The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	0	122073	4105338	transposase,tRNA,protease	Planktothrix_phage(16.67%)	110	NA	NA
AZX38185.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZX38186.1|1916_2609_+	ribosomal RNA small subunit methyltransferase G	NA	NA	NA	NA	NA
AZX38187.1|2605_3403_+	ParA family protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZX38188.1|3409_4171_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX38189.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZX38190.1|6721_7912_+	elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZX38191.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZX38192.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZX38193.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZX38194.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZX38195.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZX38196.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZX38197.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZX38198.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZX41570.1|20126_20531_-	lipoprotein	NA	NA	NA	NA	NA
AZX38199.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38200.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZX38201.1|26470_27286_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX38202.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38203.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AZX38204.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38205.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AZX38206.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZX41571.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38207.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX38208.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX38209.1|34625_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38210.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
AZX38211.1|36949_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZX38212.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZX38213.1|40060_40600_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZX38214.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX38215.1|41318_42212_+	M48 family peptidase	NA	NA	NA	NA	NA
AZX38216.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZX38217.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZX38218.1|43346_43646_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZX38219.1|43663_44614_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38220.1|45113_45749_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38221.1|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZX38222.1|46084_46978_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38223.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZX38224.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZX38225.1|50141_51092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38226.1|51134_52391_+	MFS transporter	NA	NA	NA	NA	NA
AZX38227.1|53622_54357_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZX38228.1|54362_54953_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZX38229.1|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX38230.1|55663_56425_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX38231.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX38232.1|57497_58448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38233.1|59248_60475_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX38234.1|60474_60894_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX38235.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38236.1|62442_63279_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38237.1|63473_64055_-|protease	protease	protease	NA	NA	NA	NA
AZX38238.1|64067_64385_-	ferredoxin	NA	NA	NA	NA	NA
AZX38239.1|64488_65547_-	oxidoreductase	NA	NA	NA	NA	NA
AZX38240.1|65581_66853_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZX38241.1|67482_68664_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38242.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38243.1|70129_70444_+|transposase	transposase	transposase	NA	NA	NA	NA
AZX38244.1|71636_73544_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZX38245.1|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX38246.1|74357_74939_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZX38247.1|75027_75279_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41572.1|75280_76030_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38248.1|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZX38249.1|77634_78585_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41573.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38250.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZX38251.1|82822_83527_-	DUF2837 domain-containing protein	NA	NA	NA	NA	NA
AZX38252.1|83523_84630_-	glycosyltransferase family 4 protein	NA	NA	NA	NA	NA
AZX38253.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
AZX38254.1|85481_86714_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZX38255.1|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZX38256.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZX38257.1|89110_90211_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZX38258.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX38259.1|90793_91846_-	gfo/Idh/MocA family oxidoreductase	NA	NA	NA	NA	NA
AZX41574.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZX38260.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZX38261.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38262.1|94468_95272_-	type III pantothenate kinase	NA	NA	NA	NA	NA
AZX38263.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZX38264.1|96203_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX38265.1|97339_98179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZX38266.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38267.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX38268.1|100529_101786_+	D-alanyl-D-alanine carboxypeptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	6.2e-66
AZX38269.1|101788_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZX38270.1|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZX38271.1|103091_103754_+	octanoyltransferase	NA	NA	NA	NA	NA
AZX38272.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
AZX38273.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZX38274.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZX38275.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZX38276.1|107427_108378_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38277.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX38278.1|110552_111182_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZX38279.1|111243_111927_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZX38280.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX41575.1|113906_114254_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZX38281.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41576.1|114944_115961_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX38282.1|116036_116837_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX38283.1|116833_117709_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX38284.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX38285.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZX38286.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
AZX38287.1|121122_122073_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	164893	225404	4105338	transposase,tRNA,protease	Diachasmimorpha_longicaudata_entomopoxvirus(11.11%)	51	NA	NA
AZX38319.1|164893_165844_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38320.1|167287_168190_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38321.1|168167_168797_-	LemA family protein	NA	NA	NA	NA	NA
AZX38322.1|169127_170510_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZX38323.1|170543_171173_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZX38324.1|171221_172829_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZX38325.1|172853_173537_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41581.1|173618_174095_-	bacterioferritin	NA	NA	NA	NA	NA
AZX38326.1|174301_175252_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38327.1|176367_176895_+	lipoprotein	NA	NA	NA	NA	NA
AZX38328.1|176986_177802_+	lipoprotein	NA	NA	NA	NA	NA
AZX38329.1|177862_178597_+	sulfurtransferase	NA	NA	NA	NA	NA
AZX38330.1|178634_180713_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZX38331.1|180962_181235_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38332.1|181333_182422_+	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX38333.1|182425_184330_+	outer membrane protein assembly factor	NA	NA	NA	NA	NA
AZX38334.1|184326_188001_+	DUF490 domain-containing protein	NA	NA	NA	NA	NA
AZX38335.1|188061_188625_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZX38336.1|188632_189055_-	glyoxalase	NA	NA	NA	NA	NA
AZX38337.1|189082_189502_-	glyoxalase/bleomycin resistance/dioxygenase family protein	NA	NA	NA	NA	NA
AZX41582.1|189530_189977_-	N-acetyltransferase	NA	Q9AZG4	Lactococcus_phage	29.4	1.2e-08
AZX38338.1|190103_190601_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38339.1|190755_193026_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZX38340.1|193074_194307_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX38341.1|194405_195356_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38342.1|195401_196094_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.4e-83
AZX38343.1|196090_196984_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX38344.1|197378_198479_+	aminomethyltransferase	NA	NA	NA	NA	NA
AZX38345.1|198560_198935_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZX38346.1|198994_201859_+	glycine dehydrogenase	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZX38347.1|202003_202744_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38348.1|202813_204025_+	CoA transferase	NA	NA	NA	NA	NA
AZX38349.1|204053_205022_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38350.1|205635_206586_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38351.1|206742_207066_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZX38352.1|207170_208220_-	cyclase	NA	NA	NA	NA	NA
AZX38353.1|208216_209041_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZX38354.1|209041_209338_-	YciI family protein	NA	NA	NA	NA	NA
AZX38355.1|209363_209639_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZX38356.1|209695_210340_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX38357.1|210339_211026_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX41583.1|211155_212007_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38358.1|212057_212783_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX38359.1|212814_214164_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZX38360.1|214275_215208_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX38361.1|215665_218461_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZX38362.1|219054_221997_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZX38363.1|222068_222788_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZX38364.1|222826_223375_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZX38365.1|223529_224429_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZX38366.1|224453_225404_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	233336	286924	4105338	transposase,tRNA,protease	Bacillus_phage(25.0%)	48	NA	NA
AZX38374.1|233336_234287_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38375.1|234373_235324_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38376.1|235320_236271_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38377.1|236369_237167_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX38378.1|238116_238527_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZX38379.1|239548_240292_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38380.1|240335_241379_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX38381.1|241549_243652_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38382.1|245062_246019_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38383.1|246037_246529_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZX38384.1|246525_247881_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZX38385.1|247881_248580_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZX38386.1|248576_249278_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZX38387.1|249530_250580_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZX38388.1|250685_251627_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZX38389.1|251623_253513_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZX38390.1|253599_254238_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41584.1|254380_255625_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZX38391.1|255696_256233_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZX38392.1|256384_257776_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZX38393.1|257792_258773_-	AEC family transporter	NA	NA	NA	NA	NA
AZX38394.1|258908_259892_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZX38395.1|259956_260856_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38396.1|260962_262717_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX38397.1|262724_263849_-	CoA transferase	NA	NA	NA	NA	NA
AZX38398.1|263862_264843_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38399.1|265573_266524_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38400.1|267083_267629_+	GbsR/MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38401.1|267712_269332_+	cytochrome d ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZX38402.1|269347_270502_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZX38403.1|270515_270641_+	cytochrome bd-I oxidase subunit CydX	NA	NA	NA	NA	NA
AZX38404.1|270637_272389_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZX38405.1|272385_274065_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZX38406.1|274100_274676_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.4e-28
AZX38407.1|275818_276097_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX38408.1|277140_278091_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38409.1|278077_278293_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38410.1|278368_278530_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZX38411.1|278537_278678_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38412.1|279196_279646_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZX38413.1|279655_280267_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX38414.1|280425_281280_-	cytochrome c1	NA	NA	NA	NA	NA
AZX38415.1|281299_282682_-	cytochrome b	NA	NA	NA	NA	NA
AZX41585.1|282746_283388_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZX38416.1|283527_283986_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZX38417.1|284010_284787_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZX41586.1|284840_285977_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZX38418.1|285973_286924_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	390857	448366	4105338	transposase	Orpheovirus(14.29%)	50	NA	NA
AZX38517.1|390857_391808_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38518.1|391944_392862_+	reductase	NA	NA	NA	NA	NA
AZX38519.1|392858_393107_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AZX38520.1|393103_394309_+	CoA transferase	NA	NA	NA	NA	NA
AZX38521.1|394381_395377_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38522.1|395399_396620_-	CoA transferase	NA	NA	NA	NA	NA
AZX38523.1|396616_397261_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38524.1|398991_399801_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41592.1|400018_401059_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AZX38525.1|401157_402141_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38526.1|402067_402769_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38527.1|402817_403588_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX38528.1|403584_404826_-	CoA transferase	NA	NA	NA	NA	NA
