23104.1|620042_621716_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
QAU23105.1|621784_622087_+	integration host factor subunit beta	NA	NA	NA	NA	NA
QAU23106.1|622554_623330_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU23107.1|623365_624193_-	DNA-binding protein	NA	NA	NA	NA	NA
QAU23108.1|625452_626553_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23109.1|626556_627123_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23110.1|627122_627575_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23111.1|627771_628407_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23112.1|628446_631380_-|transposase	Tn3 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	753482	820073	3523985	tRNA,transposase,protease	Acidithiobacillus_phage(18.75%)	53	NA	NA
QAU23204.1|753482_755006_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.6	6.5e-118
QAU23205.1|755295_755664_+	DNA-binding protein	NA	NA	NA	NA	NA
QAU23206.1|756889_757099_+	DUF1348 family protein	NA	NA	NA	NA	NA
QAU23207.1|757463_758288_+	TenA family transcriptional regulator	NA	NA	NA	NA	NA
QAU25370.1|758423_761123_+	phosphodiesterase	NA	NA	NA	NA	NA
QAU23208.1|761193_761877_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
QAU23209.1|761974_762412_-	barnase inhibitor	NA	NA	NA	NA	NA
QAU23210.1|762408_762846_-	ribonuclease	NA	NA	NA	NA	NA
QAU23211.1|762924_765372_-	mechanosensitive ion channel family protein	NA	A0A076FGK6	Aureococcus_anophage	21.7	6.3e-06
QAU23212.1|765574_767419_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	35.9	2.5e-31
QAU25371.1|767519_769310_-	chloride channel protein	NA	NA	NA	NA	NA
QAU23213.1|769785_771201_+	nodulation protein NfeD	NA	NA	NA	NA	NA
QAU23214.1|771197_772001_+	slipin family protein	NA	A0A2K9KZA2	Tupanvirus	31.5	8.7e-29
QAU23215.1|771987_773337_-	DHA2 family efflux MFS transporter permease subunit	NA	NA	NA	NA	NA
QAU25372.1|773550_774195_-	type B chloramphenicol O-acetyltransferase	NA	M1HKK6	Paramecium_bursaria_Chlorella_virus	45.1	2.1e-25
QAU23216.1|774469_775741_+	bifunctional tetrahydrofolate synthase/dihydrofolate synthase	NA	NA	NA	NA	NA
QAU23217.1|775813_776782_+	SPOR domain-containing protein	NA	NA	NA	NA	NA
QAU23218.1|776805_777426_+	CvpA family protein	NA	NA	NA	NA	NA
QAU23219.1|777459_778935_+	amidophosphoribosyltransferase	NA	A0A0M3SGR2	Mollivirus	41.2	2.9e-86
QAU23220.1|780050_780473_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23221.1|781716_782001_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23222.1|781997_782360_+	transcriptional regulator	NA	NA	NA	NA	NA
QAU23223.1|782719_783067_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23224.1|783258_783531_+	ribbon-helix-helix protein, CopG family	NA	NA	NA	NA	NA
QAU23225.1|783518_783815_+	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
QAU23226.1|784057_784996_-	DNA-binding protein	NA	NA	NA	NA	NA
QAU23227.1|785082_786192_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
QAU23228.1|787127_788696_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.4	3.3e-157
QAU23229.1|788709_789468_+	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU23230.1|789791_790358_-	recombinase family protein	NA	A0JC18	Ralstonia_phage	51.1	2.0e-40
QAU23231.1|790363_790639_-	type II toxin-antitoxin system RelE/ParE family toxin	NA	NA	NA	NA	NA
QAU23232.1|790638_790833_-	antitoxin	NA	NA	NA	NA	NA
QAU23233.1|790998_791994_+	DUF4158 domain-containing protein	NA	Q1MVP5	Enterobacteria_phage	46.3	3.0e-47
QAU23234.1|791950_792382_+|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
QAU23235.1|792763_793153_-	cytochrome C	NA	NA	NA	NA	NA
QAU23236.1|793300_794086_+|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
QAU23237.1|794395_796081_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
QAU23238.1|796136_797465_-	MFS transporter	NA	NA	NA	NA	NA
QAU23239.1|797910_799122_+	porin	NA	NA	NA	NA	NA
QAU23240.1|799165_799906_-	acetoacetyl-CoA reductase	NA	NA	NA	NA	NA
QAU23241.1|800048_800915_-|tRNA	tRNA glutamyl-Q(34) synthetase GluQRS	tRNA	NA	NA	NA	NA
QAU23242.1|801055_801946_+|protease	protease HtpX	protease	NA	NA	NA	NA
