assembly_id	genome_id	genome_def	crispr_array_locus_merge	crispr_array_location_merge	crispr_locus_id	crispr_pred_method	array_in_prot	prot_within_array_20000	prot_in_genome	crispr_type_by_cas_prot	consensus_repeat	repeat_length	self-targeting_spacer_number	self-targeting_target_number	spacer_location	protospacer_location	repeat_type	spacer_locus_num	spacer_num	correct_crispr_type	genome_cas_prots	unknown_protein_around_crispr	L10	L10_domain	L9	L9_domain	L8	L8_domain	L7	L7_domain	L6	L6_domain	L5	L5_domain	L4	L4_domain	L3	L3_domain	L2	L2_domain	L1	L1_domain	R1	R1_domain	R2	R2_domain	R3	R3_domain	R4	R4_domain	R5	R5_domain	R6	R6_domain	R7	R7_domain	R8	R8_domain	R9	R9_domain	R10	R10_domain
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	1	125634-125741	1	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	ATCCGTGCCTTTTCCCTGCATCCGT	25	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA|191aa|up_9|CP025571.1_112982_113555_+,NA|175aa|up_8|CP025571.1_113941_114466_+,NA|301aa|up_5|CP025571.1_118154_119057_+,NA|76aa|up_4|CP025571.1_119183_119411_+,NA|104aa|up_3|CP025571.1_119464_119776_+,NA|128aa|up_2|CP025571.1_119880_120264_+,NA|132aa|down_8|CP025571.1_135056_135452_+,NA|163aa|down_9|CP025571.1_135476_135965_-	NA|191aa|up_9|CP025571.1_112982_113555_+	NA	NA|175aa|up_8|CP025571.1_113941_114466_+	NA	NA|453aa|up_7|CP025571.1_115802_117161_+	COG4962, CpaF, Flp pilus assembly protein, ATPase CpaF [Intracellular trafficking and secretion]	NA|317aa|up_6|CP025571.1_117151_118102_+	pfam00482, T2SSF, Type II secretion system (T2SS), protein F	NA|301aa|up_5|CP025571.1_118154_119057_+	NA	NA|76aa|up_4|CP025571.1_119183_119411_+	NA	NA|104aa|up_3|CP025571.1_119464_119776_+	NA	NA|128aa|up_2|CP025571.1_119880_120264_+	NA	NA|1108aa|up_1|CP025571.1_120260_123584_+	smart01043, BTAD, Bacterial transcriptional activator domain	NA|494aa|up_0|CP025571.1_123808_125290_+	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2	NA|324aa|down_0|CP025571.1_125861_126833_-	COG1893, ApbA, Ketopantoate reductase [Coenzyme metabolism]	NA|440aa|down_1|CP025571.1_127186_128506_-	cd06173, MFS_MefA_like, Macrolide efflux protein A and similar proteins of the Major Facilitator Superfamily of transporters	NA|295aa|down_2|CP025571.1_128534_129419_+	PRK05377, PRK05377, fructose-1,6-bisphosphate aldolase; Reviewed	NA|205aa|down_3|CP025571.1_129497_130112_-	COG2197, CitB, Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|453aa|down_4|CP025571.1_130127_131486_-	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|259aa|down_5|CP025571.1_131422_132199_-	pfam01061, ABC2_membrane, ABC-2 type transporter	NA|328aa|down_6|CP025571.1_132195_133179_-	COG1131, CcmA, ABC-type multidrug transport system, ATPase component [Defense mechanisms]	NA|566aa|down_7|CP025571.1_133329_135027_+	pfam01268, FTHFS, Formate--tetrahydrofolate ligase	NA|132aa|down_8|CP025571.1_135056_135452_+	NA	NA|163aa|down_9|CP025571.1_135476_135965_-	NA
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	2	279029-279180	2	CRISPRCasFinder	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Type I-E	CGGATTACCCCCGCTCGCGCGGGGACGAC	29	0	0	NA	NA	I-E	2	2	TypeI-E	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA|60aa|up_8|CP025571.1_271305_271485_-,NA	NA|77aa|up_9|CP025571.1_270768_270999_-	PRK09582, chaB, putative cation transport regulator ChaB	NA|60aa|up_8|CP025571.1_271305_271485_-	NA	NA|364aa|up_7|CP025571.1_271459_272551_-	pfam03631, Virul_fac_BrkB, Virulence factor BrkB	NA|98aa|up_6|CP025571.1_272648_272942_-	pfam14019, DUF4235, Protein of unknown function (DUF4235)	NA|100aa|up_5|CP025571.1_272977_273277_-	TIGR02921, PEP_integral, PEP-CTERM family integral membrane protein	NA|133aa|up_4|CP025571.1_273344_273743_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|267aa|up_3|CP025571.1_273933_274734_+	