The following contents displays predicted prophage regions
first line of each prophage describes the prophage information and the following lines describe the proteins and homology proteins in uniprot database
bacteria_id bac_def genome_size prophage_start  prophage_end    key_proteins    best_hit_species    CDS_number  attl_region attr_region
>prophage 1
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	0	64055	4108455	protease,transposase,tRNA	Natrialba_phage(12.5%)	57	NA	NA
AZV81086.1|0_1920_+|tRNA	tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG	tRNA	NA	NA	NA	NA
AZV81087.1|1916_2609_+	16S rRNA (guanine(527)-N(7))-methyltransferase RsmG	NA	NA	NA	NA	NA
AZV81088.1|2605_3403_+	chromosome partitioning protein	NA	Q8JL10	Natrialba_phage	34.9	5.6e-20
AZV81089.1|3409_4171_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV81090.1|4214_5132_+	chromosome partitioning protein ParB	NA	I3NLC2	Bifidobacterium_phage	38.1	1.9e-16
AZV81091.1|5124_5910_+	L-asparaginase	NA	NA	NA	NA	NA
AZV81092.1|5943_6126_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81093.1|6721_7912_+	translation elongation factor Tu	NA	A0A1V0SLW6	Klosneuvirus	29.2	3.1e-14
AZV81094.1|8150_8531_+	preprotein translocase subunit SecE	NA	NA	NA	NA	NA
AZV81095.1|8540_9074_+	transcription termination/antitermination protein NusG	NA	G3MAW2	Bacillus_virus	30.5	1.4e-11
AZV81096.1|9137_9569_+	50S ribosomal protein L11	NA	NA	NA	NA	NA
AZV81097.1|9571_10270_+	50S ribosomal protein L1	NA	NA	NA	NA	NA
AZV81098.1|10512_11037_+	50S ribosomal protein L10	NA	NA	NA	NA	NA
AZV81099.1|11118_11502_+	50S ribosomal protein L7/L12	NA	NA	NA	NA	NA
AZV81100.1|11661_15774_+	DNA-directed RNA polymerase subunit beta	NA	A0A0N9R0J7	Chrysochromulina_ericina_virus	28.8	2.4e-21
AZV81101.1|15773_20018_+	DNA-directed RNA polymerase subunit beta'	NA	A0A2I7QNZ7	Vibrio_phage	24.7	3.5e-68
AZV84453.1|20126_20531_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81102.1|20771_21947_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81103.1|24352_25459_-	peptidoglycan-binding protein	NA	NA	NA	NA	NA
AZV84454.1|26575_27286_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81104.1|27282_28185_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81105.1|28314_28614_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81106.1|28674_29109_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81107.1|29141_30359_-	thiolase	NA	NA	NA	NA	NA
AZV81108.1|30364_30862_-	dehydratase	NA	NA	NA	NA	NA
AZV81109.1|31069_32005_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84455.1|32214_33006_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV81110.1|33048_34470_+	2-methylcitrate dehydratase	NA	NA	NA	NA	NA
AZV81111.1|34673_35576_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81112.1|35572_36763_-	MFS transporter	NA	NA	NA	NA	NA
AZV81113.1|37012_37924_+|tRNA	glycine--tRNA ligase subunit alpha	tRNA	NA	NA	NA	NA
AZV81114.1|37925_40064_+|tRNA	glycine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZV81115.1|40060_40600_+	D-glycero-beta-D-manno-heptose-1,7-bisphosphate 7-phosphatase	NA	NA	NA	NA	NA
AZV81116.1|40603_41332_+	1-acyl-sn-glycerol-3-phosphate acyltransferase	NA	NA	NA	NA	NA
AZV81117.1|41318_42212_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81118.1|42282_42678_+	lactoylglutathione lyase	NA	NA	NA	NA	NA
AZV81119.1|42687_43218_+	peptide deformylase	NA	E3SLL2	Synechococcus_phage	35.4	3.7e-12
AZV81120.1|43346_43526_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81121.1|43663_44614_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84456.1|45224_45749_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81122.1|45720_45957_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZV81123.1|46084_46978_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81124.1|48147_49395_+	homoserine O-acetyltransferase	NA	NA	NA	NA	NA
AZV81125.1|49391_50006_+	methionine biosynthesis protein MetW	NA	NA	NA	NA	NA
AZV81126.1|50189_51092_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81127.1|51134_52391_+	muropeptide transporter AmpG	NA	NA	NA	NA	NA
AZV81128.1|53622_54357_-	glutamate racemase	NA	NA	NA	NA	NA
AZV81129.1|54362_54953_-	arginine transporter ATP-binding subunit	NA	G9BWD6	Planktothrix_phage	33.6	3.2e-20
AZV81130.1|54977_55667_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV81131.1|55663_56425_-	glutamate ABC transporter permease	NA	NA	NA	NA	NA
AZV81132.1|56504_57404_-	amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81133.1|57497_58448_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81134.1|59248_60475_-	serine kinase HipA	NA	NA	NA	NA	NA
AZV81135.1|60474_60894_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV84457.1|61077_62019_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81136.1|62442_63417_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81137.1|63473_64055_-|protease	protease	protease	NA	NA	NA	NA
>prophage 2
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	69085	122073	4108455	transposase,tRNA	Planktothrix_phage(20.0%)	53	NA	NA
AZV81143.1|69085_70036_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81144.1|70129_70444_+|transposase	transposase	transposase	NA	NA	NA	NA
AZV81145.1|71636_73544_+	molecular chaperone HtpG	NA	A0A1B1ISV4	uncultured_Mediterranean_phage	37.2	1.1e-117
AZV81146.1|73705_74326_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZV81147.1|74357_74939_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A1W6DX33	Sphingobium_phage	54.3	1.7e-05
AZV81148.1|75027_75279_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81149.1|75280_76123_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81150.1|76228_77638_+	signal recognition particle protein	NA	NA	NA	NA	NA
AZV81151.1|77634_78585_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84458.1|78659_79604_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81152.1|79600_81475_-	polysaccharide biosynthesis protein	NA	A0A2P1ELS8	Moumouvirus	26.9	2.0e-23
AZV81153.1|82822_83527_-	lipopolysaccharide biosynthesis protein	NA	NA	NA	NA	NA
AZV81154.1|83523_84630_-	glycosyl transferase	NA	NA	NA	NA	NA
AZV81155.1|84891_85485_-	sugar transferase	NA	NA	NA	NA	NA
AZV81156.1|85481_86669_-	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase	NA	NA	NA	NA	NA
AZV81157.1|86731_87991_-	glycosyltransferase WbuB	NA	NA	NA	NA	NA
AZV81158.1|88014_89103_-	UDP-N-acetylglucosamine 2-epimerase	NA	A0A0N9R0B2	Chrysochromulina_ericina_virus	36.3	4.8e-46
AZV81159.1|89110_90211_-	aminotransferase DegT	NA	A0A2K9L0G1	Tupanvirus	29.7	3.3e-31
AZV81160.1|90214_90790_-	N-acetyltransferase	NA	NA	NA	NA	NA
AZV81161.1|90793_91846_-	oxidoreductase	NA	NA	NA	NA	NA
AZV84459.1|91976_92984_+	lipopolysaccharide heptosyltransferase I	NA	NA	NA	NA	NA
AZV81162.1|92985_94272_+	3-deoxy-D-manno-octulosonic acid transferase	NA	NA	NA	NA	NA
AZV81163.1|94288_94444_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81164.1|94468_95272_-	pantothenate kinase	NA	NA	NA	NA	NA
AZV81165.1|95268_96135_-	biotin--[acetyl-CoA-carboxylase] ligase	NA	NA	NA	NA	NA
AZV81166.1|96209_97340_+	ABC transporter permease	NA	NA	NA	NA	NA
AZV81167.1|97339_98179_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	32.4	9.1e-21
AZV81168.1|98332_98800_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81169.1|98889_99111_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81170.1|99111_99714_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81171.1|99743_100397_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV84460.1|100607_101786_+	peptidase	NA	B6DZZ7	Stx2-converting_phage	40.5	5.8e-66
AZV81172.1|101866_102733_+	D-amino acid aminotransferase	NA	NA	NA	NA	NA
AZV81173.1|102808_103084_+	DUF493 domain-containing protein	NA	NA	NA	NA	NA
AZV81174.1|103091_103754_+	octanoyltransferase	NA	NA	NA	NA	NA
AZV81175.1|103815_104817_+	lipoyl synthase	NA	NA	NA	NA	NA
AZV81176.1|104831_105380_-	dTDP-4-dehydrorhamnose 3,5-epimerase	NA	A0A291LA62	Escherichia_phage	53.4	3.7e-47
AZV81177.1|105437_106334_-	dTDP-4-dehydrorhamnose reductase	NA	NA	NA	NA	NA
AZV81178.1|106330_107392_-	dTDP-glucose 4,6-dehydratase	NA	A0A1D7XFE8	Escherichia_phage	44.8	1.6e-78
AZV81179.1|107427_108330_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81180.1|109277_110471_+	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZV81181.1|110552_111182_-	thiol:disulfide interchange protein	NA	NA	NA	NA	NA
AZV81182.1|111243_111927_-	cell division protein	NA	NA	NA	NA	NA
AZV81183.1|111936_113619_-|tRNA	arginine--tRNA ligase	tRNA	NA	NA	NA	NA
AZV84461.1|113906_114254_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81184.1|114344_114662_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84462.1|114944_115961_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV81185.1|116036_116837_-	ABC transporter permease	NA	NA	NA	NA	NA
AZV81186.1|116833_117709_-	ABC transporter permease	NA	NA	NA	NA	NA
AZV81187.1|117719_119012_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81188.1|119054_120095_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	33.7	6.0e-22
AZV81189.1|120200_121022_-	phosphodiesterase	NA	NA	NA	NA	NA
AZV81190.1|121122_122073_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 3
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	164890	301498	4108455	protease,transposase,tRNA	Klosneuvirus(10.53%)	117	NA	NA
AZV81226.1|164890_165793_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81227.1|167284_168187_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81228.1|168164_168794_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81229.1|169076_170507_+	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	29.8	5.8e-44
AZV81230.1|170540_171170_+	threonine transporter RhtB	NA	NA	NA	NA	NA
AZV81231.1|171218_172826_+	peptide chain release factor 3	NA	A0A2K9L6L3	Tupanvirus	37.8	9.3e-14
AZV81232.1|172862_173534_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84465.1|173615_174092_-	bacterioferritin	NA	NA	NA	NA	NA
AZV81233.1|174346_175249_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81234.1|176364_176892_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81235.1|176983_177799_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81236.1|177859_178594_+	sulfurtransferase	NA	NA	NA	NA	NA
AZV81237.1|178631_180710_-|tRNA	methionine--tRNA ligase	tRNA	A0A1V0SHR2	Klosneuvirus	23.6	1.5e-27
AZV81238.1|180959_181232_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81239.1|181333_182419_+	ATP-binding protein	NA	NA	NA	NA	NA
AZV81240.1|182422_184327_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81241.1|184323_187998_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81242.1|188058_188622_+	dCTP deaminase	NA	S5VM63	Pseudomonas_phage	75.3	2.6e-72
AZV81243.1|188629_189052_-	glyoxalase	NA	NA	NA	NA	NA
AZV81244.1|189079_189499_-	glyoxalase	NA	NA	NA	NA	NA
AZV81245.1|189527_189875_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV84466.1|190148_190598_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81246.1|190752_193023_+	lysine decarboxylase	NA	NA	NA	NA	NA
AZV81247.1|193098_194304_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81248.1|195454_196090_+	superoxide dismutase	NA	Q56AR7	Bacillus_thuringiensis_phage	73.8	2.8e-83
AZV81249.1|196086_196980_+	ZIP family metal transporter	NA	NA	NA	NA	NA
AZV81250.1|197374_198475_+	glycine cleavage system protein T	NA	NA	NA	NA	NA
AZV81251.1|198556_198931_+	glycine cleavage system protein H	NA	NA	NA	NA	NA
AZV81252.1|198990_201855_+	glycine dehydrogenase (aminomethyl-transferring)	NA	E3SN07	Prochlorococcus_phage	51.4	1.2e-261
AZV81253.1|201999_202740_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81254.1|202809_204021_+	formyl-CoA transferase	NA	NA	NA	NA	NA
AZV81255.1|204049_205018_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81256.1|205679_206582_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81257.1|206738_207062_+	PsiF repeat family protein	NA	NA	NA	NA	NA
AZV84467.1|207166_208207_-	cyclase	NA	NA	NA	NA	NA
AZV81258.1|208212_208992_-	3-oxoadipate enol-lactonase	NA	NA	NA	NA	NA
AZV81259.1|209037_209334_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81260.1|209359_209635_-	muconolactone delta-isomerase	NA	NA	NA	NA	NA
AZV81261.1|209691_210336_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZV81262.1|210335_211022_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZV84468.1|211220_212003_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81263.1|212053_212779_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZV81264.1|212810_214160_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZV81265.1|214271_215204_-	3-hydroxybutyryl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV81266.1|215661_218457_-	peptidase S8	NA	NA	NA	NA	NA
AZV81267.1|219050_221894_-	phosphoenolpyruvate carboxylase	NA	NA	NA	NA	NA
AZV81268.1|222064_222784_+	7-cyano-7-deazaguanine synthase QueC	NA	A0A0A0RPC6	Escherichia_phage	43.9	8.0e-50
AZV81269.1|222822_223371_-	GNAT family N-acetyltransferase	NA	A0A2H4J136	uncultured_Caudovirales_phage	41.7	1.2e-21
AZV81270.1|223525_224425_+	virginiamycin B lyase	NA	NA	NA	NA	NA
AZV81271.1|224449_225400_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81272.1|225618_226314_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81273.1|226330_227743_+	hydroxyacid dehydrogenase	NA	NA	NA	NA	NA
AZV81274.1|227855_229286_+	aldehyde dehydrogenase family protein	NA	NA	NA	NA	NA
AZV81275.1|229327_231241_-	phosphomethylpyrimidine synthase ThiC	NA	NA	NA	NA	NA
AZV81276.1|231559_232126_+	preprotein translocase subunit SecD	NA	NA	NA	NA	NA
AZV81277.1|232216_233218_+	restriction endonuclease	NA	NA	NA	NA	NA
AZV81278.1|233332_234283_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81279.1|234369_235320_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81280.1|235316_236267_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81281.1|236365_237163_-	beta-D-hydroxybutyrate dehydrogenase	NA	NA	NA	NA	NA
AZV81282.1|238112_238523_+	4-carboxymuconolactone decarboxylase	NA	NA	NA	NA	NA
AZV81283.1|238772_239528_+	gamma-hydroxybutyrate dehydrogenase	NA	D2K0C8	Staphylococcus_phage	55.0	4.6e-32
AZV81284.1|239544_240288_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81285.1|240331_241375_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV84469.1|242388_243648_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81286.1|245058_246015_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81287.1|246033_246525_-	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase	NA	NA	NA	NA	NA
AZV81288.1|246521_247877_-	poly(A) polymerase	NA	A0A1B1IVF3	uncultured_Mediterranean_phage	36.8	3.4e-25
AZV81289.1|247877_248576_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81290.1|248572_249274_-	DnaA regulatory inactivator Hda	NA	NA	NA	NA	NA
AZV81291.1|249526_250576_+	phosphoribosylformylglycinamidine cyclo-ligase	NA	Q58MH8	Prochlorococcus_phage	43.6	5.6e-68
AZV81292.1|250681_251623_-|tRNA	tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA	tRNA	NA	NA	NA	NA
AZV81293.1|251619_253509_-	DNA mismatch repair protein MutL	NA	A0A1B2LRQ5	Wolbachia_phage	32.8	3.3e-79
AZV84470.1|253613_254234_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81294.1|254376_255762_-	N-acetylmuramoyl-L-alanine amidase	NA	A0A2H4JCM7	uncultured_Caudovirales_phage	30.3	4.5e-17
AZV81295.1|255692_256229_-|tRNA	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	tRNA	NA	NA	NA	NA
AZV81296.1|256380_257772_+	fumarate hydratase, class II	NA	NA	NA	NA	NA
AZV81297.1|257788_258769_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81298.1|258904_259888_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81299.1|259952_260852_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81300.1|260958_262713_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZV81301.1|262720_263845_-	carnitine dehydratase	NA	NA	NA	NA	NA
AZV81302.1|263858_264839_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81303.1|265569_266520_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81304.1|266534_266906_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81305.1|267079_267625_+	ArsR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81306.1|267750_269328_+	cytochrome d terminal oxidase subunit 1	NA	NA	NA	NA	NA
