The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	27282	79600	4108444	tRNA,transposase,protease	Synechococcus_phage(25.0%)	47	NA	NA
AZW69964.1|27282_28233_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW69965.1|28314_28650_-	CoA transferase	NA	NA	NA	NA	NA
AZW69966.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZW69967.1|29141_30368_-	thiolase family protein	NA	NA	NA	NA	NA
AZW69968.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZW73323.1|31069_31978_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW69969.1|32163_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW69970.1|33048_34470_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW69971.1|35571_36762_-	MFS transporter	NA	NA	NA	NA	NA
AZW69972.1|36948_37923_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZW69973.1|37924_40063_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZW69974.1|40059_40599_+	D-glycero-beta-D-manno-heptose 1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZW69975.1|40602_41331_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZW69976.1|41317_42211_+	M48 family peptidase	NA	NA	NA	NA	NA
AZW69977.1|42281_42677_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZW69978.1|42686_43217_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZW69979.1|43345_43645_-	DUF1974 domain-containing protein	NA	NA	NA	NA	NA
AZW69980.1|45111_45747_+	hypothetical protein	NA	NA	NA	NA	NA
AZW69981.1|45718_45955_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZW69982.1|46082_46976_+	hypothetical protein	NA	NA	NA	NA	NA
AZW69983.1|48145_49393_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZW69984.1|49389_50004_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZW69985.1|51131_52388_+	MFS transporter	NA	NA	NA	NA	NA
AZW69986.1|53619_54354_-	aspartate/glutamate racemase family protein	NA	NA	NA	NA	NA
AZW69987.1|54359_54950_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZW69988.1|54974_55664_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW69989.1|55660_56422_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW69990.1|56501_57401_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW69991.1|57494_58445_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW69992.1|59245_60472_-	type II toxin-antitoxin system HipA family toxin	NA	NA	NA	NA	NA
AZW69993.1|60471_60891_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW69994.1|61074_62016_-	hypothetical protein	NA	NA	NA	NA	NA
AZW69995.1|62439_63276_-	hypothetical protein	NA	NA	NA	NA	NA
AZW69996.1|63470_64052_-|protease	protease	protease	NA	NA	NA	NA
AZW69997.1|64064_64382_-	ferredoxin	NA	NA	NA	NA	NA
AZW69998.1|64485_65544_-	oxidoreductase	NA	NA	NA	NA	NA
AZW69999.1|65578_66850_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZW70000.1|67479_68661_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70001.1|70125_70440_+|transposase	transposase	transposase	NA	NA	NA	NA
AZW70002.1|71632_73540_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZW70003.1|73701_74322_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZW70004.1|74353_74935_-	1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZW70005.1|75023_75275_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73324.1|75276_76026_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70006.1|76224_77634_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZW70007.1|77630_78581_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73325.1|78655_79600_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 2
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	107423	175247	4108444	tRNA,transposase	Bacillus_phage(22.22%)	58	NA	NA
AZW70035.1|107423_108374_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70036.1|109273_110467_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZW70037.1|110548_111178_-	thiol:disulfide interchange protein DsbA	NA	NA	NA	NA	NA
AZW70038.1|111239_111923_-	SPOR domain-containing protein	NA	NA	NA	NA	NA
AZW70039.1|111932_113615_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZW73326.1|113902_114250_+	DUF1840 domain-containing protein	NA	NA	NA	NA	NA
AZW70040.1|114340_114658_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70041.1|114940_115957_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW70042.1|116032_116833_-	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZW70043.1|116829_117705_-	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZW70044.1|117715_119008_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70045.1|119050_120091_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZW70046.1|120196_121018_-	phosphodiesterase	NA	NA	NA	NA	NA
AZW70047.1|121118_122069_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70048.1|122166_123072_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	31.7	9.8e-21
AZW70049.1|123068_123902_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW73327.1|124738_125749_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW73328.1|125745_126135_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70050.1|127028_128282_+	amidase	NA	NA	NA	NA	NA
AZW70051.1|128372_130073_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
AZW70052.1|130499_131147_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70053.1|131145_132585_+	RNA polymerase sigma-54 factor	NA	NA	NA	NA	NA
AZW70054.1|132677_132980_+	bacterioferritin-associated ferredoxin	NA	NA	NA	NA	NA
AZW70055.1|133007_133886_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70056.1|135152_136103_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70057.1|136521_138030_-	threonine ammonia-lyase, biosynthetic	NA	NA	NA	NA	NA
AZW70058.1|138776_142739_+	FAD-linked oxidase	NA	NA	NA	NA	NA
AZW70059.1|142791_143574_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70060.1|143661_144885_-	CoA transferase	NA	NA	NA	NA	NA
AZW73329.1|144868_145801_-	lipase	NA	NA	NA	NA	NA
AZW70061.1|145806_146619_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW70062.1|146639_147083_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70063.1|147101_147860_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73330.1|147932_148856_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70064.1|149022_149805_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70065.1|150571_151552_-	carboxylase	NA	NA	NA	NA	NA
AZW70066.1|151548_152277_-	allophanate hydrolase subunit 1	NA	NA	NA	NA	NA
AZW70067.1|152301_152733_-	glyoxalase	NA	NA	NA	NA	NA
AZW70068.1|152834_153710_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70069.1|153760_154981_-	phosphoglycerate dehydrogenase	NA	A0A1V0SBV6	Catovirus	42.6	3.2e-91
AZW70070.1|155064_155526_-	metal-binding protein	NA	NA	NA	NA	NA
AZW70071.1|155631_157029_-	two-component sensor histidine kinase	NA	NA	NA	NA	NA
AZW70072.1|157025_157703_-	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	35.2	1.5e-29
AZW70073.1|157758_159069_-	phosphate regulon sensor histidine kinase PhoR	NA	A0A1V0SGX0	Hokovirus	25.5	6.2e-16
AZW70074.1|159080_159779_-	phosphate regulon transcriptional regulatory protein PhoB	NA	W8CYM9	Bacillus_phage	37.1	8.6e-33
AZW70075.1|159942_160719_+	ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE	NA	NA	NA	NA	NA
AZW70076.1|160884_161907_+	Tim44 domain-containing protein	NA	NA	NA	NA	NA
AZW70077.1|162135_162771_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70078.1|162767_164330_+	ubiquinone biosynthesis regulatory protein kinase UbiB	NA	A0A2N9QVT9	Dishui_lake_phycodnavirus	28.7	1.0e-33
AZW70079.1|164888_165839_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70080.1|167282_168185_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70081.1|168162_168792_-	LemA family protein	NA	NA	NA	NA	NA
AZW70082.1|169122_170505_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.5	5.3e-42
AZW70083.1|170538_171168_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZW70084.1|171216_172824_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZW70085.1|172848_173532_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73331.1|173613_174090_-	bacterioferritin	NA	NA	NA	NA	NA
AZW70086.1|174296_175247_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	215658	266517	4108444	tRNA,transposase,protease	uncultured_Caudovirales_phage(33.33%)	40	NA	NA
AZW70119.1|215658_218454_-|protease	serine protease autotransporter SphB1	protease	NA	NA	NA	NA
AZW70120.1|219047_221990_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZW70121.1|222061_222781_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZW70122.1|222819_223368_-	N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZW70123.1|223522_224422_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZW70124.1|224446_225397_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70125.1|225383_225563_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70126.1|225615_226311_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70127.1|226327_227740_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZW70128.1|227852_229283_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZW70129.1|229324_231238_-	phosphomethylpyrimidine synthase	NA	NA	NA	NA	NA
AZW70130.1|231556_232123_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
AZW70131.1|232213_233215_+	HindIII family type II restriction endonuclease	NA	NA	NA	NA	NA
AZW70132.1|233329_234280_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70133.1|234366_235317_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70134.1|235313_236264_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70135.1|236362_237160_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZW70136.1|238109_238520_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZW70137.1|239541_240285_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70138.1|240328_241372_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70139.1|241542_243645_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70140.1|245055_246012_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70141.1|246030_246522_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZW70142.1|246518_247874_-	polynucleotide adenylyltransferase PcnB	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZW70143.1|247874_248573_-	HAD-IB family hydrolase	NA	NA	NA	NA	NA
AZW70144.1|248569_249271_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZW70145.1|249523_250573_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZW70146.1|250678_251620_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZW70147.1|251616_253506_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZW70148.1|253592_254231_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73334.1|254373_255618_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.1e-17
AZW70149.1|255689_256226_-|tRNA	bifunctional alanine racemase/tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZW70150.1|256377_257769_+	class II fumarate hydratase	NA	NA	NA	NA	NA
AZW70151.1|257785_258766_-	AEC family transporter	NA	NA	NA	NA	NA
AZW70152.1|258901_259885_+	tripartite tricarboxylate transporter substrate binding protein BugE	NA	NA	NA	NA	NA
AZW70153.1|259949_260849_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70154.1|260955_262710_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZW70155.1|262717_263842_-	CoA transferase	NA	NA	NA	NA	NA
AZW70156.1|263855_264836_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70157.1|265566_266517_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	277133	331327	4108444	transposase,protease	Pithovirus(14.29%)	53	NA	NA
AZW73335.1|277133_278084_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70166.1|278360_278522_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZW70167.1|278529_278670_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70168.1|279188_279638_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZW70169.1|279647_280259_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZW70170.1|280417_281272_-	cytochrome c1	NA	NA	NA	NA	NA
AZW70171.1|281291_282674_-	cytochrome b	NA	NA	NA	NA	NA
AZW70172.1|282738_283380_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZW70173.1|283519_283978_+	large conductance mechanosensitive channel protein MscL	NA	NA	NA	NA	NA
AZW70174.1|284002_284779_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZW73336.1|284832_285969_+	PDZ domain-containing protein	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZW70175.1|285965_286916_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70176.1|287014_287641_-	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZW70177.1|287663_288590_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
AZW70178.1|288598_290185_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70179.1|290181_291186_-	alpha/beta hydrolase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
AZW70180.1|291385_292246_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW70181.1|292277_293279_-	2-isopropylmalate synthase	NA	NA	NA	NA	NA
AZW70182.1|293349_294159_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW70183.1|294236_296096_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZW70184.1|296224_297427_-	MFS transporter	NA	NA	NA	NA	NA
AZW70185.1|297540_298422_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70186.1|299924_300485_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
AZW70187.1|300544_301495_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70188.1|301686_301947_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70189.1|302062_303013_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70190.1|303009_304008_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70191.1|304050_304554_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70192.1|304557_305448_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW70193.1|305670_306834_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70194.1|306930_307851_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70195.1|307854_308820_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70196.1|308816_309611_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	23.5	2.6e-09
AZW70197.1|309604_310309_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.2	1.1e-16
AZW70198.1|313672_314536_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW70199.1|314538_315708_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW70200.1|315748_317398_+	2-aminobenzoate-CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	31.2	2.6e-56
AZW70201.1|317399_317834_+	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZW70202.1|317858_318260_+	RidA family protein	NA	NA	NA	NA	NA
