The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP035090	Paracoccus denitrificans strain ATCC 19367 chromosome 1, complete sequence	2858426	808724	815036	2858426	terminase	Aeropyrum_pernix_spindle-shaped_virus(12.5%)	10	NA	NA
QAR27456.1|808724_810392_-	DNA cytosine methyltransferase	NA	G3CB01	Aeropyrum_pernix_spindle-shaped_virus	28.1	7.6e-19
QAR25518.1|810327_810792_+	DNA mismatch endonuclease Vsr	NA	E5E3X5	Burkholderia_phage	49.7	1.5e-36
QAR25519.1|810807_811032_-	hypothetical protein	NA	NA	NA	NA	NA
QAR25520.1|810967_811459_-	hypothetical protein	NA	A0A0U2C138	Paracoccus_phage	48.7	3.7e-30
QAR25521.1|811442_811913_-|terminase	phage terminase small subunit P27 family	terminase	A0A1B0RXI5	Streptococcus_phage	33.6	8.4e-16
QAR25522.1|812119_812326_+	cold-shock protein	NA	Q9AZD3	Lactococcus_phage	56.9	1.2e-11
QAR27457.1|812435_812711_+	DUF982 domain-containing protein	NA	NA	NA	NA	NA
QAR25523.1|812980_813205_-	hypothetical protein	NA	K4I1E3	Acidithiobacillus_phage	66.7	1.2e-17
QAR25524.1|813201_814563_-	site-specific DNA-methyltransferase	NA	A0A0A8ILE7	Aurantimonas_phage	41.3	1.2e-78
QAR27458.1|814691_815036_-	HNH endonuclease	NA	A0A2D1GNP5	Pseudomonas_phage	65.8	2.1e-24
>prophage 2
CP035090	Paracoccus denitrificans strain ATCC 19367 chromosome 1, complete sequence	2858426	879359	886189	2858426		Acinetobacter_phage(50.0%)	8	NA	NA
QAR25579.1|879359_879950_+	aminodeoxychorismate/anthranilate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	54.5	8.0e-56
QAR25580.1|879946_880984_+	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	41.0	1.0e-58
QAR25581.1|880976_881645_+	uracil-DNA glycosylase	NA	A0A077BCN4	Equid_alphaherpesvirus	49.2	4.2e-37
QAR25582.1|881654_882446_+	indole-3-glycerol phosphate synthase TrpC	NA	A0A0P0IR83	Acinetobacter_phage	52.1	3.2e-60
QAR25583.1|882442_882916_+	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
QAR25584.1|882926_884099_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
QAR25585.1|884208_884907_+	transcriptional repressor LexA	NA	E5DV74	Deep-sea_thermophilic_phage	35.6	6.8e-14
QAR25586.1|885031_886189_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	33.0	2.3e-46
>prophage 3
CP035090	Paracoccus denitrificans strain ATCC 19367 chromosome 1, complete sequence	2858426	1164400	1200362	2858426	tRNA,plate,integrase	uncultured_Mediterranean_phage(25.0%)	33	1144535:1144551	1187777:1187793
1144535:1144551	attL	CGGCATCGTGCAGGATG	NA	NA	NA	NA
QAR25844.1|1164400_1165315_+|integrase	integrase	integrase	NA	NA	NA	NA
QAR25845.1|1165553_1166507_-|integrase	integrase	integrase	NA	NA	NA	NA
QAR25846.1|1166503_1166779_-	hypothetical protein	NA	NA	NA	NA	NA
QAR25847.1|1166872_1167661_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAR25848.1|1168704_1170042_-	hypothetical protein	NA	NA	NA	NA	NA
QAR25849.1|1170181_1171093_+	EamA family transporter RarD	NA	NA	NA	NA	NA
QAR25850.1|1171134_1171830_+	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
QAR25851.1|1171911_1173234_+	quinoprotein	NA	NA	NA	NA	NA
QAR25852.1|1173230_1174700_+	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
QAR25853.1|1174709_1175570_-	hypothetical protein	NA	NA	NA	NA	NA
QAR25854.1|1175626_1176919_-|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	45.0	2.2e-90
QAR27479.1|1177000_1177330_-	SoxS protein	NA	NA	NA	NA	NA