cd05233, SDR_c, classical (c) SDRs	NA|394aa|up_2|CP025571.1_274844_276026_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|318aa|up_1|CP025571.1_276561_277515_+	PRK09632, PRK09632, ATP-dependent DNA ligase; Reviewed	NA|365aa|up_0|CP025571.1_277882_278977_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|down_0|CP025571.1_279235_279715_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|115aa|down_1|CP025571.1_279716_280061_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|96aa|down_2|CP025571.1_280114_280402_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|96aa|down_3|CP025571.1_285134_285422_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|332aa|down_4|CP025571.1_285418_286414_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|243aa|down_5|CP025571.1_286397_287126_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|262aa|down_6|CP025571.1_287134_287920_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|386aa|down_7|CP025571.1_287912_289070_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|179aa|down_8|CP025571.1_289071_289608_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|531aa|down_9|CP025571.1_289604_291197_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	3	280463-285125	3,1,1,2,3	CRISPRCasFinder,CRT,PILER-CR,PILER-CR,PILER-CR	no	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Type I-E	CGGATTACCCCCGCTCGCGCGGGGACGAC,CGGATTACCCCCGCTNGCGCGGGGACGAC,CGGATTACCCCCGCTCGCGCGGGGACGAC,CGGATTACCCCCGCTTGCGCGGGGACGAC,CGGATTACCCCCGCTTGCGCGGGGACGAC	29,29,29,29,29	0	0	NA	NA	I-E:I-E:I-E:I-E:I-E	76,76,72,72,72	76	TypeI-E	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA	NA|98aa|up_9|CP025571.1_272648_272942_-	pfam14019, DUF4235, Protein of unknown function (DUF4235)	NA|100aa|up_8|CP025571.1_272977_273277_-	TIGR02921, PEP_integral, PEP-CTERM family integral membrane protein	NA|133aa|up_7|CP025571.1_273344_273743_-	pfam07332, Phage_holin_3_6, Putative Actinobacterial Holin-X, holin superfamily III	NA|267aa|up_6|CP025571.1_273933_274734_+	cd05233, SDR_c, classical (c) SDRs	NA|394aa|up_5|CP025571.1_274844_276026_-	pfam07992, Pyr_redox_2, Pyridine nucleotide-disulphide oxidoreductase	NA|318aa|up_4|CP025571.1_276561_277515_+	PRK09632, PRK09632, ATP-dependent DNA ligase; Reviewed	NA|365aa|up_3|CP025571.1_277882_278977_-	pfam13358, DDE_3, DDE superfamily endonuclease	NA|160aa|up_2|CP025571.1_279235_279715_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|115aa|up_1|CP025571.1_279716_280061_-	PHA02517, PHA02517, putative transposase OrfB; Reviewed	NA|96aa|up_0|CP025571.1_280114_280402_-	COG2963, COG2963, Transposase and inactivated derivatives [DNA replication, recombination, and repair]	cas2|96aa|down_0|CP025571.1_285134_285422_-	pfam09707, Cas_Cas2CT1978, CRISPR-associated protein (Cas_Cas2CT1978)	cas1|332aa|down_1|CP025571.1_285418_286414_-	TIGR03638, cas1_ECOLI, CRISPR-associated endonuclease Cas1, subtype I-E/ECOLI	cas6e|243aa|down_2|CP025571.1_286397_287126_-	pfam08798, CRISPR_assoc, CRISPR associated protein	cas5|262aa|down_3|CP025571.1_287134_287920_-	pfam09704, Cas_Cas5d, CRISPR-associated protein (Cas_Cas5)	cas7|386aa|down_4|CP025571.1_287912_289070_-	pfam09344, Cas_CT1975, CT1975-like protein	cse2gr11|179aa|down_5|CP025571.1_289071_289608_-	pfam09485, CRISPR_Cse2, CRISPR-associated protein Cse2 (CRISPR_cse2)	cas8e|531aa|down_6|CP025571.1_289604_291197_-	pfam09481, CRISPR_Cse1, CRISPR-associated protein Cse1 (CRISPR_cse1)	cas3|910aa|down_7|CP025571.1_291365_294095_-	PRK09694, PRK09694, CRISPR-associated helicase/endonuclease Cas3	NA|464aa|down_8|CP025571.1_294355_295747_-	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|149aa|down_9|CP025571.1_296005_296452_+	cd17253, RMtype1_S_Eco933I-TRD2-CR2_like, Type I restriction-modification system specificity (S) subunit TRD-CR, similar to Escherichia coli O157:H7 EDL933 S subunit (S