AZV81307.1|269343_270498_+	cytochrome d ubiquinol oxidase subunit II	NA	NA	NA	NA	NA
AZV81308.1|270511_270637_+	cyd operon protein YbgT	NA	NA	NA	NA	NA
AZV81309.1|270633_272385_+	thiol reductant ABC exporter subunit CydD	NA	W8CYL7	Bacillus_phage	23.8	3.4e-09
AZV81310.1|272381_274061_+	thiol reductant ABC exporter subunit CydC	NA	W8CYL7	Bacillus_phage	27.6	3.6e-16
AZV81311.1|274123_274672_+	adenine phosphoribosyltransferase	NA	A0A1V0SKE5	Klosneuvirus	43.1	1.3e-28
AZV81312.1|275814_276093_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81313.1|277136_278087_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81314.1|278363_278525_+	DUF4224 domain-containing protein	NA	NA	NA	NA	NA
AZV81315.1|278532_278673_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81316.1|279191_279641_-|protease	ClpXP protease specificity-enhancing factor	protease	NA	NA	NA	NA
AZV81317.1|279650_280262_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZV81318.1|280420_281269_-	cytochrome c1	NA	NA	NA	NA	NA
AZV81319.1|281294_282677_-	cytochrome b	NA	NA	NA	NA	NA
AZV81320.1|282741_283383_-	ubiquinol-cytochrome c reductase iron-sulfur subunit	NA	NA	NA	NA	NA
AZV81321.1|283522_283981_+	large-conductance mechanosensitive channel protein	NA	NA	NA	NA	NA
AZV81322.1|284005_284782_-	Nif3-like dinuclear metal center hexameric protein	NA	NA	NA	NA	NA
AZV84471.1|284835_285972_+	2-alkenal reductase	NA	W5SAB9	Pithovirus	31.2	1.2e-07
AZV81323.1|285968_286919_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81324.1|287017_287644_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81325.1|287666_288593_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
AZV81326.1|288601_290188_-	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81327.1|290184_291189_-	acetylesterase	NA	A0A2L2DMU8	Acanthamoeba_polyphaga_mimivirus	31.5	7.5e-30
AZV81328.1|291388_292249_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZV81329.1|292280_293282_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81330.1|293352_294162_+	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZV81331.1|294239_296099_+	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZV81332.1|296227_297430_-	MFS transporter	NA	NA	NA	NA	NA
AZV81333.1|297543_298425_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81334.1|299927_300488_-	5'-3'-deoxyribonucleotidase	NA	A0A1E1EUN3	Acanthamoeba_castellanii_mimivirus	30.8	3.2e-14
AZV81335.1|300547_301498_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 4
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	390852	448361	4108455	transposase	Orpheovirus(14.29%)	50	NA	NA
AZV81422.1|390852_391803_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81423.1|391945_392857_+	reductase	NA	NA	NA	NA	NA
AZV81424.1|392853_393102_+	NrdH-redoxin	NA	NA	NA	NA	NA
AZV81425.1|393098_394304_+	CoA transferase	NA	NA	NA	NA	NA
AZV81426.1|394376_395372_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81427.1|395394_396615_-	acyl-CoA transferase	NA	NA	NA	NA	NA
AZV81428.1|396611_397256_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81429.1|397252_397645_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81430.1|397533_398886_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81431.1|398986_399796_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84477.1|400100_401054_+	thioredoxin-disulfide reductase	NA	A0A2I2L5E1	Orpheovirus	42.5	5.6e-59
AZV81432.1|401152_402136_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81433.1|402812_403583_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV81434.1|403579_404758_-	carnitine dehydratase	NA	NA	NA	NA	NA
AZV81435.1|404925_406632_-	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZV81436.1|406628_407525_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81437.1|407565_409155_-	sulfurtransferase	NA	NA	NA	NA	NA
AZV81438.1|409204_410197_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81439.1|410265_410865_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81440.1|411325_412306_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81441.1|412381_413284_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81442.1|413420_414335_+	EamA family transporter	NA	NA	NA	NA	NA
AZV81443.1|414331_414991_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81444.1|415080_416004_+	alpha/beta hydrolase	NA	A0A1C9C5K3	Heterosigma_akashiwo_virus	27.2	4.8e-07
AZV81445.1|416009_416465_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81446.1|416461_417565_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81447.1|417752_419372_-	dolichyl-phosphate-mannose--protein mannosyltransferase	NA	NA	NA	NA	NA
AZV81448.1|419368_420427_-	glycosyltransferase	NA	I1TED8	Salmonella_phage	40.5	2.8e-59
AZV81449.1|420556_421051_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV81450.1|421143_422121_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81451.1|422316_423522_+	sodium/glutamate symporter	NA	NA	NA	NA	NA
AZV81452.1|423518_425030_+	TRAP ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV84478.1|425045_426359_-	short-chain fatty acid transporter	NA	NA	NA	NA	NA
AZV81453.1|426549_426729_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81454.1|427138_427873_-	DNA polymerase III subunit epsilon	NA	A0A1X9SH08	Bradyrhizobium_phage	43.8	1.4e-41
AZV81455.1|430365_431268_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81456.1|431399_431798_-	elongation factor G	NA	E4ZFJ7	Streptococcus_phage	44.3	9.0e-19
AZV81457.1|432208_432679_-	universal stress protein	NA	NA	NA	NA	NA
AZV81458.1|432767_433112_-	TIGR01244 family protein	NA	NA	NA	NA	NA
AZV81459.1|433211_434612_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81460.1|436400_436919_-	methyltransferase	NA	G3MA03	Bacillus_virus	38.9	2.1e-12
AZV81461.1|437029_437785_+	hypothetical protein	NA	A0A0R6PEZ3	Moraxella_phage	40.8	2.9e-42
AZV81462.1|437980_439213_+	CoA transferase	NA	NA	NA	NA	NA
AZV81463.1|439205_439991_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV81464.1|440057_441029_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81465.1|441039_442017_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81466.1|442142_443315_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV81467.1|443341_444370_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV81468.1|444435_445629_+	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZV81469.1|447410_448361_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 5
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	590415	652654	4108455	transposase	uncultured_Mediterranean_phage(40.0%)	56	NA	NA
AZV81597.1|590415_591366_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81598.1|591841_592732_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
AZV81599.1|592728_593550_+	phosphonate ABC transporter, permease protein PhnE	NA	NA	NA	NA	NA
AZV81600.1|593749_594241_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81601.1|594259_595333_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81602.1|595379_596483_-	signal recognition particle-docking protein FtsY	NA	NA	NA	NA	NA
AZV81603.1|596534_597179_+	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	NA	NA	NA	NA	NA
AZV81604.1|597199_597709_+	pantetheine-phosphate adenylyltransferase	NA	A0A1B1IVQ3	uncultured_Mediterranean_phage	42.1	1.2e-28
AZV81605.1|597763_598015_+	ferredoxin	NA	A0A1B1IWY9	uncultured_Mediterranean_phage	53.4	1.6e-18
AZV81606.1|598078_599212_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81607.1|599219_599606_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81608.1|599602_602122_-	cell envelope biogenesis protein AsmA	NA	NA	NA	NA	NA
AZV81609.1|602550_602889_+	transcriptional regulator	NA	NA	NA	NA	NA
AZV81610.1|602885_603392_+	polyketide cyclase	NA	NA	NA	NA	NA
AZV81611.1|603453_604254_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81612.1|604364_605306_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81613.1|605399_606935_-	MlrC family protein 3	NA	NA	NA	NA	NA
AZV81614.1|608614_610465_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	29.2	1.6e-17
AZV81615.1|610468_611302_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AZV81616.1|611301_612243_-	peptide ABC transporter	NA	NA	NA	NA	NA
AZV81617.1|612494_613490_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81618.1|613607_615896_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZV81619.1|616201_617110_+	taurine dioxygenase	NA	NA	NA	NA	NA
AZV81620.1|617164_618130_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81621.1|618204_619866_+	thiamine pyrophosphate-binding protein	NA	NA	NA	NA	NA
AZV81622.1|619937_620648_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81623.1|620796_621747_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81624.1|622445_622829_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81625.1|622886_623489_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84485.1|623506_623908_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81626.1|624023_624935_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81627.1|624931_625513_+	NUDIX hydrolase	NA	NA	NA	NA	NA
AZV84486.1|626316_627042_+	arginyltransferase	NA	NA	NA	NA	NA
AZV81628.1|627082_628132_+	dihydroorotate dehydrogenase (quinone)	NA	NA	NA	NA	NA
AZV81629.1|628279_628858_-	Phasin (PHA-granule associated protein)	NA	NA	NA	NA	NA
AZV81630.1|629244_630222_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81631.1|630315_634710_-	dermonecrotic toxin	NA	NA	NA	NA	NA
AZV81632.1|634910_635759_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81633.1|635917_636730_-	competence/damage-inducible protein A	NA	NA	NA	NA	NA
AZV81634.1|636785_637736_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81635.1|637834_638635_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81636.1|638696_639080_+	thiol reductase thioredoxin	NA	NA	NA	NA	NA
AZV81637.1|639091_640525_-	ATP-dependent RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	34.4	1.5e-52
AZV81638.1|640731_641061_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81639.1|641063_641813_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81640.1|641995_642916_+	branched chain amino acid aminotransferase	NA	NA	NA	NA	NA
AZV81641.1|642962_643175_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81642.1|643197_643620_+	DUF4440 domain-containing protein	NA	NA	NA	NA	NA
AZV81643.1|643636_644737_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV81644.1|644833_646351_-	peptidase	NA	NA	NA	NA	NA
AZV81645.1|646426_647266_+	UTP--glucose-1-phosphate uridylyltransferase	NA	A0A127AW70	Bacillus_phage	48.9	1.1e-66
AZV84487.1|647287_648160_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81646.1|648250_649345_-	porin	NA	NA	NA	NA	NA
AZV81647.1|649638_650589_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81648.1|650687_651590_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84488.1|651712_652654_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 6
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	657978	704169	4108455	terminase,transposase,tail,tRNA	uncultured_Caudovirales_phage(18.18%)	51	NA	NA
AZV81654.1|657978_659004_+|tRNA	tRNA dihydrouridine synthase DusB	tRNA	NA	NA	NA	NA
AZV81655.1|659044_659284_+	Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZV81656.1|659353_660943_+	bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase	NA	Q58MG4	Prochlorococcus_phage	47.2	8.7e-65
AZV81657.1|660942_661491_+	crossover junction endodeoxyribonuclease RuvC	NA	NA	NA	NA	NA
AZV81658.1|661571_662144_+	Holliday junction DNA helicase RuvA	NA	NA	NA	NA	NA
AZV81659.1|662162_663074_-	NAD-dependent dehydratase	NA	NA	NA	NA	NA
AZV81660.1|663147_664116_-	serine dehydratase	NA	NA	NA	NA	NA
AZV81661.1|664238_665312_+	Holliday junction DNA helicase RuvB	NA	A0A127AWE7	Bacillus_phage	25.7	2.3e-08
AZV81662.1|665316_667137_-	ATP-dependent DNA helicase RecQ	NA	L7RCS0	Acanthamoeba_polyphaga_moumouvirus	35.3	3.1e-74
AZV81663.1|667213_668116_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81664.1|668252_668588_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81665.1|668721_669372_+	carbonate dehydratase	NA	NA	NA	NA	NA
AZV81666.1|669393_670812_-	amidase	NA	NA	NA	NA	NA
AZV81667.1|670881_671637_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84489.1|671605_672364_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV81668.1|672374_673256_+	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV81669.1|673272_673980_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	25.4	8.2e-07
AZV81670.1|673982_674741_+	ABC transporter ATP-binding protein	NA	W6JKT0	Anomala_cuprea_entomopoxvirus	24.4	4.4e-14
AZV81671.1|674950_676693_+	sulfite reductase	NA	NA	NA	NA	NA
AZV81672.1|676685_677210_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81673.1|677249_678044_-	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81674.1|678211_679285_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81675.1|679383_680334_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81676.1|680585_680792_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84490.1|680863_681475_-	LexA family transcriptional repressor	NA	NA	NA	NA	NA
AZV81677.1|681954_682275_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81678.1|682267_682966_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81679.1|682980_683202_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81680.1|683219_684170_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81681.1|684809_685295_+|terminase	terminase	terminase	C7U0W1	Enterobacteria_phage	61.5	7.3e-39
AZV81682.1|685281_686559_+|terminase	terminase	terminase	A0A1B1P9C9	Acinetobacter_phage	64.7	2.4e-150
AZV81683.1|686561_687980_+	hypothetical protein	NA	R9TF43	Synechococcus_phage	42.1	2.2e-99
AZV81684.1|687951_689064_+	hypothetical protein	NA	A0A0H5BBX3	Pseudomonas_phage	49.7	2.1e-102
AZV81685.1|689069_689312_+	hypothetical protein	NA	A0A0H5AUE5	Pseudomonas_phage	53.2	5.6e-16
AZV81686.1|689434_690037_+	hypothetical protein	NA	R9TF81	Synechococcus_phage	43.6	7.9e-27
AZV81687.1|690465_691416_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81688.1|692090_692342_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81689.1|692404_692887_+	hypothetical protein	NA	A0A2H4JE38	uncultured_Caudovirales_phage	37.1	1.8e-13
AZV81690.1|692888_693089_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81691.1|693088_693484_+	hypothetical protein	NA	A0A2D2W284	Stenotrophomonas_phage	35.0	7.8e-07
AZV81692.1|693480_693879_+	hypothetical protein	NA	I6PCW1	Cronobacter_phage	38.0	4.2e-16
AZV81693.1|693875_694298_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81694.1|694305_694806_+	HNH endonuclease	NA	A0A1I9SEX5	Klebsiella_phage	45.1	4.4e-31
AZV81695.1|695060_695579_+|tail	phage tail protein	tail	A0A1S5R1H0	Pseudomonas_phage	38.3	5.4e-24
AZV81696.1|695588_695918_+	hypothetical protein	NA	A0A2H4J121	uncultured_Caudovirales_phage	44.0	2.9e-15
AZV81697.1|695935_696226_+	hypothetical protein	NA	A0A2H4JBP7	uncultured_Caudovirales_phage	45.2	3.7e-14
AZV81698.1|696251_698864_+|tail	phage tail tape measure protein	tail	A0A2H4J107	uncultured_Caudovirales_phage	38.6	4.9e-105
AZV81699.1|698873_699233_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81700.1|699300_699834_+	hypothetical protein	NA	A5A3Q9	Burkholderia_phage	46.9	1.1e-40
AZV81701.1|699830_700220_+	hypothetical protein	NA	A0A0G3EYJ9	Achromobacter_phage	50.0	3.0e-35
AZV81702.1|700212_704169_+	hypothetical protein	NA	A0A0B5A1N2	Achromobacter_phage	40.8	3.9e-215
>prophage 7
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	710335	764264	4108455	transposase,tRNA	Planktothrix_phage(50.0%)	47	NA	NA
AZV81715.1|710335_712066_+|tRNA	proline--tRNA ligase	tRNA	A0A2K9L3R9	Tupanvirus	29.4	4.6e-11
AZV81716.1|712118_712547_+	tol-pal system-associated acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZV81717.1|712549_713230_+	protein TolQ	NA	NA	NA	NA	NA
AZV81718.1|713229_713688_+	protein TolR	NA	NA	NA	NA	NA
AZV81719.1|713724_714699_+	protein TolA	NA	NA	NA	NA	NA