QAR25855.1|1177496_1178516_+	methylmalonyl Co-A mutase-associated GTPase MeaB	NA	NA	NA	NA	NA
QAR25856.1|1178499_1179090_+	methylated-DNA--[protein]-cysteine S-methyltransferase	NA	A0A0G2Y1B6	Acanthamoeba_polyphaga_mimivirus	47.3	3.6e-16
QAR25857.1|1179245_1179521_+	50S ribosomal protein L28	NA	NA	NA	NA	NA
QAR25858.1|1179794_1180211_+	hypothetical protein	NA	NA	NA	NA	NA
QAR25859.1|1180210_1180564_+	hypothetical protein	NA	NA	NA	NA	NA
QAR25860.1|1180551_1181493_-	hypothetical protein	NA	NA	NA	NA	NA
QAR25861.1|1181485_1182472_-	DUF4150 domain-containing protein	NA	NA	NA	NA	NA
QAR25862.1|1182468_1183533_-	3-oxoacyl-ACP synthase	NA	NA	NA	NA	NA
QAR25863.1|1183529_1184630_-	DUF2169 domain-containing protein	NA	NA	NA	NA	NA
QAR25864.1|1184638_1187386_-	type VI secretion system ATPase TssH	NA	H6X3M6	Enterobacteria_phage	30.3	1.1e-83
QAR25865.1|1187558_1189664_+	serine/threonine protein kinase	NA	A0A2H4UVE2	Bodo_saltans_virus	22.8	5.8e-08
1187777:1187793	attR	CATCCTGCACGATGCCG	NA	NA	NA	NA
QAR25866.1|1189794_1190925_+	hypothetical protein	NA	NA	NA	NA	NA
QAR25867.1|1190982_1191525_+	type VI secretion system contractile sheath small subunit	NA	NA	NA	NA	NA
QAR25868.1|1191528_1193043_+	type VI secretion system contractile sheath large subunit	NA	NA	NA	NA	NA
QAR25869.1|1193187_1193676_+	type VI secretion system tube protein Hcp	NA	NA	NA	NA	NA
QAR25870.1|1193701_1194448_+|plate	type VI secretion system baseplate subunit TssE	plate	NA	NA	NA	NA
QAR25871.1|1194447_1196310_+|plate	type VI secretion system baseplate subunit TssF	plate	NA	NA	NA	NA
QAR25872.1|1196273_1197311_+|plate	type VI secretion system baseplate subunit TssG	plate	NA	NA	NA	NA
QAR25873.1|1197310_1198546_+	type VI secretion system-associated FHA domain protein TagH	NA	NA	NA	NA	NA
QAR27480.1|1198560_1199016_+	type VI secretion system lipoprotein TssJ	NA	NA	NA	NA	NA
QAR25874.1|1199027_1200362_+|plate	type VI secretion system baseplate subunit TssK	plate	NA	NA	NA	NA
>prophage 4
CP035090	Paracoccus denitrificans strain ATCC 19367 chromosome 1, complete sequence	2858426	1831283	1847450	2858426		Paracoccus_phage(28.57%)	21	NA	NA
QAR26448.1|1831283_1831418_-	DUF4031 domain-containing protein	NA	D4FUN1	Pseudomonas_phage	86.7	3.4e-07
QAR26449.1|1831417_1831621_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26450.1|1831629_1831836_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26451.1|1831828_1832179_-	DUF4326 domain-containing protein	NA	A0A222ZLE2	Mycobacterium_phage	47.5	2.9e-21
QAR26452.1|1832175_1832526_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26453.1|1832657_1832915_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26454.1|1833188_1833464_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26455.1|1833589_1834384_-	DNA adenine methylase	NA	A0A0K1LM14	Caulobacter_phage	62.0	9.6e-89
QAR26456.1|1834380_1835001_-	hypothetical protein	NA	A0A2I2MUH3	uncultured_Caudovirales_phage	35.7	2.5e-39
QAR27523.1|1834958_1835324_-	hypothetical protein	NA	A0A1B0V7P0	Salmonella_phage	36.5	2.9e-16
QAR26457.1|1836819_1837116_+	type II toxin-antitoxin system HigB family toxin	NA	A0A0P0ZE17	Stx2-converting_phage	38.0	6.7e-11
QAR26458.1|1837115_1837493_+	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	44.4	2.5e-23