QAU23243.1|802029_803895_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.6	3.1e-122
QAU23244.1|804907_807085_-	catalase/peroxidase HPI	NA	NA	NA	NA	NA
QAU23245.1|807708_810282_-	DNA mismatch repair protein MutS	NA	A0A1V0SGG8	Hokovirus	22.7	8.7e-30
QAU23246.1|810344_812159_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23247.1|812181_812691_+	CinA family protein	NA	B5TK85	Pseudomonas_phage	49.4	1.9e-29
QAU25373.1|812816_813851_+	recombinase RecA	NA	A0A0S2MVG1	Bacillus_phage	64.9	5.2e-119
QAU23248.1|814036_814528_+	regulatory protein RecX	NA	NA	NA	NA	NA
QAU23249.1|814611_817248_+|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.6	1.3e-89
QAU23250.1|817520_817727_+	carbon storage regulator	NA	J7I430	Pseudomonas_phage	72.5	2.5e-12
QAU25374.1|817996_818350_-	DUF3757 domain-containing protein	NA	NA	NA	NA	NA
QAU23251.1|819641_820073_+|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	1106290	1159263	3523985	transposase,protease	Acidithiobacillus_phage(37.5%)	50	NA	NA
QAU23475.1|1106290_1107313_+|transposase	ISAs1 family transposase	transposase	NA	NA	NA	NA
QAU23476.1|1108996_1109197_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23477.1|1109228_1109723_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23478.1|1109840_1110272_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
QAU23479.1|1110526_1111015_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23480.1|1111238_1112351_-	hypothetical protein	NA	Q8W619	Enterobacteria_phage	48.5	1.9e-26
QAU23481.1|1112308_1112752_-	hypothetical protein	NA	A0A2R3UAN6	Myoviridae_environmental_samples	41.1	5.9e-11
QAU23482.1|1113023_1113710_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23483.1|1114038_1114812_+	recombinase family protein	NA	NA	NA	NA	NA
QAU23484.1|1114694_1115591_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23485.1|1116881_1117361_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23486.1|1117513_1118353_+	alpha/beta fold hydrolase	NA	NA	NA	NA	NA
QAU23487.1|1118342_1118720_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23488.1|1118716_1119166_+	EamA family transporter	NA	NA	NA	NA	NA
QAU23489.1|1119387_1119639_+	acyl carrier protein	NA	NA	NA	NA	NA
QAU23490.1|1119808_1121026_+	beta-ketoacyl-[acyl-carrier-protein] synthase family protein	NA	NA	NA	NA	NA
QAU23491.1|1121062_1121551_-	8-oxo-dGTP diphosphatase	NA	NA	NA	NA	NA
QAU23492.1|1121634_1122447_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23493.1|1122443_1124852_+	penicillin acylase family protein	NA	NA	NA	NA	NA
QAU23494.1|1124892_1126044_-	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
QAU23495.1|1126049_1126409_-	Spx/MgsR family RNA polymerase-binding regulatory protein	NA	NA	NA	NA	NA
QAU23496.1|1126467_1127295_-	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
QAU23497.1|1127330_1127816_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
QAU23498.1|1127987_1128614_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23499.1|1128625_1130695_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23500.1|1130798_1133447_-	[protein-PII] uridylyltransferase	NA	NA	NA	NA	NA
QAU23501.1|1133501_1134266_-	type I methionyl aminopeptidase	NA	NA	NA	NA	NA
QAU23502.1|1134567_1135452_+	30S ribosomal protein S2	NA	NA	NA	NA	NA
QAU23503.1|1135516_1136395_+	elongation factor Ts	NA	NA	NA	NA	NA
QAU23504.1|1136484_1136877_-	VOC family protein	NA	NA	NA	NA	NA
QAU23505.1|1137030_1137750_+	UMP kinase	NA	NA	NA	NA	NA
QAU23506.1|1137895_1138453_+	ribosome recycling factor	NA	NA	NA	NA	NA
QAU23507.1|1138745_1139483_+	di-trans,poly-cis-decaprenylcistransferase	NA	R9W0U9	Flavobacterium_phage	34.8	4.7e-21
QAU23508.1|1139499_1140321_+	phosphatidate cytidylyltransferase	NA	NA	NA	NA	NA
QAU23509.1|1140564_1141914_+|protease	RIP metalloprotease RseP	protease	NA	NA	NA	NA
QAU23510.1|1142135_1144571_+	outer membrane protein assembly factor BamA	NA	NA	NA	NA	NA
QAU23511.1|1144709_1145738_+	UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase	NA	NA	NA	NA	NA
QAU23512.1|1145885_1146368_+	3-hydroxyacyl-ACP dehydratase FabZ	NA	NA	NA	NA	NA
QAU23513.1|1146364_1147138_+	acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase	NA	NA	NA	NA	NA