AZV81720.1|714715_716032_+	Tol-Pal system beta propeller repeat protein TolB	NA	NA	NA	NA	NA
AZV81721.1|716063_716561_+	peptidoglycan-associated lipoprotein	NA	NA	NA	NA	NA
AZV81722.1|716647_717337_+	tol-pal system protein YbgF	NA	NA	NA	NA	NA
AZV81723.1|717336_718386_+	iron-siderophore ABC transporter permease	NA	NA	NA	NA	NA
AZV81724.1|718382_719177_+	iron ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.4e-15
AZV81725.1|719345_719696_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81726.1|719671_720229_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81727.1|721358_722309_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81728.1|724446_725676_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81729.1|725678_727121_-	pyruvate kinase	NA	NA	NA	NA	NA
AZV81730.1|727225_728371_+	glycerate kinase	NA	W6LM47	Streptococcus_phage	42.2	1.7e-41
AZV81731.1|728402_729200_-	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase	NA	NA	NA	NA	NA
AZV81732.1|729224_730784_-	molecular chaperone SurA	NA	NA	NA	NA	NA
AZV81733.1|730780_733147_-	LPS biosynthesis protein	NA	NA	NA	NA	NA
AZV84491.1|733325_734366_+	aminoglycoside phosphotransferase	NA	NA	NA	NA	NA
AZV81734.1|734365_735058_+	mannose-1-phosphate guanylyltransferase	NA	NA	NA	NA	NA
AZV81735.1|735201_735903_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81736.1|735887_736265_-	4a-hydroxytetrahydrobiopterin dehydratase	NA	NA	NA	NA	NA
AZV81737.1|736996_737947_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81738.1|738106_738979_-	carboxyvinyl-carboxyphosphonate phosphorylmutase	NA	NA	NA	NA	NA
AZV81739.1|739319_739538_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81740.1|739577_740957_-	aspartate aminotransferase family protein	NA	NA	NA	NA	NA
AZV81741.1|740998_742396_-	amidase	NA	NA	NA	NA	NA
AZV81742.1|742435_744088_-	microcin ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.8	6.0e-16
AZV81743.1|744091_744976_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AZV81744.1|744975_745917_-	peptide ABC transporter	NA	NA	NA	NA	NA
AZV81745.1|745995_747615_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81746.1|747781_748597_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81747.1|748664_749234_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV81748.1|749234_750185_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81749.1|750838_751936_+	carboxynorspermidine decarboxylase	NA	NA	NA	NA	NA
AZV81750.1|751969_753235_+	saccharopine dehydrogenase	NA	NA	NA	NA	NA
AZV81751.1|753440_754343_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81752.1|754384_754540_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81753.1|754586_755177_+	polyisoprenoid-binding protein	NA	NA	NA	NA	NA
AZV84492.1|755192_757637_-	ligand-gated channel	NA	NA	NA	NA	NA
AZV81754.1|757756_758728_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81755.1|758859_759384_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZV81756.1|759343_760294_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81757.1|760515_762711_-	DNA methylase	NA	NA	NA	NA	NA
AZV84493.1|762783_763131_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV81758.1|763313_764264_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 8
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	860837	914968	4108455	transposase,holin	Vibrio_phage(25.0%)	44	NA	NA
AZV81833.1|860837_862796_-|holin	choline transporter	holin	A0A2I7QNT1	Vibrio_phage	30.3	8.0e-28
AZV81834.1|862878_863829_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81835.1|864049_864718_+	transcriptional regulator	NA	NA	NA	NA	NA
AZV81836.1|864841_865948_+	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZV81837.1|865960_869074_+	multidrug efflux protein	NA	S5VTK5	Leptospira_phage	21.5	4.5e-57
AZV81838.1|869070_870564_+	RND transporter	NA	NA	NA	NA	NA
AZV81839.1|870578_871250_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84501.1|871293_871746_-	azurin	NA	NA	NA	NA	NA
AZV81840.1|871928_872576_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84502.1|872679_874728_+	hydantoinase	NA	NA	NA	NA	NA
AZV81841.1|874724_876737_+	hydantoin utilization protein B	NA	NA	NA	NA	NA
AZV81842.1|876762_878097_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81843.1|878205_879198_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81844.1|879264_881349_-	rhodanese-like domain-containing protein	NA	NA	NA	NA	NA
AZV81845.1|881373_882345_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84503.1|882473_883475_-	peptidase M14	NA	NA	NA	NA	NA
AZV81846.1|883508_884660_-	cystathionine beta-lyase	NA	NA	NA	NA	NA
AZV81847.1|884863_885754_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81848.1|885831_886656_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZV84504.1|886852_887869_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV81849.1|888065_889049_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV81850.1|889107_890235_-	argininosuccinate lyase	NA	NA	NA	NA	NA
AZV81851.1|890225_890600_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81852.1|890647_892036_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81853.1|892066_893056_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81854.1|893166_894399_-	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZV81855.1|894680_895481_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV81856.1|895503_897735_-|holin	high-affinity choline transporter BetT	holin	NA	NA	NA	NA
AZV81857.1|898522_898969_-	preprotein translocase subunit SecG	NA	NA	NA	NA	NA
AZV81858.1|898990_899737_-	triose-phosphate isomerase	NA	NA	NA	NA	NA
AZV81859.1|899880_900858_-	NAD(P)H-quinone oxidoreductase	NA	NA	NA	NA	NA
AZV81860.1|901491_902103_+	PIN domain-containing protein	NA	K4HZX4	Acidithiobacillus_phage	32.5	3.3e-12
AZV81861.1|902096_903314_-	threonine ammonia-lyase	NA	NA	NA	NA	NA
AZV81862.1|903454_904405_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81863.1|904401_905121_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81864.1|905241_907401_-	polyribonucleotide nucleotidyltransferase	NA	NA	NA	NA	NA
AZV81865.1|907491_907761_-	30S ribosomal protein S15	NA	NA	NA	NA	NA
AZV84505.1|908054_908582_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81866.1|908600_909380_-	CDP-diacylglycerol--serine O-phosphatidyltransferase	NA	NA	NA	NA	NA
AZV81867.1|909547_910564_-	ketol-acid reductoisomerase	NA	NA	NA	NA	NA
AZV81868.1|910636_911128_-	acetolactate synthase small subunit	NA	NA	NA	NA	NA
AZV81869.1|911138_912854_-	acetolactate synthase, large subunit, biosynthetic type	NA	A0A0P0CDR3	Ostreococcus_lucimarinus_virus	30.3	3.1e-60
AZV81870.1|913324_913936_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81871.1|914017_914968_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 9
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	939467	1001616	4108455	transposase	Bacillus_virus(15.38%)	57	NA	NA
AZV81892.1|939467_940370_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81893.1|940366_940750_-	Rieske (2Fe-2S) protein	NA	NA	NA	NA	NA
AZV81894.1|940804_942619_-	metal ABC transporter permease	NA	W8CYL7	Bacillus_phage	27.9	5.7e-44
AZV84507.1|942768_943596_+	oxidoreductase	NA	A0A2H4PQR8	Staphylococcus_phage	47.4	1.7e-67
AZV81895.1|943641_944622_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZV81896.1|944618_944831_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81897.1|944827_946009_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81898.1|946172_946907_+	serine/threonine protein phosphatase	NA	A0A2H4J0P0	uncultured_Caudovirales_phage	49.2	1.9e-62
AZV81899.1|946908_949521_-	penicillin-binding protein	NA	NA	NA	NA	NA
AZV81900.1|949656_951570_-	S9 family peptidase	NA	NA	NA	NA	NA
AZV81901.1|952185_952596_-	phenylacetic acid degradation protein	NA	NA	NA	NA	NA
AZV81902.1|952693_953779_+	DNA polymerase IV	NA	NA	NA	NA	NA
AZV81903.1|953925_954828_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81904.1|954824_955799_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81905.1|955944_956835_+	LysR family transcriptional regulator	NA	Q6JIH3	Burkholderia_virus	27.6	4.3e-05
AZV84508.1|957111_957504_-	hypothetical protein	NA	A0A0R6PJ17	Moraxella_phage	45.0	4.8e-25
AZV81906.1|957633_958584_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81907.1|958613_958796_-	addiction module toxin, HicA family	NA	A0A1L2JY37	Aeribacillus_phage	56.1	3.7e-12
AZV81908.1|959568_960750_-	MFS transporter	NA	NA	NA	NA	NA
AZV81909.1|960965_961643_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZV81910.1|961639_962365_-	bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase	NA	NA	NA	NA	NA
AZV81911.1|962490_963072_-	hypothetical protein	NA	NA	NA	NA	NA
AZV81912.1|963442_966124_+	DNA gyrase subunit A	NA	G3M9Z5	Bacillus_virus	33.5	3.2e-104
AZV84509.1|966126_967257_+	phosphoserine transaminase	NA	M1Q1P2	Streptococcus_phage	44.0	4.9e-78
AZV81913.1|967249_968335_+	chorismate mutase	NA	NA	NA	NA	NA
AZV81914.1|968421_969321_+	prephenate dehydrogenase	NA	NA	NA	NA	NA
AZV81915.1|969317_970646_+	3-phosphoshikimate 1-carboxyvinyltransferase	NA	NA	NA	NA	NA
AZV81916.1|970660_971332_+	cytidylate kinase	NA	NA	NA	NA	NA
AZV81917.1|971519_973235_+	30S ribosomal protein S1	NA	NA	NA	NA	NA
AZV81918.1|973236_973596_+	integration host factor subunit beta	NA	NA	NA	NA	NA
AZV81919.1|973787_974102_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81920.1|974144_975365_+	lipopolysaccharide assembly protein LapB	NA	NA	NA	NA	NA
AZV81921.1|975361_976303_+	hypothetical protein	NA	A0A2H4N7X4	Lake_Baikal_phage	28.1	1.5e-16
AZV81922.1|976299_977289_+	ADP-glyceromanno-heptose 6-epimerase	NA	E3SJ87	Synechococcus_phage	34.4	2.2e-26
AZV84510.1|977578_977908_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81923.1|978006_978957_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81924.1|979037_979949_+	cysteine synthase B	NA	A0A1X9I5K7	Streptococcus_phage	38.8	8.0e-47
AZV81925.1|980009_981155_-	lytic murein transglycosylase B	NA	NA	NA	NA	NA
AZV81926.1|981174_982089_+	deacetylase	NA	A0A2K9KZC4	Tupanvirus	34.7	9.8e-45
AZV81927.1|982160_982910_+	electron transporter RnfB	NA	NA	NA	NA	NA
AZV81928.1|982909_983839_+	electron transfer flavoprotein subunit alpha	NA	NA	NA	NA	NA
AZV81929.1|984082_985909_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV81930.1|985991_986633_+	peroxidase	NA	NA	NA	NA	NA
AZV81931.1|986822_987857_+	sulfate transporter subunit	NA	NA	NA	NA	NA
AZV81932.1|987872_988076_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81933.1|988097_988772_+	sulfate ABC transporter permease subunit CysT	NA	NA	NA	NA	NA
AZV81934.1|988886_989669_+	sulfate ABC transporter permease subunit CysW	NA	NA	NA	NA	NA
AZV81935.1|989693_990758_+	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	30.3	3.8e-24
AZV84511.1|991555_992464_+	sulfate adenylyltransferase small subunit	NA	NA	NA	NA	NA
AZV81936.1|993951_995226_+	radical SAM protein	NA	NA	NA	NA	NA
AZV81937.1|995379_995760_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81938.1|995767_996640_-	multidrug DMT transporter permease	NA	NA	NA	NA	NA
AZV81939.1|996945_997326_+	50S ribosomal protein L19	NA	NA	NA	NA	NA
AZV81940.1|997575_998262_+	coenzyme A pyrophosphatase	NA	NA	NA	NA	NA
AZV81941.1|998357_999308_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81942.1|999412_1000462_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZV84512.1|1000599_1001616_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 10
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	1047322	1117872	4108455	transposase,tRNA	uncultured_Mediterranean_phage(30.0%)	59	NA	NA
AZV81974.1|1047322_1048273_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV81975.1|1048571_1049309_-	RNA polymerase sigma factor FliA	NA	NA	NA	NA	NA
AZV81976.1|1049744_1050068_+	flagellar transcriptional activator FlhD	NA	NA	NA	NA	NA
AZV81977.1|1050102_1050663_+	transcriptional regulator FlhC	NA	NA	NA	NA	NA
AZV81978.1|1050783_1051659_+	flagellar motor stator protein MotA	NA	NA	NA	NA	NA
AZV81979.1|1051671_1052619_+	flagellar motor protein MotB	NA	NA	NA	NA	NA
AZV81980.1|1052720_1053014_+	two-component system response regulator	NA	NA	NA	NA	NA
AZV81981.1|1053040_1055098_+	chemotaxis protein CheA	NA	NA	NA	NA	NA
AZV81982.1|1055112_1055613_+	chemotaxis protein CheW	NA	NA	NA	NA	NA
AZV81983.1|1055686_1057393_+	chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	41.7	1.4e-12
AZV81984.1|1058256_1059309_+	chemotaxis response regulator protein-glutamate methylesterase	NA	NA	NA	NA	NA
AZV81985.1|1059361_1059751_+	two-component system response regulator	NA	Q56AR1	Bacillus_thuringiensis_phage	33.3	5.7e-10
AZV81986.1|1059759_1060392_+	protein phosphatase CheZ	NA	NA	NA	NA	NA
AZV84517.1|1060491_1061508_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV84518.1|1062338_1063346_+	aldo/keto reductase	NA	NA	NA	NA	NA
AZV81987.1|1063342_1064986_-	apolipoprotein N-acyltransferase	NA	NA	NA	NA	NA
AZV81988.1|1064982_1065870_-	magnesium/cobalt efflux protein	NA	NA	NA	NA	NA
AZV81989.1|1066010_1066484_-	rRNA maturation RNase YbeY	NA	NA	NA	NA	NA
AZV81990.1|1066473_1067496_-	phosphate starvation-inducible protein PhoH	NA	A0A0S0MVD6	Pseudomonas_phage	45.4	8.7e-50
AZV81991.1|1067492_1068920_-|tRNA	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	tRNA	NA	NA	NA	NA
AZV84519.1|1069857_1070874_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV81992.1|1071206_1072142_-	protein-export membrane protein SecF	NA	A0A1B1IVP7	uncultured_Mediterranean_phage	35.5	3.0e-41
AZV81993.1|1072191_1074072_-	protein-export membrane protein SecD	NA	NA	NA	NA	NA
AZV81994.1|1074138_1074483_-	preprotein translocase subunit YajC	NA	A0A1B1IVR5	uncultured_Mediterranean_phage	40.4	1.0e-10
AZV81995.1|1074627_1075764_-|tRNA	tRNA guanosine(34) transglycosylase Tgt	tRNA	A0A1B1IVQ4	uncultured_Mediterranean_phage	44.4	1.9e-85
AZV81996.1|1075760_1076834_-|tRNA	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	tRNA	NA	NA	NA	NA
AZV81997.1|1076991_1078428_+	D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase	NA	NA	NA	NA	NA
AZV84520.1|1078518_1079160_+	uracil phosphoribosyltransferase	NA	NA	NA	NA	NA
AZV84521.1|1079494_1080511_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV81998.1|1080843_1083591_+	pertactin	NA	NA	NA	NA	NA
AZV84522.1|1083657_1085079_-	uroporphyrinogen-III C-methyltransferase	NA	NA	NA	NA	NA
AZV84523.1|1085345_1086059_+	hypothetical protein	NA	NA	NA	NA	NA
AZV81999.1|1086143_1086461_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82000.1|1086501_1086915_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82001.1|1086916_1087276_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82002.1|1087318_1088863_-	3-octaprenyl-4-hydroxybenzoate decarboxylase	NA	NA	NA	NA	NA
AZV82003.1|1088946_1089777_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZV82004.1|1089811_1090966_-	aminotransferase	NA	NA	NA	NA	NA
AZV82005.1|1091008_1091881_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82006.1|1091997_1094286_+	NADP-dependent malic enzyme	NA	NA	NA	NA	NA
AZV82007.1|1095492_1095957_+	barstar family protein 2	NA	NA	NA	NA	NA
AZV82008.1|1095983_1096934_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84524.1|1097301_1098078_-	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	28.7	4.3e-17
AZV82009.1|1098122_1098959_-	phosphate ABC transporter, permease protein PstA	NA	NA	NA	NA	NA
AZV82010.1|1099001_1100018_-	phosphate ABC transporter permease subunit PstC	NA	NA	NA	NA	NA
AZV82011.1|1100152_1101193_-	phosphate ABC transporter substrate-binding protein PstS	NA	M4QHS4	Cyanophage	40.2	2.1e-51
AZV82012.1|1101387_1103469_-	RNA degradosome polyphosphate kinase	NA	NA	NA	NA	NA
AZV82013.1|1103704_1105198_+	exopolyphosphatase	NA	NA	NA	NA	NA
AZV82014.1|1105428_1106223_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV82015.1|1106443_1107802_-	phosphoglucosamine mutase	NA	NA	NA	NA	NA
AZV82016.1|1107798_1108641_-	dihydropteroate synthase	NA	A0A0B5J4J5	Pandoravirus	32.5	3.2e-26
AZV82017.1|1108659_1110546_-	cell division protein FtsH	NA	M4QMW8	Micromonas_pusilla_virus	41.5	1.4e-109
AZV82018.1|1110783_1111416_-	rRNA methyltransferase	NA	NA	NA	NA	NA