AZX38529.1|404930_406637_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX38530.1|406633_407530_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38531.1|407570_409160_-	sulfurtransferase	NA	NA	NA	NA	NA
AZX38532.1|409209_410202_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38533.1|410270_410870_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41593.1|411330_412308_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38534.1|412386_413337_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38535.1|413425_414340_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX38536.1|414336_414996_+	LysE family translocator	NA	NA	NA	NA	NA
AZX38537.1|415085_416009_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZX38538.1|416014_416470_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38539.1|416466_417570_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AZX41594.1|417489_417798_+	GtrA family protein	NA	NA	NA	NA	NA
AZX38540.1|417757_419377_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA	NA
AZX38541.1|419373_420432_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AZX38542.1|420561_421056_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX38543.1|421148_422126_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38544.1|422321_423527_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZX38545.1|423523_425035_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX41595.1|425050_426364_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
AZX38546.1|426554_426734_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38547.1|427143_427878_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZX38548.1|430322_431273_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38549.1|431404_431803_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AZX38550.1|432213_432684_-	universal stress protein	NA	NA	NA	NA	NA
AZX38551.1|432772_433117_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
AZX38552.1|433216_434617_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX38553.1|436405_436924_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AZX38554.1|437034_437790_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AZX38555.1|437985_439218_+	CoA transferase	NA	NA	NA	NA	NA
AZX38556.1|439210_439996_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX38557.1|440062_441034_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38558.1|441044_442022_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38559.1|442147_443320_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX38560.1|443346_444375_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX38561.1|444440_445634_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX38562.1|447415_448366_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	620802	721266	4105338	transposase,tRNA,terminase,tail	uncultured_Caudovirales_phage(13.79%)	111	NA	NA
AZX38714.1|620802_621753_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38715.1|622451_622835_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38716.1|622892_623495_+	DUF2946 domain-containing protein	NA	NA	NA	NA	NA
AZX41601.1|623512_623914_-	DoxX family protein	NA	NA	NA	NA	NA
AZX41602.1|624047_624941_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38717.1|624937_625519_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AZX38718.1|626313_627048_+	arginyltransferase	NA	NA	NA	NA	NA
AZX38719.1|627088_628138_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AZX38720.1|628285_628864_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AZX38721.1|629250_630228_+	tripartite tricarboxylate transporter substrate binding protein BugD	NA	NA	NA	NA	NA
AZX38722.1|630321_634716_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AZX38723.1|634916_635765_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38724.1|635923_636736_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AZX38725.1|636791_637742_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38726.1|637840_638641_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38727.1|638702_639086_+	thioredoxin	NA	NA	NA	NA	NA
AZX38728.1|639097_640531_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZX38729.1|640737_641067_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZX41603.1|641069_641738_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX38730.1|642001_642922_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZX38731.1|642968_643181_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZX38732.1|643203_643626_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZX38733.1|643642_644743_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX38734.1|644839_646357_-	peptidase	NA	NA	NA	NA	NA
AZX38735.1|646432_647272_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZX38736.1|647293_648175_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZX38737.1|648256_649351_-	porin	NA	NA	NA	NA	NA
AZX38738.1|649644_650595_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41604.1|650669_651611_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38739.1|651694_652054_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38740.1|652435_653473_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38741.1|653789_655130_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AZX38742.1|655139_655592_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38743.1|655688_656870_+	monooxygenase	NA	NA	NA	NA	NA
AZX38744.1|656929_657961_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZX38745.1|658001_658241_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX38746.1|658310_659900_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZX38747.1|659899_660448_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZX38748.1|660528_661101_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZX38749.1|661119_662031_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZX38750.1|662104_663073_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZX38751.1|663195_664269_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZX38752.1|664273_666094_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZX38753.1|666170_667121_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38754.1|667209_667545_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZX38755.1|667678_668329_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZX38756.1|668350_669769_-	amidase	NA	NA	NA	NA	NA
AZX38757.1|669838_670594_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41605.1|670562_671321_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX38758.1|671331_672213_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX38759.1|672229_672937_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZX38760.1|672939_673698_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZX38761.1|673907_675650_+	sulfite reductase	NA	NA	NA	NA	NA
AZX38762.1|675642_676167_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZX38763.1|676206_677001_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX38764.1|677168_678242_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38765.1|678340_679291_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38766.1|679542_679755_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41606.1|679820_680432_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZX38767.1|680911_681232_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38768.1|681224_681923_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38769.1|681937_682159_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38770.1|682176_683127_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41607.1|683802_684252_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZX38771.1|684238_685516_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZX38772.1|685518_686937_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZX41608.1|686965_688021_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZX38773.1|688026_688269_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZX38774.1|688391_688994_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZX38775.1|689422_690373_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38776.1|690390_691038_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZX38777.1|691047_691299_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38778.1|691361_691844_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZX38779.1|691845_692046_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38780.1|692045_692441_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZX38781.1|692437_692836_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZX38782.1|692832_693255_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38783.1|693262_693763_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZX38784.1|694017_694536_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZX38785.1|694545_694875_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZX38786.1|694892_695183_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZX38787.1|695208_697821_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZX38788.1|697830_698190_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38789.1|698257_698791_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZX38790.1|698787_699177_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZX38791.1|699169_703126_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZX38792.1|703130_703547_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38793.1|703765_704029_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZX38794.1|704028_704841_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38795.1|704845_705088_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38796.1|705066_705618_+	lysozyme	NA	NA	NA	NA	NA
AZX38797.1|705599_706133_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZX38798.1|706129_706411_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38799.1|706753_706954_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38800.1|706960_707632_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZX38801.1|707987_708674_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX38802.1|708654_709227_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZX38803.1|709292_711023_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZX38804.1|711075_711504_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZX38805.1|711506_712187_+	protein TolQ	NA	NA	NA	NA	NA
AZX38806.1|712186_712645_+	protein TolR	NA	NA	NA	NA	NA
AZX38807.1|712681_713656_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZX38808.1|713672_714989_+	protein TolB	NA	NA	NA	NA	NA
AZX38809.1|715020_715518_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZX38810.1|715604_716294_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZX38811.1|716293_717343_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX38812.1|717339_718134_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZX38813.1|718302_718653_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38814.1|718628_719186_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38815.1|720110_720329_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38816.1|720315_721266_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	748191	821353	4105338	transposase	Streptococcus_phage(16.67%)	58	NA	NA
AZX38837.1|748191_749142_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38838.1|749796_750894_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZX38839.1|750927_752193_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZX38840.1|752350_753301_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38841.1|753544_754135_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZX41610.1|754150_756595_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX38842.1|756714_757686_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38843.1|757817_758342_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZX38844.1|758301_759252_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38845.1|759473_761669_-	DNA methylase	NA	NA	NA	NA	NA
AZX38846.1|761741_762149_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX38847.1|762271_763222_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38848.1|763337_763781_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX38849.1|763843_764638_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX38850.1|764803_765940_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AZX38851.1|766010_767144_-	GTPase ObgE	NA	NA	NA	NA	NA
AZX38852.1|767293_767554_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZX38853.1|767587_767899_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZX38854.1|768323_769472_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZX38855.1|769586_770552_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AZX38856.1|770820_771687_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38857.1|771817_773866_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX38858.1|773883_775881_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX38859.1|775915_777253_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZX38860.1|777515_779369_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38861.1|779423_780905_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX38862.1|780920_781508_-	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA	NA
AZX41611.1|781590_781770_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38863.1|781956_787077_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
AZX38864.1|787154_789293_+	cyclolysin secretion/processing ATP-binding protein CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
AZX38865.1|789289_790612_+	protein CyaD	NA	NA	NA	NA	NA
AZX38866.1|790613_792038_+	protein CyaE	NA	NA	NA	NA	NA
AZX38867.1|792128_793037_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38868.1|793101_794016_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX38869.1|794853_795537_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX38870.1|795553_796297_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
AZX38871.1|796326_797187_+	aminotransferase	NA	NA	NA	NA	NA
AZX38872.1|797194_797761_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38873.1|797849_798806_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38874.1|798850_799603_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX38875.1|799599_801345_-	acetolactate synthase catalytic subunit	NA	NA	NA	NA	NA
AZX38876.1|801429_802164_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38877.1|802480_803503_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AZX38878.1|803518_804241_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38879.1|804385_805393_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
AZX38880.1|805433_806966_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA	NA
AZX38881.1|806962_808081_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZX38882.1|808077_808860_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX38883.1|808871_809735_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
AZX41612.1|809753_810851_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38884.1|810919_811846_-	VOC family protein	NA	NA	NA	NA	NA
AZX38885.1|811880_813575_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZX38886.1|813774_814710_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZX38887.1|814815_815766_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38888.1|815864_816521_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX38889.1|816668_819377_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
AZX38890.1|819386_820406_+	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
AZX38891.1|820402_821353_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	854100	903364	4105338	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