QAU23514.1|1147192_1148389_+	lipid-A-disaccharide synthase	NA	NA	NA	NA	NA
QAU23515.1|1148479_1149064_+	ribonuclease HII	NA	G4YAY0	Emiliania_huxleyi_virus	44.6	4.1e-28
QAU23516.1|1149247_1152865_+	DNA polymerase III subunit alpha	NA	A0A0K1Y9G6	Streptomyces_phage	36.9	1.6e-194
QAU23517.1|1152910_1153321_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23518.1|1153350_1153746_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23519.1|1153900_1154659_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU23520.1|1154672_1156241_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.4	4.3e-157
QAU25395.1|1156402_1156660_-	RHS repeat-associated core domain-containing protein	NA	NA	NA	NA	NA
QAU23521.1|1156714_1157146_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
QAU23522.1|1157241_1157604_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23523.1|1157739_1159263_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.6	6.5e-118
>prophage 7
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	1165583	1230143	3523985	tRNA,transposase,plate	Acinetobacter_phage(23.08%)	57	NA	NA
QAU23529.1|1165583_1166015_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
QAU23530.1|1166110_1170082_-	RHS repeat protein	NA	NA	NA	NA	NA
QAU23531.1|1170210_1170393_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23532.1|1170590_1171196_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23533.1|1171694_1172469_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU23534.1|1173233_1174190_+	acetyl-CoA carboxylase carboxyltransferase subunit alpha	NA	NA	NA	NA	NA
QAU23535.1|1174310_1175846_+	adenosine deaminase	NA	NA	NA	NA	NA
QAU23536.1|1175854_1176496_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23537.1|1176573_1177533_-	mechanosensitive ion channel	NA	NA	NA	NA	NA
QAU25396.1|1177649_1178978_+|tRNA	tRNA lysidine(34) synthetase TilS	tRNA	NA	NA	NA	NA
QAU23538.1|1179024_1180314_-	MFS transporter	NA	NA	NA	NA	NA
QAU23539.1|1180482_1180740_+	exodeoxyribonuclease VII small subunit	NA	NA	NA	NA	NA
QAU23540.1|1180927_1181713_-	adenosylmethionine decarboxylase	NA	NA	NA	NA	NA
QAU23541.1|1182019_1182715_+	cAMP-activated global transcriptional regulator CRP	NA	NA	NA	NA	NA
QAU23542.1|1182817_1183615_-	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	52.9	1.4e-63
QAU23543.1|1183662_1184718_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	43.2	1.3e-72
QAU23544.1|1184714_1185314_-	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.6	1.2e-70
QAU23545.1|1185910_1188535_+	response regulator	NA	W8CYF6	Bacillus_phage	32.6	9.8e-29
QAU23546.1|1188561_1188951_+	response regulator	NA	W8CYM9	Bacillus_phage	35.7	8.8e-11
QAU23547.1|1188947_1190666_+	diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	34.5	1.9e-17
QAU25397.1|1190760_1191396_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23548.1|1191470_1192946_-	anthranilate synthase component I	NA	A0A0B5J984	Pandoravirus	31.6	6.5e-38
QAU23549.1|1194473_1194923_-|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
QAU23550.1|1194919_1197643_-	type VI secretion system ATPase TssH	NA	A0A1S6UBG5	Serratia_phage	31.8	6.2e-87
QAU23551.1|1197703_1198162_-	DUF3828 domain-containing protein	NA	NA	NA	NA	NA
QAU23552.1|1198169_1198532_-	CHAP domain-containing protein	NA	H6SUH4	Campylobacter_virus	42.9	2.5e-07
QAU23553.1|1198952_1199294_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23554.1|1199290_1199659_-	DUF2778 domain-containing protein	NA	NA	NA	NA	NA
QAU23555.1|1199779_1200262_-	Hcp family type VI secretion system effector	NA	NA	NA	NA	NA
QAU23556.1|1200277_1201966_-	OmpA family protein	NA	NA	NA	NA	NA
QAU23557.1|1201977_1202634_-	DotU family type IV/VI secretion system protein	NA	NA	NA	NA	NA
QAU23558.1|1202630_1203977_-|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
QAU23559.1|1204106_1205651_-	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
QAU25398.1|1205675_1206182_-	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
QAU23560.1|1206432_1206615_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23561.1|1206611_1207988_+	hypothetical protein	NA	A0A1V0SKV6	Klosneuvirus	22.8	8.4e-32