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	4	489768-489845	4	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	CCCCGGAGTGGCTCAAGTGGCCCTGG	26	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA|163aa|down_8|CP025571.1_499324_499813_+	NA|321aa|up_9|CP025571.1_479203_480166_-	cd06193, siderophore_interacting, Siderophore interacting proteins share the domain structure of the ferredoxin reductase like family	NA|298aa|up_8|CP025571.1_480162_481056_-	COG1120, FepC, ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]	NA|315aa|up_7|CP025571.1_481052_481997_-	COG4779, FepG, ABC-type enterobactin transport system, permease component [Inorganic ion transport and metabolism]	NA|359aa|up_6|CP025571.1_482086_483163_-	pfam01032, FecCD, FecCD transport family	NA|349aa|up_5|CP025571.1_483159_484206_-	cd01146, FhuD, Fe3+-siderophore binding domain FhuD	NA|654aa|up_4|CP025571.1_484569_486531_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|580aa|up_3|CP025571.1_486527_488267_+	COG1132, MdlB, ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]	NA|57aa|up_2|CP025571.1_488340_488511_-	PRK01110, rpmF, 50S ribosomal protein L32; Validated	NA|57aa|up_1|CP025571.1_488819_488990_-	PRK00595, rpmG, 50S ribosomal protein L33; Validated	NA|82aa|up_0|CP025571.1_489273_489519_+	PRK01678, rpmE2, type B 50S ribosomal protein L31	NA|79aa|down_0|CP025571.1_489934_490171_-	PRK00359, rpmB, 50S ribosomal protein L28; Reviewed	NA|259aa|down_1|CP025571.1_490835_491612_-	PRK14241, PRK14241, phosphate transporter ATP-binding protein; Provisional	NA|340aa|down_2|CP025571.1_491658_492678_-	COG0581, PstA, ABC-type phosphate transport system, permease component [Inorganic ion transport and metabolism]	NA|348aa|down_3|CP025571.1_492674_493718_-	TIGR02138, phosphate_transport_system_permease_protein_PstC, phosphate ABC transporter, permease protein PstC	NA|386aa|down_4|CP025571.1_493852_495010_-	TIGR00975, precursor_PBP-3_PstS-3_Antigen_Ag88	NA|304aa|down_5|CP025571.1_495248_496160_-	cd03673, Ap6A_hydrolase, Diadenosine hexaphosphate (Ap6A) hydrolase is a member of the Nudix hydrolase superfamily	NA|716aa|down_6|CP025571.1_496156_498304_-	PRK05443, PRK05443, polyphosphate kinase; Provisional	NA|233aa|down_7|CP025571.1_498442_499141_-	COG0745, OmpR, Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [Signal transduction mechanisms / Transcription]	NA|163aa|down_8|CP025571.1_499324_499813_+	NA	NA|352aa|down_9|CP025571.1_499886_500942_-	COG2141, COG2141, Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases [Energy production and conversion]
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	5	595899-596001	5	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	GGCGGCGCGGTTCCAGAAGTCCGGTTACGGGGC	33	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA|148aa|down_9|CP025571.1_612568_613012_+	NA|218aa|up_9|CP025571.1_583164_583818_+	pfam05949, DUF881, Bacterial protein of unknown function (DUF881)	NA|213aa|up_8|CP025571.1_583944_584583_+	PRK07765, PRK07765, aminodeoxychorismate/anthranilate synthase component II	NA|601aa|up_7|CP025571.1_584678_586481_-	cd14014, STKc_PknB_like, Catalytic domain of bacterial Serine/Threonine kinases, PknB and similar proteins	NA|477aa|up_6|CP025571.1_586554_587985_-	TIGR03423, pbp2_mrdA, penicillin-binding protein 2	NA|508aa|up_5|CP025571.1_587981_589505_-	COG0772, FtsW, Bacterial cell division membrane protein [Cell division and chromosome partitioning]	NA|510aa|up_4|CP025571.1_589501_591031_-	COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms]	NA|166aa|up_3|CP025571.1_591033_591531_-	pfam00498, FHA, FHA domain	NA|233aa|up_2|CP025571.1_591533_592232_-	pfam12401, DUF3662, Protein