AZV82019.1|1111434_1112037_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82020.1|1112482_1112884_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82021.1|1113941_1114742_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82022.1|1114785_1115772_-	homoserine kinase	NA	NA	NA	NA	NA
AZV82023.1|1115947_1116925_+|tRNA	tRNA dihydrouridine(20/20a) synthase DusA	tRNA	NA	NA	NA	NA
AZV82024.1|1116921_1117872_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 11
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	1318990	1384419	4108455	transposase	Planktothrix_phage(33.33%)	60	NA	NA
AZV82180.1|1318990_1319941_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82181.1|1320709_1321348_-	glutathione S-transferase	NA	NA	NA	NA	NA
AZV84539.1|1322237_1322684_+	glutamate racemase	NA	NA	NA	NA	NA
AZV82182.1|1322765_1323467_-	branched-chain amino acid ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.4	1.3e-17
AZV82183.1|1323467_1324235_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2H4PQG7	Staphylococcus_phage	26.4	1.2e-14
AZV82184.1|1324231_1325470_-	high-affinity branched-chain amino acid ABC transporter permease LivM	NA	NA	NA	NA	NA
AZV82185.1|1325469_1326396_-	branched-chain amino acid ABC transporter permease LivH	NA	NA	NA	NA	NA
AZV82186.1|1326498_1327614_-	leucine ABC transporter subunit substrate-binding protein LivK	NA	NA	NA	NA	NA
AZV82187.1|1327629_1328580_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82188.1|1328933_1329515_-	hypothetical protein	NA	A0A2I7SAW6	Vibrio_phage	37.3	9.4e-17
AZV82189.1|1329511_1330345_-	pyrroline-5-carboxylate reductase	NA	NA	NA	NA	NA
AZV84540.1|1330555_1331869_+	sn-glycerol-3-phosphate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82190.1|1332045_1332927_+	glycerol-3-phosphate transporter permease	NA	NA	NA	NA	NA
AZV82191.1|1332946_1333798_+	glycerol-3-phosphate transporter	NA	NA	NA	NA	NA
AZV82192.1|1333850_1334939_+	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	NA	G9BWD6	Planktothrix_phage	31.2	2.2e-19
AZV82193.1|1335049_1336177_-	leucine ABC transporter subunit substrate-binding protein LivK	NA	NA	NA	NA	NA
AZV84541.1|1336411_1337023_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV82194.1|1337169_1338072_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82195.1|1338051_1338336_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82196.1|1338293_1338671_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84542.1|1338818_1339316_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82197.1|1339312_1339840_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82198.1|1339973_1340789_+	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82199.1|1340801_1341983_-	alpha-hydroxy-acid oxidizing enzyme	NA	NA	NA	NA	NA
AZV82200.1|1342030_1342924_-	phosphatidylserine decarboxylase	NA	NA	NA	NA	NA
AZV84543.1|1343050_1343521_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82201.1|1343646_1344474_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82202.1|1344502_1345279_-	lipoate--protein ligase	NA	NA	NA	NA	NA
AZV82203.1|1345275_1345551_-	biotin--protein ligase	NA	NA	NA	NA	NA
AZV82204.1|1345565_1346030_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV82205.1|1346041_1346743_-	thiol:disulfide oxidoreductase	NA	NA	NA	NA	NA
AZV82206.1|1346852_1347353_-	glutathione peroxidase	NA	Q6VZR0	Canarypox_virus	38.4	4.7e-25
AZV82207.1|1347435_1348614_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84544.1|1350250_1350577_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82208.1|1350764_1352213_+	carnitine dehydratase	NA	NA	NA	NA	NA
AZV84545.1|1352270_1352615_+	arsenate reductase (glutaredoxin)	NA	A0A2H4J8T1	uncultured_Caudovirales_phage	58.4	3.0e-31
AZV82209.1|1352721_1353261_-	peroxiredoxin	NA	NA	NA	NA	NA
AZV82210.1|1353353_1354256_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82211.1|1354402_1355305_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82212.1|1355451_1355859_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82213.1|1356091_1356523_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82214.1|1356704_1357109_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82215.1|1358345_1358669_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82216.1|1358671_1359559_-	aldo/keto reductase	NA	NA	NA	NA	NA
AZV82217.1|1359591_1360017_-	universal stress protein	NA	NA	NA	NA	NA
AZV82218.1|1360088_1360442_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82219.1|1360681_1361188_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82220.1|1361226_1362558_-	transcriptional regulator PtsJ	NA	NA	NA	NA	NA
AZV82221.1|1362617_1363433_+	YggS family pyridoxal phosphate enzyme	NA	NA	NA	NA	NA
AZV82222.1|1363429_1364284_+	bifunctional pyridoxal kinase/hydroxymethylpyrimidine kinase	NA	NA	NA	NA	NA
AZV84546.1|1367346_1369890_-	malto-oligosyltrehalose synthase	NA	NA	NA	NA	NA
AZV82223.1|1369886_1370828_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82224.1|1370812_1371196_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82225.1|1371256_1373011_-	malto-oligosyltrehalose trehalohydrolase	NA	NA	NA	NA	NA
AZV82226.1|1373007_1375128_-	glycogen debranching enzyme GlgX	NA	NA	NA	NA	NA
AZV82227.1|1375132_1377328_-	1,4-alpha-glucan branching enzyme	NA	NA	NA	NA	NA
AZV84547.1|1377324_1380666_-	maltose alpha-D-glucosyltransferase	NA	NA	NA	NA	NA
AZV82228.1|1380677_1382210_-	alpha-amylase	NA	NA	NA	NA	NA
AZV82229.1|1382203_1383346_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82230.1|1383468_1384419_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 12
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	1492248	1554228	4108455	transposase,tRNA	Planktothrix_phage(28.57%)	55	NA	NA
AZV82320.1|1492248_1493151_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82321.1|1493316_1494243_+	paraslipin	NA	NA	NA	NA	NA
AZV82322.1|1494308_1495466_+	GGDEF domain-containing protein	NA	A0A127AWB9	Bacillus_phage	36.2	2.3e-14
AZV82323.1|1495446_1495914_-	SsrA-binding protein	NA	W5RAM5	Staphylococcus_phage	45.1	6.2e-27
AZV82324.1|1496109_1497012_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82325.1|1497028_1497463_+	ubiquinone-binding protein	NA	NA	NA	NA	NA
AZV82326.1|1497452_1497803_+	RnfH family protein	NA	NA	NA	NA	NA
AZV82327.1|1497999_1499154_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV82328.1|1499150_1500323_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV82329.1|1500370_1501264_+	3-hydroxyisobutyrate dehydrogenase	NA	NA	NA	NA	NA
AZV82330.1|1501309_1501747_+	thioesterase	NA	NA	NA	NA	NA
AZV82331.1|1501806_1502496_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82332.1|1502505_1503408_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82333.1|1503554_1504517_-	transaldolase	NA	H6WFR1	Cyanophage	29.2	7.5e-11
AZV82334.1|1504743_1505898_+	carbamoyl phosphate synthase small subunit	NA	R4TGJ8	Halovirus	35.4	3.3e-53
AZV82335.1|1505908_1509151_+	carbamoyl phosphate synthase large subunit	NA	NA	NA	NA	NA
AZV82336.1|1510172_1510817_-	histidine phosphatase family protein	NA	NA	NA	NA	NA
AZV82337.1|1510827_1511727_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82338.1|1511774_1512860_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	6.4e-27
AZV82339.1|1512856_1514551_-	ABC transporter permease	NA	NA	NA	NA	NA
AZV82340.1|1514729_1515680_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82341.1|1515821_1516124_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82342.1|1516139_1517192_+	diguanylate cyclase	NA	NA	NA	NA	NA
AZV82343.1|1517233_1518295_+	chorismate synthase	NA	A0A291AU41	Pandoravirus	42.8	2.9e-80
AZV82344.1|1518328_1519165_+	peptidase M48	NA	NA	NA	NA	NA
AZV82345.1|1519174_1519717_-	molybdopterin-guanine dinucleotide biosynthesis protein B	NA	NA	NA	NA	NA
AZV82346.1|1519730_1521023_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZV82347.1|1521019_1521613_-	molybdenum cofactor guanylyltransferase MobA	NA	NA	NA	NA	NA
AZV82348.1|1521765_1522863_+	MRP family ATP-binding protein	NA	NA	NA	NA	NA
AZV82349.1|1522869_1523430_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82350.1|1523426_1524107_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84556.1|1524163_1526221_+	4Fe-4S ferredoxin	NA	NA	NA	NA	NA
AZV82351.1|1526217_1526847_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82352.1|1526998_1527208_+	formate dehydrogenase	NA	NA	NA	NA	NA
AZV82353.1|1527222_1530192_+	formate dehydrogenase	NA	NA	NA	NA	NA
AZV82354.1|1530826_1531060_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82355.1|1531072_1532230_+	formate dehydrogenase subunit gamma	NA	NA	NA	NA	NA
AZV82356.1|1532252_1532627_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82357.1|1532660_1533776_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82358.1|1534675_1535380_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.0	2.6e-13
AZV82359.1|1535376_1536195_+	tungsten ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82360.1|1536478_1537882_+	3-isopropylmalate dehydratase large subunit	NA	NA	NA	NA	NA
AZV84557.1|1537896_1538547_+	3-isopropylmalate dehydratase small subunit	NA	NA	NA	NA	NA
AZV82361.1|1538628_1539705_+	3-isopropylmalate dehydrogenase	NA	NA	NA	NA	NA
AZV82362.1|1539891_1541022_+	aspartate-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZV82363.1|1541192_1542776_+	peptidoglycan-binding protein LysM	NA	NA	NA	NA	NA
AZV82364.1|1542779_1543592_+|tRNA	tRNA pseudouridine(38-40) synthase TruA	tRNA	NA	NA	NA	NA
AZV82365.1|1543736_1544831_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82366.1|1545042_1545672_+	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82367.1|1545674_1547342_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZV82368.1|1547356_1548013_+	N-(5'-phosphoribosyl)anthranilate isomerase	NA	NA	NA	NA	NA
AZV82369.1|1548540_1549443_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82370.1|1549469_1550243_+	peroxide stress protein YaaA	NA	NA	NA	NA	NA
AZV82371.1|1550254_1551496_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82372.1|1553325_1554228_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 14
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	1656062	1727168	4108455	transposase	Ectocarpus_siliculosus_virus(11.11%)	55	NA	NA
AZV82465.1|1656062_1657013_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82466.1|1657034_1658255_+	YggW family oxidoreductase	NA	NA	NA	NA	NA
AZV82467.1|1658440_1659853_+	type I glutamate--ammonia ligase	NA	NA	NA	NA	NA
AZV82468.1|1659916_1660984_+	PAS domain-containing sensor histidine kinase	NA	Q8QKV7	Ectocarpus_siliculosus_virus	23.5	1.1e-05
AZV82469.1|1660983_1662471_+	nitrogen regulation protein NR(I)	NA	NA	NA	NA	NA
AZV84563.1|1662480_1663425_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82470.1|1663584_1664283_+	quercetin 2,3-dioxygenase	NA	NA	NA	NA	NA
AZV82471.1|1664360_1665266_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82472.1|1665285_1666188_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82473.1|1666334_1667129_-	ABC transporter	NA	G9BWD6	Planktothrix_phage	29.4	8.3e-16
AZV82474.1|1667133_1668804_-	iron ABC transporter permease	NA	NA	NA	NA	NA
AZV82475.1|1668927_1669977_-	iron ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82476.1|1670298_1671075_+	ferredoxin--NADP(+) reductase	NA	NA	NA	NA	NA
AZV82477.1|1671139_1672042_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82478.1|1673335_1674139_+	2,5-didehydrogluconate reductase B	NA	A0A2H4PQR8	Staphylococcus_phage	32.4	2.0e-33
AZV82479.1|1676832_1677219_+	reactive intermediate/imine deaminase	NA	NA	NA	NA	NA
AZV82480.1|1677234_1679325_+	ATP-dependent DNA helicase RecG	NA	NA	NA	NA	NA
AZV82481.1|1679376_1680330_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	26.5	7.2e-14
AZV84564.1|1680344_1681232_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82482.1|1681369_1682896_+	methylmalonate-semialdehyde dehydrogenase (acylating)	NA	NA	NA	NA	NA
AZV84565.1|1682994_1683495_+	DNA starvation/stationary phase protection protein	NA	W5S6G8	Pithovirus	35.5	6.4e-14
AZV82483.1|1683818_1685774_-	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZV82484.1|1685941_1688026_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84566.1|1688052_1688478_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82485.1|1689693_1690464_+	polyhydroxyalkanoate biosynthesis repressor PhaR	NA	NA	NA	NA	NA
AZV82486.1|1690463_1691204_+	sugar ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZV82487.1|1691245_1692415_+	capsule biosynthesis protein	NA	NA	NA	NA	NA
AZV82488.1|1692446_1694531_+	Vi polysaccharide biosynthesis protein TviE	NA	NA	NA	NA	NA
AZV82489.1|1694527_1695418_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZV82490.1|1695414_1696512_+	capsule biosynthesis protein CapA	NA	NA	NA	NA	NA
AZV82491.1|1696534_1697824_+	Vi polysaccharide biosynthesis protein VipA/TviB	NA	NA	NA	NA	NA
AZV82492.1|1697835_1698861_+	LPS biosynthesis protein WbpP	NA	A0A2K9L4U8	Tupanvirus	44.2	4.7e-72
AZV82493.1|1698857_1700915_+	beta-3-deoxy-D-manno-oct-2-ulosonic acid transferase	NA	NA	NA	NA	NA
AZV82494.1|1700928_1702104_+	capsule biosynthesis protein CapA	NA	NA	NA	NA	NA
AZV82495.1|1702185_1703136_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82496.1|1703194_1703968_+	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZV82497.1|1703960_1705517_+	capsular biosynthesis protein	NA	NA	NA	NA	NA
AZV82498.1|1705513_1706464_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82499.1|1707790_1708393_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82500.1|1708632_1709334_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZV82501.1|1709327_1710110_-	high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivG	NA	A0A2R8FG22	Brazilian_cedratvirus	25.8	2.0e-09
AZV82502.1|1710294_1711245_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82503.1|1711343_1712081_-	hypothetical protein	NA	A0A0S4KZH7	Pseudomonas_phage	46.6	4.1e-41
AZV82504.1|1712270_1713029_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZV82505.1|1713075_1714077_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82506.1|1714242_1715211_-	phenol degradation protein meta	NA	NA	NA	NA	NA
AZV82507.1|1716750_1717719_+	AAA family ATPase	NA	NA	NA	NA	NA
AZV82508.1|1717727_1718669_+	MoxR protein	NA	NA	NA	NA	NA
AZV84567.1|1719142_1720153_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84569.1|1720143_1721658_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82509.1|1721654_1723001_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84568.1|1723003_1724038_+	haloacid dehalogenase	NA	NA	NA	NA	NA
AZV82510.1|1724087_1725713_+	arylsulfatase	NA	A0A2P0VMN7	Tetraselmis_virus	52.2	2.0e-149
AZV82511.1|1725806_1726286_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82512.1|1726265_1727168_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 15
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	1748007	1809355	4108455	transposase,tRNA	uncultured_Caudovirales_phage(12.5%)	54	NA	NA
AZV82528.1|1748007_1748958_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82529.1|1749066_1749255_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84573.1|1749251_1749974_-	arsenical resistance protein ArsH	NA	A0A2H4J5V6	uncultured_Caudovirales_phage	68.2	1.3e-87
AZV82530.1|1750412_1751600_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84574.1|1751603_1751954_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV82531.1|1752187_1753600_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82532.1|1753703_1754675_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82533.1|1754688_1755402_+	3-oxoacyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA	NA
AZV82534.1|1755406_1756324_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82535.1|1756430_1756727_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82536.1|1756825_1757776_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82537.1|1758934_1761868_+	monovalent cation/H+ antiporter subunit A	NA	NA	NA	NA	NA
AZV82538.1|1761867_1762212_+	Na+/H+ antiporter subunit C	NA	NA	NA	NA	NA
AZV82539.1|1762208_1763837_+	monovalent cation/H+ antiporter subunit D	NA	NA	NA	NA	NA