AZX38920.1|854100_855051_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41613.1|855023_855623_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38921.1|855624_856059_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX38922.1|856055_856490_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38923.1|856473_857277_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZX38924.1|857293_858109_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AZX38925.1|858105_858921_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AZX38926.1|859067_859769_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38927.1|859796_861755_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZX38928.1|861837_862788_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38929.1|863008_863677_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX38930.1|863800_864907_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX38931.1|864919_868033_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AZX38932.1|868029_869523_+	RND transporter	NA	NA	NA	NA	NA
AZX38933.1|869537_870209_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX38934.1|870252_870747_-	azurin	NA	NA	NA	NA	NA
AZX38935.1|870887_871535_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX41614.1|871638_873687_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZX38936.1|873683_875696_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZX38937.1|875721_877056_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX41615.1|877164_878157_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38938.1|878223_880308_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AZX38939.1|880332_881304_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38940.1|881432_882434_-	peptidase M14	NA	NA	NA	NA	NA
AZX38941.1|882467_883709_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZX38942.1|883789_884713_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
AZX38943.1|884790_885615_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX41616.1|885811_886828_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX38944.1|887024_888008_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38945.1|889606_890995_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX38946.1|891025_892015_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX38947.1|892125_893358_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX38948.1|893639_894440_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38949.1|894462_896694_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZX38950.1|897481_897928_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZX38951.1|897949_898696_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZX38952.1|898839_899817_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZX38953.1|900450_901062_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZX38954.1|901055_902273_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZX38955.1|902413_903364_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	912976	977916	4105338	transposase	Bacillus_phage(18.18%)	60	NA	NA
AZX38964.1|912976_913927_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38965.1|913923_915774_-	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	26.4	1.3e-27
AZX38966.1|916154_916814_+	thiopurine S-methyltransferase	NA	NA	NA	NA	NA
AZX38967.1|916901_917054_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38968.1|917162_917330_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38969.1|917341_918022_-	DUF3313 domain-containing protein	NA	NA	NA	NA	NA
AZX38970.1|918303_919020_+	flagellar brake protein	NA	NA	NA	NA	NA
AZX38971.1|919034_920336_-	phospholipase	NA	NA	NA	NA	NA
AZX38972.1|922480_925369_+	metal-dependent phosphohydrolase	NA	NA	NA	NA	NA
AZX38973.1|925592_926945_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX38974.1|926973_927495_+	acetyl-CoA carboxylase biotin carboxyl carrier protein	NA	NA	NA	NA	NA
AZX38975.1|927491_928946_+	carboxylase	NA	NA	NA	NA	NA
AZX38976.1|928980_929229_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38977.1|929334_930210_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38978.1|930235_931291_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38979.1|931303_932095_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX38980.1|932127_933498_+	acetyl-CoA carboxylase biotin carboxylase subunit	NA	NA	NA	NA	NA
AZX38981.1|934674_935625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38982.1|935677_935899_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38983.1|936058_936271_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38984.1|936390_937509_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZX38985.1|937605_937821_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38986.1|938014_938266_+	hypothetical protein	NA	NA	NA	NA	NA
AZX38987.1|938378_939329_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38988.1|939325_939709_-	ferredoxin	NA	NA	NA	NA	NA
AZX38989.1|939763_941581_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZX41618.1|941727_942555_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZX38990.1|942600_943581_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZX38991.1|943577_943790_-	hypothetical protein	NA	NA	NA	NA	NA
AZX38992.1|943786_944968_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AZX38993.1|945131_945866_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZX38994.1|945867_948480_-	penicillin-binding protein	NA	NA	NA	NA	NA
AZX38995.1|948615_950529_-	S9 family peptidase	NA	NA	NA	NA	NA
AZX38996.1|951144_951555_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX38997.1|951652_952738_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZX38998.1|952836_953787_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX38999.1|953783_954758_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39000.1|954882_955794_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZX41619.1|956070_956463_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZX39001.1|956592_957543_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39002.1|957572_957755_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZX39003.1|957793_958051_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39004.1|958527_959709_-	MFS transporter	NA	NA	NA	NA	NA
AZX39005.1|959924_960602_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX39006.1|960598_961372_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZX39007.1|961449_962031_-	OmpA family protein	NA	NA	NA	NA	NA
AZX39008.1|962401_965083_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZX39009.1|965082_966216_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZX39010.1|966208_967294_+	prephenate dehydratase	NA	NA	NA	NA	NA
AZX39011.1|967380_968280_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZX39012.1|968276_969605_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZX39013.1|969619_970291_+	cytidylate kinase	NA	NA	NA	NA	NA
AZX39014.1|970463_972194_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZX39015.1|972195_972555_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZX39016.1|972746_973061_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZX39017.1|973103_974324_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZX39018.1|974320_975262_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZX39019.1|975258_976248_+	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZX39020.1|976282_976867_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZX39021.1|976965_977916_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	997316	1060467	4105338	transposase	Enterococcus_phage(16.67%)	53	NA	NA
AZX39036.1|997316_998267_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39037.1|998371_999421_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZX41621.1|999558_1000575_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX39038.1|1002083_1002656_-	chorismate--pyruvate lyase	NA	NA	NA	NA	NA
AZX39039.1|1002715_1003447_+	rRNA pseudouridine synthase	NA	NA	NA	NA	NA
AZX41622.1|1003498_1004416_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39040.1|1005223_1008403_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX39041.1|1008399_1009782_+	multidrug transporter	NA	NA	NA	NA	NA
AZX39042.1|1009851_1010103_-	GlsB/YeaQ/YmgE family stress response membrane protein	NA	NA	NA	NA	NA
AZX39043.1|1010248_1010899_-	SCO family protein	NA	NA	NA	NA	NA
AZX39044.1|1011049_1013164_-	M3 family peptidase	NA	NA	NA	NA	NA
AZX39045.1|1013239_1014091_-	bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase	NA	A0A249XZQ2	Enterococcus_phage	39.8	2.1e-33
AZX39046.1|1014087_1014714_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX39047.1|1014710_1016465_-	PAS domain-containing sensor histidine kinase	NA	NA	NA	NA	NA
AZX39048.1|1016757_1019463_+	pyruvate dehydrogenase (acetyl-transferring), homodimeric type	NA	NA	NA	NA	NA
AZX39049.1|1019475_1021137_+	dihydrolipoyllysine-residue acetyltransferase	NA	NA	NA	NA	NA
AZX39050.1|1021149_1022940_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	25.2	2.4e-39
AZX39051.1|1023161_1024337_-	flagellin FliC	NA	NA	NA	NA	NA
AZX39052.1|1024379_1025330_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39053.1|1025428_1026169_-	16S rRNA (uracil(1498)-N(3))-methyltransferase	NA	NA	NA	NA	NA
AZX39054.1|1026363_1028400_+	transketolase	NA	NA	NA	NA	NA
AZX39055.1|1028417_1029428_+	type I glyceraldehyde-3-phosphate dehydrogenase	NA	NA	NA	NA	NA
AZX39056.1|1029545_1030739_+	phosphoglycerate kinase	NA	NA	NA	NA	NA
AZX39057.1|1030768_1031542_-	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX39058.1|1031538_1032729_-	acetate kinase	NA	NA	NA	NA	NA
AZX39059.1|1032754_1033693_-	phosphate acetyltransferase	NA	NA	NA	NA	NA
AZX41623.1|1033689_1036038_-	DUF3141 domain-containing protein	NA	NA	NA	NA	NA
AZX39060.1|1036192_1036900_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX39061.1|1036937_1038071_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39062.1|1038347_1038896_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZX39063.1|1038914_1039400_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX39064.1|1039577_1040516_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZX39065.1|1040518_1040836_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39066.1|1040881_1041826_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39067.1|1043506_1044157_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZX39068.1|1044210_1044546_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39069.1|1044542_1045403_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZX39070.1|1045419_1045701_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39071.1|1045774_1046038_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZX39072.1|1046281_1047232_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39073.1|1047530_1048268_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZX39074.1|1048703_1049027_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZX39075.1|1049061_1049622_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZX39076.1|1049742_1050618_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZX39077.1|1050630_1051578_+	motility protein MotB	NA	NA	NA	NA	NA
AZX39078.1|1051679_1051973_+	response regulator	NA	NA	NA	NA	NA
AZX39079.1|1051999_1054057_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZX39080.1|1054071_1054572_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZX39081.1|1054645_1056352_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZX39082.1|1057215_1058268_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZX39083.1|1058320_1058710_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZX39084.1|1058718_1059351_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZX41624.1|1059450_1060467_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1066451	1134613	4105338	transposase,holin,tRNA	uncultured_Mediterranean_phage(25.0%)	55	NA	NA
AZX39089.1|1066451_1067879_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZX41626.1|1068816_1069833_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX39090.1|1070165_1071101_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZX39091.1|1071150_1073031_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZX39092.1|1073097_1073442_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZX39093.1|1073586_1074723_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZX39094.1|1074719_1075793_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZX39095.1|1075950_1077387_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZX41627.1|1077477_1078119_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX41628.1|1078454_1079471_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX39096.1|1079803_1082551_+	pertactin autotransporter	NA	NA	NA	NA	NA
AZX41629.1|1082617_1084039_-	siroheme synthase	NA	NA	NA	NA	NA
AZX39097.1|1084302_1085019_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39098.1|1085103_1085421_+	DUF883 domain-containing protein	NA	NA	NA	NA	NA
AZX39099.1|1085461_1085875_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX39100.1|1085876_1086236_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39101.1|1086278_1087823_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AZX39102.1|1087906_1088737_+	transglycosylase	NA	NA	NA	NA	NA
AZX39103.1|1088771_1089926_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AZX39104.1|1089968_1090841_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39105.1|1090957_1093246_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX39106.1|1094452_1094917_+	barstar family protein 2	NA	NA	NA	NA	NA
AZX39107.1|1094943_1095894_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41630.1|1096261_1097038_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZX39108.1|1097082_1097940_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZX39109.1|1097961_1098978_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZX39110.1|1099112_1100153_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZX39111.1|1100347_1102429_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZX39112.1|1102664_1104158_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZX39113.1|1104388_1105183_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX39114.1|1105403_1106762_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZX39115.1|1106758_1107601_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZX39116.1|1107619_1109506_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZX39117.1|1109743_1110376_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZX39118.1|1110394_1110997_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39119.1|1111148_1112099_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39120.1|1112901_1113702_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39121.1|1113745_1114732_-	homoserine kinase	NA	NA	NA	NA	NA
AZX39122.1|1114871_1115885_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZX39123.1|1115881_1116832_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39124.1|1116944_1117403_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZX39125.1|1117439_1118753_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39126.1|1118770_1119142_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZX39127.1|1119138_1120602_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZX39128.1|1120694_1121471_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX39129.1|1121452_1124332_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZX39130.1|1124514_1125465_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39131.1|1125632_1126457_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZX39132.1|1126456_1127335_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX39133.1|1128239_1129355_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX39134.1|1129362_1130178_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZX39135.1|1130174_1132040_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZX39136.1|1132118_1132751_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39137.1|1132747_1133050_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39138.1|1133092_1134613_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
>prophage 11