of unknown function (DUF2662)	NA|512aa|up_1|CP025571.1_592458_593994_-	COG1091, RfbD, dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]	NA|333aa|up_0|CP025571.1_593990_594989_-	COG1088, RfbB, dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]	NA|567aa|down_0|CP025571.1_596250_597951_-	cd00085, HNHc, HNH nucleases; HNH endonuclease signature which is found in viral, prokaryotic, and eukaryotic proteins	NA|398aa|down_1|CP025571.1_598641_599835_-	pfam07510, DUF1524, Protein of unknown function (DUF1524)	NA|764aa|down_2|CP025571.1_600115_602407_-	pfam17389, Bac_rhamnosid6H, Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain	NA|313aa|down_3|CP025571.1_602494_603433_-	cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases	NA|519aa|down_4|CP025571.1_605272_606829_+	COG4932, COG4932, Predicted outer membrane protein [Cell envelope biogenesis, outer membrane]	NA|485aa|down_5|CP025571.1_606935_608390_+	pfam17802, SpaA, Prealbumin-like fold domain	NA|284aa|down_6|CP025571.1_608490_609342_+	cd05827, Sortase_C, Sortase domain found in class C sortases	NA|457aa|down_7|CP025571.1_609343_610714_-	TIGR03025, EPS_sugtrans, exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase	NA|381aa|down_8|CP025571.1_611278_612421_+	cd03801, GT4_PimA-like, phosphatidyl-myo-inositol mannosyltransferase	NA|148aa|down_9|CP025571.1_612568_613012_+	NA
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	6	880309-880440	6	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	TGAGATCTGCCACCTACAGGCCGGCGGCTGGATAGTGCGC	40	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA|270aa|up_2|CP025571.1_876688_877498_-,NA|287aa|down_5|CP025571.1_889256_890117_+	NA|346aa|up_9|CP025571.1_870557_871595_+	PRK05396, tdh, L-threonine 3-dehydrogenase; Validated	NA|410aa|up_8|CP025571.1_871660_872890_+	PRK06939, PRK06939, 2-amino-3-ketobutyrate coenzyme A ligase; Provisional	NA|129aa|up_7|CP025571.1_872886_873273_+	COG3189, COG3189, Uncharacterized conserved protein [Function unknown]	NA|282aa|up_6|CP025571.1_873365_874211_+	COG0586, DedA, Uncharacterized membrane-associated protein [Function unknown]	NA|173aa|up_5|CP025571.1_874276_874795_-	cd02908, Macro_OAADPr_deacetylase, macrodomain, O-acetyl-ADP-ribose (OAADPr) family	NA|314aa|up_4|CP025571.1_874914_875856_-	TIGR01496, Dihydropteroate_synthase, dihydropteroate synthase	NA|193aa|up_3|CP025571.1_875818_876397_-	pfam00300, His_Phos_1, Histidine phosphatase superfamily (branch 1)	NA|270aa|up_2|CP025571.1_876688_877498_-	NA	NA|237aa|up_1|CP025571.1_877553_878264_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|427aa|up_0|CP025571.1_878344_879625_+	COG4585, COG4585, Signal transduction histidine kinase [Signal transduction mechanisms]	NA|369aa|down_0|CP025571.1_880539_881646_+	PRK01209, cobD, cobalamin biosynthesis protein	NA|485aa|down_1|CP025571.1_881642_883097_+	PRK00784, PRK00784, cobyric acid synthase	NA|250aa|down_2|CP025571.1_883378_884128_+	cd11645, Precorrin_2_C20_MT, Precorrin-2 C20-methyltransferase, also named CobI or CbiL	NA|857aa|down_3|CP025571.1_885269_887840_+	cd11646, Precorrin_3B_C17_MT, Precorrin-3B C(17)-methyltransferase (also named CobJ or CbiH)	NA|456aa|down_4|CP025571.1_887842_889210_+	cd03414, CbiX_SirB_C, Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain	NA|287aa|down_5|CP025571.1_889256_890117_+	NA	NA|295aa|down_6|CP025571.1_890147_891032_+	pfam02517, Abi, CAAX protease self-immunity	NA|311aa|down_7|CP025571.1_891125_892058_+	TIGR04379, myo-inositol_catabolism_protein, myo-inosose-2 dehydratase	NA|336aa|down_8|CP025571.1_892102_893110_+	TIGR04380, hypothetical_protein_HOLDEFILI_04020, inositol 2-dehydrogenase	NA|289aa|down_9|CP025571.1_893225_894092_+	COG1082, IolE, Sugar phosphate isomerases/epimerases [Carbohydrate transport and metabolism]