AZW70203.1|318353_319979_-	DUF342 domain-containing protein	NA	NA	NA	NA	NA
AZW70204.1|320218_321502_-	glutamate-1-semialdehyde 2,1-aminomutase	NA	NA	NA	NA	NA
AZW70205.1|321518_322172_-	thiamine phosphate synthase	NA	NA	NA	NA	NA
AZW70206.1|322168_323017_-	hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	NA	NA	NA	NA	NA
AZW73337.1|323133_323298_+	rubredoxin	NA	NA	NA	NA	NA
AZW70207.1|323313_323991_+	YqgE/AlgH family protein	NA	NA	NA	NA	NA
AZW70208.1|323983_324385_+	Holliday junction resolvase RuvX	NA	NA	NA	NA	NA
AZW70209.1|324398_325352_+	aspartate carbamoyltransferase catalytic subunit	NA	A7RB08	Paramecium_bursaria_Chlorella_virus	35.8	2.5e-30
AZW70210.1|325348_326524_+	dihydroorotase	NA	NA	NA	NA	NA
AZW70211.1|326643_327384_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZW70212.1|327420_328254_-	bis(5'-nucleosyl)-tetraphosphatase (symmetrical)	NA	NA	NA	NA	NA
AZW70213.1|328250_329519_-	LPS export ABC transporter permease LptG	NA	NA	NA	NA	NA
AZW70214.1|329525_330254_-	monofunctional biosynthetic peptidoglycan transglycosylase	NA	NA	NA	NA	NA
AZW70215.1|330376_331327_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	390849	448358	4108444	transposase	Orpheovirus(14.29%)	50	NA	NA
AZW70274.1|390849_391800_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70275.1|391936_392854_+	reductase	NA	NA	NA	NA	NA
AZW70276.1|392850_393099_+	glutaredoxin family protein	NA	NA	NA	NA	NA
AZW70277.1|393095_394301_+	CoA transferase	NA	NA	NA	NA	NA
AZW70278.1|394373_395369_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70279.1|395391_396612_-	CoA transferase	NA	NA	NA	NA	NA
AZW70280.1|396608_397253_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70281.1|398983_399793_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW73342.1|400010_401051_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	6.1e-59
AZW70282.1|401149_402133_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70283.1|402059_402761_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70284.1|402809_403580_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZW70285.1|403576_404818_-	CoA transferase	NA	NA	NA	NA	NA
AZW70286.1|404922_406629_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZW70287.1|406625_407522_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70288.1|407562_409152_-	sulfurtransferase	NA	NA	NA	NA	NA
AZW70289.1|409201_410194_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70290.1|410262_410862_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73343.1|411322_412300_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70291.1|412378_413329_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70292.1|413417_414332_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZW70293.1|414328_414988_+	LysE family translocator	NA	NA	NA	NA	NA
AZW70294.1|415077_416001_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZW70295.1|416006_416462_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70296.1|416458_417562_-	ChbG/HpnK family deacetylase	NA	NA	NA	NA	NA
AZW73344.1|417481_417790_+	GtrA family protein	NA	NA	NA	NA	NA
AZW70297.1|417749_419369_-	phospholipid carrier-dependent glycosyltransferase	NA	NA	NA	NA	NA
AZW70298.1|419365_420424_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AZW70299.1|420553_421048_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZW70300.1|421140_422118_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70301.1|422313_423519_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZW70302.1|423515_425027_+	TRAP transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW73345.1|425042_426356_-	short-chain fatty acids transporter	NA	NA	NA	NA	NA
AZW70303.1|426546_426726_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70304.1|427135_427870_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZW70305.1|430314_431265_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70306.1|431396_431795_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AZW70307.1|432205_432676_-	universal stress protein	NA	NA	NA	NA	NA
AZW70308.1|432764_433109_-	TIGR01244 family phosphatase	NA	NA	NA	NA	NA
AZW70309.1|433208_434609_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZW70310.1|436397_436916_-	MgtC/SapB family protein	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AZW70311.1|437026_437782_+	TerC family protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AZW70312.1|437977_439210_+	CoA transferase	NA	NA	NA	NA	NA
AZW70313.1|439202_439988_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW70314.1|440054_441026_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70315.1|441036_442014_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70316.1|442139_443312_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW70317.1|443338_444367_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW70318.1|444432_445626_+	acetyl-CoA C-acyltransferase	NA	NA	NA	NA	NA
AZW70319.1|447407_448358_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	636782	736894	4108444	terminase,tRNA,tail,transposase	uncultured_Caudovirales_phage(13.33%)	108	NA	NA
AZW70482.1|636782_637733_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70483.1|637831_638632_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70484.1|638693_639077_+	thioredoxin	NA	NA	NA	NA	NA
AZW70485.1|639088_640522_-	ATP-dependent helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZW70486.1|640728_641058_-	AzlD domain-containing protein	NA	NA	NA	NA	NA
AZW73353.1|641060_641729_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70487.1|641992_642913_+	branched-chain amino acid transaminase	NA	NA	NA	NA	NA
AZW70488.1|642959_643172_+	zinc-finger domain-containing protein	NA	NA	NA	NA	NA
AZW70489.1|643194_643617_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZW70490.1|643633_644734_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW70491.1|644830_646348_-	peptidase	NA	NA	NA	NA	NA
AZW70492.1|646423_647263_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZW70493.1|647284_648166_-	cytochrome c oxidase assembly protein	NA	NA	NA	NA	NA
AZW70494.1|648247_649342_-	porin	NA	NA	NA	NA	NA
AZW70495.1|649635_650586_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73354.1|650660_651602_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70496.1|651685_652045_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70497.1|652426_653464_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70498.1|653780_655121_+	peptidase M24 family protein	NA	NA	NA	NA	NA
AZW70499.1|655130_655583_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70500.1|655679_656861_+	monooxygenase	NA	NA	NA	NA	NA
AZW70501.1|656920_657952_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZW70502.1|657992_658232_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZW70503.1|658301_659891_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase PurH	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZW70504.1|659890_660439_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZW70505.1|660519_661092_+	Holliday junction branch migration protein RuvA	NA	NA	NA	NA	NA
AZW70506.1|661110_662022_-	complex I NDUFA9 subunit family protein	NA	NA	NA	NA	NA
AZW70507.1|662095_663064_-	threonine/serine dehydratase	NA	NA	NA	NA	NA
AZW70508.1|663186_664260_+	Holliday junction branch migration DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZW70509.1|664264_666085_-	DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZW70510.1|667199_667535_+	ASCH domain-containing protein	NA	NA	NA	NA	NA
AZW70511.1|667668_668319_+	carbonic anhydrase	NA	NA	NA	NA	NA
AZW70512.1|668340_669759_-	amidase	NA	NA	NA	NA	NA
AZW70513.1|669828_670584_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73355.1|670552_671311_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70514.1|671321_672203_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70515.1|672219_672927_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZW70516.1|672929_673688_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZW70517.1|673897_675640_+	sulfite reductase	NA	NA	NA	NA	NA
AZW70518.1|675632_676157_+	DUF934 domain-containing protein	NA	NA	NA	NA	NA
AZW70519.1|676196_676991_-	MetQ/NlpA family ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70520.1|677158_678232_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70521.1|678330_679281_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70522.1|679532_679745_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73356.1|679810_680422_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZW70523.1|680901_681222_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70524.1|681214_681913_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70525.1|681927_682149_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70526.1|682166_683117_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73357.1|683792_684242_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	5.2e-39
AZW70527.1|684228_685506_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZW70528.1|685508_686927_+	DUF4055 domain-containing protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZW73358.1|686955_688011_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	50.6	2.6e-97
AZW70529.1|688016_688259_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZW70530.1|688381_688984_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZW70531.1|689412_690363_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70532.1|690380_691028_+	hypothetical protein	NA	R9TJ64	Synechococcus_phage	71.1	2.7e-65
AZW70533.1|691037_691289_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70534.1|691351_691834_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZW70535.1|691835_692036_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70536.1|692035_692431_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZW70537.1|692427_692826_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZW70538.1|692822_693245_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70539.1|693252_693753_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZW70540.1|694007_694526_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZW70541.1|694535_694865_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZW70542.1|694882_695173_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZW70543.1|695198_697811_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZW70544.1|697820_698180_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70545.1|698247_698781_+	DUF1833 domain-containing protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZW70546.1|698777_699167_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZW70547.1|699159_703116_+	DUF1983 domain-containing protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
AZW70548.1|703120_703537_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70549.1|703755_704019_+	hypothetical protein	NA	A0A1B0V3F2	Roseobacter_phage	41.8	7.2e-09
AZW70550.1|704018_704831_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70551.1|704835_705078_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70552.1|705056_705608_+	lysozyme	NA	NA	NA	NA	NA
AZW70553.1|705589_706123_+	DUF2514 domain-containing protein	NA	NA	NA	NA	NA
AZW70554.1|706119_706401_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70555.1|706743_706944_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70556.1|706950_707622_-	SOS response-associated peptidase	NA	Q5QF62	Pseudomonas_virus	39.9	4.7e-36
AZW70557.1|707977_708664_-	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW70558.1|708644_709217_-	RNA pyrophosphohydrolase	NA	NA	NA	NA	NA
AZW70559.1|709282_711013_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZW70560.1|711065_711494_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZW70561.1|711496_712177_+	protein TolQ	NA	NA	NA	NA	NA
AZW70562.1|712176_712635_+	protein TolR	NA	NA	NA	NA	NA
AZW70563.1|712671_713646_+	cell envelope integrity protein TolA	NA	NA	NA	NA	NA
AZW70564.1|713662_714979_+	protein TolB	NA	NA	NA	NA	NA
AZW70565.1|715010_715508_+	peptidoglycan-associated lipoprotein Pal	NA	NA	NA	NA	NA
AZW70566.1|715594_716284_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZW70567.1|716283_717333_+	iron ABC transporter permease	NA	NA	NA	NA	NA
AZW70568.1|717329_718124_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZW70569.1|718292_718643_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70570.1|718618_719176_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70571.1|720100_720319_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70572.1|720305_721256_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73359.1|723534_724623_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70573.1|724625_726068_-	pyruvate kinase	NA	NA	NA	NA	NA
AZW70574.1|726172_727318_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
AZW70575.1|727349_728147_-	ribosomal RNA small subunit methyltransferase A	NA	NA	NA	NA	NA
AZW70576.1|728171_729731_-	chaperone SurA	NA	NA	NA	NA	NA
AZW70577.1|729727_732100_-	LPS-assembly protein LptD	NA	NA	NA	NA	NA
AZW70578.1|732209_733313_+	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AZW70579.1|733312_734005_+	nucleotidyltransferase family protein	NA	NA	NA	NA	NA
AZW70580.1|734148_734850_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70581.1|734834_735212_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AZW70582.1|735943_736894_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 7
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	748181	821343	4108444	transposase	Streptococcus_phage(16.67%)	58	NA	NA
AZW70593.1|748181_749132_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70594.1|749786_750884_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZW70595.1|750917_752183_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZW70596.1|752340_753291_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70597.1|753534_754125_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZW73360.1|754140_756585_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZW70598.1|756704_757676_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70599.1|757807_758332_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZW70600.1|758291_759242_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70601.1|759463_761659_-	DNA methylase	NA	NA	NA	NA	NA