AZV82540.1|1763836_1764313_+	Na+/H+ antiporter subunit E	NA	NA	NA	NA	NA
AZV82541.1|1764312_1764594_+	K+/H+ antiporter subunit F	NA	NA	NA	NA	NA
AZV82542.1|1764590_1764917_+	cation:proton antiporter	NA	NA	NA	NA	NA
AZV82543.1|1765072_1766023_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82544.1|1766066_1766609_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82545.1|1766706_1767555_+	hydrolase	NA	NA	NA	NA	NA
AZV84575.1|1767604_1768054_+|tRNA	tRNA-specific adenosine deaminase	tRNA	S4VYT2	Pandoravirus	38.2	2.0e-06
AZV82546.1|1768050_1769052_+	LD-carboxypeptidase	NA	NA	NA	NA	NA
AZV82547.1|1769064_1769859_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV82548.1|1769907_1771809_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZV82549.1|1771805_1772429_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82550.1|1772555_1773680_-	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZV82551.1|1774060_1775665_+	ABC-F family ATPase	NA	A0A1V0SKJ1	Klosneuvirus	28.9	1.2e-53
AZV82552.1|1775820_1776597_+	ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	34.2	1.2e-30
AZV82553.1|1776681_1777680_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82554.1|1777676_1778450_+	ABC transporter permease	NA	NA	NA	NA	NA
AZV82555.1|1779434_1780385_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82556.1|1780408_1780873_-|tRNA	glutamyl-tRNA amidotransferase	tRNA	A0A0K2FLI9	Brevibacillus_phage	32.4	3.9e-05
AZV82557.1|1781019_1782228_+	nitric oxide dioxygenase	NA	NA	NA	NA	NA
AZV82558.1|1782271_1782709_+	BadM/Rrf2 family transcriptional regulator	NA	NA	NA	NA	NA
AZV82559.1|1782827_1784117_+	D-amino acid dehydrogenase small subunit	NA	NA	NA	NA	NA
AZV82560.1|1786857_1787760_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82561.1|1787906_1788923_-	folate-binding protein YgfZ	NA	NA	NA	NA	NA
AZV82562.1|1789101_1790136_+	aminodeoxychorismate lyase	NA	NA	NA	NA	NA
AZV82563.1|1790132_1790759_+	dTMP kinase	NA	A0A1L2BX49	Bacteriophage	35.1	1.6e-22
AZV82564.1|1790755_1791808_+	DNA polymerase III subunit delta'	NA	NA	NA	NA	NA
AZV82565.1|1791857_1792628_+	DNAase	NA	NA	NA	NA	NA
AZV82566.1|1792678_1793515_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82567.1|1793710_1794451_+	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82568.1|1794525_1795269_+	glutamine ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82569.1|1795930_1796704_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	37.7	3.1e-31
AZV82570.1|1797841_1799131_+	glutamate dehydrogenase	NA	NA	NA	NA	NA
AZV82571.1|1800741_1801989_-	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZV82572.1|1801998_1803708_-	thiamine pyrophosphate-binding protein	NA	A0A0P0YLY7	Yellowstone_lake_phycodnavirus	27.3	5.9e-35
AZV82573.1|1803704_1804643_-	CoA ester lyase	NA	NA	NA	NA	NA
AZV82574.1|1804639_1805923_-	C4-dicarboxylate ABC transporter permease	NA	NA	NA	NA	NA
AZV82575.1|1805926_1806409_-	TRAP transporter small permease protein	NA	NA	NA	NA	NA
AZV82576.1|1806409_1807396_-	C4-dicarboxylate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82577.1|1807568_1808288_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82578.1|1808404_1809355_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 16
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	1927323	1998870	4108455	transposase,tRNA	Faecalibacterium_phage(33.33%)	59	NA	NA
AZV82656.1|1927323_1928226_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82657.1|1930106_1931819_-	ShlB-type family protein	NA	NA	NA	NA	NA
AZV82658.1|1932275_1933094_+	signal protein	NA	NA	NA	NA	NA
AZV82659.1|1933191_1933368_+	pili assembly chaperone	NA	NA	NA	NA	NA
AZV82660.1|1933437_1933962_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84586.1|1933931_1934366_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82661.1|1934367_1934844_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82662.1|1934840_1935782_+	Flp pilus assembly protein CpaB	NA	NA	NA	NA	NA
AZV82663.1|1935879_1937187_+	type II secretion system protein	NA	NA	NA	NA	NA
AZV82664.1|1937183_1938533_+	pilus assembly protein CpaE	NA	NA	NA	NA	NA
AZV82665.1|1939891_1940812_+	type II secretion protein F	NA	NA	NA	NA	NA
AZV82666.1|1940820_1941807_+	type II secretion protein F	NA	NA	NA	NA	NA
AZV82667.1|1941806_1942649_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82668.1|1943072_1945316_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82669.1|1945337_1946729_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZV82670.1|1946808_1947504_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82671.1|1947603_1948071_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84587.1|1948128_1948833_+	RNA polymerase subunit sigma	NA	NA	NA	NA	NA
AZV82672.1|1948979_1949549_+	ferritin	NA	NA	NA	NA	NA
AZV82673.1|1949545_1949956_+	cytochrome c family protein	NA	NA	NA	NA	NA
AZV82674.1|1950075_1950633_-	elongation factor P	NA	NA	NA	NA	NA
AZV82675.1|1950775_1951888_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82676.1|1951903_1953106_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82677.1|1953314_1954052_+	dioxygenase	NA	NA	NA	NA	NA
AZV82678.1|1954160_1956866_-	aconitate hydratase 1	NA	NA	NA	NA	NA
AZV82679.1|1957103_1957706_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82680.1|1957982_1960187_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZV82681.1|1960349_1961084_+	haloacid dehalogenase, type II	NA	NA	NA	NA	NA
AZV82682.1|1961160_1962111_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82683.1|1962209_1963112_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82684.1|1963241_1963790_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82685.1|1963792_1964131_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82686.1|1964525_1967117_-	bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase	NA	NA	NA	NA	NA
AZV84588.1|1967399_1967927_+	DNA polymerase III subunit epsilon	NA	A0A2K9V2V7	Faecalibacterium_phage	31.8	4.0e-06
AZV82687.1|1967939_1968326_+	nucleotide pyrophosphohydrolase	NA	NA	NA	NA	NA
AZV82688.1|1968332_1968623_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZV82689.1|1968758_1969058_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82690.1|1969126_1970029_+	EamA family transporter	NA	NA	NA	NA	NA
AZV82691.1|1970032_1970803_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82692.1|1971188_1971638_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82693.1|1971705_1972656_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82694.1|1973017_1973929_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82695.1|1974154_1975672_+	propionyl-CoA--succinate CoA transferase	NA	NA	NA	NA	NA
AZV82696.1|1976903_1977866_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82697.1|1977954_1978203_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82698.1|1984758_1985202_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82699.1|1985266_1985539_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV82700.1|1985535_1986483_-	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV82701.1|1986664_1988059_+	amidase	NA	NA	NA	NA	NA
AZV82702.1|1988081_1988477_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82703.1|1988473_1989733_-	glutamate-5-semialdehyde dehydrogenase	NA	A0A1X9I5D4	Streptococcus_phage	45.7	1.1e-91
AZV82704.1|1989854_1990910_-	DNA polymerase III subunit delta	NA	NA	NA	NA	NA
AZV82705.1|1990912_1991572_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82706.1|1991587_1994245_-|tRNA	leucine--tRNA ligase	tRNA	A0A2H4PQS0	Staphylococcus_phage	39.0	3.3e-173
AZV84589.1|1994322_1995480_-	MFS transporter	NA	NA	NA	NA	NA
AZV82707.1|1995521_1996034_-	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82708.1|1996156_1996594_-	DNA-binding protein	NA	NA	NA	NA	NA
AZV82709.1|1996918_1997821_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82710.1|1997967_1998870_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 17
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2040326	2077806	4108455	transposase	Erysipelothrix_phage(100.0%)	36	NA	NA
AZV82743.1|2040326_2041229_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82744.1|2042147_2043020_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV82745.1|2043097_2044237_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82746.1|2044595_2045852_+	ring-hydroxylating oxygenase subunit alpha	NA	NA	NA	NA	NA
AZV82747.1|2045857_2046385_+	ring-hydroxylating dioxygenase subunit beta	NA	NA	NA	NA	NA
AZV82748.1|2046389_2047208_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV82749.1|2047207_2047930_+	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZV82750.1|2047951_2048266_+	2Fe-2S ferredoxin	NA	NA	NA	NA	NA
AZV82751.1|2048283_2049432_+	carnitine dehydratase	NA	NA	NA	NA	NA
AZV82752.1|2049462_2050338_-	esterase	NA	NA	NA	NA	NA
AZV82753.1|2050334_2051654_-	acyl--CoA ligase	NA	NA	NA	NA	NA
AZV82754.1|2051726_2052923_-	acetyl-CoA acetyltransferase	NA	NA	NA	NA	NA
AZV82755.1|2052933_2054304_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82756.1|2054661_2056488_-	DUF3604 domain-containing protein	NA	NA	NA	NA	NA
AZV82757.1|2057015_2057915_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82758.1|2058052_2059018_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82759.1|2059116_2060067_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82760.1|2060288_2061239_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82761.1|2061235_2061538_-	SelT/selW/selH domain protein	NA	NA	NA	NA	NA
AZV82762.1|2061697_2062102_+	preprotein translocase subunit TatC	NA	NA	NA	NA	NA
AZV82763.1|2062094_2063321_+	NnrS family protein	NA	NA	NA	NA	NA
AZV82764.1|2063317_2063764_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82765.1|2063833_2064616_+	exodeoxyribonuclease III	NA	NA	NA	NA	NA
AZV82766.1|2064657_2066163_+	microcystin degradation protein MlrC	NA	NA	NA	NA	NA
AZV84592.1|2066448_2067243_-	oxidoreductase	NA	NA	NA	NA	NA
AZV82767.1|2067239_2067815_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82768.1|2067893_2068688_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82769.1|2068719_2069541_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV82770.1|2069559_2070414_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
AZV82771.1|2070417_2071389_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82772.1|2071463_2072102_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82773.1|2072735_2073686_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82774.1|2073672_2074677_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82775.1|2074823_2075120_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82776.1|2075294_2076647_+	glutathione-disulfide reductase	NA	A0A2K5B2C5	Erysipelothrix_phage	27.6	2.9e-45
AZV84593.1|2076789_2077806_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 18
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2091012	2136374	4108455	transposase	Bacillus_phage(25.0%)	47	NA	NA
AZV82788.1|2091012_2091915_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84595.1|2092037_2092517_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV82789.1|2092615_2093566_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82790.1|2093649_2095467_+	ABC transporter ATP-binding protein	NA	W8CYL7	Bacillus_phage	27.4	2.3e-37
AZV84596.1|2095594_2096188_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82791.1|2096200_2097130_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82792.1|2097299_2097764_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82793.1|2098011_2098692_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82794.1|2098740_2100432_+	sodium-independent anion transporter	NA	A0A2H4J153	uncultured_Caudovirales_phage	27.3	5.0e-42
AZV82795.1|2100447_2100999_-	ATPase	NA	NA	NA	NA	NA
AZV82796.1|2100995_2101367_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV82797.1|2101479_2102316_+	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV82798.1|2102326_2102806_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82799.1|2102948_2103128_+	DUF3008 domain-containing protein	NA	NA	NA	NA	NA
AZV82800.1|2103257_2104232_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZV82801.1|2104362_2104719_+	RNA signal recognition particle	NA	NA	NA	NA	NA
AZV84597.1|2104708_2105584_-	PhzF family phenazine biosynthesis protein	NA	NA	NA	NA	NA
AZV82802.1|2105682_2106567_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82803.1|2106588_2107884_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82804.1|2108832_2109483_+	NAD(P)H dehydrogenase	NA	NA	NA	NA	NA
AZV84598.1|2109570_2111091_-	aldehyde dehydrogenase	NA	NA	NA	NA	NA
AZV82805.1|2111348_2113214_+	sigma-54-dependent Fis family transcriptional regulator	NA	NA	NA	NA	NA
AZV82806.1|2113297_2114161_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82807.1|2114259_2115162_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82808.1|2115308_2116211_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82809.1|2116495_2117146_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82810.1|2117231_2117591_-	CidA/LrgA family protein	NA	NA	NA	NA	NA
AZV82811.1|2117578_2119015_-	dethiobiotin synthase	NA	NA	NA	NA	NA
AZV82812.1|2119011_2119665_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV82813.1|2119661_2120855_-	8-amino-7-oxononanoate synthase	NA	NA	NA	NA	NA
AZV82814.1|2120958_2122233_+	adenosylmethionine--8-amino-7-oxononanoate transaminase	NA	A0A1V0SKB7	Klosneuvirus	28.9	9.6e-14
AZV82815.1|2122229_2123132_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82816.1|2123346_2124321_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84599.1|2124317_2124461_+	cytochrome oxidase maturation protein, cbb3-type	NA	NA	NA	NA	NA
AZV82817.1|2126082_2126745_+	cytochrome-c oxidase, cbb3-type subunit II	NA	NA	NA	NA	NA
AZV82818.1|2126747_2126924_+	cytochrome oxidase	NA	NA	NA	NA	NA
AZV82819.1|2126920_2127859_+	cytochrome-c oxidase, cbb3-type subunit III	NA	NA	NA	NA	NA
AZV82820.1|2127950_2129441_+	cytochrome c oxidase accessory protein CcoG	NA	NA	NA	NA	NA
AZV82821.1|2129526_2129679_+	lipoprotein	NA	NA	NA	NA	NA
AZV82822.1|2129692_2129932_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82823.1|2130027_2130771_+	permease	NA	NA	NA	NA	NA
AZV84600.1|2130803_2131304_+	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV82824.1|2131402_2132326_+	multidrug ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	33.6	1.6e-23
AZV82825.1|2132322_2133084_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZV84601.1|2133099_2134182_-	AI-2E family transporter	NA	NA	NA	NA	NA
AZV82826.1|2134432_2135437_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82827.1|2135423_2136374_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 19
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2202848	2268395	4108455	protease,transposase,tRNA	Lake_Baikal_phage(21.43%)	60	NA	NA
AZV82879.1|2202848_2203751_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82880.1|2203999_2204809_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV82881.1|2204933_2205884_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82882.1|2205880_2206774_-	methylglyoxal synthase	NA	NA	NA	NA	NA
AZV82883.1|2206898_2207093_-	Fe-S assembly protein IscX	NA	NA	NA	NA	NA
AZV82884.1|2207092_2207434_-	ferredoxin, 2Fe-2S type, ISC system	NA	NA	NA	NA	NA
AZV82885.1|2207443_2209306_-	Fe-S protein assembly chaperone HscA	NA	A0A0N9QXN8	Chrysochromulina_ericina_virus	42.4	3.0e-101
AZV82886.1|2209435_2209948_-	Fe-S protein assembly co-chaperone HscB	NA	NA	NA	NA	NA
AZV82887.1|2209950_2210274_-	iron-sulfur cluster assembly protein IscA	NA	A0A2H4N7N5	Lake_Baikal_phage	52.8	6.8e-25
AZV82888.1|2210275_2210686_-	Fe-S cluster assembly scaffold IscU	NA	A0A218MKD1	uncultured_virus	79.0	7.5e-53
AZV82889.1|2210723_2211935_-	IscS subfamily cysteine desulfurase	NA	NA	NA	NA	NA
AZV82890.1|2211952_2212465_-	Fe-S cluster assembly transcriptional regulator IscR	NA	NA	NA	NA	NA
AZV82891.1|2212680_2213172_-	protein tyrosine phosphatase	NA	NA	NA	NA	NA
AZV82892.1|2213424_2215461_-	excinuclease ABC subunit B	NA	NA	NA	NA	NA
AZV82893.1|2215538_2216741_+	aromatic amino acid aminotransferase	NA	NA	NA	NA	NA