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	7	1090507-1090582	7	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	TCGGCATCTTGGTCGAAAGTCACGG	25	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA|255aa|up_4|CP025571.1_1086279_1087044_-,NA|390aa|up_3|CP025571.1_1087040_1088210_-,NA|257aa|up_1|CP025571.1_1088904_1089675_-,NA|125aa|up_0|CP025571.1_1089661_1090036_+,NA|360aa|down_6|CP025571.1_1099638_1100718_+	NA|282aa|up_9|CP025571.1_1081274_1082120_-	COG1108, ZnuB, ABC-type Mn2+/Zn2+ transport systems, permease components [Inorganic ion transport and metabolism]	NA|290aa|up_8|CP025571.1_1082121_1082991_-	cd03235, ABC_Metallic_Cations, ATP-binding cassette domain of the metal-type transporters	NA|319aa|up_7|CP025571.1_1083090_1084047_-	cd01020, TroA_b, Metal binding protein TroA_b	NA|184aa|up_6|CP025571.1_1084210_1084762_-	pfam00857, Isochorismatase, Isochorismatase family	NA|487aa|up_5|CP025571.1_1084761_1086222_-	cd11484, SLC-NCS1sbd_CobB-like, nucleobase-cation-symport-1 (NCS1) transporter CobB-like; solute-binding domain	NA|255aa|up_4|CP025571.1_1086279_1087044_-	NA	NA|390aa|up_3|CP025571.1_1087040_1088210_-	NA	NA|238aa|up_2|CP025571.1_1088209_1088923_-	cd03268, ABC_BcrA_bacitracin_resist, ATP-binding cassette domain of the bacitracin-resistance transporter	NA|257aa|up_1|CP025571.1_1088904_1089675_-	NA	NA|125aa|up_0|CP025571.1_1089661_1090036_+	NA	NA|1188aa|down_0|CP025571.1_1090825_1094389_+	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA	NA|356aa|down_1|CP025571.1_1094392_1095460_-	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase	NA|567aa|down_2|CP025571.1_1095653_1097354_+	PRK14479, PRK14479, dihydroxyacetone kinase; Provisional	NA|168aa|down_3|CP025571.1_1097361_1097865_-	COG2236, COG2236, Predicted phosphoribosyltransferases [General function prediction only]	NA|277aa|down_4|CP025571.1_1097946_1098777_+	COG1349, GlpR, Transcriptional regulators of sugar metabolism [Transcription / Carbohydrate transport and metabolism]	NA|164aa|down_5|CP025571.1_1098929_1099421_+	pfam02502, LacAB_rpiB, Ribose/Galactose Isomerase	NA|360aa|down_6|CP025571.1_1099638_1100718_+	NA	NA|285aa|down_7|CP025571.1_1100763_1101618_+	cd07531, HAD_Pase_UmpH-like, UmpH/NagD family phosphatase, similar to Bacillus AraL phosphatase, a putative sugar phosphatase	NA|521aa|down_8|CP025571.1_1101713_1103276_+	cd07783, FGGY_CarbK-RPE_like, Carbohydrate kinase and ribulose-phosphate 3-epimerase fusion proteins-like; belongs to the FGGY family of carbohydrate kinases	NA|454aa|down_9|CP025571.1_1103449_1104811_+	cd08175, G1PDH, Glycerol-1-phosphate dehydrogenase (G1PDH) catalyzes the reversible reduction of dihydroxyacetone phosphate (DHAP) to glycerol-1-phosphate (G1P) in an NADH-dependent manner
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	8	1520543-1520648	8	CRISPRCasFinder	no	DinG	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Type IV-A	AACCCCGTGGCGACGGCCCTGCAG	24	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA|71aa|down_7|CP025571.1_1527882_1528095_+	NA|352aa|up_9|CP025571.1_1508827_1509883_+	PRK09354, recA, recombinase A; Provisional	NA|181aa|up_8|CP025571.1_1509879_1510422_+	PRK00117, recX, recombination regulator RecX; Reviewed	NA|495aa|up_7|CP025571.1_1510563_1512048_+	PRK12704, PRK12704, phosphodiesterase; Provisional	NA|303aa|up_6|CP025571.1_1512082_1512991_-	cd09022, Aldose_epim_Ec_YihR, Aldose 1-epimerase, similar to Escherichia coli YihR	NA|497aa|up_5|CP025571.1_1513084_1514575_+	PRK14326, PRK14326, (dimethylallyl)adenosine tRNA methylthiotransferase; Provisional	NA|67aa|up_4|CP025571.1_1514754_1514955_-	pfam14013, MT0933_antitox, MT0933-like antitoxin protein	NA|308aa|up_3|CP025571.1_1515095_1516019_+	PRK00091, miaA, tRNA delta(2)-isopentenylpyrophosphate transferase; Reviewed	