AZW70602.1|761731_762139_-	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZW70603.1|762261_763212_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70604.1|763327_763771_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW70605.1|763833_764628_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW70606.1|764793_765930_-	glutamate 5-kinase	NA	A0A1X9I5D0	Streptococcus_phage	44.8	5.8e-63
AZW70607.1|766000_767134_-	GTPase ObgE	NA	NA	NA	NA	NA
AZW70608.1|767283_767544_-	50S ribosomal protein L27	NA	NA	NA	NA	NA
AZW70609.1|767577_767889_-	50S ribosomal protein L21	NA	NA	NA	NA	NA
AZW70610.1|768313_769462_+	fumarylacetoacetate hydrolase	NA	NA	NA	NA	NA
AZW70611.1|769576_770542_+	octaprenyl diphosphate synthase	NA	NA	NA	NA	NA
AZW70612.1|770810_771677_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70613.1|771807_773856_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZW70614.1|773873_775871_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZW70615.1|775905_777243_+	FAD-binding oxidoreductase	NA	NA	NA	NA	NA
AZW70616.1|777505_779359_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70617.1|779413_780895_+	NAD-dependent succinate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZW70618.1|780910_781498_-	cyclolysin-activating lysine-acyltransferase CyaC	NA	NA	NA	NA	NA
AZW73361.1|781580_781760_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70619.1|781946_787067_+	bifunctional adenylate cyclase toxin/hemolysin CyaA	NA	NA	NA	NA	NA
AZW70620.1|787144_789283_+	cyclolysin secretion/processing ATP-binding protein CyaB	NA	W8CYL7	Bacillus_phage	29.2	2.7e-45
AZW70621.1|789279_790602_+	protein CyaD	NA	NA	NA	NA	NA
AZW70622.1|790603_792028_+	protein CyaE	NA	NA	NA	NA	NA
AZW70623.1|792118_793027_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70624.1|793091_794006_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70625.1|794843_795527_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70626.1|795543_796287_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	42.4	3.5e-32
AZW70627.1|796316_797177_+	aminotransferase	NA	NA	NA	NA	NA
AZW70628.1|797184_797751_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70629.1|797839_798796_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70630.1|798840_799593_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW70631.1|799589_801335_-	acetolactate synthase catalytic subunit	NA	NA	NA	NA	NA
AZW70632.1|801419_802154_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70633.1|802470_803493_+	autotransporter domain-containing protein	NA	NA	NA	NA	NA
AZW70634.1|803508_804231_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70635.1|804375_805383_-	zinc-binding dehydrogenase	NA	NA	NA	NA	NA
AZW70636.1|805423_806956_-	long-chain fatty acid--CoA ligase	NA	NA	NA	NA	NA
AZW70637.1|806952_808071_-	DUF2817 domain-containing protein	NA	NA	NA	NA	NA
AZW70638.1|808067_808850_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW70639.1|808861_809725_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	38.9	9.6e-34
AZW73362.1|809743_810841_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70640.1|810909_811836_-	VOC family protein	NA	NA	NA	NA	NA
AZW70641.1|811870_813565_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZW70642.1|813764_814700_-	mechanosensitive ion channel family protein	NA	NA	NA	NA	NA
AZW70643.1|814805_815756_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70644.1|815854_816511_-	DUF4136 domain-containing protein	NA	NA	NA	NA	NA
AZW70645.1|816658_819367_+	aminopeptidase N	NA	A0A0P0IY26	Acinetobacter_phage	24.0	2.8e-15
AZW70646.1|819376_820396_+	fructose 1,6-bisphosphatase	NA	A0A1V0SKX4	Klosneuvirus	35.7	1.5e-49
AZW70647.1|820392_821343_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	854090	903354	4108444	transposase,holin	Vibrio_phage(33.33%)	40	NA	NA
AZW70676.1|854090_855041_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73363.1|855013_855613_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70677.1|855614_856049_+	PaaI family thioesterase	NA	NA	NA	NA	NA
AZW70678.1|856045_856480_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70679.1|856463_857267_-	phosphatase PAP2 family protein	NA	NA	NA	NA	NA
AZW70680.1|857283_858099_-	DNA repair exonuclease	NA	NA	NA	NA	NA
AZW70681.1|858095_858911_-	diacylglycerol kinase	NA	NA	NA	NA	NA
AZW70682.1|859057_859759_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70683.1|859786_861745_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZW70684.1|861827_862778_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70685.1|862998_863667_+	transcriptional regulator	NA	NA	NA	NA	NA
AZW70686.1|863790_864897_+	MexH family multidrug efflux RND transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZW70687.1|864909_868023_+	MexW/MexI family multidrug efflux RND transporter permease subunit	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AZW70688.1|868019_869513_+	RND transporter	NA	NA	NA	NA	NA
AZW70689.1|869527_870199_+	transcriptional regulator	NA	NA	NA	NA	NA
AZW70690.1|870242_870737_-	azurin	NA	NA	NA	NA	NA
AZW70691.1|870877_871525_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW73364.1|871628_873677_+	hydantoinase/oxoprolinase family protein	NA	NA	NA	NA	NA
AZW70692.1|873673_875686_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZW70693.1|875711_877046_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW73365.1|877154_878147_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70694.1|878213_880298_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AZW70695.1|880322_881294_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70696.1|881422_882424_-	peptidase M14	NA	NA	NA	NA	NA
AZW70697.1|882457_883699_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZW70698.1|883779_884703_+	transcriptional regulator LrhA	NA	NA	NA	NA	NA
AZW70699.1|884780_885605_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZW70700.1|885801_886818_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW70701.1|887014_887998_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70702.1|889596_890985_-	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW70703.1|891015_892005_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70704.1|892115_893348_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZW70705.1|893629_894430_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70706.1|894452_896684_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZW70707.1|897471_897918_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZW70708.1|897939_898686_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZW70709.1|898829_899807_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZW70710.1|900440_901052_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZW70711.1|901045_902263_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZW70712.1|902403_903354_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	934664	1000564	4108444	transposase	Bacillus_virus(15.38%)	60	NA	NA
AZW70738.1|934664_935615_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70739.1|935667_935889_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70740.1|936048_936261_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70741.1|936380_937499_+	mannose-6-phosphate isomerase	NA	NA	NA	NA	NA
AZW70742.1|937595_937811_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70743.1|938004_938256_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70744.1|939314_939698_-	ferredoxin	NA	NA	NA	NA	NA
AZW70745.1|939752_941570_-	ABC transporter ATP-binding protein/permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZW73367.1|941716_942544_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZW70746.1|942589_943570_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZW70747.1|943566_943779_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70748.1|943775_944957_-	PepSY domain-containing protein	NA	NA	NA	NA	NA
AZW70749.1|945120_945855_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZW70750.1|945856_948469_-	penicillin-binding protein	NA	NA	NA	NA	NA
AZW70751.1|948604_950518_-	S9 family peptidase	NA	NA	NA	NA	NA
AZW70752.1|951133_951544_-	PaaI family thioesterase	NA	NA	NA	NA	NA
AZW70753.1|951641_952727_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZW70754.1|952825_953776_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70755.1|953772_954747_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70756.1|954871_955783_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.4e-05
AZW73368.1|956059_956452_-	type II toxin-antitoxin system HicB family antitoxin	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZW70757.1|956581_957532_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70758.1|957561_957744_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZW70759.1|957782_958040_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70760.1|958516_959698_-	MFS transporter	NA	NA	NA	NA	NA
AZW70761.1|959913_960591_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZW70762.1|960587_961361_-	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	NA	NA	NA	NA	NA
AZW70763.1|961438_962020_-	OmpA family protein	NA	NA	NA	NA	NA
AZW70764.1|962390_965072_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZW70765.1|965071_966205_+	phosphoserine aminotransferase	NA	M1Q1P2	Streptococcus_phage	44.0	6.4e-78
AZW70766.1|966197_967283_+	prephenate dehydratase	NA	NA	NA	NA	NA
AZW70767.1|967369_968269_+	prephenate dehydrogenase/arogenate dehydrogenase family protein	NA	NA	NA	NA	NA
AZW70768.1|968265_969594_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZW70769.1|969608_970280_+	cytidylate kinase	NA	NA	NA	NA	NA
AZW70770.1|970452_972183_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZW70771.1|972184_972544_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZW70772.1|972735_973050_+	DUF1049 domain-containing protein	NA	NA	NA	NA	NA
AZW70773.1|973092_974313_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZW70774.1|974309_975251_+	D-glycero-beta-D-manno-heptose-7-phosphate kinase	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZW70775.1|975247_976237_+	ADP-L-glycero-D-mannoheptose-6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZW70776.1|976271_976856_+	DUF655 domain-containing protein	NA	NA	NA	NA	NA
AZW70777.1|976954_977905_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70778.1|977985_978897_+	cysteine synthase CysM	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
AZW70779.1|978957_980103_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AZW70780.1|980122_981037_+	deacetylase	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
AZW70781.1|981108_981858_+	electron transfer flavoprotein subunit beta/FixA family protein	NA	NA	NA	NA	NA
AZW70782.1|981857_982787_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AZW70783.1|983030_984857_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW70784.1|984939_985581_+	peroxiredoxin	NA	NA	NA	NA	NA
AZW70785.1|985770_986805_+	sulfate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70786.1|988641_989706_+	sulfate/thiosulfate import ATP-binding protein CysA	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
AZW73369.1|990503_991412_+	sulfate adenylyltransferase subunit CysD	NA	NA	NA	NA	NA
AZW70787.1|992899_994174_+	radical SAM protein	NA	NA	NA	NA	NA
AZW70788.1|994327_994708_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70789.1|994715_995588_-	multidrug DMT transporter permease	NA	NA	NA	NA	NA
AZW70790.1|995893_996274_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZW70791.1|996484_997210_+	CoA pyrophosphatase	NA	NA	NA	NA	NA
AZW70792.1|997305_998256_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70793.1|998360_999410_+	NADP(H)-dependent aldo-keto reductase	NA	NA	NA	NA	NA
AZW70794.1|999547_1000564_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
>prophage 10
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	1036925	1082452	4108444	tRNA,transposase	uncultured_Mediterranean_phage(37.5%)	42	NA	NA
AZW70817.1|1036925_1038059_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70818.1|1038335_1038884_-	damage-inducible protein DinB	NA	NA	NA	NA	NA
AZW70819.1|1038902_1039388_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZW70820.1|1039565_1040504_+	curved DNA-binding protein	NA	A0A0P0YMJ9	Yellowstone_lake_phycodnavirus	24.1	5.6e-11
AZW70821.1|1040506_1040824_+	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70822.1|1040869_1041814_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70823.1|1043494_1044145_+	molybdopterin adenylyltransferase	NA	NA	NA	NA	NA
AZW70824.1|1044198_1044534_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70825.1|1044530_1045391_+	M23 family peptidase	NA	A0A292GJG6	Xanthomonas_phage	36.1	2.6e-15
AZW70826.1|1045407_1045689_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70827.1|1045762_1046026_-	translation initiation factor IF-1	NA	NA	NA	NA	NA
AZW70828.1|1046269_1047220_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70829.1|1047518_1048256_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZW70830.1|1048691_1049015_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZW70831.1|1049049_1049610_+	flagellar transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZW70832.1|1049730_1050606_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZW70833.1|1050618_1051566_+	motility protein MotB	NA	NA	NA	NA	NA
AZW70834.1|1051667_1051961_+	response regulator	NA	NA	NA	NA	NA
AZW70835.1|1051987_1054045_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZW70836.1|1054059_1054560_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZW70837.1|1054633_1056340_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZW70838.1|1057203_1058256_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZW70839.1|1058308_1058698_+	chemotaxis protein CheY	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZW70840.1|1058706_1059339_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZW70841.1|1059438_1060455_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW73372.1|1061285_1062293_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZW70842.1|1062289_1063933_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZW70843.1|1063929_1064832_-	transporter associated domain protein	NA	NA	NA	NA	NA
AZW70844.1|1064957_1065431_-	endoribonuclease YbeY	NA	NA	NA	NA	NA
AZW70845.1|1065420_1066443_-	PhoH family protein	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZW70846.1|1066439_1067867_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZW70847.1|1068804_1069821_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW70848.1|1070153_1071089_-	protein translocase subunit SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZW70849.1|1071138_1073019_-	protein translocase subunit SecD	NA	NA	NA	NA	NA