QAU25399.1|1208194_1210525_+	type VI secretion system tip protein VgrG	NA	A0A2H4JCD4	uncultured_Caudovirales_phage	28.4	4.2e-07
QAU23562.1|1210534_1211377_+	DUF4123 domain-containing protein	NA	NA	NA	NA	NA
QAU23563.1|1212345_1212783_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23564.1|1212846_1213278_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23565.1|1213341_1213776_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23566.1|1213805_1215560_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
QAU23567.1|1215586_1215838_+	PAAR domain-containing protein	NA	A4PE23	Ralstonia_virus	39.7	1.4e-06
QAU23568.1|1215847_1217083_+	hypothetical protein	NA	NA	NA	NA	NA
QAU25400.1|1217247_1220484_+	type VI secretion protein VasK	NA	NA	NA	NA	NA
QAU23569.1|1220480_1221005_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
QAU23570.1|1221168_1222749_+	type VI secretion system protein TssA	NA	NA	NA	NA	NA
QAU25401.1|1222802_1223222_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23571.1|1223249_1223453_+	hypothetical protein	NA	NA	NA	NA	NA
QAU25402.1|1223581_1223986_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23572.1|1224015_1224219_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23573.1|1224292_1224763_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23574.1|1224792_1224996_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23575.1|1225069_1225540_+	DUF3304 domain-containing protein	NA	NA	NA	NA	NA
QAU23576.1|1225569_1227279_+	DUF2235 domain-containing protein	NA	NA	NA	NA	NA
QAU23577.1|1227300_1229124_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
QAU25403.1|1229192_1230143_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
>prophage 8
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	1242701	1275355	3523985	tRNA,plate,protease,tail	Agrobacterium_phage(16.67%)	26	NA	NA
QAU23590.1|1242701_1244972_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	42.9	9.6e-166
QAU25404.1|1245092_1245422_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.0	1.5e-11
QAU23591.1|1245672_1246800_+|tRNA	tRNA 2-thiouridine(34) synthase MnmA	tRNA	NA	NA	NA	NA
QAU25405.1|1246810_1247434_+	lysogenization regulator HflD	NA	NA	NA	NA	NA
QAU23592.1|1247430_1248357_-	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	29.5	1.1e-08
QAU23593.1|1248539_1251146_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
QAU23594.1|1251469_1254214_+	aconitate hydratase AcnA	NA	NA	NA	NA	NA
QAU23595.1|1254490_1256176_+	long-chain-fatty-acid--CoA ligase	NA	A0A2H4PQM9	Staphylococcus_phage	23.7	1.3e-31
QAU23596.1|1256303_1256426_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23597.1|1256458_1257526_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23598.1|1258334_1258568_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23599.1|1258605_1260909_+	hypothetical protein	NA	A0A1J0GW47	Streptomyces_phage	30.4	5.2e-26
QAU23600.1|1260956_1261484_+|tail	phage tail protein	tail	NA	NA	NA	NA
QAU23601.1|1261531_1262236_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23602.1|1262232_1262943_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23603.1|1262939_1264187_+	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
QAU23604.1|1264183_1266169_+	ATP-binding protein	NA	K9MCS8	Sulfolobus_virus	29.8	1.9e-08
QAU23605.1|1266165_1266531_+	hypothetical protein	NA	NA	NA	NA	NA
QAU25406.1|1266490_1267126_+	hypothetical protein	NA	NA	NA	NA	NA
QAU25407.1|1267229_1267505_+	LysM domain-containing protein	NA	NA	NA	NA	NA
QAU23606.1|1267497_1268637_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23607.1|1268656_1269175_+|plate	baseplate assembly protein	plate	NA	NA	NA	NA
QAU23608.1|1269335_1269656_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23609.1|1269663_1270032_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23610.1|1270028_1272485_+|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
QAU23611.1|1272481_1275355_+|plate	putative baseplate assembly protein	plate	NA	NA	NA	NA
>prophage 9
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	1445150	1487322	3523985	transposase	Acidithiobacillus_phage(50.0%)	33	NA	NA