NA|277aa|up_2|CP025571.1_1516101_1516932_+	PRK00450, dapF, diaminopimelate epimerase; Provisional	NA|494aa|up_1|CP025571.1_1517035_1518517_+	TIGR03156, GTP_HflX, GTP-binding protein HflX	DinG|669aa|up_0|CP025571.1_1518513_1520520_+	COG1199, DinG, Rad3-related DNA helicases [Transcription / DNA replication, recombination, and repair]	NA|96aa|down_0|CP025571.1_1520736_1521024_+	PRK07480, PRK07480, putative aminotransferase; Validated	NA|172aa|down_1|CP025571.1_1521154_1521670_+	PRK00464, nrdR, transcriptional repressor NrdR	NA|956aa|down_2|CP025571.1_1521811_1524679_+	PRK06556, PRK06556, vitamin B12-dependent ribonucleotide reductase; Validated	NA|194aa|down_3|CP025571.1_1524773_1525355_+	PRK00416, dcd, deoxycytidine triphosphate deaminase; Reviewed	NA|319aa|down_4|CP025571.1_1525411_1526368_+	cd17036, T3SC_YbjN-like_1, T110839 is structurally similar to type III secretion system chaperones and YbjN family proteins	NA|295aa|down_5|CP025571.1_1526483_1527368_+	pfam00582, Usp, Universal stress protein family	NA|135aa|down_6|CP025571.1_1527481_1527886_+	pfam08044, DUF1707, Domain of unknown function (DUF1707)	NA|71aa|down_7|CP025571.1_1527882_1528095_+	NA	NA|1338aa|down_8|CP025571.1_1528172_1532186_+	PRK11131, PRK11131, ATP-dependent RNA helicase HrpA; Provisional	NA|745aa|down_9|CP025571.1_1532298_1534533_+	TIGR02336, hypothetical_protein_BL1641, 1,3-beta-galactosyl-N-acetylhexosamine phosphorylase
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	10	2415715-2415839	10	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	CCGACCCAGTTTCTGGCAGAACTCGTTCAGGGG	33	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA	NA|511aa|up_9|CP025571.1_2404539_2406072_-	PRK05567, PRK05567, inosine 5'-monophosphate dehydrogenase; Reviewed	NA|511aa|up_8|CP025571.1_2406135_2407668_-	TIGR03459, crt_membr, carotene biosynthesis associated membrane protein	NA|532aa|up_7|CP025571.1_2407789_2409385_-	PRK00013, groEL, chaperonin GroEL; Reviewed	NA|99aa|up_6|CP025571.1_2409397_2409694_-	PRK00364, groES, co-chaperonin GroES; Reviewed	NA|245aa|up_5|CP025571.1_2409875_2410610_+	pfam04402, SIMPL, Protein of unknown function (DUF541)	NA|400aa|up_4|CP025571.1_2410725_2411925_-	pfam18096, Thump_like, THUMP domain-like	NA|162aa|up_3|CP025571.1_2411947_2412433_-	cd03427, MTH1, MutT homolog-1 (MTH1) is a member of the Nudix hydrolase superfamily	NA|281aa|up_2|CP025571.1_2412783_2413626_+	TIGR04336, hypothetical_protein, AmmeMemoRadiSam system protein B	NA|201aa|up_1|CP025571.1_2413622_2414225_+	TIGR04335, AMMECR1_domain_protein, AmmeMemoRadiSam system protein A	NA|377aa|up_0|CP025571.1_2414221_2415352_+	TIGR04337, Radical_SAM, AmmeMemoRadiSam system radical SAM enzyme	NA|444aa|down_0|CP025571.1_2415973_2417305_-	cd00585, Peptidase_C1B, Peptidase C1B subfamily (MEROPS database nomenclature); composed of eukaryotic bleomycin hydrolases (BH) and bacterial aminopeptidases C (pepC)	NA|373aa|down_1|CP025571.1_2417427_2418546_-	PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated	NA|348aa|down_2|CP025571.1_2418753_2419797_-	PRK09604, PRK09604, tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	NA|211aa|down_3|CP025571.1_2419789_2420422_-	TIGR01575, rimI, ribosomal-protein-alanine acetyltransferase	NA|244aa|down_4|CP025571.1_2420422_2421154_-	TIGR03725, T6A_YeaZ, tRNA threonylcarbamoyl adenosine modification protein YeaZ	NA|319aa|down_5|CP025571.1_2421153_2422110_-	pfam02367, TsaE, Threonylcarbamoyl adenosine biosynthesis protein TsaE	NA|493aa|down_6|CP025571.1_2422172_2423651_-	COG0513, SrmB, Superfamily II DNA and RNA helicases [DNA replication, recombination, and repair / Transcription / Translation, ribosomal structure and biogenesis]	NA|384aa|down_7|CP025571.1_2425047_2426199_+	cd03814, GT4-like, glycosyltransferase family 4 proteins	NA|491aa|down_8|CP025571.1_2426233_2427706_-	cd01171, YXKO-related, B	NA|722aa|down_9|CP025571.1_2427997_2430163_+	COG3345, GalA, Alpha-galactosidase [Carbohydrate transport and metabolism]