AZW70850.1|1073085_1073430_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZW70851.1|1073574_1074711_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZW70852.1|1074707_1075781_-|tRNA	S-adenosylmethionine:tRNA ribosyltransferase-isomerase	tRNA	NA	NA	NA	NA
AZW70853.1|1075938_1077375_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZW73373.1|1077465_1078107_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZW70854.1|1078442_1079459_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW70855.1|1081335_1081515_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73374.1|1081501_1082452_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	1086498	1158519	4108444	tRNA,holin,transposase	Planktothrix_phage(18.18%)	56	NA	NA
AZW70858.1|1086498_1086912_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZW70859.1|1086913_1087273_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70860.1|1087315_1088860_-	4-hydroxy-3-polyprenylbenzoate decarboxylase	NA	NA	NA	NA	NA
AZW70861.1|1088943_1089774_+	transglycosylase	NA	NA	NA	NA	NA
AZW70862.1|1089808_1090963_-	pyridoxal phosphate-dependent aminotransferase	NA	NA	NA	NA	NA
AZW70863.1|1091005_1091878_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70864.1|1091994_1094283_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZW70865.1|1095489_1095954_+	barstar family protein 2	NA	NA	NA	NA	NA
AZW70866.1|1095980_1096931_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73376.1|1097298_1098075_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZW70867.1|1098119_1098977_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZW70868.1|1098998_1100015_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZW70869.1|1100149_1101190_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZW70870.1|1101384_1103466_-	polyphosphate kinase 1	NA	NA	NA	NA	NA
AZW70871.1|1103701_1105195_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZW70872.1|1105425_1106220_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZW70873.1|1106440_1107799_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZW70874.1|1107795_1108638_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZW70875.1|1108656_1110543_-	ATP-dependent metallopeptidase FtsH/Yme1/Tma family protein	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZW70876.1|1110780_1111413_-	ribosomal RNA large subunit methyltransferase E	NA	NA	NA	NA	NA
AZW70877.1|1111431_1112034_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70878.1|1112185_1113136_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70879.1|1113938_1114739_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70880.1|1114782_1115769_-	homoserine kinase	NA	NA	NA	NA	NA
AZW70881.1|1115908_1116922_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZW70882.1|1116918_1117869_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70883.1|1117981_1118440_-	CBS domain-containing protein	NA	NA	NA	NA	NA
AZW70884.1|1118476_1119790_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70885.1|1119807_1120179_+	DUF2069 domain-containing protein	NA	NA	NA	NA	NA
AZW70886.1|1120175_1121639_+	YdiU family protein	NA	A0A075BSJ0	Microcystis_phage	32.5	1.7e-43
AZW70887.1|1121731_1122508_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW70888.1|1122489_1125369_-	diguanylate phosphodiesterase	NA	NA	NA	NA	NA
AZW70889.1|1125551_1126502_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70890.1|1126669_1127494_+	ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	22.7	1.0e-08
AZW70891.1|1127493_1128372_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW70892.1|1129276_1130392_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW70893.1|1130399_1131215_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	23.7	7.5e-12
AZW70894.1|1131211_1133077_+	long-chain fatty acid--CoA ligase	NA	A0A1V0SBX8	Catovirus	23.3	9.3e-50
AZW70895.1|1133155_1133788_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70896.1|1133784_1134087_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70897.1|1134129_1135650_-|tRNA	lysine--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	36.0	1.2e-82
AZW70898.1|1135656_1136412_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW70899.1|1136441_1137546_-	peptide chain release factor 2	NA	NA	NA	NA	NA
AZW73377.1|1137648_1139349_-	single-stranded-DNA-specific exonuclease RecJ	NA	A7KV88	Bacillus_phage	28.3	1.3e-50
AZW70900.1|1139330_1140308_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70901.1|1140317_1141598_+	lipoprotein-releasing system transmembrane subunit LolC	NA	NA	NA	NA	NA
AZW70902.1|1141590_1142286_+	lipoprotein-releasing system ATP-binding protein LolD	NA	G9BWD6	Planktothrix_phage	38.6	7.0e-35
AZW70903.1|1142319_1143147_+	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZW70904.1|1143428_1146659_+	autotransporter SphB3	NA	NA	NA	NA	NA
AZW70905.1|1146927_1147104_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70906.1|1147394_1151321_+	inverse autotransporter beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZW70907.1|1153220_1155017_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70908.1|1155016_1155985_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW70909.1|1156054_1156900_+	PHP domain-containing protein	NA	NA	NA	NA	NA
AZW70910.1|1156967_1157522_+	transcription elongation factor GreB	NA	NA	NA	NA	NA
AZW70911.1|1157568_1158519_-|transposase	IS481 family transposase IS481v2	transposase	NA	NA	NA	NA
>prophage 12
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	1176305	1236188	4108444	tRNA,transposase	Bacillus_phage(25.0%)	46	NA	NA
AZW70922.1|1176305_1177256_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70923.1|1177385_1178369_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70924.1|1178423_1179146_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW70925.1|1180622_1181978_+|tRNA	tryptophan--tRNA ligase	tRNA	NA	NA	NA	NA
AZW70926.1|1182058_1184434_-	protein tex	NA	NA	NA	NA	NA
AZW70927.1|1184598_1186674_+	ATP-dependent DNA helicase	NA	A0A127AW80	Bacillus_phage	30.0	2.4e-75
AZW70928.1|1186735_1187536_-	outer membrane protein assembly factor BamD	NA	NA	NA	NA	NA
AZW70929.1|1187637_1188600_+	RluA family pseudouridine synthase	NA	NA	NA	NA	NA
AZW70930.1|1188587_1189343_+	peptidoglycan editing factor PgeF	NA	NA	NA	NA	NA
AZW70931.1|1189450_1191088_+	class I poly(R)-hydroxyalkanoic acid synthase	NA	NA	NA	NA	NA
AZW70932.1|1191155_1191893_+	beta-ketoacyl-ACP reductase	NA	NA	NA	NA	NA
AZW70933.1|1191995_1192571_+	polyhydroxyalkanoate synthesis repressor PhaR	NA	NA	NA	NA	NA
AZW70934.1|1192743_1193280_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70935.1|1193282_1193627_+	cupredoxin domain-containing protein	NA	NA	NA	NA	NA
AZW70936.1|1193642_1194488_+	FTR1 family iron permease	NA	NA	NA	NA	NA
AZW70937.1|1194526_1195906_+	4Fe-4S binding domain-containing protein	NA	NA	NA	NA	NA
AZW70938.1|1195983_1196865_+	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZW70939.1|1196963_1197914_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70940.1|1197910_1198321_-	VOC family protein	NA	NA	NA	NA	NA
AZW70941.1|1198428_1199283_-	2-pyrone-4,6-dicarboxylate hydrolase	NA	NA	NA	NA	NA
AZW70942.1|1199275_1200238_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70943.1|1200283_1201408_-	mandelate racemase/muconate lactonizing enzyme family protein	NA	Q6A202	Oenococcus_phage	28.3	1.5e-31
AZW73378.1|1201519_1202392_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70944.1|1202516_1203296_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW70945.1|1203449_1204871_+	MFS transporter	NA	NA	NA	NA	NA
AZW70946.1|1205305_1207003_+	sodium:proline symporter	NA	NA	NA	NA	NA
AZW70947.1|1207031_1207154_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73379.1|1207229_1208171_-	LD-carboxypeptidase	NA	NA	NA	NA	NA
AZW70948.1|1208445_1209243_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70949.1|1209250_1210177_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW70950.1|1210298_1211216_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW70951.1|1211255_1212209_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW70952.1|1212233_1212812_+	amino acid synthesis family protein	NA	NA	NA	NA	NA
AZW70953.1|1214485_1215094_+	hypothetical protein	NA	NA	NA	NA	NA
AZW70954.1|1215171_1215525_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70955.1|1215608_1216598_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZW70956.1|1216800_1217751_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70957.1|1217837_1218788_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70958.1|1218784_1219735_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW70959.1|1219721_1220072_-	hypothetical protein	NA	NA	NA	NA	NA
AZW70960.1|1219995_1221024_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZW70961.1|1221103_1222402_-	TRAP transporter large permease	NA	NA	NA	NA	NA
AZW70962.1|1222398_1222980_-	TRAP transporter small permease	NA	NA	NA	NA	NA
AZW70963.1|1223292_1227339_+	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZW70964.1|1227579_1235241_+	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZW70965.1|1235237_1236188_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 13
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	1292698	1330512	4108444	transposase	Salmonella_phage(50.0%)	37	NA	NA
AZW71011.1|1292698_1293649_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71012.1|1294270_1295998_-	sodium-independent anion transporter	NA	NA	NA	NA	NA
AZW71013.1|1296109_1297468_+	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZW71014.1|1297588_1297774_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71015.1|1297760_1298711_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71016.1|1298751_1299822_+	FUSC family protein	NA	NA	NA	NA	NA
AZW73381.1|1299844_1300723_-	MBL fold metallo-hydrolase	NA	NA	NA	NA	NA
AZW71017.1|1300894_1301866_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW71018.1|1302028_1302871_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71019.1|1303032_1303713_+	anti-sigma factor	NA	NA	NA	NA	NA
AZW71020.1|1303706_1304876_+	amine oxidase	NA	NA	NA	NA	NA
AZW71021.1|1304872_1305904_+	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZW71022.1|1305947_1307189_+	MFS transporter	NA	NA	NA	NA	NA
AZW71023.1|1307223_1308756_-	PLP-dependent aminotransferase family protein	NA	NA	NA	NA	NA
AZW71024.1|1308836_1309460_+	FMN-binding negative transcriptional regulator	NA	NA	NA	NA	NA
AZW71025.1|1309490_1310102_+	LysE family translocator	NA	NA	NA	NA	NA
AZW71026.1|1310137_1310608_+	DUF1801 domain-containing protein	NA	NA	NA	NA	NA
AZW71027.1|1311039_1312044_+	peptidase M20	NA	NA	NA	NA	NA
AZW71028.1|1312080_1313595_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71029.1|1313598_1314558_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW71030.1|1314586_1315390_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW71031.1|1315391_1317026_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZW71032.1|1317109_1318171_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZW71033.1|1318369_1318639_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71034.1|1318642_1319167_+	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZW71035.1|1320528_1321599_-	metal-dependent hydrolase	NA	NA	NA	NA	NA
AZW71036.1|1321671_1322310_+	DedA family protein	NA	NA	NA	NA	NA
AZW71037.1|1322604_1322832_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZW71038.1|1322954_1323668_+	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW71039.1|1323912_1324863_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71040.1|1324966_1325248_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73382.1|1325362_1326793_-	2-aminoadipate aminotransferase	NA	NA	NA	NA	NA
AZW71041.1|1326765_1327716_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71042.1|1327970_1328921_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71043.1|1328917_1329367_-	dUTP diphosphatase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZW71044.1|1329386_1329575_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71045.1|1329561_1330512_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	1419153	1483367	4108444	tRNA,transposase,protease	Salmonella_phage(16.67%)	60	NA	NA
AZW71123.1|1419153_1420104_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71124.1|1420270_1420624_+	cytochrome C	NA	NA	NA	NA	NA
AZW71125.1|1420636_1420999_+	cytochrome	NA	NA	NA	NA	NA
AZW71126.1|1421040_1421466_-	DUF1841 domain-containing protein	NA	NA	NA	NA	NA
AZW71127.1|1421668_1422925_+	NADP-dependent isocitrate dehydrogenase	NA	Q77Z09	Phage_21	64.8	1.2e-11
AZW71128.1|1423123_1424104_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71129.1|1424253_1425495_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71130.1|1425593_1426544_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71131.1|1426552_1427248_-	two-component system response regulator KdpE	NA	NA	NA	NA	NA
AZW71132.1|1430068_1430668_-	potassium-transporting ATPase subunit KdpC	NA	NA	NA	NA	NA
AZW71133.1|1430678_1432844_-	K(+)-transporting ATPase subunit B	NA	M1HBF8	Paramecium_bursaria_Chlorella_virus	27.1	1.2e-24
AZW71134.1|1432867_1434652_-	potassium-transporting ATPase A chain	NA	NA	NA	NA	NA
AZW71135.1|1434651_1434741_-	K(+)-transporting ATPase subunit F	NA	NA	NA	NA	NA
AZW71136.1|1435435_1435708_+	DUF4212 domain-containing protein	NA	NA	NA	NA	NA
AZW71137.1|1435707_1437774_+	cation acetate symporter	NA	NA	NA	NA	NA
AZW71138.1|1437770_1438721_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71139.1|1438819_1439770_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71140.1|1439885_1440218_-	QacE family quaternary ammonium compound efflux SMR transporter	NA	NA	NA	NA	NA
AZW71141.1|1440214_1440901_-	DNA mismatch repair protein MutS	NA	NA	NA	NA	NA
AZW71142.1|1440887_1441847_-	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	40.2	3.1e-57
AZW73390.1|1441888_1444249_+	DNA translocase FtsK	NA	S5VNE3	Mycobacterium_phage	48.0	7.6e-81
AZW71143.1|1444248_1444881_+	outer-membrane lipoprotein carrier protein LolA	NA	NA	NA	NA	NA
AZW71144.1|1444943_1446323_+	replication-associated recombination protein A	NA	G3MBE0	Bacillus_virus	38.9	1.6e-75
AZW71145.1|1446369_1447725_+|tRNA	serine--tRNA ligase	tRNA	A0A1B1IVT2	uncultured_Mediterranean_phage	47.5	1.6e-83
AZW71146.1|1448003_1448252_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71147.1|1448439_1448757_-	virulence factor	NA	NA	NA	NA	NA