AZV82894.1|2216869_2217520_+	repressor LexA	NA	A0A2H4JG58	uncultured_Caudovirales_phage	50.7	3.3e-10
AZV82895.1|2217746_2218676_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZV82896.1|2218721_2219081_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82897.1|2219077_2220028_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV82898.1|2220597_2220810_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82899.1|2220827_2221559_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82900.1|2221593_2222235_-	succinyl-CoA--3-ketoacid-CoA transferase	NA	NA	NA	NA	NA
AZV82901.1|2222227_2222896_-	3-oxoadipate CoA-transferase	NA	NA	NA	NA	NA
AZV82902.1|2225108_2225885_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZV82903.1|2225906_2227064_-	thiolase	NA	NA	NA	NA	NA
AZV82904.1|2227060_2227492_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82905.1|2227488_2228286_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV82906.1|2228305_2228761_-	oxidoreductase	NA	NA	NA	NA	NA
AZV82907.1|2228773_2229745_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV82908.1|2229810_2231034_-	CoA transferase	NA	NA	NA	NA	NA
AZV82909.1|2231261_2232212_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV82910.1|2232335_2234789_-	endopeptidase La	NA	A0A0R6PGP8	Moraxella_phage	52.0	1.5e-220
AZV82911.1|2234977_2236282_-|protease	ATP-dependent protease ATP-binding subunit ClpX	protease	G3M9Z9	Bacillus_virus	53.8	3.2e-129
AZV82912.1|2236386_2237040_-	ATP-dependent Clp endopeptidase, proteolytic subunit ClpP	NA	A0A223W000	Agrobacterium_phage	57.5	6.8e-56
AZV82913.1|2237042_2238353_-	trigger factor	NA	NA	NA	NA	NA
AZV82914.1|2238549_2239110_+	TIGR00645 family protein	NA	K4K6D8	Caulobacter_phage	33.7	1.0e-23
AZV82915.1|2239221_2239422_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	64.4	7.4e-14
AZV82916.1|2239767_2240334_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82917.1|2240417_2240621_-	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	62.1	1.6e-16
AZV82918.1|2240927_2241248_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82919.1|2241289_2241571_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82920.1|2241645_2242902_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZV82921.1|2243284_2243614_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82922.1|2245183_2246005_+	2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase	NA	NA	NA	NA	NA
AZV82923.1|2246004_2247144_+	succinyl-diaminopimelate desuccinylase	NA	NA	NA	NA	NA
AZV82924.1|2247150_2248047_+	ribosomal protein L3 N(5)-glutamine methyltransferase	NA	NA	NA	NA	NA
AZV82925.1|2248061_2249969_+	ABC transporter	NA	A0A2K9L0W2	Tupanvirus	31.8	1.1e-66
AZV82926.1|2250328_2252941_+	TonB-dependent receptor	NA	NA	NA	NA	NA
AZV82927.1|2252993_2255294_-	DNA helicase II	NA	A7KV33	Bacillus_phage	35.9	9.9e-110
AZV82928.1|2255290_2256499_-	acyl-CoA desaturase	NA	NA	NA	NA	NA
AZV82929.1|2256760_2257135_+	hypothetical protein	NA	NA	NA	NA	NA
AZV82930.1|2257131_2258082_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84606.1|2258180_2259578_-	rRNA methyltransferase	NA	NA	NA	NA	NA
AZV82931.1|2260234_2261200_+	riboflavin biosynthesis protein RibF	NA	NA	NA	NA	NA
AZV82932.1|2261189_2264051_+|tRNA	isoleucine--tRNA ligase	tRNA	A0A1V0SJ93	Klosneuvirus	25.5	1.0e-71
AZV82933.1|2264053_2264560_+	signal peptidase II	NA	NA	NA	NA	NA
AZV82934.1|2264664_2265873_+	phosphopantothenate synthase	NA	Q9HH70	Methanothermobacter_phage	30.0	3.8e-36
AZV82935.1|2265874_2266813_-	hypothetical protein	NA	NA	NA	NA	NA
AZV82936.1|2266974_2267448_+	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZV82937.1|2267444_2268395_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 20
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2353571	2427662	4108455	protease,transposase	uncultured_Caudovirales_phage(10.0%)	60	NA	NA
AZV83011.1|2353571_2354474_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83012.1|2354775_2355252_-	transcription elongation factor GreA	NA	NA	NA	NA	NA
AZV83013.1|2355875_2357513_+	methyl-accepting chemotaxis protein	NA	A0A2H4J162	uncultured_Caudovirales_phage	30.2	8.8e-12
AZV83014.1|2357543_2358857_-	pyrimidine utilization transport protein G	NA	Q9KX94	Enterobacteria_phage	67.1	2.1e-149
AZV84616.1|2359017_2359308_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83015.1|2359408_2360731_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83016.1|2360727_2361630_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83017.1|2361758_2362142_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83018.1|2362206_2363229_-	putative 2-aminoethylphosphonate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83019.1|2363257_2364088_-	phosphonoacetaldehyde hydrolase	NA	NA	NA	NA	NA
AZV84617.1|2364104_2365802_-	phosphonate ABC transporter permease	NA	NA	NA	NA	NA
AZV83020.1|2365866_2366943_-	sulfate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	35.8	1.2e-28
AZV83021.1|2367102_2367966_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83022.1|2367996_2368566_+	phosphohydrolase	NA	NA	NA	NA	NA
AZV83023.1|2368582_2369434_-	sulfurtransferase	NA	NA	NA	NA	NA
AZV83024.1|2370491_2371373_+|protease	zinc metalloprotease HtpX	protease	NA	NA	NA	NA
AZV83025.1|2371447_2372437_-	quinone oxidoreductase	NA	NA	NA	NA	NA
AZV83026.1|2372499_2373450_-	EamA family transporter	NA	NA	NA	NA	NA
AZV83027.1|2373512_2374370_+	EamA family transporter	NA	NA	NA	NA	NA
AZV83028.1|2374429_2374918_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83029.1|2376490_2377681_+	HlyD family secretion protein	NA	NA	NA	NA	NA
AZV83030.1|2377677_2379264_+	MFS transporter	NA	NA	NA	NA	NA
AZV83031.1|2379282_2380350_-	tartrate dehydrogenase	NA	NA	NA	NA	NA
AZV84618.1|2380454_2381984_-	DNA-binding protein	NA	A0A1X9I5H2	Streptococcus_phage	25.4	3.0e-14
AZV83032.1|2382418_2383993_+	peptide ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83033.1|2384100_2385117_+	ABC transporter permease	NA	NA	NA	NA	NA
AZV83034.1|2385113_2385953_+	ABC transporter permease	NA	NA	NA	NA	NA
AZV83035.1|2385963_2387595_+	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	30.6	2.7e-21
AZV83036.1|2387591_2388542_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83037.1|2388684_2389959_+	4-aminobutyrate transaminase	NA	A0A1V0SKB7	Klosneuvirus	27.9	1.6e-24
AZV83038.1|2389988_2390279_+	cupin	NA	NA	NA	NA	NA
AZV84619.1|2390351_2391365_+	acetylpolyamine amidohydrolase	NA	A0A2K9L4C2	Tupanvirus	35.2	1.7e-42
AZV83039.1|2391384_2392647_+	Zn-dependent hydrolase	NA	NA	NA	NA	NA
AZV83040.1|2392649_2393573_+	EamA family transporter	NA	NA	NA	NA	NA
AZV83041.1|2393569_2395063_+	aldehyde dehydrogenase PuuC	NA	NA	NA	NA	NA
AZV83042.1|2395073_2396006_-	glyoxylate/hydroxypyruvate reductase A	NA	NA	NA	NA	NA
AZV83043.1|2396223_2397513_+	aspartate aminotransferase family protein	NA	A0A1C9EHH3	Mycobacterium_phage	22.5	1.8e-07
AZV84620.1|2397547_2398891_-	sodium:alanine symporter family protein	NA	NA	NA	NA	NA
AZV83044.1|2398963_2400484_-	ATP-binding protein	NA	A0A248XCZ8	Klebsiella_phage	44.9	1.7e-78
AZV83045.1|2400638_2401370_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83046.1|2401467_2402778_+	phosphoribosylamine--glycine ligase	NA	NA	NA	NA	NA
AZV83047.1|2402793_2403705_+	coproporphyrinogen III oxidase	NA	NA	NA	NA	NA
AZV84621.1|2403701_2404289_+	nicotinate (nicotinamide) nucleotide adenylyltransferase	NA	NA	NA	NA	NA
AZV83048.1|2404350_2404737_+	ribosome silencing factor	NA	NA	NA	NA	NA
AZV83049.1|2404748_2405219_+	23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH	NA	NA	NA	NA	NA
AZV83050.1|2405230_2405854_+	septum formation protein Maf	NA	NA	NA	NA	NA
AZV83051.1|2405874_2408622_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZV83052.1|2414898_2415114_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83053.1|2415100_2416051_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83054.1|2416094_2417558_+	ribonuclease E/G	NA	NA	NA	NA	NA
AZV83055.1|2417591_2418494_-	prephenate dehydratase	NA	NA	NA	NA	NA
AZV83056.1|2418490_2419036_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83057.1|2419119_2420619_+	MFS transporter	NA	NA	NA	NA	NA
AZV83058.1|2420591_2422367_-	lipid A export permease/ATP-binding protein MsbA	NA	W8CYL7	Bacillus_phage	29.5	4.0e-50
AZV83059.1|2422478_2423444_+	heptosyltransferase	NA	NA	NA	NA	NA
AZV83060.1|2423456_2424221_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83061.1|2424225_2424498_+	zinc/iron-chelating domain-containing protein	NA	NA	NA	NA	NA
AZV83062.1|2424622_2425777_-	transferase	NA	NA	NA	NA	NA
AZV83063.1|2425751_2426459_-	polysaccharide deacetylase	NA	NA	NA	NA	NA
AZV83064.1|2426759_2427662_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 21
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2689085	2729706	4108455	transposase,tRNA	Salmonella_phage(33.33%)	41	NA	NA
AZV83286.1|2689085_2689988_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83287.1|2690146_2690329_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83288.1|2690428_2691022_-	twin-arginine translocation pathway signal	NA	NA	NA	NA	NA
AZV83289.1|2691208_2692300_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83290.1|2692799_2693210_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV83291.1|2693268_2693598_-	integration host factor subunit alpha	NA	A0A0H3UZA0	Geobacillus_virus	42.2	2.7e-13
AZV83292.1|2693615_2696033_-|tRNA	phenylalanine--tRNA ligase subunit beta	tRNA	NA	NA	NA	NA
AZV83293.1|2696045_2697068_-|tRNA	phenylalanine--tRNA ligase subunit alpha	tRNA	A0A2H4UW22	Bodo_saltans_virus	38.6	1.0e-26
AZV83294.1|2697142_2697502_-	50S ribosomal protein L20	NA	NA	NA	NA	NA
AZV83295.1|2697517_2697715_-	50S ribosomal protein L35	NA	NA	NA	NA	NA
AZV83296.1|2698050_2698953_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83297.1|2699195_2699645_+	deoxyuridine 5'-triphosphate nucleotidohydrolase	NA	S4TNT3	Salmonella_phage	67.2	3.7e-45
AZV83298.1|2699641_2700592_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83299.1|2700702_2702151_+	2-aminoadipate aminotransferase	NA	NA	NA	NA	NA
AZV83300.1|2702265_2702511_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83301.1|2702698_2703601_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83302.1|2703845_2704559_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZV83303.1|2704681_2704909_-	GNAT family N-acetyltransferase	NA	NA	NA	NA	NA
AZV83304.1|2705203_2705842_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83305.1|2705950_2706985_+	hydrolase	NA	NA	NA	NA	NA
AZV83306.1|2706981_2707884_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83307.1|2708347_2708872_-	DNA-binding protein	NA	J9Q7G7	Salmonella_phage	32.9	6.5e-09
AZV83308.1|2709343_2710405_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZV83309.1|2710488_2712123_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.1	2.9e-15
AZV83310.1|2712124_2712928_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AZV83311.1|2712956_2713916_-	ABC transporter	NA	NA	NA	NA	NA
AZV83312.1|2713919_2715434_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83313.1|2715470_2716475_-	peptidase M20	NA	NA	NA	NA	NA
AZV83314.1|2716906_2717377_-	histidine kinase	NA	NA	NA	NA	NA
AZV83315.1|2717412_2718024_-	RhtB family transporter	NA	NA	NA	NA	NA
AZV83316.1|2718054_2718678_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV83317.1|2718758_2720291_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83318.1|2720325_2721543_-	MFS transporter	NA	NA	NA	NA	NA
AZV83319.1|2721610_2722642_-	alcohol dehydrogenase	NA	A0A2K9L339	Tupanvirus	27.8	1.8e-26
AZV83320.1|2722638_2723808_-	amine oxidase	NA	NA	NA	NA	NA
AZV83321.1|2723801_2724482_-	anti-sigma factor	NA	NA	NA	NA	NA
AZV83322.1|2724643_2725486_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83323.1|2725648_2726620_-	AraC family transcriptional regulator	NA	NA	NA	NA	NA
AZV83324.1|2726791_2727670_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83325.1|2727692_2728763_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83326.1|2728803_2729706_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 22
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2785219	2858088	4108455	transposase,tRNA	Moraxella_phage(16.67%)	59	NA	NA
AZV83371.1|2785219_2785636_-|tRNA	aminoacyl-tRNA hydrolase	tRNA	NA	NA	NA	NA
AZV83372.1|2785746_2786379_+	7-carboxy-7-deazaguanine synthase	NA	NA	NA	NA	NA
AZV83373.1|2786407_2786851_+	6-carboxytetrahydropterin synthase QueD	NA	NA	NA	NA	NA
AZV83374.1|2786872_2787964_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV84643.1|2788018_2788807_-	aldolase	NA	NA	NA	NA	NA
AZV83375.1|2788954_2789575_+	XRE family transcriptional regulator	NA	NA	NA	NA	NA
AZV83376.1|2789714_2790188_+	MarR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83377.1|2791327_2792278_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83378.1|2792274_2799936_-	adhesin	NA	A0A0R6PJK4	Moraxella_phage	30.9	7.3e-24
AZV83379.1|2800176_2804223_-	phosphoribosylformylglycinamidine synthase	NA	A9YX36	Burkholderia_phage	67.4	6.3e-160
AZV83380.1|2804580_2805117_+	TRAP transporter small permease protein	NA	NA	NA	NA	NA
AZV83381.1|2805113_2806412_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZV83382.1|2806491_2807520_+	C4-dicarboxylate ABC transporter	NA	NA	NA	NA	NA
AZV83383.1|2807827_2808730_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83384.1|2808726_2809677_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83385.1|2809993_2810599_+	fimbrial protein	NA	NA	NA	NA	NA
AZV83386.1|2810652_2811966_-	phenylacetate--CoA ligase	NA	NA	NA	NA	NA
AZV83387.1|2812040_2812511_-	phenylacetic acid degradation protein PaaD	NA	NA	NA	NA	NA
AZV83388.1|2812510_2813299_-	2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase	NA	NA	NA	NA	NA
AZV83389.1|2813309_2814962_-	phenylacetic acid degradation protein PaaN	NA	NA	NA	NA	NA
AZV83390.1|2815049_2815952_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84644.1|2817161_2817668_-	phenylacetate-CoA oxygenase subunit PaaJ	NA	NA	NA	NA	NA
AZV83391.1|2817664_2818429_-	phenylacetate-CoA oxygenase subunit PaaI	NA	NA	NA	NA	NA
AZV83392.1|2818444_2818729_-	1,2-phenylacetyl-CoA epoxidase subunit B	NA	NA	NA	NA	NA
AZV83393.1|2818793_2819783_-	1,2-phenylacetyl-CoA epoxidase subunit A	NA	NA	NA	NA	NA
AZV83394.1|2819954_2820884_+	phenylacetic acid degradation operon negative regulatory protein PaaX	NA	NA	NA	NA	NA
AZV83395.1|2820855_2821542_-	NAD(P)H-hydrate epimerase	NA	NA	NA	NA	NA
AZV83396.1|2821575_2822121_-	oligoribonuclease	NA	Q8B5Y0	Diachasmimorpha_longicaudata_entomopoxvirus	37.7	2.1e-26
AZV83397.1|2822165_2823431_+	peptidase M48	NA	NA	NA	NA	NA
AZV83398.1|2823427_2824330_+	ribosome small subunit-dependent GTPase A	NA	NA	NA	NA	NA
AZV83399.1|2825511_2826456_-	peptide ABC transporter	NA	NA	NA	NA	NA
AZV83400.1|2826550_2828068_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83401.1|2828109_2829738_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZV83402.1|2829845_2830727_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83403.1|2830987_2831215_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83404.1|2833839_2834214_+	endonuclease	NA	F4YXR7	Roseobacter_phage	54.4	2.1e-25
AZV83405.1|2834238_2834577_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV83406.1|2834620_2836255_-	NAD+ synthase	NA	A0A2L0UZF5	Agrobacterium_phage	36.6	8.3e-87
AZV83407.1|2836293_2837640_-	mechanosensitive ion channel protein MscS	NA	NA	NA	NA	NA
AZV84645.1|2837747_2839169_+	argininosuccinate lyase	NA	NA	NA	NA	NA
AZV83408.1|2839238_2839823_-	nitroreductase	NA	NA	NA	NA	NA
AZV83409.1|2839925_2840876_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83410.1|2841010_2842117_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83411.1|2842127_2843225_+	cyclic pyranopterin phosphate synthase	NA	NA	NA	NA	NA
AZV83412.1|2843369_2844575_-	molybdopterin molybdenumtransferase MoeA	NA	NA	NA	NA	NA
AZV83413.1|2844581_2845103_-	molybdenum cofactor biosynthesis protein B	NA	NA	NA	NA	NA
AZV84646.1|2845099_2845582_-	molybdenum cofactor biosynthesis protein MoaE	NA	NA	NA	NA	NA
AZV83414.1|2845587_2845839_-	molybdopterin synthase sulfur carrier subunit	NA	NA	NA	NA	NA