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	12	2882119-2882203	12	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	CCCGGGGACCGCCGCCCCTGCCGAT	25	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA	NA|290aa|up_9|CP025571.1_2870012_2870882_-	PRK00281, PRK00281, undecaprenyl-diphosphate phosphatase	NA|149aa|up_8|CP025571.1_2871290_2871737_-	PRK00137, rplI, 50S ribosomal protein L9; Reviewed	NA|80aa|up_7|CP025571.1_2871751_2871991_-	PRK00391, rpsR, 30S ribosomal protein S18; Reviewed	NA|218aa|up_6|CP025571.1_2872132_2872786_-	PRK07772, PRK07772, single-stranded DNA-binding protein; Provisional	NA|97aa|up_5|CP025571.1_2872931_2873222_-	PRK00453, rpsF, 30S ribosomal protein S6; Reviewed	NA|429aa|up_4|CP025571.1_2873937_2875224_-	TIGR01412, Probable_deferrochelatase/peroxidase_EfeN, Tat-translocated enzyme	NA|432aa|up_3|CP025571.1_2875462_2876758_-	cd14656, Imelysin-like_EfeO, EfeO is a component of the EfeUOB operon	NA|340aa|up_2|CP025571.1_2876898_2877918_-	TIGR00145, Uncharacterized_protein_slr0964, FTR1 family protein	NA|127aa|up_1|CP025571.1_2879367_2879748_-	cd00158, RHOD, Rhodanese Homology Domain (RHOD); an alpha beta fold domain found duplicated in the rhodanese protein	NA|732aa|up_0|CP025571.1_2879840_2882036_-	COG1022, FAA1, Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]	NA|266aa|down_0|CP025571.1_2882217_2883015_-	PRK01060, PRK01060, endonuclease IV; Provisional	NA|281aa|down_1|CP025571.1_2883126_2883969_+	COG0300, DltE, Short-chain dehydrogenases of various substrate specificities [General function prediction only]	NA|288aa|down_2|CP025571.1_2883971_2884835_+	cd07989, LPLAT_AGPAT-like, Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like	NA|161aa|down_3|CP025571.1_2884878_2885361_+	smart00871, AraC_E_bind, Bacterial transcription activator, effector binding domain	NA|395aa|down_4|CP025571.1_2885480_2886665_+	pfam02388, FemAB, FemAB family	NA|348aa|down_5|CP025571.1_2886661_2887705_+	cd00430, PLPDE_III_AR, Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Alanine Racemase	NA|408aa|down_6|CP025571.1_2887948_2889172_+	PRK09754, PRK09754, phenylpropionate dioxygenase ferredoxin reductase subunit; Provisional	NA|146aa|down_7|CP025571.1_2889240_2889678_+	pfam13811, DUF4186, Domain of unknown function (DUF4186)	NA|418aa|down_8|CP025571.1_2890070_2891324_+	PRK07777, PRK07777, putative succinyldiaminopimelate transaminase DapC	NA|466aa|down_9|CP025571.1_2891472_2892870_+	TIGR00387, Glycolate_oxidase_subunit_glcD
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	13	2968285-2968380	13	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	TTCCGCGAGTGAAATGTTCACCC	23	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA|197aa|up_6|CP025571.1_2959494_2960085_-,NA|72aa|up_2|CP025571.1_2964938_2965154_-,NA	NA|397aa|up_9|CP025571.1_2955177_2956368_+	COG3842, PotA, ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]	NA|468aa|up_8|CP025571.1_2956644_2958048_+	cd17345, MFS_GlpT, Glycerol-3-Phosphate Transporter of the Major Facilitator Superfamily of transporters	NA|255aa|up_7|CP025571.1_2958231_2958996_+	pfam02586, SRAP, SOS response associated peptidase (SRAP)	NA|197aa|up_6|CP025571.1_2959494_2960085_-	NA	NA|486aa|up_5|CP025571.1_2960274_2961732_+	pfam17964, Big_10, Bacterial Ig domain	NA|401aa|up_4|CP025571.1_2961817_2963020_+	COG0797, RlpA, Lipoproteins [Cell envelope biogenesis, outer membrane]	NA|461aa|up_3|CP025571.1_2963349_2964732_+	pfam13701, DDE_Tnp_1_4, Transposase DDE domain group 1	NA|72aa|up_2|CP025571.1_2964938_2965154_-	NA	NA|428aa|up_1|CP025571.1_2965131_2966415_+	