AZW71148.1|1449029_1449545_-	hypothetical protein	NA	T1SAR8	Salmonella_phage	44.6	5.1e-06
AZW71149.1|1449638_1449800_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71150.1|1449815_1450571_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZW71151.1|1450909_1451116_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71152.1|1451123_1451783_-	antibiotic resistance protein	NA	NA	NA	NA	NA
AZW71153.1|1452077_1454282_-	TonB-dependent siderophore receptor	NA	NA	NA	NA	NA
AZW71154.1|1454392_1455616_-	MFS transporter	NA	S4TR35	Salmonella_phage	29.4	9.8e-24
AZW71155.1|1455738_1456713_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZW71156.1|1456780_1457974_-	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZW71157.1|1457988_1458789_-	siderophore ferric iron reductase	NA	NA	NA	NA	NA
AZW71158.1|1458785_1460642_-	IucA/IucC family siderophore biosynthesis protein	NA	NA	NA	NA	NA
AZW71159.1|1460638_1461244_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZW71160.1|1461262_1462648_-	alcaligin biosynthesis enzyme	NA	NA	NA	NA	NA
AZW71161.1|1463373_1464600_+	transporter	NA	NA	NA	NA	NA
AZW71162.1|1464688_1465471_+	3-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZW71163.1|1465568_1466519_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71164.1|1466545_1467319_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZW71165.1|1467330_1468572_+	MFS transporter	NA	NA	NA	NA	NA
AZW71166.1|1470388_1471216_-	N-acetylmuramoyl-L-alanine amidase	NA	NA	NA	NA	NA
AZW71167.1|1471217_1471928_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW71168.1|1471924_1472524_-	septum formation inhibitor Maf	NA	NA	NA	NA	NA
AZW73391.1|1472632_1473226_+	DUF177 domain-containing protein	NA	NA	NA	NA	NA
AZW71169.1|1473277_1473460_+	50S ribosomal protein L32	NA	NA	NA	NA	NA
AZW71170.1|1473516_1474575_+	phosphate acyltransferase PlsX	NA	NA	NA	NA	NA
AZW71171.1|1474574_1475561_+	3-oxoacyl-ACP synthase III	NA	NA	NA	NA	NA
AZW71172.1|1475642_1476578_+	[acyl-carrier-protein] S-malonyltransferase	NA	NA	NA	NA	NA
AZW71173.1|1476579_1477332_+	3-oxoacyl-ACP reductase FabG	NA	Q06VL0	Trichoplusia_ni_ascovirus	31.3	6.9e-12
AZW73392.1|1477514_1477754_+	acyl carrier protein	NA	B2ZXV3	Ralstonia_phage	46.6	5.4e-11
AZW71174.1|1477943_1479173_+	beta-ketoacyl-[acyl-carrier-protein] synthase II	NA	NA	NA	NA	NA
AZW71175.1|1479174_1479675_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71176.1|1479671_1480271_+	RNA polymerase sigma factor RpoE	NA	A0A0F6TH34	Sinorhizobium_phage	26.1	2.2e-05
AZW71177.1|1480283_1480784_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71178.1|1480780_1481842_+	siderophore-interacting protein	NA	NA	NA	NA	NA
AZW71179.1|1481879_1483367_+|protease	serine protease	protease	W5SAB9	Pithovirus	31.5	1.2e-07
>prophage 15
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	1713099	1747711	4108444	tRNA,transposase	Moraxella_phage(16.67%)	33	NA	NA
AZW71367.1|1713099_1714050_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71368.1|1714148_1715099_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71369.1|1715197_1717798_-	DUF3394 domain-containing protein	NA	NA	NA	NA	NA
AZW71370.1|1717904_1718909_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71371.1|1719017_1720358_-	aspartate aminotransferase family protein	NA	A0A1V0SKB7	Klosneuvirus	22.8	8.8e-18
AZW71372.1|1720398_1721427_-	MurR/RpiR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71373.1|1721622_1722168_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71374.1|1722164_1722725_+	diaminobutyrate acetyltransferase	NA	NA	NA	NA	NA
AZW71375.1|1722823_1723774_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71376.1|1723872_1724823_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71377.1|1724860_1725448_+	DUF1949 domain-containing protein	NA	A0A1X9I5T8	Streptococcus_phage	35.8	4.7e-16
AZW71378.1|1725465_1725849_-	thioredoxin	NA	V9SJ74	Achromobacter_phage	25.8	8.1e-09
AZW71379.1|1727208_1728501_-	NCS2 family permease	NA	A0A0R6PHV4	Moraxella_phage	36.0	1.7e-66
AZW71380.1|1728635_1729676_+|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	tRNA	A0A0R6PI74	Moraxella_phage	51.3	6.1e-91
AZW71381.1|1729773_1730790_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZW71382.1|1731057_1731705_-	glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZW71383.1|1731830_1732589_+	5'-nucleotidase SurE	NA	A0A1B1ITZ2	uncultured_Mediterranean_phage	51.2	1.4e-68
AZW73401.1|1732663_1733353_+	protein-L-isoaspartate(D-aspartate) O-methyltransferase	NA	A0A1B1IU40	uncultured_Mediterranean_phage	46.9	4.2e-32
AZW71384.1|1733370_1734255_+	peptidase	NA	A0A292GJG6	Xanthomonas_phage	49.5	4.6e-15
AZW71385.1|1734251_1735031_+	3'-5' exonuclease	NA	NA	NA	NA	NA
AZW71386.1|1735057_1735735_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73402.1|1736023_1736776_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71387.1|1736894_1738295_+	23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD	NA	A0A2K5B251	Erysipelothrix_phage	26.5	7.3e-31
AZW71388.1|1738318_1738717_-	Cu(I)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZW71389.1|1738892_1739093_+	copper chaperone	NA	NA	NA	NA	NA
AZW71390.1|1739231_1739960_+	glutaredoxin	NA	A0A1D8KSL1	Synechococcus_phage	56.8	9.6e-43
AZW71391.1|1740093_1741509_+	dihydrolipoyl dehydrogenase	NA	NA	NA	NA	NA
AZW71392.1|1741512_1742376_-	23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ	NA	NA	NA	NA	NA
AZW71393.1|1742388_1743138_-	glycerophosphodiester phosphodiesterase	NA	A0A2H4PGQ5	Escherichia_phage	27.8	1.5e-14
AZW71394.1|1743320_1745336_+	peptidylprolyl isomerase	NA	NA	NA	NA	NA
AZW73403.1|1745317_1745866_-	arylesterase	NA	NA	NA	NA	NA
AZW71395.1|1745942_1746662_+	ABC transporter	NA	G9BWD6	Planktothrix_phage	36.6	1.4e-22
AZW71396.1|1746760_1747711_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2217131	2278479	4108444	tRNA,transposase	Yellowstone_lake_phycodnavirus(12.5%)	52	NA	NA
AZW73421.1|2217131_2218082_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71769.1|2218198_2218918_+	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71770.1|2219090_2220077_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71771.1|2220077_2220560_+	TRAP transporter small permease	NA	NA	NA	NA	NA
AZW71772.1|2220563_2221847_+	TRAP transporter large permease	NA	NA	NA	NA	NA
AZW71773.1|2221843_2222782_+	CoA ester lyase	NA	NA	NA	NA	NA
AZW71774.1|2222778_2224488_+	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
AZW71775.1|2224497_2225745_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZW73422.1|2227355_2228645_-	Glu/Leu/Phe/Val dehydrogenase	NA	NA	NA	NA	NA
AZW71776.1|2229782_2230556_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
AZW71777.1|2231217_2231961_-	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71778.1|2232035_2232776_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71779.1|2232971_2233808_-	hypothetical protein	NA	NA	NA	NA	NA
AZW71780.1|2233858_2234629_-	TatD family deoxyribonuclease	NA	NA	NA	NA	NA
AZW71781.1|2234678_2235731_-	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZW71782.1|2235727_2236354_-	thymidylate kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
AZW71783.1|2236350_2237397_-	endolytic transglycosylase MltG	NA	NA	NA	NA	NA
AZW71784.1|2237563_2238580_+	folate-binding protein	NA	NA	NA	NA	NA
AZW73423.1|2238678_2239629_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71785.1|2242369_2243659_-	D-amino acid dehydrogenase	NA	NA	NA	NA	NA
AZW71786.1|2243777_2244248_-	DNA-binding protein	NA	NA	NA	NA	NA
AZW71787.1|2244258_2245467_-	flavohemoprotein	NA	NA	NA	NA	NA
AZW71788.1|2245613_2246078_+	GatB/YqeY domain-containing protein	NA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
AZW71789.1|2246101_2247052_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71790.1|2248036_2248810_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW71791.1|2248806_2249805_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71792.1|2249889_2250666_-	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AZW71793.1|2250821_2252489_-	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.6e-53
AZW71794.1|2252806_2253931_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71795.1|2254057_2254681_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71796.1|2254677_2256579_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZW71797.1|2256627_2257422_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW71798.1|2257434_2258436_-	muramoyltetrapeptide carboxypeptidase	NA	NA	NA	NA	NA
AZW71799.1|2258432_2258939_-|tRNA	tRNA adenosine(34) deaminase TadA	tRNA	S4VYT2	Pandoravirus	38.4	3.4e-07
AZW71800.1|2258931_2259780_-	hydrolase	NA	NA	NA	NA	NA
AZW71801.1|2259877_2260420_-	hypothetical protein	NA	NA	NA	NA	NA
AZW71802.1|2260463_2261414_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71803.1|2261569_2261896_-	cation:proton antiporter	NA	NA	NA	NA	NA
AZW71804.1|2261892_2262177_-	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZW71805.1|2262173_2262653_-	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZW71806.1|2262649_2264278_-	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZW71807.1|2264274_2264619_-	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZW71808.1|2264618_2267552_-	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZW71809.1|2268710_2269661_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71810.1|2269759_2270056_-	hypothetical protein	NA	NA	NA	NA	NA
AZW71811.1|2270162_2271080_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71812.1|2271084_2271798_-	NAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW71813.1|2271811_2272783_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW71814.1|2274502_2274883_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71815.1|2274886_2276074_+	MFS transporter	NA	NA	NA	NA	NA
AZW73424.1|2276512_2277235_+	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZW71816.1|2277528_2278479_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2360249	2426576	4108444	transposase	Ectocarpus_siliculosus_virus(10.0%)	57	NA	NA
AZW71871.1|2360249_2361200_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71872.1|2361219_2362125_-	pirin family protein	NA	NA	NA	NA	NA
AZW71873.1|2362202_2362901_-	pirin family protein	NA	NA	NA	NA	NA
AZW71874.1|2363060_2364005_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71875.1|2364014_2365505_-	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZW71876.1|2365501_2366569_-	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZW71877.1|2366632_2368045_-	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZW71878.1|2368230_2369451_-	oxygen-independent coproporphyrinogen III oxidase-like protein	NA	NA	NA	NA	NA
AZW71879.1|2369472_2370423_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71880.1|2370521_2371172_-	non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family	NA	NA	NA	NA	NA
AZW71881.1|2371289_2373092_+	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZW71882.1|2372969_2374709_-	HAMP domain-containing protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	27.1	1.0e-10
AZW71883.1|2374743_2375649_-	transcriptional regulator	NA	NA	NA	NA	NA
AZW71884.1|2375830_2377207_+	MmgE/PrpD family protein	NA	NA	NA	NA	NA
AZW71885.1|2377373_2378114_-	ribonuclease PH	NA	NA	NA	NA	NA
AZW71886.1|2378250_2379177_+	YicC family protein	NA	NA	NA	NA	NA
AZW71887.1|2379449_2379605_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71888.1|2379617_2379746_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71889.1|2379742_2380027_+	transcriptional regulator	NA	NA	NA	NA	NA
AZW71890.1|2380085_2381576_-	AMP nucleosidase	NA	NA	NA	NA	NA
AZW71891.1|2381820_2382420_+	NlpC/P60 family protein	NA	A0A0A8WF62	Clostridium_phage	41.6	1.4e-20
AZW71892.1|2382424_2383195_-	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW71893.1|2383432_2384146_+	cytochrome C	NA	NA	NA	NA	NA
AZW71894.1|2384142_2385060_+	cytochrome C	NA	NA	NA	NA	NA
AZW71895.1|2385180_2385828_+	guanylate kinase	NA	A0A218KC48	Bacillus_phage	33.9	3.1e-13
AZW71896.1|2385869_2386073_+	DNA-directed RNA polymerase subunit omega	NA	NA	NA	NA	NA
AZW71897.1|2386097_2388377_+	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase	NA	A0A1B1IUF0	uncultured_Mediterranean_phage	32.1	5.9e-06
AZW71898.1|2388389_2389118_-	glutamine ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.3	3.3e-35
AZW71899.1|2389114_2389774_-	glutamine ABC transporter permease GlnP	NA	NA	NA	NA	NA
AZW71900.1|2389842_2390595_-	glutamine ABC transporter substrate-binding protein GlnH	NA	NA	NA	NA	NA
AZW71901.1|2390776_2391727_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71902.1|2392619_2393525_+	4-hydroxy-tetrahydrodipicolinate synthase	NA	NA	NA	NA	NA
AZW71903.1|2393536_2394664_+	lipoprotein	NA	NA	NA	NA	NA
AZW71904.1|2394752_2395367_-	serotype 3 fimbrial subunit	NA	NA	NA	NA	NA
AZW71905.1|2396024_2397212_-	cupin	NA	NA	NA	NA	NA
AZW73433.1|2397208_2399806_-	DNA mismatch repair protein MutS	NA	A0A1V0SDQ0	Indivirus	22.6	1.5e-21
AZW71906.1|2400060_2400276_+	dodecin domain-containing protein	NA	NA	NA	NA	NA
AZW71907.1|2400731_2401286_-	NAD(P)H-dependent oxidoreductase	NA	A0A2P0ZL82	Lactobacillus_phage	32.0	1.7e-15
AZW71908.1|2401553_2402114_+	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZW71909.1|2402225_2403530_+	peptidase	NA	NA	NA	NA	NA
AZW71910.1|2403526_2405038_+	thiol oxidoreductase	NA	NA	NA	NA	NA
AZW71911.1|2405143_2406145_+	aminopeptidase	NA	NA	NA	NA	NA
AZW71912.1|2406125_2407247_+	DUF1513 domain-containing protein	NA	NA	NA	NA	NA
AZW71913.1|2407344_2408295_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71914.1|2408291_2408918_-	threonylcarbamoyl-AMP synthase	NA	NA	NA	NA	NA
AZW73434.1|2408983_2409829_+	hypothetical protein	NA	A0A1I9SA48	Rhodococcus_phage	35.3	7.0e-37
AZW71915.1|2409932_2410532_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71916.1|2410528_2411293_+	DUF1828 domain-containing protein	NA	NA	NA	NA	NA
AZW71917.1|2411362_2412313_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71918.1|2412411_2413020_-	recombination protein RecR	NA	NA	NA	NA	NA
AZW71919.1|2413070_2413397_-	YbaB/EbfC family nucleoid-associated protein	NA	NA	NA	NA	NA
AZW71920.1|2413443_2415669_-	DNA polymerase III subunit gamma/tau	NA	A0A1U9WR94	Streptococcus_virus	38.5	1.2e-43
AZW71921.1|2416336_2419741_-	nuclease	NA	NA	NA	NA	NA
AZW71922.1|2419753_2422414_-	hypothetical protein	NA	NA	NA	NA	NA
AZW71923.1|2422617_2423820_-	MFS transporter	NA	NA	NA	NA	NA
AZW71924.1|2424506_2425619_+	D-alanyl-D-alanine endopeptidase	NA	NA	NA	NA	NA