QAR26459.1|1837836_1838070_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26460.1|1838356_1839310_-	DUF3380 domain-containing protein	NA	D2JTA3	Pseudomonas_phage	37.2	5.3e-17
QAR26461.1|1839379_1839637_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26462.1|1839663_1840017_-	DUF2793 domain-containing protein	NA	A0A0B5A0F6	Paracoccus_phage	51.7	2.7e-27
QAR26463.1|1840024_1844044_-	hypothetical protein	NA	A0A0B5A7K5	Paracoccus_phage	40.0	1.2e-243
QAR26464.1|1844048_1844486_-	peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	42.2	1.8e-28
QAR26465.1|1844482_1845367_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	46.0	2.7e-68
QAR26466.1|1845363_1845990_-	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	58.3	4.6e-62
QAR26467.1|1845989_1847450_-	hypothetical protein	NA	Q6UYJ3	Burkholderia_phage	35.9	7.4e-10
>prophage 5
CP035090	Paracoccus denitrificans strain ATCC 19367 chromosome 1, complete sequence	2858426	1912770	1943550	2858426	portal,integrase,head,tail,capsid,protease,terminase	Rhizobium_phage(21.05%)	41	1912237:1912258	1944640:1944661
1912237:1912258	attL	CATCCGCGCCGAGACCATCGCC	NA	NA	NA	NA
QAR26523.1|1912770_1913841_-|integrase	site-specific integrase	integrase	A0A067XRF8	Caulobacter_phage	29.1	1.5e-15
QAR26524.1|1914039_1914348_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26525.1|1914391_1915120_-	hypothetical protein	NA	A0A0U2BXK1	Paracoccus_phage	59.5	2.9e-76
QAR26526.1|1915116_1915560_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26527.1|1915549_1915756_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26528.1|1915755_1916661_-	hypothetical protein	NA	R9TN97	Rhizobium_phage	78.6	1.9e-24
QAR26529.1|1916657_1917077_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26530.1|1917073_1919719_-	DNA methylase N-4	NA	R9TRS8	Rhizobium_phage	60.6	0.0e+00
QAR26531.1|1919722_1920841_-	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	32.2	5.2e-32
QAR26532.1|1920976_1921189_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26533.1|1921188_1921389_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26534.1|1921388_1921592_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26535.1|1921855_1922341_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26536.1|1922637_1922973_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26537.1|1922972_1923500_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26538.1|1923483_1923732_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26539.1|1924064_1924397_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27528.1|1924428_1924704_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26540.1|1924700_1924913_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26541.1|1925074_1925404_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26542.1|1925524_1926667_+	hypothetical protein	NA	I3UM61	Rhodobacter_phage	54.4	2.5e-98
QAR26543.1|1926659_1928501_+	hypothetical protein	NA	G8DGC0	Emiliania_huxleyi_virus	49.3	2.5e-148
QAR26544.1|1928959_1929718_+	hypothetical protein	NA	I3ULZ3	Rhodobacter_phage	30.9	7.0e-12
QAR26545.1|1929887_1930238_+	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	56.7	1.0e-26
QAR27529.1|1930287_1930548_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26546.1|1930720_1931224_+	resolvase	NA	I3ULZ5	Rhodobacter_phage	48.4	6.4e-30