cd06114, EcCS_like, Escherichia coli (Ec) citrate synthase (CS) GltA_like	NA|357aa|up_0|CP025571.1_2967011_2968082_+	PRK09358, PRK09358, adenosine deaminase; Provisional	NA|310aa|down_0|CP025571.1_2968389_2969319_-	pfam18164, GNAT_C, GNAT-like C-terminal domain	NA|442aa|down_1|CP025571.1_2969336_2970662_-	smart00812, Alpha_L_fucos, Alpha-L-fucosidase	NA|216aa|down_2|CP025571.1_2970949_2971597_-	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|455aa|down_3|CP025571.1_2971937_2973302_-	PRK05313, PRK05313, hypothetical protein; Provisional	NA|90aa|down_4|CP025571.1_2973321_2973591_-	PRK00194, PRK00194, ACT domain-containing protein	NA|176aa|down_5|CP025571.1_2973944_2974472_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|366aa|down_6|CP025571.1_2974492_2975590_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|376aa|down_7|CP025571.1_2975865_2976993_+	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	NA|655aa|down_8|CP025571.1_2977449_2979414_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|291aa|down_9|CP025571.1_2979457_2980330_+	pfam00924, MS_channel, Mechanosensitive ion channel
GCA_004011075.1_ASM401107v1	CP025571	Acidipropionibacterium jensenii strain JS279 chromosome, complete genome	14	2981844-2981968	14	CRISPRCasFinder	no		cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	Orphan	GGATTATCCACACGCCGGCCCACAGATGGCAGA	33	0	0	NA	NA	NA	1	1	Orphan	cas2,cas1,cas6e,cas5,cas7,cse2gr11,cas8e,cas3,DEDDh,csa3,DinG,WYL	NA,NA|725aa|down_2|CP025571.1_2985317_2987492_+,NA|96aa|down_5|CP025571.1_2990713_2991001_+	NA|442aa|up_9|CP025571.1_2969336_2970662_-	smart00812, Alpha_L_fucos, Alpha-L-fucosidase	NA|216aa|up_8|CP025571.1_2970949_2971597_-	COG2085, COG2085, Predicted dinucleotide-binding enzymes [General function prediction only]	NA|455aa|up_7|CP025571.1_2971937_2973302_-	PRK05313, PRK05313, hypothetical protein; Provisional	NA|90aa|up_6|CP025571.1_2973321_2973591_-	PRK00194, PRK00194, ACT domain-containing protein	NA|176aa|up_5|CP025571.1_2973944_2974472_-	COG1670, RimL, Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]	NA|366aa|up_4|CP025571.1_2974492_2975590_-	PRK05441, murQ, N-acetylmuramic acid-6-phosphate etherase; Reviewed	NA|376aa|up_3|CP025571.1_2975865_2976993_+	COG2971, COG2971, Predicted N-acetylglucosamine kinase [Carbohydrate transport and metabolism]	NA|655aa|up_2|CP025571.1_2977449_2979414_+	COG0768, FtsI, Cell division protein FtsI/penicillin-binding protein 2 [Cell envelope biogenesis, outer membrane]	NA|291aa|up_1|CP025571.1_2979457_2980330_+	pfam00924, MS_channel, Mechanosensitive ion channel	NA|380aa|up_0|CP025571.1_2980510_2981650_-	pfam02595, Gly_kinase, Glycerate kinase family	NA|516aa|down_0|CP025571.1_2982027_2983575_+	TIGR02692, putative_tRNA_nucleotidyltransferase, tRNA adenylyltransferase	NA|508aa|down_1|CP025571.1_2983544_2985068_+	cd02549, Peptidase_C39A, A sub-family of peptidase family C39	NA|725aa|down_2|CP025571.1_2985317_2987492_+	NA	NA|722aa|down_3|CP025571.1_2987667_2989833_+	cd13973, PK_MviN-like, Pseudokinase domain of the peptidoglycan biosynthetic protein MviN	NA|185aa|down_4|CP025571.1_2989940_2990495_+	PRK09643, PRK09643, RNA polymerase sigma factor SigM; Reviewed	NA|96aa|down_5|CP025571.1_2990713_2991001_+	NA	NA|510aa|down_6|CP025571.1_2991342_2992872_-	PRK00047, glpK, glycerol kinase GlpK	NA|251aa|down_7|CP025571.1_2993313_2994066_-	COG0580, GlpF, Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family) [Carbohydrate transport and metabolism]	NA|317aa|down_8|CP025571.1_2994249_2995200_+	COG2390, DeoR, Transcriptional regulator, contains sigma factor-related N-terminal domain [Transcription]	NA|374aa|down_9|CP025571.1_2995297_2996419_-	TIGR02037, Probable_periplasmic_serine_protease_do/HhoA-like, periplasmic serine protease, Do/DeqQ family