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1156531	1218701	4105338	transposase,tRNA	Erysipelothrix_phage(33.33%)	50	NA	NA
AZX39152.1|1156531_1157482_-|transposase	IS481 family transposase IS481v2	transposase	NA	NA	NA	NA
AZX39153.1|1157580_1158213_-	fimbrial protein	NA	NA	NA	NA	NA
AZX39154.1|1158376_1160659_-	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZX39155.1|1160813_1163510_-	alpha-ketoglutarate dehydrogenase	NA	NA	NA	NA	NA
AZX39156.1|1163635_1164124_+	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX39157.1|1166534_1169405_+	2-oxoglutarate dehydrogenase E1 component	NA	NA	NA	NA	NA
AZX39158.1|1169450_1170665_+	dihydrolipoyllysine-residue succinyltransferase	NA	NA	NA	NA	NA
AZX39159.1|1170894_1172322_+	dihydrolipoyl dehydrogenase	NA	A0A2K5B2C5	Erysipelothrix_phage	28.1	2.1e-41
AZX39160.1|1172362_1173511_+	cell division protein ZapE	NA	NA	NA	NA	NA
AZX39161.1|1173523_1174282_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39162.1|1174369_1175272_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39163.1|1175268_1176219_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39164.1|1176348_1177332_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39165.1|1177386_1178109_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX39166.1|1179587_1180943_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AZX39167.1|1181023_1183399_-	protein tex	NA	NA	NA	NA	NA
AZX39168.1|1183563_1185639_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
AZX39169.1|1185700_1186501_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AZX39170.1|1186602_1187565_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AZX39171.1|1187552_1188308_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
AZX39172.1|1188415_1190053_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
AZX39173.1|1190120_1190858_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX39174.1|1190960_1191536_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
AZX39175.1|1191708_1192245_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39176.1|1192247_1192592_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
AZX39177.1|1192607_1193453_+	FTR1 family iron permease	NA	NA	NA	NA	NA
AZX39178.1|1193491_1194871_+	4Fe-4S binding domain-containing protein	NA	NA	NA	NA	NA
AZX39179.1|1194948_1195830_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX39180.1|1195928_1196879_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39181.1|1196875_1197286_-	VOC family protein	NA	NA	NA	NA	NA
AZX39182.1|1197393_1198248_-	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA	NA
AZX39183.1|1198240_1199203_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39184.1|1199248_1200373_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
AZX41632.1|1200484_1201357_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39185.1|1201481_1202261_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX39186.1|1202414_1203836_+	MFS transporter	NA	NA	NA	NA	NA
AZX39187.1|1204270_1205968_+	sodium:proline symporter	NA	NA	NA	NA	NA
AZX39188.1|1205996_1206119_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41633.1|1206194_1207136_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
AZX39189.1|1207462_1208209_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39190.1|1208216_1209143_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39191.1|1209264_1210182_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39192.1|1210221_1211175_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39193.1|1211199_1211778_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
AZX39194.1|1213451_1214060_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39195.1|1214137_1214491_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39196.1|1214574_1215564_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZX39197.1|1215766_1216717_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39198.1|1216803_1217754_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39199.1|1217750_1218701_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1269629	1326840	4105338	transposase	Klosneuvirus(16.67%)	50	NA	NA
AZX39237.1|1269629_1270580_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39238.1|1274326_1274938_-	DUF2239 domain-containing protein	NA	NA	NA	NA	NA
AZX39239.1|1275160_1276621_+	IMP dehydrogenase	NA	A0A1V0SHK8	Klosneuvirus	41.3	1.6e-97
AZX39240.1|1276717_1278310_+	GMP synthase (glutamine-hydrolyzing)	NA	A0A1V0SH76	Hokovirus	33.3	1.0e-17
AZX39241.1|1278296_1278575_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39242.1|1278633_1278921_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZX39243.1|1278922_1280263_+	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZX39244.1|1280358_1281048_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39245.1|1281060_1282491_+	MFS transporter	NA	NA	NA	NA	NA
AZX39246.1|1284215_1285037_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39247.1|1285047_1286619_+	amidohydrolase	NA	NA	NA	NA	NA
AZX39248.1|1286647_1287625_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX39249.1|1287651_1288455_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.2	2.7e-30
AZX39250.1|1288451_1289246_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX39251.1|1289253_1290489_+	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX39252.1|1290481_1290916_+	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX39253.1|1291665_1292616_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39254.1|1293237_1294965_-	sodium-independent anion transporter	NA	NA	NA	NA	NA
AZX39255.1|1295076_1296435_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX39256.1|1296555_1296741_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39257.1|1296727_1297678_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39258.1|1297718_1298789_+	FUSC family protein	NA	NA	NA	NA	NA
AZX39259.1|1298811_1299690_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZX39260.1|1299861_1300833_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX39261.1|1300995_1301838_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39262.1|1301999_1302680_+	anti-sigma factor	NA	NA	NA	NA	NA
AZX39263.1|1302673_1303843_+	amine oxidase	NA	NA	NA	NA	NA
AZX39264.1|1303839_1304871_+	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZX39265.1|1304914_1306156_+	MFS transporter	NA	NA	NA	NA	NA
AZX39266.1|1306190_1307723_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX39267.1|1307803_1308427_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZX39268.1|1308457_1309069_+	LysE family translocator	NA	NA	NA	NA	NA
AZX39269.1|1309104_1309575_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZX39270.1|1310006_1311011_+	peptidase M20	NA	NA	NA	NA	NA
AZX39271.1|1311047_1312562_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX39272.1|1312565_1313525_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX39273.1|1313553_1314357_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX39274.1|1314358_1315993_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZX39275.1|1316076_1317138_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX39276.1|1317336_1317606_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39277.1|1317609_1318134_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZX39278.1|1318549_1319500_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39279.1|1319496_1320567_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZX39280.1|1320639_1321278_+	DedA family protein	NA	NA	NA	NA	NA
AZX39281.1|1321572_1321800_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZX39282.1|1321922_1322636_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX39283.1|1322880_1323831_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39284.1|1323934_1324216_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39285.1|1324330_1325779_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZX39286.1|1325889_1326840_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1417073	1469226	4105338	transposase,tRNA	Salmonella_phage(25.0%)	45	NA	NA
AZX39367.1|1417073_1418024_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39368.1|1418190_1418544_+	cytochrome C	NA	NA	NA	NA	NA
AZX39369.1|1418556_1418919_+	cytochrome	NA	NA	NA	NA	NA
AZX39370.1|1418960_1419386_-	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AZX39371.1|1419588_1420845_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AZX39372.1|1421043_1422024_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39373.1|1422173_1423415_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39374.1|1423513_1424464_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39375.1|1424472_1425168_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZX39376.1|1427989_1428589_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZX39377.1|1428599_1430765_-	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZX39378.1|1430788_1432573_-	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZX39379.1|1432572_1432662_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZX39380.1|1433356_1433629_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZX39381.1|1433628_1435695_+	cation acetate symporter	NA	NA	NA	NA	NA
AZX39382.1|1435691_1436642_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39383.1|1436740_1437691_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39384.1|1437806_1438139_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZX39385.1|1438135_1438822_-	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZX39386.1|1438808_1439768_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZX41643.1|1439809_1442170_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZX39387.1|1442169_1442802_+	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZX39388.1|1442864_1444244_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZX39389.1|1444290_1445646_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZX39390.1|1445924_1446173_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39391.1|1446360_1446678_-	virulence factor	NA	NA	NA	NA	NA
AZX39392.1|1446950_1447466_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
AZX39393.1|1447559_1447721_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39394.1|1447736_1448492_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX39395.1|1448830_1449037_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39396.1|1449044_1449704_-	antibiotic resistance protein	NA	NA	NA	NA	NA
AZX39397.1|1449998_1452203_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZX39398.1|1452313_1453537_-	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZX39399.1|1453659_1454634_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX39400.1|1454701_1455895_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZX39401.1|1455909_1456710_-	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZX39402.1|1456706_1458563_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZX39403.1|1458559_1459165_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZX39404.1|1459183_1460569_-	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZX39405.1|1461294_1462521_+	transporter	NA	NA	NA	NA	NA
AZX39406.1|1462609_1463392_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX39407.1|1463490_1464441_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39408.1|1464467_1465241_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZX39409.1|1465252_1466494_+	MFS transporter	NA	NA	NA	NA	NA
AZX39410.1|1468275_1469226_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1513151	1572013	4105338	transposase,tRNA,protease	Streptococcus_virus(11.11%)	53	NA	NA
AZX41644.1|1513151_1513640_+|tRNA	Cys-tRNA(Pro) deacylase	tRNA	NA	NA	NA	NA
AZX39458.1|1513757_1514336_+|protease	protease	protease	NA	NA	NA	NA
AZX39459.1|1514408_1514810_+	aryl-sulfate sulfotransferase	NA	NA	NA	NA	NA
AZX39460.1|1514908_1515859_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39461.1|1515865_1516978_-	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AZX39462.1|1517664_1518867_+	MFS transporter	NA	NA	NA	NA	NA
AZX39463.1|1519070_1521731_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39464.1|1521743_1525148_+	nuclease	NA	NA	NA	NA	NA
AZX39465.1|1525815_1528041_+	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
AZX39466.1|1528087_1528414_+	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AZX39467.1|1528464_1529073_+	recombination protein RecR	NA	NA	NA	NA	NA
AZX39468.1|1529171_1530122_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39469.1|1530191_1530956_-	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AZX39470.1|1530952_1531552_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41645.1|1531655_1532501_-	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
AZX39471.1|1532566_1533193_+	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AZX39472.1|1533189_1534140_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39473.1|1534126_1534315_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39474.1|1534238_1535360_-	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
AZX39475.1|1535340_1536342_-	aminopeptidase	NA	NA	NA	NA	NA
AZX39476.1|1536447_1537959_-	thiol oxidoreductase	NA	NA	NA	NA	NA
AZX39477.1|1537955_1539260_-	peptidase	NA	NA	NA	NA	NA
AZX39478.1|1539371_1539932_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX39479.1|1540199_1540754_+	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
AZX39480.1|1541209_1541425_-	dodecin domain-containing protein	NA	NA	NA	NA	NA
AZX41646.1|1541679_1544277_+	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
AZX39481.1|1544273_1545461_+	cupin	NA	NA	NA	NA	NA
AZX39482.1|1546118_1546733_+	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
AZX39483.1|1546821_1547949_-	lipoprotein	NA	NA	NA	NA	NA
AZX39484.1|1547960_1548866_-	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AZX39485.1|1549758_1550709_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39486.1|1550890_1551643_+	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AZX39487.1|1551711_1552371_+	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AZX39488.1|1552367_1553096_+	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
AZX39489.1|1553108_1555388_-	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
AZX39490.1|1555412_1555616_-	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AZX39491.1|1555657_1556305_-	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
AZX39492.1|1556425_1557343_-	cytochrome C	NA	NA	NA	NA	NA
AZX39493.1|1557339_1558053_-	cytochrome C	NA	NA	NA	NA	NA
AZX39494.1|1558290_1559061_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39495.1|1559065_1559665_-	NlpC/P60 family protein	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
AZX39496.1|1559909_1561400_+	AMP nucleosidase	NA	NA	NA	NA	NA
AZX39497.1|1561458_1561743_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX39498.1|1561739_1561868_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39499.1|1561880_1562036_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39500.1|1562308_1563235_-	YicC family protein	NA	NA	NA	NA	NA
AZX39501.1|1563371_1564112_+	ribonuclease PH	NA	NA	NA	NA	NA
AZX39502.1|1564278_1565655_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX39503.1|1565836_1566742_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX39504.1|1566776_1568516_+	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.1	1.0e-10
AZX39505.1|1568393_1570196_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX39506.1|1570313_1570964_+	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA	NA
AZX39507.1|1571062_1572013_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1617185	1672776	4105338	transposase	Brazilian_cedratvirus(25.0%)	47	NA	NA
AZX39538.1|1617185_1618136_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39539.1|1618194_1618968_+	oxidoreductase	NA	NA	NA	NA	NA
AZX39540.1|1618960_1620517_+	LTA synthase family protein	NA	NA	NA	NA	NA