QAR26547.1|1931213_1932935_+|terminase	terminase large subunit	terminase	Q3HQS7	Burkholderia_phage	42.3	9.6e-118
QAR26548.1|1932934_1934272_+|portal	phage portal protein	portal	M4QP41	Tetraselmis_viridis_virus	40.2	5.2e-79
QAR26549.1|1934258_1935101_+|protease	Clp protease ClpP	protease	A0A0U4B0F3	Pseudomonas_phage	54.0	7.9e-73
QAR26550.1|1935112_1936462_+|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	47.4	1.3e-74
QAR26551.1|1936519_1936828_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26552.1|1936752_1937364_+	hypothetical protein	NA	M4QNT5	Tetraselmis_viridis_virus	58.1	1.4e-26
QAR26553.1|1937323_1937881_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26554.1|1937874_1938234_+|head,tail	head-tail adaptor protein	head,tail	B4UTP9	Rhizobium_phage	35.8	1.1e-07
QAR26555.1|1938230_1938617_+	DUF3168 domain-containing protein	NA	A0A141GEW7	Brucella_phage	43.0	7.6e-15
QAR26556.1|1938613_1938970_-	hypothetical protein	NA	NA	NA	NA	NA
QAR26557.1|1938994_1939441_+	HK97 gp10 family phage protein	NA	NA	NA	NA	NA
QAR26558.1|1939433_1939631_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26559.1|1939632_1940094_+	hypothetical protein	NA	NA	NA	NA	NA
QAR26560.1|1940093_1940483_+	gene transfer agent family protein	NA	B4UTQ4	Rhizobium_phage	45.5	5.7e-18
QAR26561.1|1940643_1943550_+	hypothetical protein	NA	A0A1V1FCQ8	Vibrio_phage	56.9	9.8e-14
1944640:1944661	attR	CATCCGCGCCGAGACCATCGCC	NA	NA	NA	NA
>prophage 6
CP035090	Paracoccus denitrificans strain ATCC 19367 chromosome 1, complete sequence	2858426	2534930	2574137	2858426	tRNA,portal,integrase,head,tail,capsid,protease,terminase	Rhodobacter_phage(34.78%)	47	2537766:2537783	2560180:2560197
QAR27100.1|2534930_2536877_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L6B6	Tupanvirus	36.5	1.7e-118
QAR27101.1|2537047_2537797_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
2537766:2537783	attL	CGCTGGACGAGGTGCTGG	NA	NA	NA	NA
QAR27102.1|2537839_2539183_-	polyhydroxyalkanoate depolymerase	NA	NA	NA	NA	NA
QAR27564.1|2539752_2541618_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
QAR27103.1|2541731_2542205_+	Phasin	NA	NA	NA	NA	NA
QAR27104.1|2542353_2542941_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
QAR27565.1|2543107_2544181_-|integrase	integrase	integrase	I3UM24	Rhodobacter_phage	46.6	7.4e-76
QAR27105.1|2544183_2544414_-	DNA-binding protein	NA	I3UM25	Rhodobacter_phage	64.9	3.2e-21
QAR27106.1|2544413_2545142_-	hypothetical protein	NA	A0A0U2BXK1	Paracoccus_phage	60.8	7.0e-78
QAR27107.1|2545138_2545579_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27108.1|2545568_2545841_-	hypothetical protein	NA	A0A0K1Y6J3	Rhodobacter_phage	65.5	8.6e-05
QAR27109.1|2545840_2546569_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27110.1|2546565_2547366_-	DUF550 domain-containing protein	NA	K7PGV7	Enterobacterial_phage	57.1	2.6e-25
QAR27566.1|2547362_2547791_-	hypothetical protein	NA	A0A097PBD6	Delftia_phage	60.3	1.6e-37
QAR27111.1|2547790_2550442_-	DNA methylase N-4	NA	R9TRS8	Rhizobium_phage	60.9	0.0e+00
QAR27112.1|2550445_2551564_-	DNA polymerase III subunit beta	NA	A0A0A8IL17	Aurantimonas_phage	32.4	3.1e-32