AZW71925.1|2425625_2426576_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2454621	2512805	4108444	tRNA,transposase	Planktothrix_phage(33.33%)	54	NA	NA
AZW71957.1|2454621_2455572_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71958.1|2455669_2456440_-	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.5	8.3e-29
AZW71959.1|2456436_2457108_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuD	NA	NA	NA	NA	NA
AZW71960.1|2457104_2457746_-	ectoine/hydroxyectoine ABC transporter permease subunit EhuC	NA	NA	NA	NA	NA
AZW71961.1|2457758_2458679_-	ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB	NA	NA	NA	NA	NA
AZW71962.1|2458839_2460000_-	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71963.1|2460041_2460992_-	ornithine cyclodeaminase	NA	NA	NA	NA	NA
AZW71964.1|2461590_2461815_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71965.1|2461979_2463674_-	phosphoenolpyruvate--protein phosphotransferase	NA	NA	NA	NA	NA
AZW71966.1|2463795_2464065_-	HPr family phosphocarrier protein	NA	NA	NA	NA	NA
AZW71967.1|2464180_2464579_-	PTS mannose transporter subunit IIA	NA	NA	NA	NA	NA
AZW71968.1|2464589_2465546_-	glutathione synthetase	NA	NA	NA	NA	NA
AZW71969.1|2465682_2466228_-	translation initiation factor IF-3	NA	A0A2L0UZ54	Agrobacterium_phage	29.9	9.1e-14
AZW71970.1|2466248_2468198_-|tRNA	threonine--tRNA ligase	tRNA	A0A2K9L297	Tupanvirus	36.0	4.1e-125
AZW71971.1|2468585_2469362_+	DNA-binding response regulator	NA	NA	NA	NA	NA
AZW71972.1|2469367_2469760_+	hypothetical protein	NA	NA	NA	NA	NA
AZW71973.1|2470181_2471132_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71974.1|2471128_2472226_-	sensor domain-containing diguanylate cyclase	NA	A0A127AWB9	Bacillus_phage	37.3	3.5e-20
AZW71975.1|2472257_2473208_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71976.1|2474989_2476231_-	MFS transporter	NA	NA	NA	NA	NA
AZW71977.1|2476242_2477016_-	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZW71978.1|2477042_2477993_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW71979.1|2478472_2479129_-	phosphoribosylanthranilate isomerase	NA	NA	NA	NA	NA
AZW71980.1|2479143_2480811_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZW71981.1|2480813_2481443_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71982.1|2481654_2482749_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71983.1|2482893_2483706_-|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZW71984.1|2483709_2485413_-	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
AZW71985.1|2485463_2486594_-	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZW71986.1|2486780_2487857_-	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AZW73436.1|2487938_2488589_-	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZW71987.1|2488603_2490037_-	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AZW71988.1|2490290_2491109_-	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW71989.1|2491105_2491810_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
AZW71990.1|2492709_2493825_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW71991.1|2493858_2494233_-	hypothetical protein	NA	NA	NA	NA	NA
AZW71992.1|2494255_2495413_-	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
AZW71993.1|2495425_2495659_-	lipoprotein	NA	NA	NA	NA	NA
AZW71994.1|2496293_2499263_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZW71995.1|2499277_2499487_-	formate dehydrogenase	NA	NA	NA	NA	NA
AZW71996.1|2499638_2500268_-	hypothetical protein	NA	NA	NA	NA	NA
AZW71997.1|2500264_2502382_-	4Fe-4S dicluster domain-containing protein	NA	NA	NA	NA	NA
AZW71998.1|2502378_2503059_-	DUF3306 domain-containing protein	NA	NA	NA	NA	NA
AZW71999.1|2503055_2503616_-	DUF3305 domain-containing protein	NA	NA	NA	NA	NA
AZW72000.1|2503622_2504720_-	iron-sulfur cluster carrier protein ApbC	NA	NA	NA	NA	NA
AZW72001.1|2504857_2505466_+	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
AZW72002.1|2505462_2506755_+	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZW72003.1|2506768_2507311_+	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
AZW72004.1|2507320_2508157_-	M48 family peptidase	NA	NA	NA	NA	NA
AZW72005.1|2508190_2509252_-	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
AZW72006.1|2509293_2510346_-	GGDEF domain-containing protein	NA	NA	NA	NA	NA
AZW72007.1|2510361_2510664_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72008.1|2510805_2511756_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72009.1|2511854_2512805_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2578610	2645110	4108444	transposase	uncultured_Caudovirales_phage(40.0%)	56	NA	NA
AZW72067.1|2578610_2579561_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72068.1|2579930_2580503_+	flagellar basal body-associated protein FliL	NA	NA	NA	NA	NA
AZW72069.1|2580505_2581516_+	flagellar motor switch protein FliM	NA	NA	NA	NA	NA
AZW72070.1|2581508_2582009_+	flagellar motor switch protein FliN	NA	NA	NA	NA	NA
AZW72071.1|2582019_2582361_+	flagellar biosynthetic protein FliO	NA	NA	NA	NA	NA
AZW72072.1|2582372_2583164_+	flagellar biosynthetic protein FliP	NA	NA	NA	NA	NA
AZW72073.1|2583180_2583450_+	flagellar biosynthetic protein FliQ	NA	NA	NA	NA	NA
AZW72074.1|2583472_2584261_+	flagellar biosynthetic protein FliR	NA	NA	NA	NA	NA
AZW72075.1|2584307_2585324_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZW72076.1|2585540_2586983_-	PAS domain S-box protein	NA	A0A1B0V854	Salmonella_phage	41.8	1.0e-35
AZW72077.1|2587161_2588781_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	45.3	1.5e-08
AZW72078.1|2588901_2590722_-	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	52.6	6.4e-11
AZW72079.1|2590800_2592333_-	flagellar hook-associated protein 3	NA	NA	NA	NA	NA
AZW72080.1|2592366_2594013_-	flagellar hook-associated protein FlgK	NA	NA	NA	NA	NA
AZW72081.1|2594082_2595105_-	flagellar assembly peptidoglycan hydrolase FlgJ	NA	A0A088F6W1	Sulfitobacter_phage	31.4	1.9e-12
AZW72082.1|2595122_2596256_-	flagellar biosynthesis protein FlgI	NA	NA	NA	NA	NA
AZW72083.1|2596258_2596948_-	flagellar L-ring protein	NA	NA	NA	NA	NA
AZW72084.1|2596947_2597733_-	flagellar basal-body rod protein FlgG	NA	NA	NA	NA	NA
AZW72085.1|2597776_2598541_-	flagellar basal body rod protein FlgF	NA	NA	NA	NA	NA
AZW72086.1|2598579_2600001_-	flagellar hook protein FlgE	NA	NA	NA	NA	NA
AZW72087.1|2600066_2600771_-	flagellar basal body rod modification protein	NA	NA	NA	NA	NA
AZW72088.1|2600818_2601238_-	flagellar basal body rod protein FlgC	NA	NA	NA	NA	NA
AZW72089.1|2601250_2601658_-	flagellar basal body rod protein FlgB	NA	NA	NA	NA	NA
AZW73440.1|2601841_2602552_+	flagellar basal body P-ring formation protein FlgA	NA	NA	NA	NA	NA
AZW72090.1|2602678_2602969_+	flagellar biosynthesis anti-sigma factor FlgM	NA	NA	NA	NA	NA
AZW72091.1|2602986_2603469_+	flagellar protein FlgN	NA	NA	NA	NA	NA
AZW72092.1|2607974_2609129_-	flagellar type III secretion system protein FlhB	NA	NA	NA	NA	NA
AZW72093.1|2609434_2610451_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW72094.1|2610697_2611486_+	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72095.1|2611552_2612233_+	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW72096.1|2612229_2613000_+	amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.1	9.8e-30
AZW72097.1|2613098_2614049_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72098.1|2614104_2615022_-	2-dehydropantoate 2-reductase	NA	NA	NA	NA	NA
AZW72099.1|2615032_2616211_-	mandelate racemase	NA	NA	NA	NA	NA
AZW72100.1|2616230_2617226_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72101.1|2618814_2619423_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZW72102.1|2619410_2620451_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZW72103.1|2620468_2621431_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72104.1|2621427_2622621_-	CoA transferase	NA	NA	NA	NA	NA
AZW72105.1|2622617_2623415_-	citryl-CoA lyase	NA	NA	NA	NA	NA
AZW72106.1|2623440_2624427_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72107.1|2624445_2626485_-	acetyl-CoA synthetase	NA	NA	NA	NA	NA
AZW73441.1|2626686_2627367_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72108.1|2627380_2628292_-	CoA ester lyase	NA	NA	NA	NA	NA
AZW72109.1|2628288_2628867_-	NADPH-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW72110.1|2629005_2629911_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72111.1|2629918_2633338_+	nuclease	NA	NA	NA	NA	NA
AZW72112.1|2633325_2635926_-	BP1344/BB2830 family autotransporter	NA	NA	NA	NA	NA
AZW72113.1|2636881_2637514_-	PadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72114.1|2637907_2638666_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72115.1|2638662_2639865_+	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZW72116.1|2640052_2641003_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72117.1|2641910_2643056_+	DUF3182 domain-containing protein	NA	NA	NA	NA	NA
AZW73442.1|2643075_2643798_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW72118.1|2643914_2644094_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72119.1|2644159_2645110_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2673225	2710636	4108444	transposase	Planktothrix_phage(33.33%)	39	NA	NA
AZW72134.1|2673225_2674176_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72135.1|2674274_2675225_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72136.1|2675317_2675857_+	peroxiredoxin	NA	NA	NA	NA	NA
AZW72137.1|2675963_2676308_-	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZW72138.1|2676365_2677814_-	CoA transferase	NA	NA	NA	NA	NA
AZW72139.1|2678001_2678337_-	tetratricopeptide repeat protein	NA	NA	NA	NA	NA
AZW72140.1|2679964_2681143_+	DUF1501 domain-containing protein	NA	NA	NA	NA	NA
AZW72141.1|2681225_2681726_+	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZW72142.1|2681751_2682537_+	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZW72143.1|2682548_2683013_+	N-acetyltransferase	NA	NA	NA	NA	NA
AZW72144.1|2683009_2683303_+	biotin--protein ligase	NA	NA	NA	NA	NA
AZW72145.1|2683299_2684076_+	lipoate--protein ligase family protein	NA	NA	NA	NA	NA
AZW72146.1|2684104_2684932_+	DUF3298 domain-containing protein	NA	NA	NA	NA	NA
AZW72147.1|2685057_2685528_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72148.1|2685654_2686548_+	phosphatidylserine decarboxylase proenzyme	NA	NA	NA	NA	NA
AZW72149.1|2686595_2687777_+	alpha-hydroxy-acid oxidizing protein	NA	NA	NA	NA	NA
AZW72150.1|2687789_2688605_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72151.1|2688738_2689266_-	RES domain-containing protein	NA	NA	NA	NA	NA
AZW73445.1|2689262_2689760_-	DUF2384 domain-containing protein	NA	NA	NA	NA	NA
AZW72152.1|2689907_2690285_+	DUF423 domain-containing protein	NA	NA	NA	NA	NA
AZW72153.1|2690506_2691457_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73446.1|2691555_2692167_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW72154.1|2692401_2693529_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72155.1|2693639_2694728_-	sn-glycerol-3-phosphate import ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZW72156.1|2694780_2695632_-	sn-glycerol-3-phosphate ABC transporter permease UgpE	NA	NA	NA	NA	NA
AZW72157.1|2695651_2696533_-	sn-glycerol-3-phosphate ABC transporter permease UgpA	NA	NA	NA	NA	NA
AZW73447.1|2696709_2698023_-	sn-glycerol-3-phosphate ABC transporter substrate-binding protein UgpB	NA	NA	NA	NA	NA
AZW72158.1|2698233_2699067_+	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZW72159.1|2699063_2699645_+	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZW72160.1|2699998_2700949_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72161.1|2700964_2702080_+	branched-chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72162.1|2702182_2703109_+	high-affinity branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZW72163.1|2703108_2704347_+	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZW72164.1|2704343_2705111_+	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZW72165.1|2705111_2705813_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZW73448.1|2705894_2706341_-	glutamate racemase	NA	NA	NA	NA	NA
AZW72166.1|2707230_2707869_+	glutathione S-transferase	NA	NA	NA	NA	NA
AZW72167.1|2708636_2709587_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72168.1|2709685_2710636_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2809762	2873254	4108444	transposase	Diachasmimorpha_longicaudata_entomopoxvirus(20.0%)	56	NA	NA
AZW72250.1|2809762_2810713_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72251.1|2810699_2810894_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72252.1|2811041_2811647_+	fimbrial protein FimX	NA	NA	NA	NA	NA
AZW72253.1|2811700_2813014_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZW72254.1|2813088_2813559_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZW72255.1|2813558_2814347_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZW72256.1|2814357_2816010_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZW72257.1|2816097_2817048_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73455.1|2818209_2818716_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZW72258.1|2818712_2819477_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZW72259.1|2819492_2819777_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZW72260.1|2819841_2820831_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZW72261.1|2821002_2821932_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZW72262.1|2821903_2822590_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZW72263.1|2822623_2823169_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZW72264.1|2823213_2824479_+	peptidase M48	NA	NA	NA	NA	NA
AZW72265.1|2824475_2825378_+	ribosome biogenesis GTPase	NA	NA	NA	NA	NA
AZW72266.1|2826559_2827504_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW72267.1|2827598_2829116_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72268.1|2829157_2830786_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZW72269.1|2830893_2831775_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72270.1|2834887_2835262_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZW72271.1|2835286_2835625_-	P-II family nitrogen regulator	NA	NA	NA	NA	NA
AZW72272.1|2835668_2837303_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZW72273.1|2837341_2838688_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZW73456.1|2838795_2840217_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZW72274.1|2840286_2840871_-	nitroreductase	NA	NA	NA	NA	NA