AZX39541.1|1620513_1621464_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39542.1|1622790_1623393_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39543.1|1623632_1624334_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX39544.1|1624327_1625110_-	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZX39545.1|1625294_1626245_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39546.1|1626343_1627081_-	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZX39547.1|1627270_1628029_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39548.1|1628075_1629065_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39549.1|1629242_1630211_-	transporter	NA	NA	NA	NA	NA
AZX39550.1|1631750_1632719_+	AAA family ATPase	NA	NA	NA	NA	NA
AZX39551.1|1632727_1633669_+	DUF58 domain-containing protein	NA	NA	NA	NA	NA
AZX39552.1|1634142_1635153_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41650.1|1635143_1636658_+	VWA domain-containing protein	NA	NA	NA	NA	NA
AZX39553.1|1636654_1638001_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41651.1|1638003_1639038_+	haloacid dehalogenase-like hydrolase	NA	NA	NA	NA	NA
AZX39554.1|1639087_1640713_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZX39555.1|1641265_1642216_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39556.1|1642320_1643268_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41652.1|1643321_1645136_-	histidine kinase	NA	NA	NA	NA	NA
AZX39557.1|1645128_1645803_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZX39558.1|1645932_1649007_+	autotransporter SphB2	NA	NA	NA	NA	NA
AZX39559.1|1649020_1649320_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX41653.1|1649634_1650258_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZX39560.1|1650501_1651371_+	TauD/TfdA family dioxygenase	NA	NA	NA	NA	NA
AZX39561.1|1651348_1652293_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41654.1|1652378_1653350_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX41655.1|1653417_1654191_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39562.1|1654187_1655384_-	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZX39563.1|1655414_1656365_-	hydrolase	NA	NA	NA	NA	NA
AZX39564.1|1656586_1657276_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZX39565.1|1657340_1658096_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39566.1|1658147_1659140_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39567.1|1659149_1660103_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41656.1|1660218_1661181_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39568.1|1662582_1663011_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39569.1|1663007_1663958_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41657.1|1664251_1664974_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZX39570.1|1665412_1666600_-	MFS transporter	NA	NA	NA	NA	NA
AZX39571.1|1666603_1666984_-	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39572.1|1668703_1669675_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39573.1|1669688_1670402_+	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39574.1|1670406_1671324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39575.1|1671430_1671727_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39576.1|1671825_1672776_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1905540	1975192	4105338	transposase,tRNA	Staphylococcus_phage(16.67%)	56	NA	NA
AZX39750.1|1905540_1908198_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
AZX39751.1|1908275_1909478_-	MFS transporter	NA	NA	NA	NA	NA
AZX39752.1|1909474_1909987_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41667.1|1910109_1910448_-	DNA-binding protein	NA	NA	NA	NA	NA
AZX39753.1|1910823_1911774_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39754.1|1911872_1912823_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39755.1|1912986_1914882_+	STAS domain-containing protein	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.5	2.3e-19
AZX39756.1|1914995_1915163_-	50S ribosomal protein L33	NA	NA	NA	NA	NA
AZX39757.1|1915226_1915463_-	50S ribosomal protein L28	NA	NA	NA	NA	NA
AZX39758.1|1915831_1917031_-	Bcr/CflA family drug resistance efflux transporter	NA	NA	NA	NA	NA
AZX39759.1|1918546_1919497_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39760.1|1919948_1920950_+	glycine/betaine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX39761.1|1921122_1921980_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX39762.1|1921976_1923239_+	glycine betaine/L-proline ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	36.6	6.8e-28
AZX39763.1|1923339_1923714_+	4-oxalocrotonate tautomerase	NA	NA	NA	NA	NA
AZX39764.1|1923762_1924974_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZX39765.1|1925058_1925829_+	spermidine synthase	NA	NA	NA	NA	NA
AZX39766.1|1925942_1926707_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41668.1|1926822_1927959_+	malonyl-CoA decarboxylase	NA	NA	NA	NA	NA
AZX39767.1|1927955_1928762_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX39768.1|1930506_1931478_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39769.1|1931634_1932147_+	superoxide dismutase [Cu-Zn] SodC1	NA	Q9MC02	Salmonella_phage	52.3	1.8e-43
AZX39770.1|1932305_1933280_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX39771.1|1934280_1935075_+	ABC transporter ATP-binding protein	NA	A0A1V0SE00	Indivirus	25.7	5.1e-05
AZX41669.1|1935100_1935907_-	molybdenum-dependent transcriptional regulator	NA	NA	NA	NA	NA
AZX39772.1|1936017_1936608_+	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZX39773.1|1936618_1937797_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39774.1|1937899_1938274_+	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX39775.1|1938526_1939858_+	efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZX39776.1|1939924_1943155_+	multidrug efflux RND transporter permease subunit	NA	NA	NA	NA	NA
AZX39777.1|1944645_1945392_+	pyridoxine 5'-phosphate synthase	NA	NA	NA	NA	NA
AZX39778.1|1945476_1945938_+	holo-ACP synthase	NA	NA	NA	NA	NA
AZX39779.1|1945975_1947034_+	beta-hexosaminidase	NA	NA	NA	NA	NA
AZX39780.1|1946996_1948826_+	UvrABC system protein C	NA	NA	NA	NA	NA
AZX39781.1|1948865_1949438_+	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	NA	NA	NA	NA	NA
AZX39782.1|1950862_1951774_-	NADPH-dependent 7-cyano-7-deazaguanine reductase QueF	NA	A0A2I7SAX1	Vibrio_phage	37.6	5.9e-42
AZX39783.1|1952002_1953325_+	isocitrate lyase	NA	NA	NA	NA	NA
AZX39784.1|1953684_1954320_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39785.1|1954279_1955230_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39786.1|1956100_1956973_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX39787.1|1957050_1958190_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX39788.1|1958539_1959805_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AZX39789.1|1959810_1960338_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZX39790.1|1960342_1961161_+	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX39791.1|1961160_1961883_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX39792.1|1961904_1962219_+	ferredoxin	NA	NA	NA	NA	NA
AZX39793.1|1962215_1963385_+	CoA transferase	NA	NA	NA	NA	NA
AZX39794.1|1963415_1964291_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX39795.1|1964287_1965607_-	phenylacetate--CoA ligase family protein	NA	NA	NA	NA	NA
AZX39796.1|1965679_1966876_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZX39797.1|1966886_1968374_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39798.1|1970968_1971868_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39799.1|1972005_1972971_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39800.1|1973069_1974020_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39801.1|1974063_1974255_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39802.1|1974241_1975192_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	1986688	2036084	4105338	transposase	Erysipelothrix_phage(16.67%)	44	NA	NA
AZX39814.1|1986688_1987639_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39815.1|1988776_1989073_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39816.1|1989247_1990600_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZX41671.1|1990742_1991759_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX41672.1|1993738_1994752_-	flavin-nucleotide-binding protein	NA	NA	NA	NA	NA
AZX39817.1|1994838_1995744_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39818.1|1995900_1996245_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39819.1|1996402_1996861_+	(2Fe-2S)-binding protein	NA	NA	NA	NA	NA
AZX39820.1|1996874_1999091_+	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZX39821.1|1999087_2000149_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39822.1|2000177_2001152_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX39823.1|2001103_2001922_-	hypothetical protein	NA	A0A1B1INV8	uncultured_Mediterranean_phage	28.8	2.3e-16
AZX39824.1|2001934_2002543_-	peptidase S16	NA	NA	NA	NA	NA
AZX39825.1|2002717_2003113_+	VOC family protein	NA	NA	NA	NA	NA
AZX39826.1|2003131_2004571_+	MFS transporter	NA	A0A0M3UL24	Mycobacterium_phage	37.4	7.4e-55
AZX39827.1|2004599_2004947_+	GFA family protein	NA	NA	NA	NA	NA
AZX39828.1|2004965_2005916_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39829.1|2006568_2007519_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39830.1|2007602_2009420_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZX39831.1|2009493_2010141_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39832.1|2010153_2011083_-	ZIP family metal transporter	NA	NA	NA	NA	NA
AZX39833.1|2011252_2011717_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39834.1|2011964_2012645_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39835.1|2012693_2014385_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZX39836.1|2014400_2014952_-	ATPase	NA	NA	NA	NA	NA
AZX39837.1|2014948_2015320_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX39838.1|2015432_2016269_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX39839.1|2016279_2016804_-	DUF302 domain-containing protein	NA	NA	NA	NA	NA
AZX39840.1|2016901_2017081_+	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZX39841.1|2017210_2018242_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX39842.1|2018315_2018672_+	DUF1428 domain-containing protein	NA	NA	NA	NA	NA
AZX41673.1|2018661_2019537_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZX39843.1|2019635_2020520_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39844.1|2020541_2021837_-	DUF445 domain-containing protein	NA	NA	NA	NA	NA
AZX39845.1|2022785_2023436_+	flavodoxin family protein	NA	NA	NA	NA	NA
AZX41674.1|2023523_2025044_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZX39846.1|2025301_2027167_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZX39847.1|2028212_2029163_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39848.1|2030135_2030495_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZX39849.1|2030482_2031919_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AZX39850.1|2031915_2032569_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX39851.1|2032565_2033765_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZX39852.1|2033862_2035137_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZX39853.1|2035133_2036084_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2047288	2087979	4105338	transposase,tRNA,protease	Klosneuvirus(25.0%)	36	NA	NA
AZX39867.1|2047288_2048239_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39868.1|2048337_2049288_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39869.1|2049247_2049661_-	transcriptional regulator	NA	A0A222YXG1	Escherichia_phage	59.0	3.8e-36
AZX39870.1|2049945_2050245_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41676.1|2050654_2052823_-	RNA polymerase sigma factor RpoD	NA	A0A2I7SAT0	Vibrio_phage	30.1	3.1e-36
AZX39871.1|2053622_2055653_-	DNA primase	NA	A0A0K1LMQ9	Caulobacter_phage	41.9	1.0e-65
AZX39872.1|2055672_2055885_-	30S ribosomal protein S21	NA	NA	NA	NA	NA
AZX39873.1|2056162_2056702_-	phosphoribosyltransferase	NA	NA	NA	NA	NA
AZX39874.1|2056815_2058123_-	adenylosuccinate synthetase	NA	A0A160ER07	Powai_lake_megavirus	33.5	3.0e-63
AZX39875.1|2058187_2059345_-	ATP phosphoribosyltransferase regulatory subunit	NA	NA	NA	NA	NA
AZX39876.1|2059528_2060428_-|protease	protease modulator HflC	protease	NA	NA	NA	NA
AZX39877.1|2060446_2061751_-|protease	FtsH protease activity modulator HflK	protease	NA	NA	NA	NA
AZX39878.1|2061716_2062823_-	GTPase HflX	NA	NA	NA	NA	NA
AZX39879.1|2062910_2063147_-	RNA-binding protein Hfq	NA	NA	NA	NA	NA
AZX39880.1|2063285_2064356_-	histidinol-phosphate aminotransferase 1	NA	A0A1X6WGT4	Pacmanvirus	25.7	2.5e-15
AZX39881.1|2064359_2065715_-	ribosome biogenesis GTPase Der	NA	NA	NA	NA	NA
AZX39882.1|2065741_2066902_-	outer membrane protein assembly factor BamB	NA	NA	NA	NA	NA
AZX39883.1|2066904_2067543_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39884.1|2067544_2068849_-|tRNA	histidine--tRNA ligase	tRNA	NA	NA	NA	NA
AZX39885.1|2068889_2070185_-	4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin)	NA	NA	NA	NA	NA
AZX39886.1|2070191_2070698_-	helix-turn-helix domain-containing protein	NA	NA	NA	NA	NA
AZX39887.1|2070694_2071843_-	23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN	NA	NA	NA	NA	NA
AZX39888.1|2071870_2072296_-	nucleoside-diphosphate kinase	NA	D2E8E1	Anguillid_herpesvirus	43.2	2.1e-21
AZX39889.1|2072618_2075501_+|tRNA	valine--tRNA ligase	tRNA	A0A1V0SK04	Klosneuvirus	37.1	3.7e-138
AZX39890.1|2075593_2076349_-	MipA/OmpV family protein	NA	NA	NA	NA	NA
AZX39891.1|2077114_2078464_+	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZX39892.1|2078562_2079513_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39893.1|2079611_2080562_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39894.1|2080635_2081109_+	RidA family protein	NA	NA	NA	NA	NA
AZX39895.1|2081134_2082343_+	aminotransferase class V-fold PLP-dependent enzyme	NA	NA	NA	NA	NA
AZX39896.1|2082339_2083113_-|tRNA	tRNA (guanosine(37)-N1)-methyltransferase TrmD	tRNA	NA	NA	NA	NA
AZX39897.1|2083112_2083736_-	ribosome maturation factor RimM	NA	NA	NA	NA	NA
AZX39898.1|2083901_2084162_-	30S ribosomal protein S16	NA	NA	NA	NA	NA
AZX39899.1|2084465_2085047_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39900.1|2085113_2085368_-	sulfurtransferase TusA family protein	NA	NA	NA	NA	NA
AZX39901.1|2085354_2087979_-|tRNA	alanine--tRNA ligase	tRNA	A0A1V0SK38	Klosneuvirus	39.4	1.7e-81
>prophage 19
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2115762	2176967	4105338	transposase,tRNA,protease	Lake_Baikal_phage(21.43%)	53	NA	NA
AZX39921.1|2115762_2116713_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39922.1|2116913_2117723_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX39923.1|2117847_2118798_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39924.1|2118794_2119688_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AZX39925.1|2119812_2120007_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZX39926.1|2120006_2120348_-	ISC system 2Fe-2S type ferredoxin	NA	NA	NA	NA	NA
AZX39927.1|2120357_2122220_-	chaperone protein HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZX39928.1|2122349_2122862_-	co-chaperone protein HscB	NA	NA	NA	NA	NA
AZX39929.1|2122864_2123188_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZX39930.1|2123189_2123600_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZX39931.1|2123637_2124849_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZX39932.1|2124866_2125379_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZX39933.1|2125594_2126086_-	low molecular weight phosphotyrosine protein phosphatase	NA	NA	NA	NA	NA
AZX39934.1|2126338_2128375_-	UvrABC system protein B	NA	NA	NA	NA	NA
AZX39935.1|2128452_2129655_+	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZX39936.1|2129705_2130434_+	transcriptional repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	2.8e-10
AZX39937.1|2131991_2132942_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39938.1|2133512_2133725_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39939.1|2133742_2134474_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39940.1|2134508_2135150_-	CoA transferase subunit B	NA	NA	NA	NA	NA