AZV83415.1|2845819_2846305_-	molybdenum cofactor biosynthesis protein C	NA	NA	NA	NA	NA
AZV83416.1|2846440_2849902_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83417.1|2849919_2850804_+	carboxymethylenebutenolidase	NA	NA	NA	NA	NA
AZV83418.1|2850813_2851245_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84647.1|2851491_2851995_+	peroxiredoxin	NA	M1I839	Pelagibacter_phage	44.1	1.8e-24
AZV83419.1|2852072_2853473_+	MFS transporter	NA	NA	NA	NA	NA
AZV83420.1|2853547_2854423_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84648.1|2854419_2855427_-	biotin synthase BioB	NA	NA	NA	NA	NA
AZV83421.1|2855894_2856200_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83422.1|2856290_2856881_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84649.1|2857071_2858088_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
>prophage 23
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2861279	2928041	4108455	protease,transposase	uncultured_Mediterranean_phage(28.57%)	51	NA	NA
AZV83425.1|2861279_2862182_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83426.1|2862280_2863231_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83427.1|2863227_2864022_-	N-formylglutamate deformylase	NA	NA	NA	NA	NA
AZV83428.1|2864053_2864758_-	3-oxoacyl-ACP reductase	NA	NA	NA	NA	NA
AZV83429.1|2864832_2865633_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83430.1|2865629_2866037_-	cytochrome o ubiquinol oxidase subunit IV	NA	NA	NA	NA	NA
AZV83431.1|2866033_2866675_-	cytochrome o ubiquinol oxidase subunit III	NA	NA	NA	NA	NA
AZV84650.1|2866667_2868668_-	cytochrome o ubiquinol oxidase subunit I	NA	NA	NA	NA	NA
AZV83432.1|2869928_2871260_+	arabinose ABC transporter permease	NA	NA	NA	NA	NA
AZV83433.1|2871256_2872159_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83434.1|2873913_2874180_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83435.1|2874887_2875226_+	transcriptional regulator	NA	NA	NA	NA	NA
AZV83436.1|2876554_2878834_-	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZV83437.1|2878811_2879516_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83438.1|2879778_2880381_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83439.1|2880477_2881767_+	MFS transporter	NA	NA	NA	NA	NA
AZV83440.1|2881824_2882556_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	31.0	1.4e-12
AZV83441.1|2882552_2883356_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	23.5	7.9e-14
AZV83442.1|2883352_2884441_-	ABC transporter ATP-binding protein	NA	NA	NA	NA	NA
AZV83443.1|2884437_2885367_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV83444.1|2885515_2886661_-	branched chain amino acid ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83445.1|2886682_2887585_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83446.1|2887963_2891785_-	trifunctional transcriptional regulator/proline dehydrogenase/L-glutamate gamma-semialdehyde dehydrogenase	NA	NA	NA	NA	NA
AZV83447.1|2891941_2892610_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83448.1|2892614_2894288_-	paraquat-inducible protein B	NA	NA	NA	NA	NA
AZV83449.1|2894306_2895626_-	paraquat-inducible membrane protein A	NA	NA	NA	NA	NA
AZV83450.1|2895630_2897946_-|protease	ATP-dependent Clp protease ATP-binding subunit ClpA	protease	A0A223W0B1	Agrobacterium_phage	41.9	4.1e-164
AZV84651.1|2898001_2900170_-	penicillin-binding protein 1C	NA	NA	NA	NA	NA
AZV84652.1|2900166_2904732_-	alpha-2-macroglobulin	NA	NA	NA	NA	NA
AZV83451.1|2905445_2905760_-|protease	ATP-dependent Clp protease adapter ClpS	protease	A0A1B1IT64	uncultured_Mediterranean_phage	43.8	1.2e-10
AZV83452.1|2905987_2906233_+	cold-shock protein	NA	A0A2H4N7Y6	Lake_Baikal_phage	76.6	1.3e-20
AZV83453.1|2906354_2906846_+	hypothetical protein	NA	A0A1B1IUW8	uncultured_Mediterranean_phage	42.2	4.8e-14
AZV83454.1|2906945_2908151_-	3-oxoadipyl-CoA thiolase	NA	NA	NA	NA	NA
AZV83455.1|2908266_2909664_-	chloride channel protein EriC	NA	NA	NA	NA	NA
AZV83456.1|2909780_2910359_-	superoxide dismutase	NA	NA	NA	NA	NA
AZV83457.1|2910431_2911823_-	exodeoxyribonuclease VII large subunit	NA	A0A1V0SD82	Indivirus	32.0	1.4e-29
AZV83458.1|2911990_2912941_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83459.1|2913221_2913842_+	flagellar motor protein MotA	NA	NA	NA	NA	NA
AZV83460.1|2913838_2914252_+	biopolymer transporter ExbD	NA	NA	NA	NA	NA
AZV83461.1|2914248_2915292_+	tetraacyldisaccharide 4'-kinase	NA	NA	NA	NA	NA
AZV83462.1|2915347_2915536_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83463.1|2915545_2916310_+	3-deoxy-manno-octulosonate cytidylyltransferase	NA	NA	NA	NA	NA
AZV83464.1|2916400_2917057_+	adenylate kinase	NA	NA	NA	NA	NA
AZV83465.1|2917148_2917907_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV83466.1|2917932_2919534_+	murein biosynthesis integral membrane protein MurJ	NA	NA	NA	NA	NA
AZV83467.1|2919734_2920739_+	iron dicitrate transport regulator FecR	NA	NA	NA	NA	NA
AZV83468.1|2920839_2921103_+	30S ribosomal protein S20	NA	NA	NA	NA	NA
AZV83469.1|2921220_2921997_-	2-dehydro-3-deoxyglucarate aldolase	NA	NA	NA	NA	NA
AZV83470.1|2922587_2923538_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83471.1|2925921_2927034_-	malate dehydrogenase	NA	NA	NA	NA	NA
AZV83472.1|2927090_2928041_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 24
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	2950420	2997615	4108455	transposase	Staphylococcus_phage(33.33%)	41	NA	NA
AZV83495.1|2950420_2951284_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83496.1|2951479_2952952_-	magnesium transporter	NA	NA	NA	NA	NA
AZV83497.1|2952962_2953373_-	acyl-CoA thioesterase	NA	NA	NA	NA	NA
AZV83498.1|2953436_2954483_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83499.1|2954589_2955468_+	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83500.1|2955481_2956678_-	amidohydrolase	NA	NA	NA	NA	NA
AZV83501.1|2956739_2958431_+	long-chain fatty acid--CoA ligase	NA	A0A2H4PQU7	Staphylococcus_phage	28.1	9.4e-33
AZV83502.1|2958427_2959330_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83503.1|2959498_2960395_-	inositol monophosphatase	NA	NA	NA	NA	NA
AZV83504.1|2962672_2964898_+	glycosyl hydrolase	NA	NA	NA	NA	NA
AZV83505.1|2965062_2966151_+	phosphate ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	36.4	8.7e-32
AZV83506.1|2966107_2966761_+	DL-methionine transporter permease subunit	NA	NA	NA	NA	NA
AZV83507.1|2966808_2967606_+	metal ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83508.1|2968184_2969087_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83509.1|2969167_2970316_+	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZV83510.1|2970372_2971323_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83511.1|2971421_2971727_-	antibiotic biosynthesis monooxygenase	NA	NA	NA	NA	NA
AZV83512.1|2971755_2972190_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83513.1|2972191_2973436_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83514.1|2973432_2974143_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84654.1|2974157_2975069_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83515.1|2975431_2975836_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83516.1|2975832_2976291_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83517.1|2976297_2977206_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84655.1|2977202_2978069_+	ABC transporter permease	NA	NA	NA	NA	NA
AZV83518.1|2978055_2978883_+	sugar ABC transporter permease	NA	NA	NA	NA	NA
AZV83519.1|2978893_2980021_+	phosphate ABC transporter ATP-binding protein	NA	G3M9Y6	Bacillus_virus	32.3	1.2e-23
AZV83520.1|2982378_2983641_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83521.1|2983647_2984400_+	DNA-binding protein	NA	NA	NA	NA	NA
AZV83522.1|2984451_2984637_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83523.1|2984912_2985377_+	redox-sensitive transcriptional activator SoxR	NA	NA	NA	NA	NA
AZV83524.1|2985456_2986068_+	3-methyladenine DNA glycosylase	NA	NA	NA	NA	NA
AZV83525.1|2986212_2988321_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83526.1|2988317_2989220_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83527.1|2989371_2989992_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84656.1|2990095_2990836_+	oxidoreductase	NA	NA	NA	NA	NA
AZV83528.1|2991970_2993095_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83529.1|2993140_2993509_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83530.1|2993750_2994653_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83531.1|2995736_2996279_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83532.1|2996712_2997615_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 25
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	3186582	3247516	4108455	transposase	Xanthomonas_phage(50.0%)	49	NA	NA
AZV83688.1|3186582_3187485_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83689.1|3187493_3188042_+	phospholipid:lipid A palmitoyltransferase	NA	NA	NA	NA	NA
AZV83690.1|3188038_3188647_-	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZV84665.1|3188829_3189288_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV83691.1|3189306_3190563_-	amino acid dehydrogenase	NA	NA	NA	NA	NA
AZV83692.1|3190618_3191431_-	oxidoreductase	NA	NA	NA	NA	NA
AZV83693.1|3191545_3192100_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZV83694.1|3192109_3193099_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83695.1|3193278_3193998_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83696.1|3194014_3196750_-	preprotein translocase subunit SecA	NA	NA	NA	NA	NA
AZV84666.1|3196929_3197916_-	peptidase M23	NA	A0A292GJG6	Xanthomonas_phage	51.8	3.4e-27
AZV83697.1|3198044_3198452_+	flagellar hook-length control protein FliK	NA	NA	NA	NA	NA
AZV83698.1|3198563_3199487_-	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase	NA	NA	NA	NA	NA
AZV83699.1|3199715_3200900_-	cell division protein FtsZ	NA	NA	NA	NA	NA
AZV83700.1|3201088_3202315_-	cell division protein FtsA	NA	NA	NA	NA	NA
AZV83701.1|3202319_3203141_-	cell division protein FtsQ	NA	NA	NA	NA	NA
AZV83702.1|3203153_3204104_-	D-alanine--D-alanine ligase	NA	NA	NA	NA	NA
AZV83703.1|3204100_3205507_-	UDP-N-acetylmuramate--L-alanine ligase	NA	NA	NA	NA	NA
AZV83704.1|3205503_3206577_-	undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase	NA	NA	NA	NA	NA
AZV83705.1|3206573_3207767_-	putative lipid II flippase FtsW	NA	NA	NA	NA	NA
AZV83706.1|3207763_3209296_-	UDP-N-acetylmuramoylalanine--D-glutamate ligase	NA	NA	NA	NA	NA
AZV83707.1|3209292_3210462_-	phospho-N-acetylmuramoyl-pentapeptide- transferase	NA	NA	NA	NA	NA
AZV83708.1|3210451_3213289_-	UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase	NA	NA	NA	NA	NA
AZV83709.1|3213285_3215016_-	cell division protein	NA	NA	NA	NA	NA
AZV83710.1|3215012_3215291_-	cell division protein FtsL	NA	NA	NA	NA	NA
AZV83711.1|3215290_3216385_-	16S rRNA (cytosine(1402)-N(4))-methyltransferase	NA	NA	NA	NA	NA
AZV84667.1|3216393_3216822_-	cell division/cell wall cluster transcriptional repressor MraZ	NA	NA	NA	NA	NA
AZV83712.1|3217624_3219433_+	ABC transporter ATP-binding protein	NA	A0A1B0RXA0	Streptococcus_phage	28.6	1.6e-43
AZV83713.1|3219472_3220552_-	dihydroorotase	NA	NA	NA	NA	NA
AZV83714.1|3220548_3221742_-	peptidase M20	NA	NA	NA	NA	NA
AZV83715.1|3221891_3222170_+	DNA topoisomerase III	NA	NA	NA	NA	NA
AZV83716.1|3222499_3222865_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84668.1|3229616_3230093_-	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZV83717.1|3230245_3231358_+	4-hydroxyphenylpyruvate dioxygenase	NA	NA	NA	NA	NA
AZV83718.1|3231425_3231986_-	peptide-methionine (S)-S-oxide reductase	NA	NA	NA	NA	NA
AZV83719.1|3232009_3232342_-	cytochrome C	NA	NA	NA	NA	NA
AZV83720.1|3232325_3234014_-	dihydroxy-acid dehydratase	NA	NA	NA	NA	NA
AZV83721.1|3234133_3234922_+	prolipoprotein diacylglyceryl transferase	NA	NA	NA	NA	NA
AZV83722.1|3235629_3236580_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83723.1|3237024_3237336_-	cell division protein ZapA	NA	NA	NA	NA	NA
AZV83724.1|3237335_3237866_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83725.1|3238076_3238979_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83726.1|3239077_3240028_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83727.1|3240317_3240782_+	tricarboxylate transporter	NA	NA	NA	NA	NA
AZV83728.1|3240796_3242302_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83729.1|3242558_3244163_+	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZV83730.1|3244218_3245124_+	oxidoreductase	NA	NA	NA	NA	NA
AZV83731.1|3245564_3246467_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83732.1|3246613_3247516_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 26
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	3270613	3321159	4108455	transposase,tRNA	Tupanvirus(14.29%)	40	NA	NA
AZV83757.1|3270613_3271516_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83758.1|3271580_3272552_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83759.1|3272615_3273635_-	acetylpolyamine amidohydrolase	NA	A0A2K9L473	Tupanvirus	31.7	3.4e-22
AZV83760.1|3273636_3274977_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84670.1|3275287_3275968_-	5-formyltetrahydrofolate cyclo-ligase	NA	NA	NA	NA	NA
AZV84671.1|3276043_3278107_+	lytic transglycosylase	NA	A0A0S2SXL7	Bacillus_phage	36.6	5.3e-14
AZV83761.1|3278103_3279198_+|tRNA	CCA tRNA nucleotidyltransferase	tRNA	A0A0F6YPT7	Sinorhizobium_phage	50.5	2.4e-50
AZV83762.1|3279212_3280403_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83763.1|3280491_3282180_-	RNA helicase	NA	Q5GF26	Diachasmimorpha_longicaudata_entomopoxvirus	32.9	1.6e-48
AZV83764.1|3282454_3283207_-	uracil-DNA glycosylase	NA	A0A1Y0B680	Bovine_alphaherpesvirus	47.5	2.5e-46
AZV83765.1|3283345_3284296_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84672.1|3284608_3286087_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83766.1|3286093_3287203_-	molybdenum ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	34.5	7.5e-23
AZV83767.1|3287214_3287895_-	molybdenum ABC transporter permease subunit	NA	NA	NA	NA	NA
AZV83768.1|3287916_3288672_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83769.1|3288807_3289710_-	hydrolase	NA	NA	NA	NA	NA
AZV83770.1|3289779_3290361_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83771.1|3290453_3290576_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83772.1|3290621_3290921_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83773.1|3291072_3291552_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84673.1|3291567_3291933_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83774.1|3293704_3294133_-	AsnC family transcriptional regulator	NA	NA	NA	NA	NA
AZV83775.1|3294223_3295174_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83776.1|3295701_3296475_-	molybdate ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83777.1|3296607_3297618_-	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZV83778.1|3297769_3299425_-	gamma-glutamyltransferase	NA	NA	NA	NA	NA
AZV83779.1|3299479_3299821_-	cupin	NA	NA	NA	NA	NA
AZV83780.1|3299834_3301274_-	amine oxidase	NA	NA	NA	NA	NA
AZV83781.1|3301406_3302222_-	MerR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83782.1|3302463_3303366_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83783.1|3304759_3305701_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83784.1|3305927_3306668_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83785.1|3306753_3307656_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83786.1|3309145_3310717_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV83787.1|3312946_3315511_+	autotransporter outer membrane beta-barrel domain-containing protein	NA	NA	NA	NA	NA
AZV83788.1|3317663_3317948_-	hypothetical protein	NA	A0A1V0SIN4	Klosneuvirus	34.1	6.8e-05
AZV83789.1|3318029_3318941_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83790.1|3319010_3319256_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83791.1|3319484_3319742_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83792.1|3320256_3321159_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 27