QAU23742.1|1445150_1445926_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU23743.1|1446002_1446542_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23744.1|1446562_1446757_+	YqaE/Pmp3 family membrane protein	NA	NA	NA	NA	NA
QAU23745.1|1446982_1450297_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	33.2	2.0e-26
QAU23746.1|1450142_1455695_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23747.1|1455698_1456007_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23748.1|1456165_1457527_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23749.1|1457643_1457844_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23750.1|1457958_1459632_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23751.1|1460276_1461572_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23752.1|1461651_1461960_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QAU23753.1|1462087_1462537_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23754.1|1462540_1463302_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23755.1|1463226_1463985_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU23756.1|1463998_1464373_-	hypothetical protein	NA	K4I413	Acidithiobacillus_phage	50.4	1.1e-26
QAU23757.1|1464546_1465321_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU23758.1|1467278_1467632_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25419.1|1468099_1468609_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23759.1|1468955_1470053_-	NADH:flavin oxidoreductase/NADH oxidase	NA	NA	NA	NA	NA
QAU25420.1|1470135_1470471_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
QAU23760.1|1470744_1474260_-	methylmalonyl-CoA mutase	NA	NA	NA	NA	NA
QAU23761.1|1474461_1475751_+	dicarboxylate/amino acid:cation symporter	NA	NA	NA	NA	NA
QAU23762.1|1476169_1476601_-|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
QAU23763.1|1476995_1477652_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23764.1|1478146_1480075_+	peptidase S53	NA	A0A1V0SLL0	Klosneuvirus	30.7	1.5e-26
QAU23765.1|1480159_1481209_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23766.1|1481706_1481811_-	hypothetical protein	NA	NA	NA	NA	NA
QAU23767.1|1482287_1482677_+|transposase	transposase	transposase	NA	NA	NA	NA
QAU23768.1|1483377_1483686_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QAU23769.1|1483828_1484143_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23770.1|1484400_1485969_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.4	3.3e-157
QAU23771.1|1485982_1486741_+	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU23772.1|1486776_1487322_+|transposase	transposase	transposase	NA	NA	NA	NA
>prophage 10
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	1588709	1597876	3523985	transposase	Acidithiobacillus_phage(28.57%)	9	NA	NA
QAU23845.1|1588709_1590164_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.7	3.6e-41
QAU23846.1|1590395_1590992_+	TIGR00730 family Rossman fold protein	NA	A0A2I2L3F0	Orpheovirus	24.9	6.3e-08
QAU23847.1|1591006_1592011_+	acryloyl-CoA reductase	NA	NA	NA	NA	NA
QAU23848.1|1592081_1592447_+	response regulator	NA	W8CYM9	Bacillus_phage	33.1	3.7e-11
QAU23849.1|1592546_1593449_-	J domain-containing protein	NA	A0A0G2YAM9	Acanthamoeba_polyphaga_mimivirus	64.2	1.5e-13
QAU23850.1|1593712_1594225_+	peroxiredoxin	NA	A0A1D8KSL1	Synechococcus_phage	37.6	7.2e-21
QAU23851.1|1594381_1594669_+	hypothetical protein	NA	NA	NA	NA	NA
QAU23852.1|1595535_1597104_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.6	3.3e-157
QAU23853.1|1597117_1597876_+	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
>prophage 11
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	2225923	2270463	3523985	holin,transposase	Acidithiobacillus_phage(33.33%)	46	NA	NA
QAU24342.1|2225923_2227492_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.6	1.1e-157
QAU24343.1|2227873_2229988_-	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
QAU24344.1|2230068_2230452_-	RidA family protein	NA	NA	NA	NA	NA
QAU24345.1|2230595_2232758_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A291L9W9	Bordetella_phage	33.0	7.6e-11