AZX39941.1|2135142_2135859_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZX39942.1|2138023_2138800_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZX39943.1|2138821_2139979_-	thiolase	NA	NA	NA	NA	NA
AZX39944.1|2139975_2140407_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39945.1|2140403_2141207_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX39946.1|2141220_2141676_-	MaoC family dehydratase	NA	NA	NA	NA	NA
AZX39947.1|2141688_2142660_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX39948.1|2142725_2143949_-	CoA transferase	NA	NA	NA	NA	NA
AZX39949.1|2144176_2145127_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX39950.1|2145250_2147704_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZX39951.1|2147892_2149197_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZX39952.1|2149301_2149955_-|protease	ATP-dependent Clp protease proteolytic subunit	protease	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZX39953.1|2149957_2151268_-	trigger factor	NA	NA	NA	NA	NA
AZX39954.1|2151446_2152025_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZX39955.1|2152136_2152337_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZX39956.1|2152682_2153249_-	DUF924 domain-containing protein	NA	NA	NA	NA	NA
AZX39957.1|2153332_2153536_-	cold-shock protein CspA	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZX39958.1|2153842_2154163_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39959.1|2154204_2154486_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39960.1|2154560_2155817_-	autotransporter Phg	NA	NA	NA	NA	NA
AZX39961.1|2156199_2156529_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX39962.1|2158099_2158921_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZX39963.1|2158920_2160060_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZX39964.1|2160066_2160963_+	50S ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZX39965.1|2160959_2162885_+	ABC transporter ATP-binding protein	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZX39966.1|2163244_2165857_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZX39967.1|2165909_2168210_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZX39968.1|2168206_2169415_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZX39969.1|2169676_2170051_+	hypothetical protein	NA	NA	NA	NA	NA
AZX39970.1|2170047_2170998_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39971.1|2171096_2173091_-	phosphoribosylglycinamide formyltransferase	NA	M4QRX9	Synechococcus_phage	33.3	4.4e-21
AZX39972.1|2173150_2174116_+	bifunctional riboflavin kinase/FAD synthetase	NA	NA	NA	NA	NA
AZX39973.1|2174105_2176967_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
>prophage 20
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2180360	2228375	4105338	transposase,tRNA	uncultured_Mediterranean_phage(16.67%)	44	NA	NA
AZX39978.1|2180360_2181311_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39979.1|2181297_2181477_-	hypothetical protein	NA	NA	NA	NA	NA
AZX39980.1|2181421_2181862_-	DUF937 domain-containing protein	NA	NA	NA	NA	NA
AZX39981.1|2181990_2183220_-	lytic murein transglycosylase	NA	NA	NA	NA	NA
AZX39982.1|2183258_2184080_-	DUF455 domain-containing protein	NA	NA	NA	NA	NA
AZX39983.1|2184133_2185285_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZX39984.1|2185376_2185865_-	DUF1854 domain-containing protein	NA	NA	NA	NA	NA
AZX39985.1|2188391_2190965_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX39986.1|2191035_2193609_+	cyanophycin synthetase	NA	NA	NA	NA	NA
AZX39987.1|2193874_2194075_+	CsbD family protein	NA	NA	NA	NA	NA
AZX39988.1|2194106_2194268_+	DUF1328 domain-containing protein	NA	NA	NA	NA	NA
AZX39989.1|2194325_2194664_+	phospholipid-binding protein	NA	NA	NA	NA	NA
AZX39990.1|2194812_2195763_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX39991.1|2195861_2196581_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZX41678.1|2196657_2197206_+	arylesterase	NA	NA	NA	NA	NA
AZX39992.1|2197187_2199203_-	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZX39993.1|2199385_2200135_+	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZX39994.1|2200147_2201011_+	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZX39995.1|2201014_2202430_-	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZX39996.1|2202563_2203292_-	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZX39997.1|2203430_2203631_-	copper chaperone	NA	NA	NA	NA	NA
AZX39998.1|2203806_2204205_+	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX39999.1|2204228_2205629_-	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZX41679.1|2205747_2206500_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40000.1|2206788_2207466_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40001.1|2207492_2208272_-	3'-5' exonuclease	NA	NA	NA	NA	NA
AZX40002.1|2208268_2209153_-	peptidase	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZX41680.1|2209170_2209860_-	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZX40003.1|2209934_2210693_-	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZX40004.1|2210818_2211466_+	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZX41681.1|2211733_2212750_+|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX40005.1|2212847_2213888_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZX40006.1|2214022_2215315_+	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZX40007.1|2216674_2217058_+	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZX40008.1|2217075_2217663_-	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZX40009.1|2217700_2218651_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40010.1|2218749_2219310_-	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AZX40011.1|2219306_2219852_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40012.1|2220047_2221076_+	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40013.1|2221116_2222457_+	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AZX40014.1|2222565_2223570_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40015.1|2223676_2226277_+	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AZX40016.1|2226375_2227326_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40017.1|2227424_2228375_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2474963	2533207	4105338	transposase,tRNA	Planktothrix_phage(28.57%)	53	NA	NA
AZX40224.1|2474963_2475914_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40225.1|2476393_2477050_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AZX40226.1|2477064_2478732_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZX40227.1|2478734_2479364_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40228.1|2479575_2480670_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40229.1|2480814_2481627_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZX40230.1|2481630_2483334_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
AZX40231.1|2483384_2484515_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX40232.1|2484701_2485778_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AZX41692.1|2485859_2486510_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZX40233.1|2486524_2487958_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AZX40234.1|2488211_2489030_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40235.1|2489026_2489731_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
AZX40236.1|2490630_2491746_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40237.1|2491779_2492154_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40238.1|2492176_2493334_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
AZX40239.1|2493346_2493580_-	lipoprotein	NA	NA	NA	NA	NA
AZX40240.1|2494214_2497184_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX40241.1|2497198_2497408_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZX40242.1|2497559_2498189_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40243.1|2498185_2500303_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
AZX40244.1|2500299_2500980_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
AZX40245.1|2500976_2501537_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
AZX40246.1|2501543_2502641_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZX40247.1|2502778_2503387_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
AZX40248.1|2503383_2504676_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX40249.1|2504689_2505232_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
AZX40250.1|2505241_2506078_-	M48 family peptidase	NA	NA	NA	NA	NA
AZX40251.1|2506111_2507173_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
AZX40252.1|2507214_2508267_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZX40253.1|2508282_2508585_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40254.1|2508726_2509677_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40255.1|2509855_2511550_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZX40256.1|2511546_2512632_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
AZX40257.1|2512679_2513579_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40258.1|2513589_2514234_+	histidine phosphatase family protein	NA	NA	NA	NA	NA
AZX40259.1|2515255_2518498_-	carbamoyl-phosphate synthase large subunit	NA	NA	NA	NA	NA
AZX40260.1|2518508_2519606_-	carbamoyl-phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.2	5.3e-53
AZX40261.1|2519868_2520852_+	transaldolase	NA	H6WFR1	Cyanophage	29.2	5.9e-11
AZX40262.1|2520950_2521901_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40263.1|2521999_2522950_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40264.1|2522959_2523649_-	VIT family protein	NA	NA	NA	NA	NA
AZX40265.1|2523708_2524146_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZX40266.1|2524191_2525085_-	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZX40267.1|2525132_2526305_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX40268.1|2526301_2527456_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX40269.1|2527652_2528003_-	RnfH family protein	NA	NA	NA	NA	NA
AZX40270.1|2527992_2528427_-	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZX40271.1|2528443_2529394_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40272.1|2529541_2530009_+	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZX40273.1|2529989_2531147_-	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZX40274.1|2531212_2532139_-	paraslipin	NA	NA	NA	NA	NA
AZX40275.1|2532256_2533207_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2575485	2641985	4105338	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
AZX40314.1|2575485_2576436_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40315.1|2576805_2577378_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
AZX40316.1|2577380_2578391_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
AZX40317.1|2578383_2578884_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
AZX40318.1|2578894_2579236_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
AZX40319.1|2579247_2580039_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA	NA
AZX40320.1|2580055_2580325_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA	NA
AZX40321.1|2580347_2581136_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
AZX41696.1|2581182_2582199_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX40322.1|2582415_2583858_-	PAS domain S-box protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
AZX40323.1|2584036_2585656_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
AZX40324.1|2585776_2587597_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
AZX40325.1|2587675_2589208_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
AZX40326.1|2589241_2590888_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
AZX40327.1|2590957_2591980_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
AZX40328.1|2591997_2593131_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA	NA
AZX40329.1|2593133_2593823_-	flagellar L-ring protein	NA	NA	NA	NA	NA
AZX40330.1|2593822_2594608_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
AZX40331.1|2594651_2595416_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
AZX40332.1|2595454_2596876_-	flagellar hook protein FlgE	NA	NA	NA	NA	NA
AZX40333.1|2596941_2597646_-	flagellar basal body rod modification protein	NA	NA	NA	NA	NA
AZX40334.1|2597693_2598113_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
AZX40335.1|2598125_2598533_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
AZX41697.1|2598716_2599427_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
AZX40336.1|2599553_2599844_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
AZX40337.1|2599861_2600344_+	flagellar protein FlgN	NA	NA	NA	NA	NA
AZX40338.1|2604849_2606004_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
AZX41698.1|2606309_2607326_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX40339.1|2607572_2608361_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40340.1|2608427_2609108_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX40341.1|2609104_2609875_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
AZX40342.1|2609973_2610924_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40343.1|2610979_2611897_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AZX40344.1|2611907_2613086_-	mandelate racemase	NA	NA	NA	NA	NA
AZX40345.1|2613105_2614101_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40346.1|2615689_2616298_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZX40347.1|2616285_2617326_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZX40348.1|2617343_2618306_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40349.1|2618302_2619496_-	CoA transferase	NA	NA	NA	NA	NA
AZX40350.1|2619492_2620290_-	citryl-CoA lyase	NA	NA	NA	NA	NA
AZX40351.1|2620315_2621302_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40352.1|2621320_2623360_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
AZX41699.1|2623561_2624242_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40353.1|2624255_2625167_-	CoA ester lyase	NA	NA	NA	NA	NA
AZX40354.1|2625163_2625742_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX40355.1|2625880_2626786_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40356.1|2626793_2630213_+	nuclease	NA	NA	NA	NA	NA
AZX40357.1|2630200_2632801_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
AZX40358.1|2633756_2634389_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40359.1|2634782_2635541_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40360.1|2635537_2636740_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX40361.1|2636927_2637878_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40362.1|2638785_2639931_+	DUF3182 domain-containing protein	NA	NA	NA	NA	NA
AZX41700.1|2639950_2640673_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX40363.1|2640789_2640969_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40364.1|2641034_2641985_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2805589	2860106	4105338	transposase	Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)	49	NA	NA
AZX40495.1|2805589_2806540_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40496.1|2806526_2806721_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40497.1|2806868_2807474_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZX40498.1|2807527_2808841_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZX40499.1|2808915_2809386_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZX40500.1|2809385_2810174_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZX40501.1|2810184_2811837_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZX40502.1|2811924_2812875_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41712.1|2814036_2814543_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZX40503.1|2814539_2815304_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZX40504.1|2815319_2815604_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZX40505.1|2815668_2816658_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZX40506.1|2816829_2817759_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZX40507.1|2817730_2818417_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZX40508.1|2818450_2818996_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZX40509.1|2819040_2820306_+	peptidase M48	NA	NA	NA	NA	NA