QAR27113.1|2551700_2551913_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27114.1|2551912_2552170_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27115.1|2552169_2552361_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27116.1|2552486_2552714_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27117.1|2552703_2553231_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27118.1|2553402_2554014_-	LexA family transcriptional regulator	NA	NA	NA	NA	NA
QAR27119.1|2554125_2554392_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
QAR27120.1|2554366_2554702_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27121.1|2555021_2555303_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27122.1|2555449_2555764_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27123.1|2555760_2555955_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27124.1|2555951_2557094_+	hypothetical protein	NA	I3UM61	Rhodobacter_phage	54.4	9.9e-103
QAR27125.1|2557086_2557335_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27126.1|2557331_2559170_+	hypothetical protein	NA	H6WBR7	Rhodobacter_phage	49.9	1.9e-143
QAR27567.1|2559545_2560304_+	hypothetical protein	NA	I3ULZ3	Rhodobacter_phage	32.3	7.0e-12
2560180:2560197	attR	CGCTGGACGAGGTGCTGG	NA	NA	NA	NA
QAR27127.1|2560473_2560824_+	HNH endonuclease	NA	I3ULZ4	Rhodobacter_phage	56.7	1.0e-26
QAR27128.1|2560816_2561134_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27129.1|2561308_2561812_+	resolvase	NA	I3ULZ5	Rhodobacter_phage	48.4	6.4e-30
QAR27130.1|2561801_2563523_+|terminase	terminase large subunit	terminase	Q3HQS7	Burkholderia_phage	42.5	6.7e-119
QAR27131.1|2563522_2564860_+|portal	phage portal protein	portal	M4QP41	Tetraselmis_viridis_virus	40.2	6.8e-79
QAR27132.1|2564846_2565689_+|protease	Clp protease ClpP	protease	A0A0U4B0F3	Pseudomonas_phage	54.0	7.9e-73
QAR27133.1|2565700_2567050_+|capsid	phage major capsid protein	capsid	Q6JIM7	Burkholderia_virus	47.4	1.3e-74
QAR27134.1|2567107_2567416_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27135.1|2567340_2567952_+	hypothetical protein	NA	M4QNT5	Tetraselmis_viridis_virus	58.1	1.4e-26
QAR27136.1|2567911_2568469_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27137.1|2568462_2568813_+|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
QAR27138.1|2568809_2569217_+	DUF3168 domain-containing protein	NA	A0A141GEW7	Brucella_phage	31.6	2.9e-12
QAR27139.1|2569379_2569859_+	HK97 gp10 family phage protein	NA	B4UTQ0	Rhizobium_phage	36.2	2.8e-14
QAR27568.1|2569964_2570381_+	hypothetical protein	NA	NA	NA	NA	NA
QAR27140.1|2570380_2570836_+	gene transfer agent family protein	NA	A0A141GEX0	Brucella_phage	42.9	1.4e-15
QAR27141.1|2571161_2574137_+	hypothetical protein	NA	A0A2D0W9N5	Bordetella_phage	41.0	9.6e-49
>prophage 1
CP035091	Paracoccus denitrificans strain ATCC 19367 chromosome 2, complete sequence	1730087	49714	64038	1730087	protease,capsid,head,tail,portal	Paracoccus_phage(27.27%)	17	NA	NA
QAR27645.1|49714_50437_-	DUF2793 domain-containing protein	NA	A0A1V0DY81	Dinoroseobacter_phage	33.1	6.8e-25
QAR27646.1|50429_54320_-	host specificity protein	NA	A0A0K1LL82	Rhodobacter_phage	38.0	1.2e-211
QAR27647.1|54338_54764_-	peptidase	NA	A0A1V0DYB6	Dinoroseobacter_phage	53.7	7.3e-35
QAR27648.1|54760_55579_-	DUF2163 domain-containing protein	NA	A0A0B5A5B8	Paracoccus_phage	40.6	8.8e-45
QAR27649.1|55575_56208_-	TIGR02217 family protein	NA	A0A0B5A2K3	Paracoccus_phage	47.4	4.0e-53