QAU24346.1|2232900_2233191_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
QAU24347.1|2233389_2234250_+	VacJ family lipoprotein	NA	NA	NA	NA	NA
QAU24348.1|2234365_2234674_-	STAS domain-containing protein	NA	NA	NA	NA	NA
QAU24349.1|2234660_2235344_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
QAU24350.1|2235367_2236240_-	outer membrane lipid asymmetry maintenance protein MlaD	NA	NA	NA	NA	NA
QAU24351.1|2236289_2237066_-	lipid asymmetry maintenance ABC transporter permease subunit MlaE	NA	NA	NA	NA	NA
QAU24352.1|2237062_2237899_-	ATP-binding cassette domain-containing protein	NA	G3M9Y6	Bacillus_virus	30.8	5.3e-21
QAU24353.1|2237999_2238623_-	guanylate kinase	NA	K4JYM5	Abalone_herpesvirus	33.3	1.8e-18
QAU24354.1|2239494_2240253_+	DUF3800 domain-containing protein	NA	A0A1W6JTE9	Pseudomonas_phage	40.7	1.0e-47
QAU24355.1|2241566_2242424_-	YicC family protein	NA	NA	NA	NA	NA
QAU24356.1|2242497_2243226_+	ribonuclease PH	NA	NA	NA	NA	NA
QAU24357.1|2243243_2243855_+	RdgB/HAM1 family non-canonical purine NTP pyrophosphatase	NA	NA	NA	NA	NA
QAU24358.1|2243845_2245009_+	radical SAM family heme chaperone HemW	NA	NA	NA	NA	NA
QAU24359.1|2245088_2247461_+	DUF1631 family protein	NA	NA	NA	NA	NA
QAU24360.1|2247457_2247796_+	PilZ domain-containing protein	NA	NA	NA	NA	NA
QAU24361.1|2247876_2249196_+	Xaa-Pro dipeptidase	NA	NA	NA	NA	NA
QAU24362.1|2249211_2251305_-|holin	phospholipase C, phosphocholine-specific	holin	NA	NA	NA	NA
QAU24363.1|2251562_2252930_-	M24 family metallopeptidase	NA	NA	NA	NA	NA
QAU24364.1|2252887_2253451_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25476.1|2253553_2253778_+	TIGR02449 family protein	NA	NA	NA	NA	NA
QAU24365.1|2253770_2254109_+	cell division protein ZapA	NA	NA	NA	NA	NA
QAU24366.1|2254388_2255006_+	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
QAU24367.1|2255002_2255455_+	EVE domain-containing protein	NA	NA	NA	NA	NA
QAU24368.1|2256145_2256544_+	hypothetical protein	NA	NA	NA	NA	NA
QAU24369.1|2256802_2257441_+	ribose-5-phosphate isomerase RpiA	NA	NA	NA	NA	NA
QAU24370.1|2257527_2258823_-	citrate synthase	NA	NA	NA	NA	NA
QAU24371.1|2259061_2259307_-	type B 50S ribosomal protein L31	NA	NA	NA	NA	NA
QAU24372.1|2259419_2260361_-	nucleoside hydrolase	NA	NA	NA	NA	NA
QAU24373.1|2260742_2261270_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24374.1|2262065_2262374_+	IS66 family insertion sequence hypothetical protein	NA	NA	NA	NA	NA
QAU24375.1|2262516_2262831_+	hypothetical protein	NA	NA	NA	NA	NA
QAU24376.1|2262722_2263370_+|transposase	transposase	transposase	NA	NA	NA	NA
QAU24377.1|2263527_2263788_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24378.1|2263834_2264248_-	DUF4279 domain-containing protein	NA	NA	NA	NA	NA
QAU24379.1|2264351_2265127_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU24380.1|2265162_2265945_-	hypothetical protein	NA	S5W9C6	Leptospira_phage	32.8	7.4e-09
QAU24381.1|2266009_2266784_+|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU24382.1|2266771_2267083_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24383.1|2267275_2268844_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.6	1.5e-157
QAU24384.1|2268857_2269376_+	hypothetical protein	NA	K4HZD4	Acidithiobacillus_phage	59.4	1.7e-46
QAU24385.1|2269362_2270138_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU24386.1|2270217_2270463_+	hypothetical protein	NA	K4HZD4	Acidithiobacillus_phage	67.7	2.5e-19
>prophage 12
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	2490640	2546288	3523985	tRNA,transposase,protease	Acidithiobacillus_phage(36.36%)	52	NA	NA
QAU24541.1|2490640_2491582_+|protease	serine protease	protease	NA	NA	NA	NA
QAU24542.1|2491602_2491971_-	DUF488 family protein	NA	NA	NA	NA	NA
QAU24543.1|2492043_2492757_-	glycosyltransferase	NA	NA	NA	NA	NA
QAU25500.1|2492826_2493672_-	ParB/RepB/Spo0J family partition protein	NA	I3NLC2	Bifidobacterium_phage	33.3	3.7e-14
QAU24544.1|2493709_2494561_-	ParA family protein	NA	E9LUK9	Lactobacillus_phage	26.7	1.9e-10
QAU24545.1|2494697_2495336_-	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
QAU24546.1|2495463_2495919_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24547.1|2496518_2497871_+	thermolabile hemolysin	NA	NA	NA	NA	NA