AZX40510.1|2820302_2821205_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZX40511.1|2822386_2823331_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX40512.1|2823425_2824943_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40513.1|2824984_2826613_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZX40514.1|2826720_2827602_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40515.1|2830714_2831089_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZX40516.1|2831113_2831452_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZX40517.1|2831495_2833130_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZX40518.1|2833168_2834515_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZX41713.1|2834622_2836044_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZX40519.1|2836113_2836698_-	nitroreductase	NA	NA	NA	NA	NA
AZX40520.1|2836800_2837751_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40521.1|2837885_2838992_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40522.1|2839002_2840100_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZX40523.1|2840244_2841450_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZX40524.1|2841456_2841978_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZX40525.1|2841974_2842466_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZX40526.1|2842462_2842714_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZX40527.1|2842694_2843180_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZX40528.1|2843315_2846777_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40529.1|2846773_2847679_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZX40530.1|2847688_2848120_-	lipoprotein	NA	NA	NA	NA	NA
AZX41714.1|2848366_2848870_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZX40531.1|2848881_2850348_+	MFS transporter	NA	NA	NA	NA	NA
AZX40532.1|2850422_2851298_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41715.1|2851294_2852302_-	biotin synthase	NA	NA	NA	NA	NA
AZX40533.1|2852769_2853075_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX40534.1|2853165_2853756_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41716.1|2853946_2854963_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX40535.1|2855154_2857491_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
AZX40536.1|2857573_2858008_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZX40537.1|2858106_2859057_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40538.1|2859155_2860106_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2868131	2924916	4105338	transposase,protease	uncultured_Mediterranean_phage(28.57%)	40	NA	NA
AZX40546.1|2868131_2869082_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40547.1|2870788_2871094_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40548.1|2871762_2872101_+	transcriptional regulator	NA	NA	NA	NA	NA
AZX40549.1|2876653_2877256_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40550.1|2877352_2878642_+	MFS transporter	NA	NA	NA	NA	NA
AZX40551.1|2878699_2879431_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZX40552.1|2879427_2880231_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZX40553.1|2880227_2881316_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZX40554.1|2881312_2882242_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX40555.1|2882390_2883536_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40556.1|2883557_2884508_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40557.1|2884838_2888660_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZX40558.1|2888816_2889485_-	lipoprotein	NA	NA	NA	NA	NA
AZX40559.1|2889489_2891163_-	MCE family protein	NA	NA	NA	NA	NA
AZX40560.1|2891181_2892501_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZX40561.1|2892505_2894857_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZX41717.1|2894876_2897045_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZX40562.1|2897041_2902231_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZX40563.1|2902320_2902635_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZX40564.1|2902862_2903108_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZX40565.1|2903202_2903721_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZX40566.1|2903820_2905026_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZX40567.1|2905141_2906539_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZX40568.1|2906655_2907234_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZX40569.1|2907306_2908698_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZX40570.1|2908865_2909816_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40571.1|2910096_2910717_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZX40572.1|2910713_2911127_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZX40573.1|2911123_2912167_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZX40574.1|2912222_2912411_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40575.1|2912420_2913185_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZX40576.1|2913275_2913932_+	adenylate kinase	NA	NA	NA	NA	NA
AZX40577.1|2914023_2914782_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX40578.1|2914807_2916409_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZX40579.1|2916609_2917614_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZX40580.1|2917714_2917978_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZX40581.1|2918095_2918872_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZX40582.1|2919462_2920413_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40583.1|2922796_2923909_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZX40584.1|2923965_2924916_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	2955302	2998993	4105338	transposase	Planktothrix_phage(33.33%)	42	NA	NA
AZX40613.1|2955302_2956253_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40614.1|2956239_2956485_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40615.1|2956373_2957270_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZX40616.1|2959547_2961773_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AZX40617.1|2961937_2963026_+	methionine import ATP-binding protein MetN	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZX40618.1|2962982_2963636_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX40619.1|2963683_2964481_+	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40620.1|2965012_2965963_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40621.1|2966043_2967192_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZX40622.1|2967248_2968199_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40623.1|2968185_2968404_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40624.1|2968297_2968603_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZX40625.1|2968631_2969066_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZX40626.1|2969067_2970312_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZX40627.1|2970308_2971019_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41719.1|2971033_2971945_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40628.1|2972307_2972712_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40629.1|2972708_2973167_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40630.1|2973173_2974082_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41720.1|2974078_2974945_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZX40631.1|2974931_2975759_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZX40632.1|2975769_2976897_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZX40633.1|2977974_2979213_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40634.1|2979254_2980517_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40635.1|2980523_2981276_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX40636.1|2981327_2981513_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41721.1|2981788_2982253_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZX40637.1|2982284_2982944_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZX40638.1|2983088_2985197_+	AsmA family protein	NA	NA	NA	NA	NA
AZX40639.1|2985193_2986144_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40640.1|2986247_2986868_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41722.1|2986971_2987712_+	oxidoreductase	NA	NA	NA	NA	NA
AZX40641.1|2988846_2989971_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40642.1|2990016_2990385_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40643.1|2990626_2991577_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40644.1|2992612_2993155_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40645.1|2993359_2993554_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40646.1|2993540_2994491_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40647.1|2994487_2995453_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40648.1|2995522_2996359_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
AZX40649.1|2996835_2997981_+	porin	NA	NA	NA	NA	NA
AZX40650.1|2998042_2998993_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	3183411	3244440	4105338	transposase	Xanthomonas_phage(50.0%)	49	NA	NA
AZX40797.1|3183411_3184362_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40798.1|3184370_3184919_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA	NA
AZX40799.1|3184915_3185524_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX40800.1|3185706_3186177_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX40801.1|3186183_3187443_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZX40802.1|3187495_3188308_-	oxidoreductase	NA	NA	NA	NA	NA
AZX40803.1|3188422_3188977_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX40804.1|3188986_3189976_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40805.1|3190155_3190875_-	VOC family protein	NA	NA	NA	NA	NA
AZX40806.1|3190891_3193627_-	protein translocase subunit SecA	NA	NA	NA	NA	NA
AZX40807.1|3193806_3194793_-	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
AZX40808.1|3194834_3195329_+	DUF721 domain-containing protein	NA	NA	NA	NA	NA
AZX40809.1|3195440_3196364_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
AZX40810.1|3196592_3197777_-	cell division protein FtsZ	NA	NA	NA	NA	NA
AZX40811.1|3197965_3199192_-	cell division protein FtsA	NA	NA	NA	NA	NA
AZX40812.1|3199196_3200018_-	cell division protein FtsQ	NA	NA	NA	NA	NA
AZX40813.1|3200030_3200981_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AZX40814.1|3200977_3202384_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AZX40815.1|3202380_3203454_-	undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AZX40816.1|3203450_3204644_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AZX40817.1|3204640_3206173_-	UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase	NA	NA	NA	NA	NA
AZX40818.1|3206169_3207339_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AZX40819.1|3207328_3210166_-	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase	NA	NA	NA	NA	NA
AZX41738.1|3210162_3211863_-	penicillin-binding protein 2	NA	NA	NA	NA	NA
AZX40820.1|3211889_3212168_-	cell division protein FtsL	NA	NA	NA	NA	NA
AZX40821.1|3212167_3213262_-	ribosomal RNA small subunit methyltransferase H	NA	NA	NA	NA	NA
AZX40822.1|3213270_3213762_-	transcriptional regulator MraZ	NA	NA	NA	NA	NA
AZX40823.1|3214501_3216310_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
AZX40824.1|3216349_3217429_-	dihydroorotase	NA	NA	NA	NA	NA
AZX40825.1|3217425_3218619_-	amidohydrolase	NA	NA	NA	NA	NA
AZX40826.1|3218768_3219047_+	DNA topoisomerase III	NA	NA	NA	NA	NA
AZX40827.1|3219375_3219768_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41739.1|3226492_3226969_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX40828.1|3227121_3228234_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
AZX40829.1|3228301_3228862_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AZX40830.1|3228885_3229218_-	cytochrome C	NA	NA	NA	NA	NA
AZX40831.1|3229201_3230890_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZX40832.1|3231009_3231798_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AZX40833.1|3232505_3233456_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40834.1|3233900_3234212_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZX40835.1|3234211_3234742_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40836.1|3234904_3235855_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40837.1|3235953_3236904_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40838.1|3237193_3237658_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZX40839.1|3237672_3239178_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZX40840.1|3239431_3241039_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX40841.1|3241094_3242000_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX40842.1|3242440_3243391_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40843.1|3243489_3244440_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	3266165	3304580	4105338	transposase,holin	Tupanvirus(16.67%)	36	NA	NA
AZX40865.1|3266165_3266501_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZX40866.1|3266500_3267343_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZX40867.1|3267441_3268392_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40868.1|3268456_3269428_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40869.1|3269491_3270511_-	histone deacetylase family protein	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZX41742.1|3270512_3271886_-	MFS transporter	NA	NA	NA	NA	NA
AZX40870.1|3272163_3272844_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZX40871.1|3272856_3274983_+	lytic transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.5e-14
AZX40872.1|3274979_3276074_+	CCA-adding enzyme	NA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZX40873.1|3276088_3277348_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX40874.1|3277367_3279092_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	9.5e-49
AZX40875.1|3279330_3280083_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZX40876.1|3280221_3281172_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41743.1|3281484_3282963_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZX40877.1|3282969_3284079_-	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZX40878.1|3284090_3284771_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZX40879.1|3284792_3285548_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX41744.1|3285683_3286568_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX40880.1|3286655_3287237_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40881.1|3287329_3287452_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40882.1|3287497_3287797_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZX41745.1|3287948_3288374_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40883.1|3290580_3291084_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZX40884.1|3291099_3292050_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40885.1|3292036_3292234_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40886.1|3292577_3293351_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40887.1|3293483_3294494_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40888.1|3294645_3296301_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZX40889.1|3296355_3296697_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZX40890.1|3296710_3298150_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX40891.1|3298282_3299098_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40892.1|3299116_3299305_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40893.1|3299291_3300242_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40894.1|3301629_3302577_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40895.1|3302803_3303544_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40896.1|3303629_3304580_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	3379987	3433728	4105338	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