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	3384207	3437852	4108455	transposase	Staphylococcus_phage(33.33%)	48	NA	NA
AZV83836.1|3384207_3385110_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83837.1|3385514_3386159_-	urease accessory protein UreG	NA	NA	NA	NA	NA
AZV83838.1|3386183_3386768_-	urease accessory protein UreF	NA	NA	NA	NA	NA
AZV83839.1|3386868_3387486_-	urease accessory protein UreE	NA	NA	NA	NA	NA
AZV83840.1|3387488_3389204_-	urease subunit alpha	NA	NA	NA	NA	NA
AZV83841.1|3389200_3389509_-	urease subunit beta	NA	NA	NA	NA	NA
AZV84678.1|3389525_3390143_-	urease accessory protein UreJ	NA	NA	NA	NA	NA
AZV83842.1|3390187_3390490_-	urease subunit gamma	NA	NA	NA	NA	NA
AZV83843.1|3390590_3391445_-	urease accessory protein	NA	NA	NA	NA	NA
AZV83844.1|3392716_3393124_-	aldehyde-activating protein	NA	NA	NA	NA	NA
AZV83845.1|3393493_3394288_-	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83846.1|3394388_3395624_+	methylaspartate ammonia-lyase	NA	NA	NA	NA	NA
AZV83847.1|3395692_3396709_+	LacI family transcriptional regulator	NA	NA	NA	NA	NA
AZV83848.1|3396720_3398097_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83849.1|3398093_3399290_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83850.1|3399286_3400825_-	SpoVR family protein	NA	NA	NA	NA	NA
AZV83851.1|3400821_3402081_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83852.1|3404021_3404924_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83853.1|3405738_3406833_-	CoA transferase	NA	NA	NA	NA	NA
AZV83854.1|3406825_3408160_-	CoA ligase	NA	NA	NA	NA	NA
AZV83855.1|3408113_3408797_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83856.1|3408822_3409986_-	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV83857.1|3409982_3410984_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV83858.1|3410983_3411856_-	branched-chain amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV83859.1|3411852_3412602_-	ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.8	1.9e-09
AZV83860.1|3412598_3413390_-	ABC transporter ATP-binding protein	NA	A0A1M7XV31	Cedratvirus	29.4	1.7e-08
AZV83861.1|3413386_3414526_-	ABC transporter	NA	NA	NA	NA	NA
AZV83862.1|3414801_3415587_+	3-hydroxyacyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV83863.1|3415620_3416403_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV83864.1|3416406_3416796_+	DNA-binding protein	NA	NA	NA	NA	NA
AZV83865.1|3417935_3418799_+	3-alpha,7-alpha, 12-alpha-trihydroxy-5-beta-cholest-24-enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV83866.1|3418834_3419923_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83867.1|3419919_3420822_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83868.1|3421223_3424202_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83869.1|3425128_3426007_+	fatty acid desaturase	NA	NA	NA	NA	NA
AZV83870.1|3426042_3426375_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83871.1|3426353_3427874_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83872.1|3427955_3428906_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83873.1|3428902_3429370_-	ribonuclease HI	NA	J9Q745	Salmonella_phage	50.7	5.6e-36
AZV83874.1|3429412_3430183_-	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZV83875.1|3430203_3431004_+	hydroxyacylglutathione hydrolase	NA	NA	NA	NA	NA
AZV83876.1|3431014_3432424_+	lytic transglycosylase	NA	NA	NA	NA	NA
AZV83877.1|3432518_3433304_+	enoyl-[acyl-carrier-protein] reductase	NA	NA	NA	NA	NA
AZV84679.1|3433543_3434560_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV83878.1|3434667_3435060_-	osmotically inducible protein OsmC	NA	NA	NA	NA	NA
AZV83879.1|3435197_3435878_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83880.1|3435882_3436854_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83881.1|3436949_3437852_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 28
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	3444054	3503306	4108455	transposase,tRNA	Acinetobacter_phage(27.27%)	50	NA	NA
AZV83886.1|3444054_3445818_+|tRNA	glutamine--tRNA ligase	tRNA	A0A222YZ70	Escherichia_phage	50.0	5.0e-162
AZV83887.1|3445929_3446808_+	septum site-determining protein MinC	NA	NA	NA	NA	NA
AZV83888.1|3446920_3447736_+	septum site-determining protein MinD	NA	NA	NA	NA	NA
AZV83889.1|3447739_3447991_+	cell division topological specificity factor MinE	NA	NA	NA	NA	NA
AZV84680.1|3448075_3449092_-|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV83890.1|3449422_3449644_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84681.1|3452004_3452871_-	EamA family transporter	NA	NA	NA	NA	NA
AZV83891.1|3453419_3454628_-	ABC transporter permease	NA	NA	NA	NA	NA
AZV83892.1|3454707_3456279_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83893.1|3456396_3457332_-	glycosyl transferase	NA	NA	NA	NA	NA
AZV83894.1|3457520_3458465_+	LysR family transcriptional regulator	NA	A0A2P0ZL89	Lactobacillus_phage	23.2	8.4e-07
AZV83895.1|3458533_3458704_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83896.1|3459032_3464750_+	excinuclease ABC subunit A	NA	A0A1B1IVR3	uncultured_Mediterranean_phage	39.5	1.0e-195
AZV83897.1|3464755_3465883_+	aminodeoxychorismate synthase, component I	NA	S4VT78	Pandoravirus	37.8	3.8e-38
AZV83898.1|3465938_3466565_+	aminotransferase	NA	NA	NA	NA	NA
AZV84682.1|3466836_3467853_+|transposase	IS110 family transposase	transposase	NA	NA	NA	NA
AZV83899.1|3467948_3468659_-	short-chain dehydrogenase	NA	NA	NA	NA	NA
AZV84683.1|3468655_3469645_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV83900.1|3469740_3471372_+	acyl-CoA synthetase	NA	NA	NA	NA	NA
AZV83901.1|3471374_3472112_+	GntR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83902.1|3472267_3473140_-|tRNA	tRNA threonylcarbamoyladenosine dehydratase	tRNA	NA	NA	NA	NA
AZV83903.1|3473489_3474629_+	MFS transporter	NA	NA	NA	NA	NA
AZV83904.1|3474625_3475285_+	gamma-glutamylcyclotransferase	NA	NA	NA	NA	NA
AZV83905.1|3475356_3475989_+	pyridoxamine 5'-phosphate oxidase	NA	NA	NA	NA	NA
AZV83906.1|3476018_3476537_+	flavin reductase	NA	NA	NA	NA	NA
AZV83907.1|3476547_3477657_+	FAD-dependent oxidoreductase	NA	NA	NA	NA	NA
AZV83908.1|3477703_3478558_+	formyltetrahydrofolate deformylase	NA	NA	NA	NA	NA
AZV83909.1|3478559_3479462_-	LysR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83910.1|3480684_3481635_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83911.1|3481733_3482867_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83912.1|3482903_3483152_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83913.1|3483391_3484381_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83914.1|3484556_3485345_-	indole-3-glycerol-phosphate synthase	NA	A0A0P0IR83	Acinetobacter_phage	53.0	5.1e-66
AZV83915.1|3485341_3486373_-	anthranilate phosphoribosyltransferase	NA	A0A0N7IRD9	Acinetobacter_phage	42.7	7.4e-73
AZV83916.1|3486391_3486955_-	anthranilate/aminodeoxychorismate synthase component II	NA	A0A0P0IKJ1	Acinetobacter_phage	62.1	1.1e-65
AZV83917.1|3487010_3488531_-	anthranilate synthase component I	NA	S4VT78	Pandoravirus	32.1	9.0e-43
AZV83918.1|3488794_3489499_-	phosphoglycolate phosphatase	NA	NA	NA	NA	NA
AZV83919.1|3489506_3490235_-	ribulose-phosphate 3-epimerase	NA	NA	NA	NA	NA
AZV83920.1|3490349_3490724_+	Co2+/Mg2+ efflux protein ApaG	NA	NA	NA	NA	NA
AZV83921.1|3490766_3492056_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83922.1|3492052_3493222_+	ubiquinone biosynthesis protein UbiH	NA	NA	NA	NA	NA
AZV83923.1|3493248_3494058_+	disulfide bond formation protein DsbC	NA	NA	NA	NA	NA
AZV83924.1|3494117_3495053_+	hydroxyacid dehydrogenase	NA	A0A1J0F959	Only_Syngen_Nebraska_virus	27.7	6.4e-15
AZV83925.1|3495065_3496016_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83926.1|3496114_3497077_-|tRNA	tRNA 2-thiocytidine(32) synthetase TtcA	tRNA	A0A0U2S5Z2	Escherichia_phage	64.5	4.6e-93
AZV83927.1|3497108_3497468_-	dihydroneopterin aldolase	NA	NA	NA	NA	NA
AZV83928.1|3497592_3498495_+	oxidoreductase	NA	G3MA85	Bacillus_virus	24.0	1.9e-08
AZV84684.1|3498496_3500263_-	peptidase M61	NA	NA	NA	NA	NA
AZV83929.1|3500303_3501080_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV83930.1|3502403_3503306_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 29
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	3518292	3576365	4108455	holin,transposase,tRNA	Catovirus(12.5%)	50	NA	NA
AZV83943.1|3518292_3519243_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83944.1|3519371_3520505_-	peptidase	NA	NA	NA	NA	NA
AZV83945.1|3520548_3521454_-	alpha/beta hydrolase	NA	NA	NA	NA	NA
AZV83946.1|3523153_3524074_-	peptide ABC transporter permease	NA	NA	NA	NA	NA
AZV83947.1|3524081_3525059_-	ABC transporter permease	NA	NA	NA	NA	NA
AZV83948.1|3525117_3526077_-	succinylglutamate desuccinylase	NA	NA	NA	NA	NA
AZV83949.1|3528126_3528363_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83950.1|3528489_3529353_-	NAD(P)H-hydrate dehydratase	NA	NA	NA	NA	NA
AZV83951.1|3529441_3530263_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV83952.1|3530342_3531080_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV83953.1|3531076_3532069_-	2-nitropropane dioxygenase	NA	NA	NA	NA	NA
AZV84687.1|3532221_3532845_+	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83954.1|3532889_3534038_+	acyl-CoA dehydrogenase	NA	NA	NA	NA	NA
AZV83955.1|3536409_3537312_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83956.1|3537652_3538603_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83957.1|3538749_3539652_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83958.1|3539948_3540446_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83959.1|3540488_3542264_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83960.1|3542271_3543138_+	copper resistance protein	NA	NA	NA	NA	NA
AZV83961.1|3543144_3543870_-	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV83962.1|3544039_3544270_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83963.1|3544307_3544529_+	hypothetical protein	NA	NA	NA	NA	NA
AZV83964.1|3545048_3545819_-	IclR family transcriptional regulator	NA	NA	NA	NA	NA
AZV83965.1|3546132_3546723_+	cysteine dioxygenase	NA	NA	NA	NA	NA
AZV83966.1|3546756_3548085_-	amidase	NA	NA	NA	NA	NA
AZV83967.1|3548159_3549305_-	transporter	NA	NA	NA	NA	NA
AZV83968.1|3549416_3550415_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83969.1|3550377_3550812_+	carbon monoxide dehydrogenase	NA	NA	NA	NA	NA
AZV83970.1|3552328_3553213_+	EamA family transporter	NA	NA	NA	NA	NA
AZV83971.1|3553209_3554415_-	cardiolipin synthase B	NA	NA	NA	NA	NA
AZV83972.1|3554411_3555272_-	endonuclease	NA	NA	NA	NA	NA
AZV83973.1|3555384_3557175_-|tRNA	aspartate--tRNA ligase	tRNA	A0A1V0SAC0	Catovirus	25.5	6.5e-08
AZV84688.1|3557215_3557860_-	hypothetical protein	NA	A0A2I7S9X1	Vibrio_phage	28.4	8.5e-11
AZV83974.1|3557881_3558190_-	FmdB family transcriptional regulator	NA	NA	NA	NA	NA
AZV84689.1|3558355_3559642_-	hypothetical protein	NA	NA	NA	NA	NA
AZV83975.1|3559768_3561028_-|holin	choline dehydrogenase	holin	A0A2I2L3D3	Orpheovirus	27.6	6.1e-13
AZV83976.1|3561075_3562026_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV83977.1|3563977_3565192_-	phosphoribosylglycinamide formyltransferase 2	NA	NA	NA	NA	NA
AZV83978.1|3565297_3566287_+	D-arabinose 5-phosphate isomerase	NA	A0A2P0VNK5	Tetraselmis_virus	37.7	4.3e-38
AZV83979.1|3566283_3566892_+	phenylphosphate carboxylase subunit delta	NA	E3T535	Cafeteria_roenbergensis_virus	26.1	5.2e-10
AZV83980.1|3566904_3567534_+	LPS export ABC transporter periplasmic protein LptC	NA	NA	NA	NA	NA
AZV83981.1|3567530_3568151_+	lipopolysaccharide transport periplasmic protein LptA	NA	NA	NA	NA	NA
AZV83982.1|3568182_3568974_+	LPS export ABC transporter ATP-binding protein	NA	A0A2H4PQG7	Staphylococcus_phage	27.4	9.5e-20
AZV83983.1|3569327_3569549_+	ribosomal subunit interface protein	NA	NA	NA	NA	NA
AZV83984.1|3569825_3570281_+	PTS sugar transporter subunit IIA	NA	NA	NA	NA	NA
AZV83985.1|3570299_3571226_+	HPr kinase/phosphorylase	NA	NA	NA	NA	NA
AZV83986.1|3571279_3572566_-	alcohol dehydrogenase	NA	NA	NA	NA	NA
AZV83987.1|3573496_3574369_+	RNase adaptor protein RapZ	NA	A0A1P8D5W0	Corynebacterium_phage	34.5	2.4e-08
AZV83988.1|3574365_3575316_+	hypothetical protein	NA	F5B3X9	Synechococcus_phage	47.2	6.9e-17
AZV83989.1|3575462_3576365_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
>prophage 31
CP018035	Bordetella pertussis strain H782 chromosome, complete genome	4108455	4030626	4084010	4108455	transposase	Planktothrix_phage(40.0%)	45	NA	NA
AZV84392.1|4030626_4031577_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84393.1|4031746_4032973_+	bifunctional ornithine acetyltransferase/N-acetylglutamate synthase	NA	NA	NA	NA	NA
AZV84394.1|4033172_4034039_+	AAA family ATPase	NA	NA	NA	NA	NA
AZV84395.1|4034031_4034994_+	NUDIX hydrolase	NA	A0A221LFJ1	Barns_Ness_breadcrumb_sponge_sobemo-like_virus	53.4	1.9e-06
AZV84396.1|4035094_4036045_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84397.1|4036191_4037094_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84398.1|4037240_4038143_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84399.1|4038139_4039633_-	RND transporter	NA	NA	NA	NA	NA
AZV84400.1|4039629_4042737_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZV84401.1|4042733_4045802_-	multidrug transporter subunit MdtC	NA	NA	NA	NA	NA
AZV84402.1|4045798_4047049_-	efflux transporter periplasmic adaptor subunit	NA	NA	NA	NA	NA
AZV84403.1|4047229_4047982_-	cell division protein ZapD	NA	NA	NA	NA	NA
AZV84716.1|4048023_4048668_-	dephospho-CoA kinase	NA	NA	NA	NA	NA
AZV84404.1|4048676_4049516_-	prepilin peptidase	NA	NA	NA	NA	NA
AZV84405.1|4049756_4050500_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84406.1|4050582_4050930_-	helix-turn-helix transcriptional regulator	NA	NA	NA	NA	NA
AZV84407.1|4051027_4051870_-	pantoate--beta-alanine ligase	NA	NA	NA	NA	NA
AZV84408.1|4051914_4052802_-	segregation/condensation protein A	NA	NA	NA	NA	NA
AZV84409.1|4052828_4053017_-	DUF3460 domain-containing protein	NA	NA	NA	NA	NA
AZV84410.1|4053114_4054572_+	MFS transporter	NA	NA	NA	NA	NA
AZV84411.1|4054558_4056085_+	glycerol kinase	NA	NA	NA	NA	NA
AZV84412.1|4056103_4056571_-	hypothetical protein	NA	NA	NA	NA	NA
AZV84413.1|4056570_4057593_-	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV84414.1|4057713_4058454_-	ABC transporter ATP-binding protein	NA	G9BWD6	Planktothrix_phage	39.7	4.4e-35
AZV84415.1|4058508_4059609_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV84416.1|4059610_4060801_-	amino acid ABC transporter permease	NA	NA	NA	NA	NA
AZV84417.1|4060920_4061937_-	amino acid ABC transporter substrate-binding protein	NA	A0A1B1IT51	uncultured_Mediterranean_phage	42.1	1.0e-71
AZV84418.1|4062255_4062927_+	cell division ATP-binding protein FtsE	NA	G9BWD6	Planktothrix_phage	38.2	9.5e-29
AZV84419.1|4062923_4063832_+	permease	NA	NA	NA	NA	NA
AZV84420.1|4064043_4064691_+	chemotaxis protein CheD	NA	NA	NA	NA	NA
AZV84717.1|4068551_4069619_+	A/G-specific adenine glycosylase	NA	NA	NA	NA	NA
AZV84421.1|4069629_4070439_-	transcriptional regulator	NA	NA	NA	NA	NA
AZV84422.1|4070528_4071302_+	SAM-dependent methyltransferase	NA	NA	NA	NA	NA
AZV84423.1|4071532_4072435_+|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
AZV84424.1|4072446_4073346_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84425.1|4073335_4074490_+	acyl-CoA transferase	NA	NA	NA	NA	NA
AZV84426.1|4074529_4075942_+	hypothetical protein	NA	NA	NA	NA	NA
AZV84427.1|4075964_4076933_+	ABC transporter substrate-binding protein	NA	NA	NA	NA	NA
AZV84428.1|4076934_4077759_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV84429.1|4077755_4078517_+	nitrobenzoate reductase	NA	M1I6Q5	Acanthocystis_turfacea_Chlorella_virus	31.0	2.0e-19
AZV84430.1|4078597_4079284_-	TetR family transcriptional regulator	NA	NA	NA	NA	NA
AZV84431.1|4079481_4080465_+	hydroxymethylglutaryl-CoA lyase	NA	NA	NA	NA	NA
AZV84432.1|4080461_4081241_+	enoyl-CoA hydratase	NA	NA	NA	NA	NA
AZV84718.1|4081328_4082561_+	CoA transferase	NA	NA	NA	NA	NA
AZV84433.1|4083107_4084010_-|transposase	IS481 family transposase	transposase	NA	NA	NA	NA