QAU24548.1|2498019_2498706_-	YecA family protein	NA	NA	NA	NA	NA
QAU24549.1|2498705_2499485_-	exodeoxyribonuclease III	NA	NA	NA	NA	NA
QAU24550.1|2499567_2500650_-	PA0069 family radical SAM protein	NA	NA	NA	NA	NA
QAU24551.1|2500691_2502854_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24552.1|2503737_2505255_-|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	45.1	1.1e-112
QAU24553.1|2505847_2506306_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24554.1|2506302_2507355_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24555.1|2507490_2507919_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
QAU24556.1|2507987_2509493_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24557.1|2509593_2510355_-	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	53.7	5.1e-63
QAU24558.1|2510366_2510594_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24559.1|2510838_2512407_+|transposase	IS21 family transposase	transposase	K4I413	Acidithiobacillus_phage	55.4	3.3e-157
QAU24560.1|2512420_2513179_+	AAA family ATPase	NA	K4HZD4	Acidithiobacillus_phage	59.8	3.3e-78
QAU24561.1|2513508_2513901_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAU24562.1|2514067_2514277_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24563.1|2514315_2514663_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24564.1|2515095_2515311_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24565.1|2515329_2515752_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24566.1|2516594_2517370_-|transposase	IS5 family transposase	transposase	A0A0N9SHJ4	Paenibacillus_phage	45.0	5.1e-26
QAU24567.1|2517428_2519762_-	RHS repeat protein	NA	NA	NA	NA	NA
QAU24568.1|2519712_2520900_-	RHS repeat protein	NA	NA	NA	NA	NA
QAU24569.1|2520991_2521174_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24570.1|2521466_2523407_+	acetate--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	38.3	3.0e-83
QAU24571.1|2523494_2524139_+	4'-phosphopantetheinyl transferase superfamily protein	NA	NA	NA	NA	NA
QAU24572.1|2524184_2524928_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
QAU25501.1|2525040_2525427_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
QAU24573.1|2525466_2525889_-	biopolymer transporter ExbD	NA	NA	NA	NA	NA
QAU25502.1|2525899_2526634_-	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
QAU24574.1|2526720_2527380_-	energy transducer TonB	NA	NA	NA	NA	NA
QAU25503.1|2527600_2528887_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24575.1|2529202_2531617_-	DNA topoisomerase (ATP-hydrolyzing) subunit B	NA	G3M9Z3	Bacillus_virus	35.6	6.3e-115
QAU25504.1|2531688_2532771_-	DNA replication/repair protein RecF	NA	NA	NA	NA	NA
QAU24576.1|2532860_2533961_-	DNA polymerase III subunit beta	NA	R9TRR6	Rhizobium_phage	34.8	8.5e-51
QAU24577.1|2534206_2535547_-	chromosomal replication initiator protein DnaA	NA	NA	NA	NA	NA
QAU24578.1|2535730_2535865_+	50S ribosomal protein L34	NA	NA	NA	NA	NA
QAU24579.1|2535877_2536258_+	ribonuclease P protein component	NA	NA	NA	NA	NA
QAU24580.1|2536318_2537998_+	membrane protein insertase YidC	NA	NA	NA	NA	NA
QAU24581.1|2538048_2539401_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE	tRNA	NA	NA	NA	NA
QAU24582.1|2539426_2540974_-	exo-alpha-sialidase	NA	NA	NA	NA	NA
QAU24583.1|2541350_2542508_+	beta-lactamase	NA	NA	NA	NA	NA
QAU24584.1|2542531_2543431_-	ribokinase	NA	NA	NA	NA	NA
QAU24585.1|2543603_2544215_-	hypothetical protein	NA	NA	NA	NA	NA
QAU24586.1|2544325_2545666_-|protease	ATP-dependent protease ATPase subunit HslU	protease	A0A173GFL6	Erwinia_phage	28.5	2.7e-43
QAU24587.1|2545754_2546288_-|protease	ATP-dependent protease subunit HslV	protease	NA	NA	NA	NA
>prophage 13
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	3005074	3014797	3523985		Escherichia_phage(28.57%)	7	NA	NA
QAU24930.1|3005074_3006487_-	mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase	NA	A0A1V0SH58	Hokovirus	29.9	3.6e-54
QAU24931.1|3006490_3007417_-	dTDP-4-dehydrorhamnose reductase	NA	A0A291LA50	Escherichia_phage	30.5	5.9e-21