AZX40948.1|3379987_3380938_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40949.1|3381342_3381987_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AZX40950.1|3382011_3382596_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AZX40951.1|3382696_3383314_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AZX40952.1|3383316_3385032_-	urease subunit alpha	NA	NA	NA	NA	NA
AZX40953.1|3385028_3385337_-	urease subunit beta	NA	NA	NA	NA	NA
AZX40954.1|3385353_3385989_-	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZX40955.1|3386015_3386318_-	urease subunit gamma	NA	NA	NA	NA	NA
AZX40956.1|3386418_3387273_-	urease accessory protein UreD	NA	NA	NA	NA	NA
AZX40957.1|3387854_3388127_+	MerR family DNA-binding transcriptional regulator	NA	NA	NA	NA	NA
AZX40958.1|3388544_3388952_-	GFA family protein	NA	NA	NA	NA	NA
AZX40959.1|3389321_3390116_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40960.1|3390216_3391452_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZX40961.1|3391520_3392537_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40962.1|3392533_3393925_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZX40963.1|3393921_3395118_+	MFS transporter	NA	NA	NA	NA	NA
AZX40964.1|3395114_3396653_-	SpoVR family protein	NA	NA	NA	NA	NA
AZX40965.1|3396649_3397909_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40966.1|3399849_3400800_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40967.1|3401566_3402661_-	CoA transferase	NA	NA	NA	NA	NA
AZX40968.1|3402653_3403988_-	CoA ligase	NA	NA	NA	NA	NA
AZX40969.1|3403941_3404625_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX40970.1|3404650_3405814_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX40971.1|3405810_3406812_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX40972.1|3406811_3407684_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX40973.1|3407680_3408430_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZX40974.1|3408426_3409218_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZX40975.1|3409214_3410354_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX40976.1|3410662_3411415_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX40977.1|3411448_3412231_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX40978.1|3412234_3412624_+	DNA-binding protein	NA	NA	NA	NA	NA
AZX40979.1|3413763_3414627_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX40980.1|3414662_3415751_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40981.1|3415747_3416698_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40982.1|3416684_3417053_-	hypothetical protein	NA	NA	NA	NA	NA
AZX40983.1|3417051_3420030_+	hypothetical protein	NA	NA	NA	NA	NA
AZX40984.1|3420956_3421835_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZX40985.1|3423783_3424734_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX40986.1|3424730_3425198_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZX40987.1|3425240_3426011_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX40988.1|3426031_3426832_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZX40989.1|3426842_3428252_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZX40990.1|3428346_3429132_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZX41749.1|3429371_3430388_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX40991.1|3430495_3430888_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZX40992.1|3431025_3431706_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZX40993.1|3431710_3432709_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX40994.1|3432777_3433728_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	3439883	3499183	4105338	transposase,tRNA	Acinetobacter_phage(27.27%)	48	NA	NA
AZX40998.1|3439883_3441647_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZX40999.1|3441758_3442637_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZX41000.1|3442749_3443565_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZX41001.1|3443568_3443820_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AZX41750.1|3443904_3444921_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZX41002.1|3445251_3445473_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41003.1|3447833_3448751_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX41004.1|3449248_3450457_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX41005.1|3450536_3452108_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX41006.1|3452225_3453161_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZX41007.1|3453349_3454294_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZX41008.1|3454362_3454578_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41009.1|3454861_3460579_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZX41010.1|3460584_3461712_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZX41011.1|3461767_3462394_+	aminotransferase	NA	NA	NA	NA	NA
AZX41751.1|3462665_3463682_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZX41012.1|3463777_3464488_-	oxidoreductase	NA	NA	NA	NA	NA
AZX41752.1|3464484_3465474_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX41013.1|3465605_3467201_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZX41014.1|3467203_3467941_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41015.1|3468096_3468969_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZX41016.1|3469237_3470458_+	MFS transporter	NA	NA	NA	NA	NA
AZX41017.1|3470454_3471114_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZX41018.1|3471185_3471818_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZX41019.1|3471847_3472366_+	flavin reductase	NA	NA	NA	NA	NA
AZX41020.1|3472376_3473486_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZX41021.1|3473532_3474387_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZX41022.1|3474388_3475291_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41023.1|3476513_3477464_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41024.1|3479220_3480210_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41025.1|3480385_3481174_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZX41026.1|3481170_3482202_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZX41027.1|3482220_3482784_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZX41028.1|3482839_3484360_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZX41029.1|3484623_3485328_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZX41030.1|3485335_3486073_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZX41031.1|3486178_3486553_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZX41032.1|3486595_3487885_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41033.1|3487881_3489051_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZX41034.1|3489047_3489887_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZX41035.1|3489946_3490882_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZX41036.1|3490894_3491845_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41037.1|3491943_3492906_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZX41038.1|3492937_3493297_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZX41039.1|3493421_3494324_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZX41040.1|3494325_3496098_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZX41041.1|3496132_3496909_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX41042.1|3498232_3499183_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 30
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	3514121	3572194	4105338	transposase,tRNA	Planktothrix_phage(12.5%)	47	NA	NA
AZX41054.1|3514121_3515072_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41055.1|3515200_3516334_-	peptidase	NA	NA	NA	NA	NA
AZX41056.1|3516377_3517283_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZX41057.1|3517285_3518986_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZX41058.1|3518982_3519903_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX41059.1|3519910_3520888_-	ABC transporter permease	NA	NA	NA	NA	NA
AZX41060.1|3520946_3521981_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZX41061.1|3523955_3524192_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41062.1|3524318_3525182_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZX41063.1|3525270_3526092_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX41064.1|3526171_3526909_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZX41065.1|3526905_3527898_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZX41066.1|3528011_3528674_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41067.1|3528718_3529867_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZX41068.1|3532190_3533141_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41069.1|3533481_3534432_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41070.1|3534530_3535481_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41071.1|3535777_3536275_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41072.1|3536317_3538093_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZX41755.1|3538139_3538967_+	copper resistance protein B	NA	NA	NA	NA	NA
AZX41073.1|3538973_3539708_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZX41074.1|3540877_3541672_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41075.1|3541961_3542552_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZX41076.1|3542585_3543914_-	amidase	NA	NA	NA	NA	NA
AZX41077.1|3543988_3545134_-	transporter	NA	NA	NA	NA	NA
AZX41078.1|3545245_3546244_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41079.1|3546206_3546641_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZX41080.1|3548157_3549042_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX41081.1|3549038_3550244_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZX41082.1|3550240_3551101_-	endonuclease	NA	NA	NA	NA	NA
AZX41083.1|3551213_3553004_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZX41084.1|3553044_3553710_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZX41085.1|3553710_3554019_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZX41756.1|3554184_3555471_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41086.1|3556904_3557855_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41087.1|3559806_3561021_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZX41088.1|3561126_3562116_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZX41089.1|3562112_3562721_+	hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZX41090.1|3562733_3563363_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZX41091.1|3563359_3563980_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZX41092.1|3564011_3564803_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZX41093.1|3565645_3566110_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZX41094.1|3566128_3567055_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZX41095.1|3567108_3568395_-	cytochrome c	NA	NA	NA	NA	NA
AZX41096.1|3569325_3570198_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZX41097.1|3570194_3571145_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZX41098.1|3571243_3572194_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 32
CP025363	Bordetella pertussis strain H902 chromosome, complete genome	4105338	4004406	4069318	4105338	transposase	Planktothrix_phage(40.0%)	58	NA	NA
AZX41486.1|4004406_4004892_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41487.1|4005110_4006091_+	protein BugT	NA	NA	NA	NA	NA
AZX41488.1|4006357_4007167_+	Pertussis toxin subunit 1	NA	NA	NA	NA	NA
AZX41489.1|4007206_4007887_+	Pertussis toxin subunit 2	NA	NA	NA	NA	NA
AZX41490.1|4007880_4008339_+	pertussis toxin subunit 4	NA	NA	NA	NA	NA
AZX41491.1|4008350_4008713_+	Pertussis toxin subunit 5	NA	NA	NA	NA	NA
AZX41492.1|4008795_4009479_+	Pertussis toxin subunit 3	NA	NA	NA	NA	NA
AZX41493.1|4009534_4009843_+	type IV secretion protein A	NA	NA	NA	NA	NA
AZX41494.1|4009861_4010176_+	type IV secretion protein B	NA	NA	NA	NA	NA
AZX41495.1|4010172_4012647_+	type IV secretion system protein PtlC	NA	NA	NA	NA	NA
AZX41496.1|4012654_4014046_+	type IV secretion system protein PtlD	NA	NA	NA	NA	NA
AZX41497.1|4014042_4014228_+	type IV secretion protein I	NA	NA	NA	NA	NA
AZX41498.1|4014206_4014908_+	type IV secretion protein E	NA	NA	NA	NA	NA
AZX41499.1|4014904_4015726_+	type IV secretion system protein PtlF	NA	NA	NA	NA	NA
AZX41778.1|4015706_4016831_+	type IV secretion system protein PtlG	NA	NA	NA	NA	NA
AZX41500.1|4016823_4017843_+	type IV secretion protein H	NA	NA	NA	NA	NA
AZX41501.1|4018048_4019083_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZX41779.1|4019183_4019975_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZX41502.1|4020057_4020432_+	DUF1232 domain-containing protein	NA	NA	NA	NA	NA
AZX41503.1|4020409_4021819_+	DUF2868 domain-containing protein	NA	NA	NA	NA	NA
AZX41504.1|4021811_4023194_+	DUF3482 domain-containing protein	NA	A0A0R6PHS5	Moraxella_phage	38.9	9.9e-57
AZX41505.1|4023528_4025133_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZX41506.1|4025168_4026182_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX41507.1|4026192_4027119_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX41508.1|4027509_4028460_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41509.1|4028629_4029856_+	bifunctional glutamate N-acetyltransferase/amino-acid N-acetyltransferase	NA	NA	NA	NA	NA
AZX41510.1|4030055_4030922_+	DUF815 domain-containing protein	NA	NA	NA	NA	NA
AZX41511.1|4030914_4031877_+	NUDIX domain-containing protein	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZX41512.1|4031977_4032928_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41513.1|4033026_4033977_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41514.1|4034075_4035026_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZX41515.1|4035022_4036516_-	RND transporter	NA	NA	NA	NA	NA
AZX41516.1|4036512_4039620_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZX41517.1|4039616_4042685_-	multidrug transporter subunit MdtB	NA	NA	NA	NA	NA
AZX41518.1|4042681_4043932_-	multidrug transporter subunit MdtA	NA	NA	NA	NA	NA
AZX41519.1|4044112_4044874_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZX41520.1|4044906_4045557_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZX41521.1|4045559_4046399_-	prepilin peptidase	NA	NA	NA	NA	NA
AZX41522.1|4046639_4047383_+	hypothetical protein	NA	NA	NA	NA	NA
AZX41523.1|4047465_4047813_-	LuxR family transcriptional regulator	NA	NA	NA	NA	NA
AZX41524.1|4047910_4048753_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZX41525.1|4048797_4049685_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZX41526.1|4049711_4049900_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZX41527.1|4049997_4051455_+	MFS transporter	NA	NA	NA	NA	NA
AZX41528.1|4051441_4052968_+	glycerol kinase	NA	NA	NA	NA	NA
AZX41529.1|4052986_4053454_-	hypothetical protein	NA	NA	NA	NA	NA
AZX41530.1|4053453_4054476_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZX41531.1|4054596_4055337_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZX41532.1|4055391_4056492_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX41533.1|4056493_4057684_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZX41534.1|4057803_4058820_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZX41535.1|4059138_4059810_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZX41536.1|4059806_4060715_+	ABC transporter permease	NA	NA	NA	NA	NA
AZX41537.1|4060926_4061574_+	chemoreceptor glutamine deamidase CheD	NA	NA	NA	NA	NA
AZX41538.1|4065425_4066502_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZX41539.1|4066512_4067322_-	transcriptional regulator	NA	NA	NA	NA	NA
AZX41540.1|4067411_4068185_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZX41541.1|4068367_4069318_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