AZW72275.1|2840973_2841924_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72276.1|2842058_2843165_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72277.1|2843175_2844273_+	GTP 3',8-cyclase MoaA	NA	NA	NA	NA	NA
AZW72278.1|2844417_2845623_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZW72279.1|2845629_2846151_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZW72280.1|2846147_2846639_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZW72281.1|2846635_2846887_-	MoaD/ThiS family protein	NA	NA	NA	NA	NA
AZW72282.1|2846867_2847353_-	cyclic pyranopterin monophosphate synthase MoaC	NA	NA	NA	NA	NA
AZW72283.1|2847488_2850950_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72284.1|2850946_2851852_+	dienelactone hydrolase family protein	NA	NA	NA	NA	NA
AZW72285.1|2851861_2852293_-	lipoprotein	NA	NA	NA	NA	NA
AZW73457.1|2852539_2853043_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZW72286.1|2853054_2854521_+	MFS transporter	NA	NA	NA	NA	NA
AZW72287.1|2854595_2855471_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73458.1|2855467_2856475_-	biotin synthase	NA	NA	NA	NA	NA
AZW72288.1|2856942_2857248_+	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZW72289.1|2857338_2857929_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72290.1|2858119_2859136_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW72291.1|2859327_2861664_-	copper-translocating P-type ATPase	NA	E4ZFI9	Streptococcus_phage	42.8	3.2e-124
AZW72292.1|2861746_2862181_+	Cd(II)/Pb(II)-responsive transcriptional regulator	NA	NA	NA	NA	NA
AZW72293.1|2863327_2864278_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72294.1|2864274_2865069_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZW72295.1|2865100_2865805_-	oxidoreductase	NA	NA	NA	NA	NA
AZW72296.1|2865879_2866680_-	SURF1 family protein	NA	NA	NA	NA	NA
AZW72297.1|2866676_2867084_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZW72298.1|2867080_2867722_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZW72299.1|2867714_2869736_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZW72300.1|2870975_2872307_+	MFS transporter	NA	NA	NA	NA	NA
AZW72301.1|2872303_2873254_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2896675	2960422	4108444	transposase,protease	uncultured_Mediterranean_phage(25.0%)	54	NA	NA
AZW72315.1|2896675_2899027_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.2e-164
AZW73459.1|2899046_2901215_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZW72316.1|2901211_2906401_-	alpha-2-macroglobulin family protein	NA	NA	NA	NA	NA
AZW72317.1|2906490_2906805_-|protease	ATP-dependent Clp protease adaptor ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZW72318.1|2907032_2907278_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZW72319.1|2907372_2907891_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	5.1e-14
AZW72320.1|2907990_2909196_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZW72321.1|2909311_2910709_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZW72322.1|2910825_2911404_-	superoxide dismutase [Fe]	NA	NA	NA	NA	NA
AZW72323.1|2911476_2912868_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZW72324.1|2913035_2913986_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72325.1|2914266_2914887_+	MotA/TolQ/ExbB proton channel family protein	NA	NA	NA	NA	NA
AZW72326.1|2914883_2915297_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZW72327.1|2915293_2916337_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZW72328.1|2916392_2916581_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72329.1|2916590_2917355_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZW72330.1|2917445_2918102_+	adenylate kinase	NA	NA	NA	NA	NA
AZW72331.1|2918193_2918952_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW72332.1|2918977_2920579_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZW72333.1|2920779_2921784_+	DUF4880 domain-containing protein	NA	NA	NA	NA	NA
AZW72334.1|2921884_2922148_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZW72335.1|2922265_2923042_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZW72336.1|2923632_2924583_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72337.1|2926966_2928079_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZW72338.1|2928135_2929086_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72339.1|2929294_2929516_-	YgdI/YgdR family lipoprotein	NA	NA	NA	NA	NA
AZW72340.1|2929729_2931136_-	threonine synthase	NA	NA	NA	NA	NA
AZW72341.1|2931132_2932437_-	homoserine dehydrogenase	NA	NA	NA	NA	NA
AZW72342.1|2932433_2933741_-	alanine transaminase	NA	NA	NA	NA	NA
AZW72343.1|2933837_2934290_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72344.1|2934292_2934757_+	peroxiredoxin	NA	NA	NA	NA	NA
AZW72345.1|2936619_2937597_+	4-hydroxythreonine-4-phosphate dehydrogenase PdxA	NA	NA	NA	NA	NA
AZW72346.1|2937676_2938645_+	bile acid:sodium symporter	NA	NA	NA	NA	NA
AZW72347.1|2938665_2940039_-	replicative DNA helicase	NA	C7BGG1	Burkholderia_phage	58.2	4.0e-135
AZW72348.1|2940035_2940872_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72349.1|2940988_2941444_-	50S ribosomal protein L9	NA	NA	NA	NA	NA
AZW72350.1|2941459_2941732_-	30S ribosomal protein S18	NA	NA	NA	NA	NA
AZW72351.1|2941824_2942148_-	primosomal replication protein N	NA	NA	NA	NA	NA
AZW72352.1|2942195_2942576_-	30S ribosomal protein S6	NA	NA	NA	NA	NA
AZW72353.1|2942795_2943593_-	GTP cyclohydrolase I FolE2	NA	NA	NA	NA	NA
AZW72354.1|2943749_2945612_-	1-deoxy-D-xylulose-5-phosphate synthase	NA	NA	NA	NA	NA
AZW72355.1|2945661_2946573_-	polyprenyl synthetase family protein	NA	NA	NA	NA	NA
AZW72356.1|2946577_2946844_-	exodeoxyribonuclease 7 small subunit	NA	NA	NA	NA	NA
AZW73460.1|2946930_2947761_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72357.1|2947935_2948901_+	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72358.1|2949071_2950082_+	hypothetical protein	NA	A0A0F6TJ51	Escherichia_coli_O157_typing_phage	24.6	3.6e-16
AZW72359.1|2950088_2951381_+	aromatic ring-hydroxylating dioxygenase subunit alpha	NA	NA	NA	NA	NA
AZW72360.1|2952523_2953996_-	magnesium transporter	NA	NA	NA	NA	NA
AZW72361.1|2954006_2954417_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZW72362.1|2954480_2955527_-	YeiH family putative sulfate export transporter	NA	NA	NA	NA	NA
AZW72363.1|2955633_2956512_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72364.1|2956525_2957722_-	amidohydrolase	NA	NA	NA	NA	NA
AZW72365.1|2957783_2959475_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	28.1	9.4e-33
AZW72366.1|2959471_2960422_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	2969181	3013702	4108444	transposase	Bacillus_virus(20.0%)	44	NA	NA
AZW72373.1|2969181_2970132_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72374.1|2970212_2971361_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZW72375.1|2971417_2972368_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72376.1|2972354_2972573_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72377.1|2972466_2972772_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZW72378.1|2972800_2973235_-	DUF126 domain-containing protein	NA	NA	NA	NA	NA
AZW72379.1|2973236_2974481_-	DUF521 domain-containing protein	NA	NA	NA	NA	NA
AZW72380.1|2974477_2975188_-	FadR family transcriptional regulator	NA	NA	NA	NA	NA
AZW73461.1|2975202_2976114_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72381.1|2976476_2976881_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72382.1|2976877_2977336_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72383.1|2977342_2978251_+	hypothetical protein	NA	NA	NA	NA	NA
AZW73462.1|2978247_2979114_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZW72384.1|2979100_2979928_+	carbohydrate ABC transporter permease	NA	NA	NA	NA	NA
AZW72385.1|2979938_2981066_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZW72386.1|2982143_2983382_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72387.1|2983423_2984686_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72388.1|2984692_2985445_+	DNA-binding protein	NA	NA	NA	NA	NA
AZW72389.1|2985496_2985682_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72390.1|2985957_2986422_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZW72391.1|2986453_2987113_+	DNA-3-methyladenine glycosylase I	NA	NA	NA	NA	NA
AZW72392.1|2987257_2989366_+	AsmA family protein	NA	NA	NA	NA	NA
AZW72393.1|2989362_2990313_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72394.1|2990416_2991037_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW73463.1|2991140_2991881_+	oxidoreductase	NA	NA	NA	NA	NA
AZW72395.1|2993015_2994140_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72396.1|2994185_2994554_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72397.1|2994795_2995746_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72398.1|2996781_2997324_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72399.1|2997528_2997723_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72400.1|2997709_2998660_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72401.1|2998656_2999622_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72402.1|2999691_3000528_+	3-methyl-2-oxobutanoate hydroxymethyltransferase	NA	A0A0P0BXC9	Ostreococcus_lucimarinus_virus	33.3	1.6e-33
AZW72403.1|3001004_3002150_+	porin	NA	NA	NA	NA	NA
AZW72404.1|3002211_3003162_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72405.1|3003354_3004137_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZW73464.1|3004150_3004900_-	NAD(P)-dependent oxidoreductase	NA	A0A0M4JSW6	Mollivirus	26.4	1.2e-11
AZW73465.1|3004927_3006274_-	MFS transporter	NA	NA	NA	NA	NA
AZW72406.1|3006299_3007229_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW72407.1|3007344_3008250_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72408.1|3008267_3009467_-	aspartate/tyrosine/aromatic aminotransferase	NA	NA	NA	NA	NA
AZW72409.1|3009539_3010232_-	HD domain-containing protein	NA	A0A1D6Y7U0	Golden_Marseillevirus	29.9	4.7e-07
AZW73466.1|3010280_3012770_-	copper-translocating P-type ATPase	NA	A0A218MNH6	uncultured_virus	33.8	1.3e-86
AZW72410.1|3012751_3013702_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	3236674	3271512	4108444	transposase,holin	Erwinia_phage(20.0%)	36	NA	NA
AZW72587.1|3236674_3237625_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72588.1|3238069_3238381_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZW72589.1|3238380_3238911_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72590.1|3239073_3240024_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72591.1|3240313_3240778_+	tripartite tricarboxylate transporter TctB family protein	NA	NA	NA	NA	NA
AZW72592.1|3240792_3242298_+	tripartite tricarboxylate transporter permease	NA	NA	NA	NA	NA
AZW72593.1|3242551_3244159_+	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZW72594.1|3244214_3245120_+	NAD(P)-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW72595.1|3245560_3246511_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72596.1|3246609_3247560_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72597.1|3247641_3248223_-	ATP:cob(I)alamin adenosyltransferase	NA	NA	NA	NA	NA
AZW73481.1|3248647_3248953_+	RND transporter	NA	NA	NA	NA	NA
AZW72598.1|3248966_3250301_-	HslU--HslV peptidase ATPase subunit	NA	A0A191ZC11	Erwinia_phage	29.6	3.5e-43
AZW72599.1|3250322_3250862_-	HslU--HslV peptidase proteolytic subunit	NA	NA	NA	NA	NA
AZW72600.1|3251009_3251474_-	RNA polymerase-binding protein DksA	NA	NA	NA	NA	NA
AZW72601.1|3251616_3252732_-	GTP-binding protein	NA	NA	NA	NA	NA
AZW72602.1|3253008_3253512_-	transcriptional repressor	NA	NA	NA	NA	NA
AZW72603.1|3253649_3253850_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72604.1|3253840_3254563_+	metal ABC transporter ATP-binding protein	NA	A0A2R8FG22	Brazilian_cedratvirus	30.0	1.1e-11
AZW72605.1|3254559_3255456_+	metal ABC transporter permease	NA	NA	NA	NA	NA
AZW72606.1|3255452_3256388_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW73482.1|3256393_3257017_+	DUF1007 domain-containing protein	NA	NA	NA	NA	NA
AZW72607.1|3257007_3257976_+	nickel transporter	NA	NA	NA	NA	NA
AZW72608.1|3258024_3260166_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZW72609.1|3260178_3261159_-	tyrosine recombinase XerC	NA	A0A166YH27	Gordonia_phage	30.5	3.3e-14
AZW72610.1|3261173_3261866_-	DUF484 domain-containing protein	NA	NA	NA	NA	NA
AZW72611.1|3261892_3262804_-	diaminopimelate epimerase	NA	NA	NA	NA	NA
AZW72612.1|3262846_3263737_-	acyltransferase	NA	NA	NA	NA	NA
AZW72613.1|3263733_3264588_-	lipid A biosynthesis lauroyl acyltransferase	NA	NA	NA	NA	NA
AZW72614.1|3264736_3266035_+	methionine adenosyltransferase	NA	A0A2H4PQS6	Staphylococcus_phage	60.9	1.6e-125
AZW72615.1|3266145_3266397_+	DUF1289 domain-containing protein	NA	NA	NA	NA	NA
AZW72616.1|3266476_3267517_+	glycosyltransferase family 1 protein	NA	NA	NA	NA	NA
AZW72617.1|3267796_3269215_+	adenosylhomocysteinase	NA	S4VPF6	Pandoravirus	29.4	8.7e-40
AZW72618.1|3269285_3269621_+|holin	phage holin family protein	holin	NA	NA	NA	NA
AZW72619.1|3269620_3270463_+	methylenetetrahydrofolate reductase [NAD(P)H]	NA	NA	NA	NA	NA
AZW72620.1|3270561_3271512_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	3283340	3334217	4108444	integrase,tRNA,transposase,protease	Planktothrix_phage(33.33%)	38	3317014:3317032	3336901:3336919
AZW72629.1|3283340_3284291_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73484.1|3284603_3286082_+	phospholipase D family protein	NA	NA	NA	NA	NA
AZW72630.1|3286088_3287198_-	molybdenum import ATP-binding protein ModC	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZW72631.1|3287209_3287890_-	molybdate ABC transporter permease subunit	NA	NA	NA	NA	NA
AZW72632.1|3287911_3288667_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW73485.1|3288802_3289687_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW72633.1|3289774_3290356_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72634.1|3290448_3290571_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72635.1|3290616_3290916_-	DUF4148 domain-containing protein	NA	NA	NA	NA	NA
AZW73486.1|3291067_3291493_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72636.1|3293699_3294203_-	Lrp/AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZW72637.1|3294218_3295169_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72638.1|3295155_3295353_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72639.1|3295696_3296470_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72640.1|3296602_3297613_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72641.1|3297764_3299420_-	gamma-glutamyltransferase family protein	NA	NA	NA	NA	NA