QAU24932.1|3007413_3007971_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	I7HJC4	Enterobacteria_phage	50.0	1.0e-44
QAU24933.1|3007982_3008855_-	glucose-1-phosphate thymidylyltransferase	NA	K7QKA7	Escherichia_phage	61.0	6.2e-97
QAU24934.1|3008851_3009901_-	dTDP-glucose 4,6-dehydratase	NA	I7HTA3	Enterobacteria_phage	47.9	6.3e-80
QAU24935.1|3009919_3011281_+	acyltransferase	NA	A9YX16	Burkholderia_phage	31.0	2.1e-22
QAU24936.1|3011482_3014797_+	filamentous hemagglutinin N-terminal domain-containing protein	NA	A0A0R6PJK4	Moraxella_phage	33.2	2.0e-26
>prophage 14
CP035300	Dyella sp. M7H15-1 chromosome, complete genome	3523985	3118077	3154201	3523985	tail,plate,protease,tRNA,transposase	Streptomyces_phage(20.0%)	42	NA	NA
QAU25012.1|3118077_3118482_-|plate	baseplate assembly protein	plate	NA	NA	NA	NA
QAU25013.1|3118485_3118902_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25541.1|3118915_3119530_-	Rhs element Vgr protein	NA	NA	NA	NA	NA
QAU25014.1|3119550_3120600_-	phage late control D family protein	NA	NA	NA	NA	NA
QAU25542.1|3120602_3121250_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
QAU25015.1|3121249_3121855_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25016.1|3122496_3123027_-|tail	phage tail protein	tail	NA	NA	NA	NA
QAU25017.1|3123030_3123228_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25018.1|3123564_3124011_-|tail	phage tail protein	tail	NA	NA	NA	NA
QAU25019.1|3124026_3125673_-|tail	phage tail sheath family protein	tail	A0A1J0GW47	Streptomyces_phage	32.7	9.4e-38
QAU25020.1|3125695_3126256_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25543.1|3126262_3126886_-	DUF4255 domain-containing protein	NA	NA	NA	NA	NA
QAU25021.1|3126937_3127741_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25022.1|3127758_3128358_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25023.1|3128362_3128764_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25024.1|3128894_3129374_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25544.1|3129644_3129881_-	hypothetical protein	NA	NA	NA	NA	NA
QAU25025.1|3130175_3130847_+	response regulator transcription factor	NA	NA	NA	NA	NA
QAU25026.1|3131151_3132657_+	cobyric acid synthase	NA	NA	NA	NA	NA
QAU25545.1|3132731_3133040_+	zinc ribbon domain-containing protein	NA	NA	NA	NA	NA
QAU25027.1|3133600_3135379_+|tRNA	aspartate--tRNA ligase	tRNA	NA	NA	NA	NA
QAU25028.1|3135457_3136102_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
QAU25029.1|3136256_3136688_+|transposase	IS200/IS605 family transposase	transposase	NA	NA	NA	NA
QAU25030.1|3136878_3137982_-	pentapeptide repeat-containing protein	NA	NA	NA	NA	NA
QAU25031.1|3138227_3138959_+	YebC/PmpR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
QAU25546.1|3138991_3139510_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
QAU25032.1|3139506_3140103_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
QAU25033.1|3140136_3142014_+	potassium transporter Kup	NA	M1IBC2	Acanthocystis_turfacea_Chlorella_virus	34.1	3.1e-85
QAU25547.1|3142082_3142217_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
QAU25034.1|3142172_3143216_+	Holliday junction branch migration DNA helicase RuvB	NA	B3GAM6	uncultured_virus	29.1	1.9e-07
QAU25035.1|3143217_3143625_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
QAU25036.1|3143657_3144344_+	protein TolQ	NA	NA	NA	NA	NA
QAU25037.1|3144381_3144828_+	protein TolR	NA	NA	NA	NA	NA
QAU25038.1|3144978_3145923_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
QAU25039.1|3145931_3147254_+	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA	NA
QAU25040.1|3147503_3148013_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
QAU25548.1|3148054_3148864_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
QAU25549.1|3148900_3149572_+	7-carboxy-7-deazaguanine synthase QueE	NA	A0A218M2Y8	Acidovorax_phage	30.8	8.0e-12
QAU25041.1|3149709_3150000_+	DUF493 family protein	NA	NA	NA	NA	NA
QAU25042.1|3150154_3150835_+	lipoyl(octanoyl) transferase LipB	NA	NA	NA	NA	NA
QAU25043.1|3150831_3151842_+	lipoyl synthase	NA	NA	NA	NA	NA
QAU25044.1|3151852_3154201_+|tail,protease	tail-specific protease	tail,protease	A0A0R6PIZ1	Moraxella_phage	33.4	7.0e-87