QAR27650.1|56209_56881_-|tail	phage tail tape measure protein	tail	C0LP53	Escherichia_virus	41.5	9.8e-10
QAR27651.1|56905_57118_-|tail	phage tail assembly chaperone	tail	NA	NA	NA	NA
QAR27652.1|57114_57432_-	gene transfer agent family protein	NA	NA	NA	NA	NA
QAR27653.1|57433_57847_-|tail	phage major tail protein, TP901-1 family	tail	I3UM07	Rhodobacter_phage	36.6	1.3e-15
QAR27654.1|57859_58279_-	DUF3168 domain-containing protein	NA	NA	NA	NA	NA
QAR27655.1|58275_58626_-|head,tail	head-tail adaptor protein	head,tail	NA	NA	NA	NA
QAR27656.1|58622_59240_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27657.1|59368_60535_-|capsid	phage major capsid protein	capsid	A0A2D1GNH4	Pseudomonas_phage	36.7	2.8e-60
QAR27658.1|60558_61116_-|head,protease	HK97 family phage prohead protease	head,protease	A0A0U2BX10	Paracoccus_phage	50.9	1.1e-33
QAR27659.1|61096_61330_-	hypothetical protein	NA	NA	NA	NA	NA
QAR27660.1|61331_62534_-|portal	phage portal protein	portal	A0A0K1LLE7	Bacillus_phage	37.4	7.5e-61
QAR27661.1|62682_64038_-	ATP-binding protein	NA	A0A0K1LMR9	Caulobacter_phage	40.2	1.8e-71
>prophage 2
CP035091	Paracoccus denitrificans strain ATCC 19367 chromosome 2, complete sequence	1730087	797536	805698	1730087		uncultured_virus(33.33%)	8	NA	NA
QAR28306.1|797536_799315_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	39.7	1.1e-39
QAR28307.1|799374_799671_-	DUF2218 domain-containing protein	NA	NA	NA	NA	NA
QAR28308.1|799865_800552_-	aquaporin Z	NA	A0A1B1ISL4	uncultured_Mediterranean_phage	55.2	4.0e-06
QAR28309.1|800699_802514_+	ATP-binding cassette domain-containing protein	NA	A0A2K9L3Z8	Tupanvirus	25.3	2.9e-32
QAR28310.1|802704_802911_+	cold-shock protein	NA	A0A1W6JNX5	Morganella_phage	51.6	1.6e-11
QAR28311.1|802967_803177_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28312.1|803732_805370_-	chaperonin GroEL	NA	A0A240F779	uncultured_virus	61.0	1.2e-173
QAR28313.1|805410_805698_-	co-chaperone GroES	NA	A0A221S4G8	uncultured_virus	53.3	2.2e-19
>prophage 3
CP035091	Paracoccus denitrificans strain ATCC 19367 chromosome 2, complete sequence	1730087	885127	892254	1730087		Azospirillum_phage(14.29%)	14	NA	NA
QAR28398.1|885127_885601_-	XRE family transcriptional regulator	NA	B0VK04	Azospirillum_phage	35.8	8.2e-11
QAR28399.1|885599_885818_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28400.1|885814_886156_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28401.1|886273_886603_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28402.1|886602_887313_+	hypothetical protein	NA	A0A291AUT5	Sinorhizobium_phage	58.1	7.1e-67
QAR28403.1|887309_887522_+	hypothetical protein	NA	A0A1X9HWB0	Ruegeria_phage	50.0	7.1e-07
QAR28404.1|887523_887808_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28405.1|887876_888350_+	hypothetical protein	NA	A0A218MLE3	uncultured_virus	37.6	7.4e-20
QAR28406.1|888358_888715_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28407.1|888714_889473_+	DUF1376 domain-containing protein	NA	A0A0U2RT81	Escherichia_phage	38.5	4.8e-13
QAR28408.1|889450_890095_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28409.1|890100_890424_+	hypothetical protein	NA	NA	NA	NA	NA
QAR28410.1|890426_890828_+	hypothetical protein	NA	Q716H4	Shigella_phage	38.5	1.7e-17
QAR28411.1|890928_892254_+	hypothetical protein	NA	K4NWT7	Pseudomonas_phage	36.1	1.7e-34