AZW72642.1|3299474_3299816_-	cupin domain-containing protein	NA	NA	NA	NA	NA
AZW72643.1|3299829_3301269_-	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW72644.1|3301401_3302217_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72645.1|3302235_3302424_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72646.1|3304747_3305695_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72647.1|3305921_3306662_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72648.1|3306747_3307698_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72649.1|3309139_3310711_-	winged helix family transcriptional regulator	NA	NA	NA	NA	NA
AZW72650.1|3311043_3312897_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72651.1|3312941_3315506_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZW72652.1|3315924_3316875_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
3317014:3317032	attL	CTGCCTGGCGTGGCCGAGT	NA	NA	NA	NA
AZW72653.1|3319740_3320235_-	DUF4276 domain-containing protein	NA	NA	NA	NA	NA
AZW72654.1|3321187_3321388_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72655.1|3321384_3322596_-	chromosome segregation protein SMC	NA	NA	NA	NA	NA
AZW72656.1|3322611_3325563_-	restriction endonuclease subunit M	NA	G8I4P9	Mycobacterium_phage	25.1	2.9e-21
AZW72657.1|3325564_3328684_-	restriction endonuclease	NA	NA	NA	NA	NA
AZW73487.1|3328680_3328821_-	DEAD/DEAH box helicase	NA	NA	NA	NA	NA
AZW72658.1|3328831_3329878_-	Fic family protein	NA	NA	NA	NA	NA
AZW72659.1|3330219_3331347_-|integrase	site-specific integrase	integrase	A0A1B0VMI6	Pseudomonas_phage	33.6	1.4e-48
AZW72660.1|3331626_3332718_-	redox-regulated ATPase YchF	NA	NA	NA	NA	NA
AZW72661.1|3332790_3333573_-|protease	CPBP family intramembrane metalloprotease	protease	NA	NA	NA	NA
AZW72662.1|3333569_3334217_-|tRNA	peptidyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
3336901:3336919	attR	ACTCGGCCACGCCAGGCAG	NA	NA	NA	NA
>prophage 27
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	3402964	3466795	4108444	tRNA,transposase	Staphylococcus_phage(12.5%)	49	NA	NA
AZW72716.1|3402964_3403915_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72717.1|3404681_3405776_-	CoA transferase	NA	NA	NA	NA	NA
AZW72718.1|3405768_3407103_-	CoA ligase	NA	NA	NA	NA	NA
AZW72719.1|3407056_3407740_-	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72720.1|3407765_3408929_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW72721.1|3408925_3409927_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW72722.1|3409926_3410799_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZW72723.1|3410795_3411545_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZW72724.1|3411541_3412333_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZW72725.1|3412329_3413469_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72726.1|3413777_3414530_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW72727.1|3414563_3415346_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW72728.1|3415349_3415739_+	DNA-binding protein	NA	NA	NA	NA	NA
AZW72729.1|3416878_3417742_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW72730.1|3417777_3418866_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72731.1|3419798_3420167_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72732.1|3420165_3423144_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72733.1|3424070_3424949_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZW72734.1|3426897_3427848_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72735.1|3427844_3428312_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZW72736.1|3428354_3429125_-	class I SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZW72737.1|3429145_3429946_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZW72738.1|3429956_3431366_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZW72739.1|3431460_3432246_+	enoyl-[acyl-carrier-protein] reductase FabI	NA	NA	NA	NA	NA
AZW72740.1|3432485_3433502_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZW72741.1|3433609_3434002_-	OsmC family peroxiredoxin	NA	NA	NA	NA	NA
AZW72742.1|3434139_3434820_+	DUF533 domain-containing protein	NA	NA	NA	NA	NA
AZW72743.1|3434824_3435823_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72744.1|3435891_3436842_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72745.1|3438346_3439048_+	DNA-binding response regulator	NA	W8CYM9	Bacillus_phage	36.6	5.6e-32
AZW72746.1|3439047_3440472_+	ATP-binding protein	NA	NA	NA	NA	NA
AZW72747.1|3440488_3441544_-	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZW72748.1|3441540_3442881_-	cytochrome ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZW72749.1|3442996_3444760_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZW72750.1|3444871_3445750_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZW72751.1|3445862_3446678_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZW72752.1|3446681_3446933_+	cell division topological specificity factor	NA	NA	NA	NA	NA
AZW72753.1|3447017_3448034_-|transposase	IS110 family transposase IS1663	transposase	NA	NA	NA	NA
AZW72754.1|3448364_3448586_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72755.1|3450946_3451864_-	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZW72756.1|3452361_3453570_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW72757.1|3453649_3455221_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72758.1|3455338_3456274_-	glycosyltransferase family 2 protein	NA	NA	NA	NA	NA
AZW72759.1|3456462_3457407_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZW72760.1|3457475_3457691_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72761.1|3457974_3463692_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZW72762.1|3463697_3464825_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZW72763.1|3464880_3465507_+	aminotransferase	NA	NA	NA	NA	NA
AZW72764.1|3465778_3466795_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP025344	Bordetella pertussis strain J077 chromosome, complete genome	4108444	3471209	3591576	4108444	tRNA,transposase	Acinetobacter_phage(22.22%)	102	NA	NA
AZW72768.1|3471209_3472082_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZW72769.1|3472350_3473571_+	MFS transporter	NA	NA	NA	NA	NA
AZW72770.1|3473567_3474227_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZW72771.1|3474298_3474931_+	pyridoxine/pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZW72772.1|3474960_3475479_+	flavin reductase	NA	NA	NA	NA	NA
AZW72773.1|3475489_3476599_+	NAD(P)/FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZW72774.1|3476645_3477500_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZW72775.1|3477501_3478404_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72776.1|3479626_3480577_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72777.1|3482331_3483321_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72778.1|3483496_3484285_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZW72779.1|3484281_3485313_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZW72780.1|3485331_3485895_-	type 1 glutamine amidotransferase	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZW72781.1|3485950_3487471_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZW72782.1|3487734_3488439_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZW72783.1|3488446_3489184_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZW72784.1|3489289_3489664_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZW72785.1|3489706_3490996_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72786.1|3490992_3492162_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZW72787.1|3492158_3492998_+	thiol:disulfide interchange protein DsbC	NA	NA	NA	NA	NA
AZW72788.1|3493057_3493993_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZW72789.1|3494005_3494956_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72790.1|3495054_3496017_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZW72791.1|3496048_3496408_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZW72792.1|3496532_3497435_+	NAD(P)/FAD-dependent oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZW72793.1|3497436_3499209_-	PDZ domain-containing protein	NA	NA	NA	NA	NA
AZW72794.1|3499243_3500020_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW72795.1|3501343_3502294_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73491.1|3503145_3503466_+	ABC transporter permease	NA	NA	NA	NA	NA
AZW72796.1|3503538_3504420_+	ATP synthase subunit A	NA	NA	NA	NA	NA
AZW72797.1|3504536_3504779_+	F0F1 ATP synthase subunit C	NA	NA	NA	NA	NA
AZW72798.1|3504916_3505387_+	ATP synthase subunit B	NA	NA	NA	NA	NA
AZW72799.1|3505399_3505939_+	ATP synthase subunit delta	NA	NA	NA	NA	NA
AZW72800.1|3505973_3507515_+	ATP synthase subunit alpha	NA	NA	NA	NA	NA
AZW72801.1|3507613_3508519_+	ATP synthase subunit gamma	NA	NA	NA	NA	NA
AZW72802.1|3508561_3509962_+	ATP synthase subunit beta	NA	NA	NA	NA	NA
AZW72803.1|3509971_3510394_+	ATP synthase epsilon chain	NA	NA	NA	NA	NA
AZW73492.1|3510576_3511461_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72804.1|3511536_3512613_+	uroporphyrinogen decarboxylase	NA	NA	NA	NA	NA
AZW72805.1|3512919_3515022_+	primosomal protein N'	NA	NA	NA	NA	NA
AZW72806.1|3515064_3517134_+	ATP-dependent DNA helicase Rep	NA	A7KV33	Bacillus_phage	37.3	2.6e-101
AZW72807.1|3517232_3518183_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72808.1|3518311_3519445_-	peptidase	NA	NA	NA	NA	NA
AZW72809.1|3519488_3520394_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZW72810.1|3520396_3522097_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.7	1.0e-15
AZW72811.1|3522093_3523014_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW72812.1|3523021_3523999_-	ABC transporter permease	NA	NA	NA	NA	NA
AZW72813.1|3524057_3525092_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZW72814.1|3527066_3527303_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72815.1|3527429_3528293_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZW72816.1|3528381_3529203_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW72817.1|3529282_3530020_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZW72818.1|3530016_3531009_-	nitronate monooxygenase	NA	NA	NA	NA	NA
AZW72819.1|3531122_3531785_+	TetR/AcrR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72820.1|3531829_3532978_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZW72821.1|3535301_3536252_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72822.1|3536592_3537543_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72823.1|3537641_3538592_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72824.1|3538888_3539386_+	hypothetical protein	NA	NA	NA	NA	NA
AZW72825.1|3539428_3541204_+	copper resistance system multicopper oxidase	NA	NA	NA	NA	NA
AZW73493.1|3541250_3542078_+	copper resistance protein B	NA	NA	NA	NA	NA
AZW72826.1|3542084_3542819_-	enoyl-CoA hydratase/isomerase family protein	NA	NA	NA	NA	NA
AZW72827.1|3543988_3544783_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZW72828.1|3545072_3545663_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZW72829.1|3545696_3547025_-	amidase	NA	NA	NA	NA	NA
AZW72830.1|3547099_3548245_-	transporter	NA	NA	NA	NA	NA
AZW72831.1|3548356_3549355_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72832.1|3549317_3549752_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZW72833.1|3551268_3552153_+	EamA/RhaT family transporter	NA	NA	NA	NA	NA
AZW72834.1|3552149_3553355_-	cardiolipin synthase ClsB	NA	NA	NA	NA	NA
AZW72835.1|3553351_3554212_-	endonuclease	NA	NA	NA	NA	NA
AZW72836.1|3554324_3556115_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZW72837.1|3556155_3556821_-	DUF502 domain-containing protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	6.7e-11
AZW72838.1|3556821_3557130_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZW73494.1|3557295_3558582_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72839.1|3560015_3560966_-|transposase	IS481-like element IS481 family transposase	transposase	NA	NA	NA	NA
AZW72840.1|3562917_3564132_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZW72841.1|3564237_3565227_+	KpsF/GutQ family sugar-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZW72842.1|3565223_3565832_+	hydrolase	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZW72843.1|3565844_3566474_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZW72844.1|3566470_3567091_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZW72845.1|3567122_3567914_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZW72846.1|3568756_3569221_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZW72847.1|3569239_3570166_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZW72848.1|3570219_3571506_-	cytochrome c	NA	NA	NA	NA	NA
AZW72849.1|3572436_3573309_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZW72850.1|3573305_3574256_+	septal ring lytic transglycosylase RlpA family protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZW72851.1|3574354_3575305_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW73496.1|3575409_3575640_-	hypothetical protein	NA	NA	NA	NA	NA
AZW73495.1|3575766_3576156_-	hypothetical protein	NA	NA	NA	NA	NA
AZW72852.1|3576172_3578554_-	xanthine dehydrogenase family protein molybdopterin-binding subunit	NA	NA	NA	NA	NA
AZW72853.1|3578546_3579923_-	(2Fe-2S)-binding protein	NA	A0A0P0IVM8	Acinetobacter_phage	37.3	2.4e-18
AZW72854.1|3579938_3580934_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZW72855.1|3580952_3581945_-	tripartite tricarboxylate transporter substrate binding protein	NA	NA	NA	NA	NA
AZW72856.1|3582185_3582746_-	3-octaprenyl-4-hydroxybenzoate carboxy-lyase	NA	NA	NA	NA	NA
AZW72857.1|3582750_3583077_-	monothiol glutaredoxin, Grx4 family	NA	NA	NA	NA	NA
AZW72858.1|3583113_3583926_-	protein-(glutamine-N5) methyltransferase, release factor-specific	NA	NA	NA	NA	NA
AZW72859.1|3583936_3585019_-	peptide chain release factor 1	NA	A0A0S4KWG0	Pseudomonas_phage	40.7	3.3e-07
AZW72860.1|3585105_3586380_-|tRNA	glutamyl-tRNA reductase	tRNA	NA	NA	NA	NA
AZW72861.1|3587102_3588053_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72862.1|3588151_3589102_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZW72863.1|3589200_3591576_-|tRNA	Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase GatCAB subunit C	tRNA	NA	NA	NA	NA
